Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,316,615 |
T→C |
M113T (ATG→ACG) |
argG → |
argininosuccinate synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,316,615 | 0 | T | C | 100.0%
| 710.2
/ NA
| 223 | M113T (ATG→ACG) | argG | argininosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (94/129); total (94/129) |
Only 100 of 229 total aligned reads displayed.
CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTT > NC_000913/3316525‑3316704
|
cGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCt < 1:3015094/93‑1 (MQ=255)
gCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTg > 1:345503/1‑93 (MQ=255)
ccTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTg < 1:4024602/92‑1 (MQ=255)
tATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGt > 2:3417794/1‑93 (MQ=255)
tATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGt > 2:1538648/1‑93 (MQ=255)
tATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGt < 1:1830867/93‑1 (MQ=255)
aGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgctg < 2:2589634/93‑1 (MQ=255)
aGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgctg > 1:2221325/1‑93 (MQ=255)
gtgtGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgctgc > 1:1880091/1‑93 (MQ=255)
tgtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCg > 2:2677019/1‑93 (MQ=255)
tgtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCg > 2:3896512/1‑93 (MQ=255)
gtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGa < 2:3151536/93‑1 (MQ=255)
gtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGa < 1:924914/93‑1 (MQ=255)
tgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt < 2:1207249/93‑1 (MQ=255)
tgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt < 1:311737/93‑1 (MQ=255)
cgcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaa < 1:4330213/93‑1 (MQ=255)
gcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaaa > 2:3580604/1‑93 (MQ=255)
gcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaaa > 1:461910/1‑93 (MQ=255)
gcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaaa > 1:4531852/1‑93 (MQ=255)
cATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaag > 2:949239/1‑93 (MQ=255)
cATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaag < 1:730774/93‑1 (MQ=255)
cATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaag > 2:4224334/1‑93 (MQ=255)
aTTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaaga > 1:1461219/1‑93 (MQ=255)
aTTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaaga < 1:2392423/93‑1 (MQ=255)
aTTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaaga < 1:4312107/93‑1 (MQ=255)
tttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaagaa < 1:1608741/93‑1 (MQ=255)
tttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaagaa < 2:3670458/93‑1 (MQ=255)
tttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaagaa > 1:516211/1‑93 (MQ=255)
tttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaagaa < 2:828407/93‑1 (MQ=255)
tCATAACACCACCGGCGGCCTGTCCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga < 1:2725262/93‑1 (MQ=255)
tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga < 2:2161972/93‑1 (MQ=255)
tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga < 2:4643422/93‑1 (MQ=255)
cATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTCCCACGCTGGTTGCTGCGATGAAAGAAGAt < 2:2208233/93‑1 (MQ=255)
aTAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg > 1:1408808/1‑93 (MQ=255)
aTAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg < 2:1331348/93‑1 (MQ=255)
aTAACACCACCGGCGGCCTACACTATTTCAACGCGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg < 1:1328577/93‑1 (MQ=255)
aaCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGc > 1:3734081/1‑93 (MQ=255)
aaCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGc < 2:561647/93‑1 (MQ=255)
caccacCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGt < 2:1409713/93‑1 (MQ=255)
accaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTg > 1:1927386/1‑93 (MQ=255)
accaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTg > 1:2335075/1‑93 (MQ=255)
ccaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGa > 2:2123284/1‑93 (MQ=255)
ccaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGa > 2:1444657/1‑93 (MQ=255)
cccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat < 1:1030720/92‑1 (MQ=255)
cccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat < 1:876802/92‑1 (MQ=255)
accGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat > 1:3778285/1‑93 (MQ=255)
ccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAata < 2:4569088/93‑1 (MQ=255)
ggcggcCTGACGTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATc < 2:4439049/93‑1 (MQ=255)
ggcggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATc < 1:801476/93‑1 (MQ=255)
ggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTgg > 2:1267572/1‑93 (MQ=255)
gcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTggg < 2:2322324/93‑1 (MQ=255)
tGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTg > 2:1466030/1‑93 (MQ=255)
cTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACgg > 2:2976199/1‑93 (MQ=255)
cTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACgg > 2:1585129/1‑93 (MQ=255)
cTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACgg < 2:1716873/93‑1 (MQ=255)
tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt > 2:507333/1‑93 (MQ=255)
tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt < 2:1797998/93‑1 (MQ=255)
aTTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTa < 2:1073220/93‑1 (MQ=255)
aTTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTa < 1:2955287/93‑1 (MQ=255)
tttCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAg < 2:3249979/93‑1 (MQ=255)
tttCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAg < 2:528380/93‑1 (MQ=255)
ttCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGc > 1:4480261/1‑93 (MQ=255)
tCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCa > 2:3363246/1‑93 (MQ=255)
cAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCAc < 1:3404431/93‑1 (MQ=255)
aaCACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCAcc < 2:1846477/93‑1 (MQ=255)
aaCACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCAcc > 2:762695/1‑93 (MQ=255)
cccgacgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTa < 1:1257852/91‑1 (MQ=255)
acgacgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAc > 1:1224644/1‑93 (MQ=255)
acgacgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAc < 2:4371954/93‑1 (MQ=255)
acgacgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAc < 1:198477/93‑1 (MQ=255)
cgacgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACa > 2:4297755/1‑93 (MQ=255)
acgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACaaa < 2:3933963/93‑1 (MQ=255)
cgccgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAg < 1:2768903/93‑1 (MQ=255)
cgccgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAg < 2:3387100/93‑1 (MQ=255)
gccgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAACgg > 1:589845/1‑93 (MQ=255)
ccgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGa < 2:1600329/93‑1 (MQ=255)
gcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGaaa < 1:4093214/93‑1 (MQ=255)
ctcggCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAc < 1:3601727/90‑1 (MQ=255)
cTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAc < 1:3667336/93‑1 (MQ=255)
cTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAc > 2:2013569/1‑93 (MQ=255)
gggCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGa > 2:3604942/1‑93 (MQ=255)
ggCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGat > 1:2551473/1‑93 (MQ=255)
gCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGata < 2:1438934/93‑1 (MQ=255)
cgcgCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATc < 1:1701629/93‑1 (MQ=255)
gcgcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCg > 1:3807321/1‑93 (MQ=255)
gcCGTGACTGGTACCACGCTGGTTGCTGCGATGAGAGAAGATGGCGTGACTATATGGGGAGACGGTAGCAGCTACAAAGGAAACGATATCGaa > 1:2027177/1‑93 (MQ=255)
gcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGaa > 2:4075727/1‑93 (MQ=255)
gcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGaa > 2:2069148/1‑93 (MQ=255)
cGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACg < 1:3542139/93‑1 (MQ=255)
gcgACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGt < 1:2868906/91‑1 (MQ=255)
gTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGt > 2:3740675/1‑93 (MQ=255)
gACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGttt < 2:414461/93‑1 (MQ=255)
aCTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTc < 2:247785/93‑1 (MQ=255)
cTGGCACCACGCTGGGTGCTGCGATGAAAGGAGATGGCGTGTATATCTTGGGCGACGGCAGCACCTACAAAGGAAACGATATCGAACGTTTCt > 2:2703599/1‑93 (MQ=255)
tGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTa < 1:831236/93‑1 (MQ=255)
ggTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTAt < 2:2733411/93‑1 (MQ=255)
gTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATc < 2:1773704/93‑1 (MQ=255)
tACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATct > 2:3084883/1‑92 (MQ=255)
aCCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGt < 2:2235056/93‑1 (MQ=255)
aCCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGt < 2:2670662/93‑1 (MQ=255)
|
CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTT > NC_000913/3316525‑3316704
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATG > NC_000913/3316525‑3316707
|
CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCT < SRR4302535.41228/94‑1 (MQ=60)
CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCT < SRR4302535.224370/94‑1 (MQ=60)
CGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTG < SRR4302535.3036225/94‑1 (MQ=60)
CGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTG > SRR4302535.347882/1‑94 (MQ=60)
CCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGG < SRR4302535.4052138/94‑1 (MQ=60)
CTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGT > SRR4302535.842409/1‑94 (MQ=60)
gaggCAGTGTGGCGCATTTCATAACACCACCGGCTGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTT < SRR4302535.4369599/90‑1 (MQ=60)
TATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTT < SRR4302535.1844081/94‑1 (MQ=60)
ATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTG < SRR4302535.826473/94‑1 (MQ=60)
ATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTG < SRR4302535.198350/94‑1 (MQ=60)
CAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTG > SRR4302535.2237141/1‑94 (MQ=60)
AGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGC > SRR4302535.1409786/1‑94 (MQ=60)
AGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGC > SRR4302535.1893638/1‑94 (MQ=60)
AGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGC > SRR4302535.2917273/1‑94 (MQ=60)
GTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAT > SRR4302535.3379769/1‑94 (MQ=60)
GTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAT < SRR4302535.931462/94‑1 (MQ=60)
TGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATG < SRR4302535.313897/94‑1 (MQ=60)
GCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAA < SRR4302535.3678322/94‑1 (MQ=60)
CGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAA > SRR4302535.465136/1‑94 (MQ=60)
CGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAA > SRR4302535.4562871/1‑94 (MQ=60)
CGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAA > SRR4302535.1918551/1‑94 (MQ=60)
CGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAA < SRR4302535.4359827/94‑1 (MQ=60)
CATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGA < SRR4302535.735907/94‑1 (MQ=60)
CATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGA > SRR4302535.557709/1‑94 (MQ=60)
CATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGA > SRR4302535.1471687/1‑94 (MQ=60)
ATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAA < SRR4302535.2207858/94‑1 (MQ=60)
ATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAA < SRR4302535.3437418/94‑1 (MQ=60)
ATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAA < SRR4302535.2409621/94‑1 (MQ=60)
ATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAA < SRR4302535.4341607/94‑1 (MQ=60)
ATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAA > SRR4302535.1438144/1‑94 (MQ=60)
ATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAA > SRR4302535.519820/1‑94 (MQ=60)
TTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAG < SRR4302535.355654/94‑1 (MQ=60)
TTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAG > SRR4302535.818472/1‑94 (MQ=60)
TTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAG < SRR4302535.1620343/94‑1 (MQ=60)
TTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAG < SRR4302535.4357809/94‑1 (MQ=60)
TCATAACACCACCGGCGGCCTGTCCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGAT < SRR4302535.2744729/94‑1 (MQ=60)
TCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGAT < SRR4302535.159662/94‑1 (MQ=60)
TCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGAT < SRR4302535.3694962/94‑1 (MQ=60)
CATAACACCACCGGCGGCCTGCCCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATG < SRR4302535.899970/94‑1 (MQ=60)
CATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATG > SRR4302535.1418870/1‑94 (MQ=60)
ATAACACCACCGGCGGCCTACACTATTTCAACGCGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGG < SRR4302535.1338056/94‑1 (MQ=60)
TAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGC > SRR4302535.3759927/1‑94 (MQ=60)
TAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGC > SRR4302535.4196344/1‑94 (MQ=60)
CACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTG > SRR4302535.2351786/1‑94 (MQ=60)
CACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTG > SRR4302535.1941278/1‑94 (MQ=60)
CCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAA < SRR4302535.3931213/94‑1 (MQ=60)
CACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAAT > SRR4302535.3804327/1‑94 (MQ=60)
CCCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATA < SRR4302535.1038039/94‑1 (MQ=60)
CCCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATA < SRR4302535.883010/94‑1 (MQ=60)
CCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATAT < SRR4302535.1265456/94‑1 (MQ=60)
GGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCT < SRR4302535.3827367/94‑1 (MQ=60)
GGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCT < SRR4302535.807107/94‑1 (MQ=60)
GGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCT < SRR4302535.1048241/94‑1 (MQ=60)
CGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGG < SRR4302535.3000599/94‑1 (MQ=60)
GCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGG > SRR4302535.3069917/1‑94 (MQ=60)
TGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGA < SRR4302535.1664450/94‑1 (MQ=60)
TGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGA > SRR4302535.2583731/1‑94 (MQ=60)
TGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGA > SRR4302535.2791248/1‑94 (MQ=60)
CCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGG > SRR4302535.2765813/1‑94 (MQ=60)
ATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAG < SRR4302535.2976042/94‑1 (MQ=60)
ATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAG < SRR4302535.969803/94‑1 (MQ=60)
TTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGC > SRR4302535.4511016/1‑94 (MQ=60)
TCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCAC < SRR4302535.2283801/94‑1 (MQ=60)
CAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACC < SRR4302535.3428122/94‑1 (MQ=60)
CAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACC > SRR4302535.1322281/1‑94 (MQ=60)
CCCGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAC < SRR4302535.1266848/94‑1 (MQ=60)
CACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAC > SRR4302535.1233403/1‑94 (MQ=60)
ACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACA < SRR4302535.199840/94‑1 (MQ=60)
CGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAACGG > SRR4302535.593977/1‑94 (MQ=60)
CGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGG < SRR4302535.2788617/94‑1 (MQ=60)
CGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGG < SRR4302535.2765100/94‑1 (MQ=60)
GCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAC < SRR4302535.4121224/94‑1 (MQ=60)
GCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAC < SRR4302535.943232/94‑1 (MQ=60)
CTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACG < SRR4302535.3692732/94‑1 (MQ=60)
CTCGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACG < SRR4302535.3626721/94‑1 (MQ=60)
TGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGA > SRR4302535.4714995/1‑94 (MQ=60)
GGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGAT > SRR4302535.2569844/1‑94 (MQ=60)
GGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGAT < SRR4302535.3580592/94‑1 (MQ=60)
GGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATA < SRR4302535.4691979/94‑1 (MQ=60)
GCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATAT < SRR4302535.1767884/94‑1 (MQ=60)
GCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATAT < SRR4302535.4515328/94‑1 (MQ=60)
CGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCG > SRR4302535.3833579/1‑94 (MQ=60)
CGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCG < SRR4302535.1713927/94‑1 (MQ=60)
CGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCG < SRR4302535.4622094/94‑1 (MQ=60)
CGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCG < SRR4302535.798051/94‑1 (MQ=60)
CGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCG > SRR4302535.2400140/1‑94 (MQ=60)
CGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAGAGAAGATGGCGTGACTATATGGGGAGACGGTAGCAGCTACAAAGGAAACGATATCGAA > SRR4302535.2041785/1‑94 (MQ=60)
GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC < SRR4302535.163482/94‑1 (MQ=60)
GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC < SRR4302535.624704/94‑1 (MQ=60)
CCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACG < SRR4302535.3509649/94‑1 (MQ=60)
CCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACG < SRR4302535.1863377/94‑1 (MQ=60)
CGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGT > SRR4302535.1391239/1‑94 (MQ=60)
CGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGT < SRR4302535.3566749/94‑1 (MQ=60)
GTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTT < SRR4302535.4072966/94‑1 (MQ=60)
GCGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTT < SRR4302535.2889225/94‑1 (MQ=60)
ACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCT < SRR4302535.4448764/94‑1 (MQ=60)
ACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCT < SRR4302535.3713471/94‑1 (MQ=60)
CTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTA < SRR4302535.2012924/94‑1 (MQ=60)
TGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTAT < SRR4302535.837061/94‑1 (MQ=60)
TGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTAT < SRR4302535.379524/94‑1 (MQ=60)
TGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTAT < SRR4302535.301883/94‑1 (MQ=60)
GTACCACGGTGGTTGATGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGAACCTAAAAAGGAAACGATATCGAACGTTTTTATCG < SRR4302535.2556299/94‑1 (MQ=60)
GTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCG < SRR4302535.1984081/94‑1 (MQ=60)
CACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAT < SRR4302535.2143060/94‑1 (MQ=60)
CACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAT > SRR4302535.1462298/1‑94 (MQ=60)
CACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAT < SRR4302535.3976322/94‑1 (MQ=60)
CACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAT < SRR4302535.2518044/94‑1 (MQ=60)
ACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATG > SRR4302535.1806048/1‑94 (MQ=60)
ACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATG > SRR4302535.1686233/1‑94 (MQ=60)
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CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATG > NC_000913/3316525‑3316707
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
