Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,308,411 |
A→G |
G133G (GGT→GGC) |
b3164 ← |
polynucleotide phosphorylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,308,411 | 0 | A | G | 96.3%
| 628.3
/ 8.2
| 215 | G133G (GGT→GGC) | b3164 | polynucleotide phosphorylase |
| Reads supporting (aligned to +/- strand): ref base A (1/7); new base G (90/117); total (91/124) |
| Fisher's exact test for biased strand distribution p-value = 1.42e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 |
Only 100 of 221 total aligned reads displayed.
CAGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCACCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCGG > NC_000913/3308321‑3308500
|
cAGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGcc < 1:583984/93‑1 (MQ=255)
aGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCa > 1:2279933/1‑93 (MQ=255)
aGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCa > 2:3428212/1‑93 (MQ=255)
gtacgtacTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCaa < 2:1498476/93‑1 (MQ=255)
gtacgtacTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCaa < 2:4348602/93‑1 (MQ=255)
gtacgtacTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCaa < 2:2921239/93‑1 (MQ=255)
tacgtacTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAat < 1:35387/93‑1 (MQ=255)
tacgtacTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAat > 1:4549031/1‑93 (MQ=255)
acgtacTGATCATTGATGTAACCTACGCGTGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAatc < 2:2433426/93‑1 (MQ=255)
gtacTGGTCATTGATGTAACCTACGCGGGCAGTACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAatcat < 1:4430701/93‑1 (MQ=255)
gtacTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAatcat > 2:300298/1‑93 (MQ=255)
cTGGTCATTGATGTAACCTACGCGGTCAGCACCAATCGGACCATTGAACGGAATCCCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATcgc < 2:943356/93‑1 (MQ=255)
cTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATcgc > 2:2021663/1‑93 (MQ=255)
tCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGcgacg > 1:1339200/1‑93 (MQ=255)
cATTTATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGcgacga < 2:1911296/93‑1 (MQ=255)
cATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGACGCGCCAATCATCGcgacga < 2:4558215/93‑1 (MQ=255)
cATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGcgacga > 2:4006772/1‑93 (MQ=255)
ttGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGata > 2:4114183/1‑93 (MQ=255)
ttGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGata > 2:859783/1‑93 (MQ=255)
ttGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGata > 1:1178076/1‑93 (MQ=255)
gATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATc < 1:3190355/93‑1 (MQ=255)
gATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATc < 1:163025/93‑1 (MQ=255)
gATGGAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATc < 2:3735789/93‑1 (MQ=255)
aTGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATcc < 1:3317515/93‑1 (MQ=255)
aTGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATcc < 1:3841110/93‑1 (MQ=255)
tGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCg < 2:2671777/93‑1 (MQ=255)
tGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCg > 2:4132074/1‑93 (MQ=255)
tGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCg < 2:3542055/93‑1 (MQ=255)
gTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCgg < 1:3289138/93‑1 (MQ=255)
tAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCggg < 1:2784744/93‑1 (MQ=255)
aCCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGtt > 1:3089629/1‑93 (MQ=255)
aCCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGtt > 2:1863598/1‑93 (MQ=255)
aCCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGtt < 1:2033552/93‑1 (MQ=255)
ccTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTa > 2:4358295/1‑93 (MQ=255)
cTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTaa > 1:1514110/1‑93 (MQ=255)
cTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTaa > 1:2164676/1‑93 (MQ=255)
cTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTaa > 2:4632864/1‑93 (MQ=255)
tACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAAc < 2:3903653/93‑1 (MQ=255)
tACGCGGCCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAAc < 2:3956254/93‑1 (MQ=255)
cgcgGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACtt < 1:3330069/93‑1 (MQ=255)
cgGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGc < 1:2703788/93‑1 (MQ=255)
cgGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGc < 1:1016533/93‑1 (MQ=255)
gcagcaCCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCggg < 1:2395771/93‑1 (MQ=255)
gcagcaCCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCACCAATCATCGCGACGATATCCGGGTTAACTTGCggg < 2:1593097/93‑1 (MQ=255)
cagcaCCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGt < 2:1770049/93‑1 (MQ=255)
gcaCCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTa > 1:2999042/1‑93 (MQ=255)
gcaCCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTa > 2:3203299/1‑93 (MQ=255)
gcaCCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTa > 2:546259/1‑93 (MQ=255)
gcaCCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTACGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTa > 1:3440955/1‑93 (MQ=255)
caCCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTaa < 1:1756105/93‑1 (MQ=255)
aCCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAAc < 2:1262096/93‑1 (MQ=255)
ccAAGCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACa < 2:1090196/93‑1 (MQ=255)
aaTCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGa < 1:398318/93‑1 (MQ=255)
aaTCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGa < 1:3596616/93‑1 (MQ=255)
aaTCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGa < 2:1202195/93‑1 (MQ=255)
aaTCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGa < 1:4575171/93‑1 (MQ=255)
aTCGCGCGATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGaa < 2:2801225/93‑1 (MQ=255)
tCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGaaa < 1:4094620/93‑1 (MQ=255)
tCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGaaa < 2:2301868/93‑1 (MQ=255)
ggCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCa < 1:4260160/93‑1 (MQ=255)
ggCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCa < 1:3687503/93‑1 (MQ=255)
gCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCAc < 1:3251329/93‑1 (MQ=255)
ccATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACg > 1:89960/1‑93 (MQ=255)
cATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACgg > 2:1315069/1‑93 (MQ=255)
aTTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGt < 2:262564/93‑1 (MQ=255)
ttGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAACCCACGGTg < 2:3632261/93‑1 (MQ=255)
ttGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTg < 2:2716313/93‑1 (MQ=255)
gAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATaa < 1:1955112/93‑1 (MQ=255)
gAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATaa > 2:3181576/1‑93 (MQ=255)
tACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCt > 2:2643777/1‑93 (MQ=255)
aCCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTg < 1:287793/93‑1 (MQ=255)
ccAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGa < 2:580722/93‑1 (MQ=255)
agacagagacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAAc < 2:2063727/93‑1 (MQ=255)
gacagagacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACt < 2:142833/93‑1 (MQ=255)
acagagacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACtt < 1:1966546/93‑1 (MQ=255)
acagagacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACtt < 1:260422/93‑1 (MQ=255)
acagagacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACtt < 2:4063268/93‑1 (MQ=255)
cagagacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTc < 1:2897360/93‑1 (MQ=255)
gagacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGt < 2:2875993/93‑1 (MQ=255)
gagacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGt < 1:2745943/93‑1 (MQ=255)
gagacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGt > 1:717445/1‑93 (MQ=255)
agacagCGCTGCGGAAGCACCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGtt < 2:484641/93‑1 (MQ=255)
gacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTg < 2:3426022/93‑1 (MQ=255)
gacagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTg < 2:1058610/93‑1 (MQ=255)
acagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGa > 1:617157/1‑93 (MQ=255)
cagCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGAc < 1:830732/93‑1 (MQ=255)
gcgcTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGa < 2:913373/93‑1 (MQ=255)
gcTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAg < 1:3920982/93‑1 (MQ=255)
cTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGc > 2:4261640/1‑93 (MQ=255)
cTGCGGAAGCACCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGc > 2:237285/1‑93 (MQ=255)
tGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGcc > 2:180794/1‑93 (MQ=255)
tGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGcc > 2:716703/1‑93 (MQ=255)
tGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGcc > 1:3901240/1‑93 (MQ=255)
cGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCtt > 2:1629833/1‑93 (MQ=255)
ggAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTc < 1:2805826/93‑1 (MQ=255)
gAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATCAACTGAACTTCGTTGACGAAGCCTTcc > 1:3766433/1‑93 (MQ=255)
gAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTcc > 1:1567395/1‑93 (MQ=255)
gAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTcc < 1:4313168/93‑1 (MQ=255)
gAAGCCCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTcc < 2:1679485/93‑1 (MQ=255)
aaGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCg > 1:237732/1‑93 (MQ=255)
|
CAGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCACCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCGG > NC_000913/3308321‑3308500
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCAGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCACCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCGGGAAC > NC_000913/3308319‑3308504
|
TTCAGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGC > SRR4302535.1568371/1‑94 (MQ=60)
CAGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCA < SRR4302535.588079/94‑1 (MQ=60)
CAGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCA > SRR4302535.2296217/1‑94 (MQ=60)
AGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCAGAAGCGCCAA < SRR4302535.2900019/94‑1 (MQ=60)
GTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAAT < SRR4302535.2713233/94‑1 (MQ=60)
GTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAAT > SRR4302535.4580131/1‑94 (MQ=60)
TACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATC < SRR4302535.35660/94‑1 (MQ=60)
GTACTGGTCATTGATGTAACCTACGCGGGCAGTACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATC < SRR4302535.4461059/94‑1 (MQ=60)
GTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATC > SRR4302535.983083/1‑94 (MQ=60)
CTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAACGCTGCGGAAGCGCCAATCATCGCG > SRR4302535.3528758/1‑94 (MQ=60)
TGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGA > SRR4302535.1976767/1‑94 (MQ=60)
GGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGAC < SRR4302535.21632/94‑1 (MQ=60)
GGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGAC < SRR4302535.2401971/94‑1 (MQ=60)
GTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACG > SRR4302535.4306654/1‑94 (MQ=60)
GTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACG > SRR4302535.1348755/1‑94 (MQ=60)
GTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACG > SRR4302535.3557634/1‑94 (MQ=60)
ATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATA > SRR4302535.1186479/1‑94 (MQ=60)
TTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATAT < SRR4302535.2755740/94‑1 (MQ=60)
TTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATAT > SRR4302535.1957987/1‑94 (MQ=60)
TTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATAT < SRR4302535.660687/94‑1 (MQ=60)
TGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATC > SRR4302535.2901811/1‑94 (MQ=60)
GATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCC < SRR4302535.164163/94‑1 (MQ=60)
GATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCC < SRR4302535.3212418/94‑1 (MQ=60)
GATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCC < SRR4302535.2367267/94‑1 (MQ=60)
ATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCG < SRR4302535.3867577/94‑1 (MQ=60)
ATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCG > SRR4302535.2811033/1‑94 (MQ=60)
ATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCG < SRR4302535.3340598/94‑1 (MQ=60)
TGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCACTAATCGCGACGATATCCGG > SRR4302535.901260/1‑94 (MQ=60)
TGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGG < SRR4302535.3981310/94‑1 (MQ=60)
TGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGG < SRR4302535.1697264/94‑1 (MQ=60)
GTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGG < SRR4302535.3312007/94‑1 (MQ=60)
TAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGT < SRR4302535.2804559/94‑1 (MQ=60)
TAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGT < SRR4302535.4662850/94‑1 (MQ=60)
AACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTT > SRR4302535.4596163/1‑94 (MQ=60)
AACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTT < SRR4302535.2473651/94‑1 (MQ=60)
AACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTT > SRR4302535.3111147/1‑94 (MQ=60)
ACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTA < SRR4302535.2048205/94‑1 (MQ=60)
CCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAA > SRR4302535.2180200/1‑94 (MQ=60)
CCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAA > SRR4302535.1525015/1‑94 (MQ=60)
CTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAAC > SRR4302535.430710/1‑94 (MQ=60)
TACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACT > SRR4302535.2012694/1‑94 (MQ=60)
ACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCACCAATCATCGCGACGATATCCGGGTTAACTT < SRR4302535.3437175/94‑1 (MQ=60)
CGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTG < SRR4302535.3353239/94‑1 (MQ=60)
CGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCG < SRR4302535.2723104/94‑1 (MQ=60)
CGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCG < SRR4302535.1023758/94‑1 (MQ=60)
GGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGG < SRR4302535.3238112/94‑1 (MQ=60)
GGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGG < SRR4302535.2769756/94‑1 (MQ=60)
GGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGG < SRR4302535.788365/94‑1 (MQ=60)
GCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGT < SRR4302535.2412990/94‑1 (MQ=60)
CAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTT > SRR4302535.3565898/1‑94 (MQ=60)
AGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTA > SRR4302535.3020068/1‑94 (MQ=60)
AGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTACGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTA > SRR4302535.3464883/1‑94 (MQ=60)
CACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAAC < SRR4302535.1768799/94‑1 (MQ=60)
CCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAG < SRR4302535.4135499/94‑1 (MQ=60)
CCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAG > SRR4302535.4424137/1‑94 (MQ=60)
CAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGA < SRR4302535.1635941/94‑1 (MQ=60)
AATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAA < SRR4302535.4606351/94‑1 (MQ=60)
AATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAA > SRR4302535.365044/1‑94 (MQ=60)
AATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAA < SRR4302535.3621575/94‑1 (MQ=60)
AATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAA < SRR4302535.401109/94‑1 (MQ=60)
TCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAAC < SRR4302535.2848518/94‑1 (MQ=60)
TCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAAC < SRR4302535.4122640/94‑1 (MQ=60)
TCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAAC < SRR4302535.2660315/94‑1 (MQ=60)
CGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACC < SRR4302535.2160114/94‑1 (MQ=60)
GGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCA > SRR4302535.1148165/1‑94 (MQ=60)
GGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCAC < SRR4302535.4289338/94‑1 (MQ=60)
GGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCAC < SRR4302535.3713016/94‑1 (MQ=60)
GCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACG < SRR4302535.3273921/94‑1 (MQ=60)
GCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACG > SRR4302535.90594/1‑94 (MQ=60)
GCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACG < SRR4302535.1555745/94‑1 (MQ=60)
ATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTG > SRR4302535.1614097/1‑94 (MQ=60)
TTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGG > SRR4302535.3306819/1‑94 (MQ=60)
GAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCG > SRR4302535.323473/1‑94 (MQ=60)
AACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGA < SRR4302535.3916400/94‑1 (MQ=60)
AACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGA > SRR4302535.3768873/1‑94 (MQ=60)
AACGGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGA > SRR4302535.3322614/1‑94 (MQ=60)
GGAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAA > SRR4302535.3936404/1‑94 (MQ=60)
GAATACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAAC < SRR4302535.1969185/94‑1 (MQ=60)
ACCAGACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGA < SRR4302535.289809/94‑1 (MQ=60)
GACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTT > SRR4302535.1213908/1‑94 (MQ=60)
ACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTC < SRR4302535.1980721/94‑1 (MQ=60)
ACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTC < SRR4302535.262229/94‑1 (MQ=60)
ACAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTC > SRR4302535.3342230/1‑94 (MQ=60)
CAGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCG < SRR4302535.2917848/94‑1 (MQ=60)
AGAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGT > SRR4302535.722485/1‑94 (MQ=60)
GAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTT < SRR4302535.1428919/94‑1 (MQ=60)
GAGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTT < SRR4302535.2765515/94‑1 (MQ=60)
AGACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTG < SRR4302535.2191436/94‑1 (MQ=60)
GACAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGA > SRR4302535.621450/1‑94 (MQ=60)
CAGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACG < SRR4302535.836554/94‑1 (MQ=60)
AGCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGA > SRR4302535.3189045/1‑94 (MQ=60)
GCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTTACGAA > SRR4302535.2994052/1‑94 (MQ=60)
GCGCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAA > SRR4302535.603246/1‑94 (MQ=60)
GCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGC < SRR4302535.3947790/94‑1 (MQ=60)
GCTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGC < SRR4302535.3813484/94‑1 (MQ=60)
CTGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCC > SRR4302535.3927963/1‑94 (MQ=60)
TGCGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCT > SRR4302535.4084859/1‑94 (MQ=60)
CGGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTC > SRR4302535.3888584/1‑94 (MQ=60)
GGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATCAACTGAACTTCGTTGACGAAGCCTTCC > SRR4302535.3792445/1‑94 (MQ=60)
GGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCC < SRR4302535.4693929/94‑1 (MQ=60)
GGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCC > SRR4302535.1578704/1‑94 (MQ=60)
GGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCC < SRR4302535.2825774/94‑1 (MQ=60)
GGAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCC < SRR4302535.3106718/94‑1 (MQ=60)
GAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCG < SRR4302535.4342672/94‑1 (MQ=60)
GAAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCG > SRR4302535.239367/1‑94 (MQ=60)
AAGCGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCGG > SRR4302535.4527267/1‑94 (MQ=60)
CGCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCGGGAA > SRR4302535.1079070/1‑94 (MQ=60)
GCCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCGGGAAC > SRR4302535.703674/1‑94 (MQ=60)
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TTCAGTACGTACTGGTCATTGATGTAACCTACGCGGGCAGCACCAATCGGGCCATTGAACGGAATACCAGACAGAGACAGCGCTGCGGAAGCACCAATCATCGCGACGATATCCGGGTTAACTTGCGGGTTAACAGAAACCACGGTGGCGATAACCTGAACTTCGTTGACGAAGCCTTCCGGGAAC > NC_000913/3308319‑3308504
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
