Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,305,090 |
C→T |
D155N (GAC→AAC) |
deaD ← |
inducible ATP‑independent RNA helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,305,090 | 0 | C | T | 100.0%
| 722.1
/ NA
| 205 | D155N (GAC→AAC) | deaD | inducible ATP‑independent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (116/89); total (116/89) |
Only 100 of 214 total aligned reads displayed.
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGA > NC_000913/3305001‑3305178
|
gATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcag > 1:2590451/1‑93 (MQ=255)
gATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcag < 2:1552868/93‑1 (MQ=255)
gATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcag > 1:2833564/1‑93 (MQ=255)
ctGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagc < 1:4502922/92‑1 (MQ=255)
aTGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagc > 1:1360099/1‑93 (MQ=255)
aTGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagc > 1:149685/1‑93 (MQ=255)
aTGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagc < 2:3993337/93‑1 (MQ=255)
aTGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagc > 1:3634125/1‑93 (MQ=255)
aGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCCGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGAc < 1:3040869/93‑1 (MQ=255)
aGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGag > 2:1120368/1‑92 (MQ=255)
aGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGAc < 1:3574515/93‑1 (MQ=255)
aGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGAc > 1:755692/1‑93 (MQ=255)
gCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACg > 2:555667/1‑93 (MQ=255)
cccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACgg > 1:230532/1‑93 (MQ=255)
cATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGcc > 1:3117443/1‑93 (MQ=255)
cATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGcc > 1:838600/1‑93 (MQ=255)
cATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGcc > 1:2288822/1‑93 (MQ=255)
aaTGCGCAGCCTTTCGTCAGCTTCATTCAGAACCAGACCGCTCCGTTTAGAGAGGTCCAGAGCGCCACGCTTCAGGCGGTTCAGCAGACGGcc > 2:670645/2‑93 (MQ=255)
aTGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGccc > 2:1681682/1‑93 (MQ=255)
aTGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGccc > 1:1783852/1‑93 (MQ=255)
tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg > 1:3962711/1‑93 (MQ=255)
tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCAACGTTTCAGGTGGTTCAGCAGACGGCCCg > 1:963957/1‑93 (MQ=255)
tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGGCCAGAGTGCCACGGTTCAGGTGGTTCAGCAGACGGCCCg > 2:204861/1‑93 (MQ=255)
gcagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAg < 1:141640/93‑1 (MQ=255)
cagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGt > 2:1106040/1‑93 (MQ=255)
cagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGt < 2:3526228/93‑1 (MQ=255)
agcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTa > 2:378268/1‑93 (MQ=255)
gcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAc > 2:193645/1‑93 (MQ=255)
gcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAc > 1:3266087/1‑93 (MQ=255)
gcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGAAc > 2:3808461/1‑93 (MQ=255)
caTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAcc < 2:3554175/93‑1 (MQ=255)
aTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCg > 1:1022157/1‑93 (MQ=255)
aTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCg < 2:2954520/93‑1 (MQ=255)
gTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAAc < 2:2490845/93‑1 (MQ=255)
tCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACg > 1:3761411/1‑93 (MQ=255)
tCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACg > 2:3711851/1‑93 (MQ=255)
aGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGAt > 2:2116474/1‑93 (MQ=255)
aGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAACGACAACGAt < 2:2869048/93‑1 (MQ=255)
gCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATc > 2:1792694/1‑93 (MQ=255)
gCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATc < 1:299322/93‑1 (MQ=255)
gCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATc < 1:3674079/93‑1 (MQ=255)
gCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATc > 1:494543/1‑93 (MQ=255)
cTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCt < 2:1713497/93‑1 (MQ=255)
cTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCt > 1:2569489/1‑93 (MQ=255)
cTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCt < 1:2077264/93‑1 (MQ=255)
cTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCt < 1:4675673/93‑1 (MQ=255)
aTCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCgg < 1:1189068/93‑1 (MQ=255)
tCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGc > 1:3829104/1‑93 (MQ=255)
cAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGccc < 2:1031479/93‑1 (MQ=255)
aGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGcccc < 1:458921/93‑1 (MQ=255)
aGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGcccc > 1:2659219/1‑93 (MQ=255)
gAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCt < 1:3174236/93‑1 (MQ=255)
aaCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTg > 2:4077877/1‑93 (MQ=255)
aCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGa > 1:2428698/1‑93 (MQ=255)
cAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACg > 2:2587695/1‑93 (MQ=255)
gACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCa > 1:4555409/1‑93 (MQ=255)
gACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGGGGTTCAGCAGACGGCCCGGAGTACTGACAACGATCTGCGGCCGCTGTCgtg > 1:4140138/1‑91 (MQ=255)
aCCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAg < 1:2349401/93‑1 (MQ=255)
ccGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAgg < 2:495965/93‑1 (MQ=255)
ccGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAgg < 2:2614383/93‑1 (MQ=255)
cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg > 1:1740450/1‑93 (MQ=255)
cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg < 2:2385598/93‑1 (MQ=255)
cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg < 1:479386/93‑1 (MQ=255)
cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg < 2:752535/93‑1 (MQ=255)
cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg < 2:1822253/93‑1 (MQ=255)
gCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGgc > 1:2503003/1‑93 (MQ=255)
cTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGCCAACGATCTGCGGCCCCTGACGCAGGgcg > 1:1377367/1‑93 (MQ=255)
tCAGTTTAGAGAGGTCCAGAGTCCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGgcgc < 1:3479826/93‑1 (MQ=255)
aGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGt < 1:4472760/93‑1 (MQ=255)
gTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTa > 1:2206198/1‑93 (MQ=255)
tttAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTaa > 1:2801599/1‑93 (MQ=255)
tAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAAtt < 2:3263177/93‑1 (MQ=255)
tAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAAtt < 2:1384512/93‑1 (MQ=255)
gagagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGc > 1:3776999/1‑93 (MQ=255)
agagGTCCAGAGTGCCACGTTTCATGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCa < 2:3459923/93‑1 (MQ=255)
gTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTc < 2:2203458/93‑1 (MQ=255)
ccAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCAt < 1:3336/93‑1 (MQ=255)
cAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATa > 2:4540563/1‑93 (MQ=255)
agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa > 2:2281271/1‑93 (MQ=255)
agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa < 1:2618900/93‑1 (MQ=255)
gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc > 1:201820/1‑93 (MQ=255)
gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc > 2:3117376/1‑93 (MQ=255)
gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc < 2:2527418/93‑1 (MQ=255)
gTGCCACGTTTCAGGTGGTTCAGCAGACGGCCTGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc < 2:2726029/93‑1 (MQ=255)
gTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc > 2:4678445/1‑93 (MQ=255)
gCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAAGGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTg > 2:2128097/1‑93 (MQ=255)
ccACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTgg < 2:1996819/93‑1 (MQ=255)
cACTTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgc < 1:3529128/93‑1 (MQ=255)
cACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgc > 1:1917626/1‑93 (MQ=255)
cACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgc < 1:1621345/93‑1 (MQ=255)
cACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgc > 2:4148094/1‑93 (MQ=255)
gTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccgc < 2:3950747/93‑1 (MQ=255)
ttCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGccgccg > 1:574896/1‑93 (MQ=255)
aGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTAc < 2:1260619/93‑1 (MQ=255)
ggtggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACa < 1:4460528/93‑1 (MQ=255)
ggtggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACa > 2:4528062/1‑93 (MQ=255)
ggtggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACa > 2:1458137/1‑93 (MQ=255)
tggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACaga < 1:798611/93‑1 (MQ=255)
tggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACaga < 1:1589810/93‑1 (MQ=255)
tggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACaga < 2:3489178/93‑1 (MQ=255)
|
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGA > NC_000913/3305001‑3305178
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAAC > NC_000913/3304997‑3305183
|
CTTCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTT > SRR4302535.2607617/1‑94 (MQ=60)
TCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCA < SRR4302535.4198172/94‑1 (MQ=60)
TCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCA < SRR4302535.2208333/94‑1 (MQ=60)
CGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAG > SRR4302535.3030160/1‑94 (MQ=60)
CGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAG > SRR4302535.2853678/1‑94 (MQ=60)
CGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAG > SRR4302535.2609052/1‑94 (MQ=60)
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGC > SRR4302535.1773852/1‑94 (MQ=60)
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGC > SRR4302535.1369826/1‑94 (MQ=60)
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGC > SRR4302535.3659308/1‑94 (MQ=60)
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGC > SRR4302535.3659307/1‑94 (MQ=60)
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGC > SRR4302535.150729/1‑94 (MQ=60)
CTGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCA < SRR4302535.4533841/94‑1 (MQ=60)
ATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCGGGTGGTTCAGCA < SRR4302535.3130615/94‑1 (MQ=60)
TGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAG < SRR4302535.2901718/94‑1 (MQ=60)
AAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGAC > SRR4302535.761014/1‑94 (MQ=60)
AGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCCGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACG < SRR4302535.3062171/94‑1 (MQ=60)
AGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACG < SRR4302535.3599297/94‑1 (MQ=60)
AGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACG > SRR4302535.813570/1‑94 (MQ=60)
GCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGG < SRR4302535.1037678/94‑1 (MQ=60)
GCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGG > SRR4302535.232121/1‑94 (MQ=60)
CCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGC > SRR4302535.222936/1‑94 (MQ=60)
CCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCC > SRR4302535.3139146/1‑94 (MQ=60)
CCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCC > SRR4302535.2305172/1‑94 (MQ=60)
CCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCC > SRR4302535.844489/1‑94 (MQ=60)
CATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCC > SRR4302535.1796761/1‑94 (MQ=60)
CATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCC < SRR4302535.2205031/94‑1 (MQ=60)
ATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCG < SRR4302535.3615084/94‑1 (MQ=60)
ATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCG > SRR4302535.3989778/1‑94 (MQ=60)
ATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCAACGTTTCAGGTGGTTCAGCAGACGGCCCG > SRR4302535.970807/1‑94 (MQ=60)
CGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAG > SRR4302535.2647321/1‑94 (MQ=60)
GCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGT > SRR4302535.2605877/1‑94 (MQ=60)
GCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGT < SRR4302535.142632/94‑1 (MQ=60)
GCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGA > SRR4302535.4193140/1‑94 (MQ=60)
CAGCATTTCGTCAGCTTCATCCAGAGCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCTCGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTA < SRR4302535.2701858/94‑1 (MQ=60)
AGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAC > SRR4302535.4529802/1‑94 (MQ=60)
AGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAC > SRR4302535.3288777/1‑94 (MQ=60)
CATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGATTTGTCCAGAGTGCCTCGTTTCAGGTGTTTCAGCAGACGGCTCGGAGTACCG > SRR4302535.4714957/1‑94 (MQ=60)
CATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCG > SRR4302535.4592319/1‑94 (MQ=60)
CATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCG > SRR4302535.1029419/1‑94 (MQ=60)
CATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGCGGTTCAGCAGACGGCCCGGAGTACCG > SRR4302535.2838771/1‑94 (MQ=60)
CATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGCATCAGGTGGTTCAGCAGACGGCCCGGAGTACCG > SRR4302535.195709/1‑94 (MQ=60)
ATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGA > SRR4302535.1902046/1‑94 (MQ=60)
ATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGA > SRR4302535.565942/1‑94 (MQ=60)
TTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGAC < SRR4302535.2080796/94‑1 (MQ=60)
CGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAAC > SRR4302535.332065/1‑94 (MQ=60)
GTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACG > SRR4302535.3787405/1‑94 (MQ=60)
TCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGA > SRR4302535.467216/1‑94 (MQ=60)
CAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGAT > SRR4302535.2325082/1‑94 (MQ=60)
AGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCATAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGCACCGACAACGATC > SRR4302535.3759158/1‑94 (MQ=60)
AGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATC > SRR4302535.165232/1‑94 (MQ=60)
AGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATC > SRR4302535.498011/1‑94 (MQ=60)
GCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCT > SRR4302535.2587968/1‑94 (MQ=60)
GCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCT < SRR4302535.3699519/94‑1 (MQ=60)
GCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCT < SRR4302535.301407/94‑1 (MQ=60)
CTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTG < SRR4302535.4707235/94‑1 (MQ=60)
CTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTG < SRR4302535.2092228/94‑1 (MQ=60)
CTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTG > SRR4302535.643581/1‑94 (MQ=60)
ATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGC < SRR4302535.1197585/94‑1 (MQ=60)
ATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGC > SRR4302535.3855514/1‑94 (MQ=60)
CCAGAACCAGAGCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCC < SRR4302535.1601825/94‑1 (MQ=60)
CAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCC > SRR4302535.1442909/1‑94 (MQ=60)
CAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCC > SRR4302535.2678270/1‑94 (MQ=60)
AGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCT < SRR4302535.462131/94‑1 (MQ=60)
GAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTG < SRR4302535.2455556/94‑1 (MQ=60)
GAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTG < SRR4302535.3196204/94‑1 (MQ=60)
AACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGA > SRR4302535.2446198/1‑94 (MQ=60)
ACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGAC > SRR4302535.1556823/1‑94 (MQ=60)
CCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACG < SRR4302535.483926/94‑1 (MQ=60)
AGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCA > SRR4302535.4586523/1‑94 (MQ=60)
AGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGACCCTGACGCA > SRR4302535.4080101/1‑94 (MQ=60)
AGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGGGGTTCAGCAGACGGCCCGGAGTACTGACAACGATCTGCGGCCgctgtcgtg > SRR4302535.4168486/1‑85 (MQ=60)
GACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAG < SRR4302535.1672649/94‑1 (MQ=60)
GACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAG > SRR4302535.3569001/1‑94 (MQ=60)
ACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGG > SRR4302535.3724195/1‑94 (MQ=60)
ACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGG < SRR4302535.3544174/94‑1 (MQ=60)
ACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGG < SRR4302535.1319595/94‑1 (MQ=60)
ACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGG < SRR4302535.2366247/94‑1 (MQ=60)
CCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGG > SRR4302535.1753028/1‑94 (MQ=60)
CGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGC < SRR4302535.482750/94‑1 (MQ=60)
CGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGC < SRR4302535.2570988/94‑1 (MQ=60)
CGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGC > SRR4302535.2521051/1‑94 (MQ=60)
GCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGCCAACGATCTGCGGCCCCTGACGCAGGGCG > SRR4302535.1387196/1‑94 (MQ=60)
GCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCG < SRR4302535.3867140/94‑1 (MQ=60)
CTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGC > SRR4302535.3213338/1‑94 (MQ=60)
CTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGC > SRR4302535.3234541/1‑94 (MQ=60)
CTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGC > SRR4302535.231391/1‑94 (MQ=60)
CTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGC > SRR4302535.604217/1‑94 (MQ=60)
TCAGTTTAGAGAGGTCCAGAGTCCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCG < SRR4302535.3504000/94‑1 (MQ=60)
AGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTA > SRR4302535.953863/1‑94 (MQ=60)
AGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTA < SRR4302535.4503455/94‑1 (MQ=60)
AGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTA > SRR4302535.2221912/1‑94 (MQ=60)
GTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAA > SRR4302535.2821527/1‑94 (MQ=60)
AGGGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGTCCCCTGACGCAGGGCGCGTAATTGC > SRR4302535.4561614/1‑94 (MQ=60)
AGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGC > SRR4302535.4498773/1‑94 (MQ=60)
AGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGC > SRR4302535.3803038/1‑94 (MQ=60)
GGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTC < SRR4302535.3368957/94‑1 (MQ=60)
GTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCA < SRR4302535.2405805/94‑1 (MQ=60)
CCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATA < SRR4302535.3366/94‑1 (MQ=60)
AGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAC > SRR4302535.203201/1‑94 (MQ=60)
AGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAC < SRR4302535.2637677/94‑1 (MQ=60)
AGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGC > SRR4302535.3190849/1‑94 (MQ=60)
AGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGC > SRR4302535.2632198/1‑94 (MQ=60)
TGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTG < SRR4302535.766375/94‑1 (MQ=60)
TGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTG < SRR4302535.3796126/94‑1 (MQ=60)
TGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTG < SRR4302535.1403487/94‑1 (MQ=60)
CCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGC > SRR4302535.1931444/1‑94 (MQ=60)
CACTTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCC < SRR4302535.3553635/94‑1 (MQ=60)
CACGTTTCAGTTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCC < SRR4302535.231187/94‑1 (MQ=60)
CACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCC < SRR4302535.1633044/94‑1 (MQ=60)
GTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCC > SRR4302535.2645328/1‑94 (MQ=60)
TTTCAGGTGGTTCAGCAGACGGTCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCG > SRR4302535.3834924/1‑94 (MQ=60)
TTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCG > SRR4302535.578931/1‑94 (MQ=60)
TTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGT > SRR4302535.1373146/1‑94 (MQ=60)
AGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACA < SRR4302535.4515332/94‑1 (MQ=60)
AGGGGGTTCAGTAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCGGGACA > SRR4302535.2850811/1‑94 (MQ=60)
GGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAG < SRR4302535.4491121/94‑1 (MQ=60)
TGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAG < SRR4302535.1601285/94‑1 (MQ=60)
TGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAG < SRR4302535.804218/94‑1 (MQ=60)
GTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCA < SRR4302535.580386/94‑1 (MQ=60)
TCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAAC > SRR4302535.1153049/1‑94 (MQ=60)
TCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAAC < SRR4302535.810405/94‑1 (MQ=60)
|
CTTCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAAC > NC_000913/3304997‑3305183
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
