Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,316,615 T→C M113T (ATG→ACG)  argG → argininosuccinate synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,316,6150TC99.4% 1070.6 / ‑3.7 341M113T (ATG→ACG) argGargininosuccinate synthetase
Reads supporting (aligned to +/- strand):  ref base T (2/0);  new base C (159/180);  total (161/180)
Fisher's exact test for biased strand distribution p-value = 2.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01

Only 100 of 353 total aligned reads displayed.

CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAT  >  NC_000913/3316525‑3316706
                                                                                          |                                                                                           
   cTATTCAGTGTGGAGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCGCCTGGGCCGCGCCGTGACTGGAACCACGCTgg                                                                                        >  2:2793768/1‑93 (MQ=255)
    tATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGt                                                                                       <  2:425832/93‑1 (MQ=255)
    tATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGt                                                                                       >  1:5212301/1‑93 (MQ=255)
    tATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGt                                                                                       >  2:7620379/1‑93 (MQ=255)
    tATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGt                                                                                       <  1:1422797/93‑1 (MQ=255)
     aTTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGtt                                                                                      <  2:1634405/93‑1 (MQ=255)
        cAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgct                                                                                   <  2:772788/93‑1 (MQ=255)
          gtgtGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgctgc                                                                                 <  1:4299978/93‑1 (MQ=255)
          gtgtGGCCCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgctgc                                                                                 <  2:2284343/93‑1 (MQ=255)
            gtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCCACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGa                                                                               >  2:5548057/1‑93 (MQ=255)
            gtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGa                                                                               >  1:1646702/1‑93 (MQ=255)
            gtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGa                                                                               <  1:3181204/93‑1 (MQ=255)
             tgGCGCATTTCATAGCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt                                                                              <  1:6570943/93‑1 (MQ=255)
             tgGCGCATTTCATAACCCCACCGGCGGCCTGACCTATTTCAACCCGACGCCGCGGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt                                                                              <  1:113124/93‑1 (MQ=255)
             tgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt                                                                              <  2:2100276/93‑1 (MQ=255)
             tgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt                                                                              <  1:3550812/93‑1 (MQ=255)
             tgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt                                                                              <  1:1186899/93‑1 (MQ=255)
              ggCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATg                                                                             <  2:4777254/93‑1 (MQ=255)
              ggCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATg                                                                             <  2:6851795/93‑1 (MQ=255)
               gcgcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGa                                                                            <  1:6712677/93‑1 (MQ=255)
                 gcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaaa                                                                          <  1:7825453/93‑1 (MQ=255)
                  cATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaag                                                                         >  2:5183793/1‑93 (MQ=255)
                    tttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTCCCCCGCTGGTTGCTGCGATGAaagaa                                                                       <  2:3661117/93‑1 (MQ=255)
                     ttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaagaag                                                                      <  1:5275320/93‑1 (MQ=255)
                      tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                     <  2:4463400/93‑1 (MQ=255)
                      tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                     <  2:886496/93‑1 (MQ=255)
                      tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                     <  2:542196/93‑1 (MQ=255)
                        aTAACACCCCCGGCGGCCTGACCTATTGCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg                                                                   <  1:1860429/93‑1 (MQ=255)
                        aTAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg                                                                   <  1:1593008/93‑1 (MQ=255)
                        aTAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg                                                                   >  1:775043/1‑93 (MQ=255)
                        aTAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg                                                                   >  1:2097078/1‑93 (MQ=255)
                         tAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATgg                                                                  <  1:4129832/93‑1 (MQ=255)
                         tAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATgg                                                                  >  2:1139179/1‑93 (MQ=255)
                          aaCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGc                                                                 <  1:6363692/93‑1 (MQ=255)
                           acacCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCCCGCTGGTTGCTGCGATGAAAGAAGATGGCg                                                                >  2:4722268/1‑93 (MQ=255)
                           acacCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCg                                                                >  2:4892911/1‑93 (MQ=255)
                             accaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTg                                                              >  1:3256294/1‑93 (MQ=255)
                             accaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTg                                                              >  2:2407829/1‑93 (MQ=255)
                               caccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGaa                                                            <  1:4250319/93‑1 (MQ=255)
                                accGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGGat                                                           >  1:7062473/1‑93 (MQ=255)
                                accGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat                                                           >  2:7112584/1‑93 (MQ=255)
                                accGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat                                                           >  2:6162849/1‑93 (MQ=255)
                                 ccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAata                                                          <  1:5844156/93‑1 (MQ=255)
                                 ccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAata                                                          <  2:7526391/93‑1 (MQ=255)
                                 ccGGCGGCCTGACATATTTCAACTCGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAata                                                          <  1:5657913/93‑1 (MQ=255)
                                  cggcggCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAatat                                                         >  1:6732186/1‑93 (MQ=255)
                                    gcggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCt                                                       <  2:6717517/93‑1 (MQ=255)
                                     cgtccTGACCTATTGCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGAGGGCGTGAATATCTg                                                      <  2:1787486/90‑1 (MQ=255)
                                      ggcCTGACCTATTTCAACGCGACGCAGCAGAACCGCGCCGTGACTGGTACCACGCTGGTTGCTGCAATGAAAGAAGATGGCGAGAATATCTgg                                                     <  2:7207625/93‑1 (MQ=255)
                                      ggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTgg                                                     >  1:2228740/1‑93 (MQ=255)
                                      ggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTgg                                                     <  1:606984/93‑1 (MQ=255)
                                       gcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTggg                                                    >  2:2624369/1‑93 (MQ=255)
                                        ccTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTgggg                                                   <  1:7267811/93‑1 (MQ=255)
                                        ccTGACCTATTGCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTgggg                                                   <  2:3863446/93‑1 (MQ=255)
                                         cTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGt                                                  <  1:6457268/93‑1 (MQ=255)
                                          tGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTg                                                 >  1:5462268/1‑93 (MQ=255)
                                          tGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTg                                                 >  1:6786075/1‑93 (MQ=255)
                                          tGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTg                                                 >  1:7931190/1‑93 (MQ=255)
                                           gACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGa                                                >  1:5038119/1‑93 (MQ=255)
                                             ccTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACg                                              >  2:1932826/1‑93 (MQ=255)
                                             ccTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACg                                              >  2:7915454/1‑93 (MQ=255)
                                              cTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACgg                                             >  2:7269034/1‑93 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                            >  2:1407091/1‑93 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                            >  2:7887023/1‑93 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                            >  2:5791916/1‑93 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                            >  2:3983666/1‑93 (MQ=255)
                                                aTTTCAACACGACGCCGCTGGGCCGCTCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTa                                           <  1:6264944/93‑1 (MQ=255)
                                                aTTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTa                                           <  2:1721647/93‑1 (MQ=255)
                                                     aaCACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCAcc                                      <  1:2653751/93‑1 (MQ=255)
                                                      acacGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCt                                     >  1:4705388/1‑93 (MQ=255)
                                                       cacGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTa                                    >  1:3818564/1‑93 (MQ=255)
                                                       cacGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTa                                    <  1:288899/93‑1 (MQ=255)
                                                        gcgacgaCGCTGTTCCGCGCAGTGGCTGGTTACACTCTGCTTGGTGCGATGAAAGAAGATGGCTGGAATATCTGGGGTGACGGGAGCACCTAc                                   <  2:5499693/92‑1 (MQ=255)
                                                         cgacgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                     <  1:7541727/58‑1 (MQ=255)
                                                                gcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGaaa                           >  1:1546035/1‑93 (MQ=255)
                                                                 cTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATCTCTGGGATGACGGTCGCACCTACAAAGGGAAc                          >  1:4048067/1‑93 (MQ=255)
                                                                 cTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAc                          <  1:3460647/93‑1 (MQ=255)
                                                                 cTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAc                          <  1:284296/93‑1 (MQ=255)
                                                                   gggCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGa                        >  1:2343091/1‑93 (MQ=255)
                                                                       cgcgCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATc                    <  2:6301625/93‑1 (MQ=255)
                                                                        gcgcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCg                   <  1:6324841/93‑1 (MQ=255)
                                                                        gcgcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCg                   >  2:3250345/1‑93 (MQ=255)
                                                                        gcgcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCg                   >  2:6136118/1‑93 (MQ=255)
                                                                         cgcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGa                  <  1:7663566/93‑1 (MQ=255)
                                                                          gcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGaa                 <  1:2492213/93‑1 (MQ=255)
                                                                           ccGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAc                <  1:5776916/93‑1 (MQ=255)
                                                                             gTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGt              >  2:3470008/1‑93 (MQ=255)
                                                                             gTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGt              >  1:4463775/1‑93 (MQ=255)
                                                                              tGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGtt             >  2:4152082/1‑93 (MQ=255)
                                                                              tGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGtt             >  1:3115230/1‑93 (MQ=255)
                                                                              tGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATAGAACGtt             >  1:1701034/1‑93 (MQ=255)
                                                                              ggACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGtt             <  1:7450933/92‑1 (MQ=255)
                                                                                aCTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTc           <  1:2027910/93‑1 (MQ=255)
                                                                                aCTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTc           >  1:6163950/1‑93 (MQ=255)
                                                                                 cTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCt          <  1:6140066/93‑1 (MQ=255)
                                                                                 cTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCt          <  1:594867/93‑1 (MQ=255)
                                                                                   ggTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACTATATCGAACGTTTCTAt        >  1:7022115/1‑93 (MQ=255)
                                                                                      aCCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGt     >  1:875933/1‑93 (MQ=255)
                                                                                       ccACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGtt    <  2:6420510/93‑1 (MQ=255)
                                                                                       ccACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGtt    <  2:3117104/93‑1 (MQ=255)
                                                                                          |                                                                                           
CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAT  >  NC_000913/3316525‑3316706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 216 total aligned reads displayed.
TGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGG  >  NC_000913/3316523‑3316708
                                                                                            |                                                                                             
TGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACG                                                                                              >  SRR4302543.6017025/1‑94 (MQ=60)
TGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACG                                                                                              >  SRR4302543.4498258/1‑94 (MQ=60)
TGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACG                                                                                              >  SRR4302543.1524314/1‑94 (MQ=60)
     CTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGT                                                                                         >  SRR4302543.3868876/1‑94 (MQ=60)
     CTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGT                                                                                         >  SRR4302543.5259264/1‑94 (MQ=60)
     CTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGT                                                                                         >  SRR4302543.5849282/1‑94 (MQ=60)
     CTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGT                                                                                         >  SRR4302543.5970658/1‑94 (MQ=60)
     CTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGT                                                                                         >  SRR4302543.1426285/1‑94 (MQ=60)
     CTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGT                                                                                         <  SRR4302543.3311175/94‑1 (MQ=60)
     CTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGT                                                                                         >  SRR4302543.2420138/1‑94 (MQ=60)
      TATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTT                                                                                        <  SRR4302543.1435675/94‑1 (MQ=60)
      TATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTT                                                                                        >  SRR4302543.918946/1‑94 (MQ=60)
        TTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGC                                                                                      <  SRR4302543.6345235/94‑1 (MQ=60)
          CAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTG                                                                                    >  SRR4302543.6198509/1‑94 (MQ=60)
          CAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTG                                                                                    <  SRR4302543.3137918/94‑1 (MQ=60)
          CAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTG                                                                                    >  SRR4302543.7534681/1‑94 (MQ=60)
           AGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCCACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGC                                                                                   >  SRR4302543.4309836/1‑94 (MQ=60)
            gttgggccCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCG                                                                                  <  SRR4302543.7574375/86‑1 (MQ=60)
            GTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCG                                                                                  <  SRR4302543.6378774/94‑1 (MQ=60)
            GTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCG                                                                                  <  SRR4302543.4339049/94‑1 (MQ=60)
            GTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCG                                                                                  >  SRR4302543.2278351/1‑94 (MQ=60)
            GTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCG                                                                                  <  SRR4302543.519126/94‑1 (MQ=60)
             TGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGA                                                                                 >  SRR4302543.1661424/1‑94 (MQ=60)
             TGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGA                                                                                 >  SRR4302543.4589428/1‑94 (MQ=60)
              GTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAT                                                                                <  SRR4302543.3209886/94‑1 (MQ=60)
              GTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAT                                                                                <  SRR4302543.294463/94‑1 (MQ=60)
               TGGCGCATTTCATAGCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATG                                                                               <  SRR4302543.6632805/94‑1 (MQ=60)
               TGGCGCATTTCATAACCCCACCGGCGGCCTGACCTATTTCAACCCGACGCCGCGGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATG                                                                               <  SRR4302543.114154/94‑1 (MQ=60)
               TGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATG                                                                               <  SRR4302543.1197606/94‑1 (MQ=60)
               TGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATG                                                                               <  SRR4302543.3582310/94‑1 (MQ=60)
                 GCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAA                                                                             <  SRR4302543.6776097/94‑1 (MQ=60)
                  CGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAA                                                                            >  SRR4302543.6172918/1‑94 (MQ=60)
                  CGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAA                                                                            <  SRR4302543.6182111/94‑1 (MQ=60)
                  CGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGGGACTGGTACCACGCTGGTTGCTGCGATGAAG                                                                            >  SRR4302543.2578080/1‑94 (MQ=60)
                  CGCATTTCAT‑ACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAG                                                                           <  SRR4302543.2488427/94‑1 (MQ=60)
                   GCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAG                                                                           <  SRR4302543.7899161/94‑1 (MQ=60)
                    CATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGA                                                                          <  SRR4302543.5597350/94‑1 (MQ=60)
                     ATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGGA                                                                         >  SRR4302543.6209789/1‑94 (MQ=60)
                     ATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAA                                                                         <  SRR4302543.6601019/94‑1 (MQ=60)
                      TTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAG                                                                        <  SRR4302543.7928896/94‑1 (MQ=60)
                      TTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAG                                                                        <  SRR4302543.823641/94‑1 (MQ=60)
                       TTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGA                                                                       >  SRR4302543.4365872/1‑94 (MQ=60)
                       TTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGA                                                                       >  SRR4302543.3207406/1‑94 (MQ=60)
                       TTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGA                                                                       <  SRR4302543.115416/94‑1 (MQ=60)
                       TTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGA                                                                       <  SRR4302543.5322913/94‑1 (MQ=60)
                       TTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGA                                                                       >  SRR4302543.2088258/1‑94 (MQ=60)
                        tattgatgaactgGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGAT                                                                      <  SRR4302543.7613602/81‑1 (MQ=60)
                        TCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGAT                                                                      >  SRR4302543.6434030/1‑94 (MQ=60)
                         CATAGCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATG                                                                     <  SRR4302543.4467829/94‑1 (MQ=60)
                         CATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATG                                                                     >  SRR4302543.6845410/1‑94 (MQ=60)
                         CATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATG                                                                     >  SRR4302543.2115825/1‑94 (MQ=60)
                         CATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATG                                                                     >  SRR4302543.781851/1‑94 (MQ=60)
                         CATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATG                                                                     <  SRR4302543.6706957/94‑1 (MQ=60)
                          ATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGG                                                                    >  SRR4302543.6481008/1‑94 (MQ=60)
                          ATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGG                                                                    <  SRR4302543.1607224/94‑1 (MQ=60)
                           TAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGC                                                                   <  SRR4302543.4167081/94‑1 (MQ=60)
                            AACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCG                                                                  <  SRR4302543.6423532/94‑1 (MQ=60)
                            AACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCG                                                                  >  SRR4302543.1462372/1‑94 (MQ=60)
                              CGCCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTG                                                                <  SRR4302543.2751380/94‑1 (MQ=60)
                              CACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTG                                                                >  SRR4302543.3285731/1‑94 (MQ=60)
                               ACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGA                                                               >  SRR4302543.285174/1‑94 (MQ=60)
                                CCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAA                                                              >  SRR4302543.1597195/1‑94 (MQ=60)
                                CCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAA                                                              >  SRR4302543.6602426/1‑94 (MQ=60)
                                 CACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGGAT                                                             >  SRR4302543.7131028/1‑94 (MQ=60)
                                 CACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAAT                                                             >  SRR4302543.1691588/1‑94 (MQ=60)
                                 CACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAAT                                                             <  SRR4302543.4288890/94‑1 (MQ=60)
                                 CACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAAT                                                             <  SRR4302543.1711169/94‑1 (MQ=60)
                                 CACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAAA                                                             >  SRR4302543.7131026/1‑94 (MQ=60)
                                  ACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATA                                                            <  SRR4302543.7424459/94‑1 (MQ=60)
                                  ACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATA                                                            <  SRR4302543.7733924/94‑1 (MQ=60)
                                   CCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATAT                                                           <  SRR4302543.5897328/94‑1 (MQ=60)
                                   CCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATAT                                                           >  SRR4302543.6795782/1‑94 (MQ=60)
                                   CCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATAT                                                           >  SRR4302543.6795781/1‑94 (MQ=60)
                                   CCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATAT                                                           <  SRR4302543.7826548/94‑1 (MQ=60)
                                   CCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATAT                                                           <  SRR4302543.5752021/94‑1 (MQ=60)
                                   CCGGCGGCCTGACATATTTCAACTCGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATAT                                                           <  SRR4302543.5709514/94‑1 (MQ=60)
                                    CGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATC                                                          <  SRR4302543.6824008/94‑1 (MQ=60)
                                    CGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATC                                                          >  SRR4302543.7612581/1‑94 (MQ=60)
                                    CGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATC                                                          <  SRR4302543.3193511/94‑1 (MQ=60)
                                     GGCGGCCTGACCTATTTCAACACGACGCCTCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCT                                                         <  SRR4302543.2739204/94‑1 (MQ=60)
                                     GGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCT                                                         <  SRR4302543.357689/94‑1 (MQ=60)
                                     GGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCT                                                         <  SRR4302543.5905753/94‑1 (MQ=60)
                                       CGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGG                                                       >  SRR4302543.2248869/1‑94 (MQ=60)
                                       CGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGG                                                       <  SRR4302543.4246300/94‑1 (MQ=60)
                                        GGCCTGCCCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGG                                                      <  SRR4302543.1650032/94‑1 (MQ=60)
                                        GGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGG                                                      <  SRR4302543.2108271/94‑1 (MQ=60)
                                        GGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGG                                                      <  SRR4302543.612531/94‑1 (MQ=60)
                                        GGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGG                                                      <  SRR4302543.3125207/94‑1 (MQ=60)
                                         GCCTGCCCTCTTTCCACCCGCCGCCGCTGGGCCGCGCCGTGACTGGTACCGCGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGG                                                     <  SRR4302543.6069341/94‑1 (MQ=60)
                                         GCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGG                                                     <  SRR4302543.7250214/94‑1 (MQ=60)
                                          CCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGT                                                    <  SRR4302543.7890994/94‑1 (MQ=60)
                                          CCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGT                                                    <  SRR4302543.6208097/94‑1 (MQ=60)
                                          CCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGT                                                    >  SRR4302543.5251753/1‑94 (MQ=60)
                                          CCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGG                                                    >  SRR4302543.86646/1‑94 (MQ=60)
                                          CCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGG                                                    >  SRR4302543.6789612/1‑94 (MQ=60)
                                           ctacccttttccaaccggacgcgcggGGGCCGCGCCGTGCCTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTG                                                   <  SRR4302543.2987807/68‑1 (MQ=60)
                                           CTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTG                                                   >  SRR4302543.5511769/1‑94 (MQ=60)
                                           CTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTG                                                   <  SRR4302543.6518109/94‑1 (MQ=60)
                                           CTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTG                                                   >  SRR4302543.4603081/1‑94 (MQ=60)
                                           CTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTG                                                   >  SRR4302543.6850165/1‑94 (MQ=60)
                                           CTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTG                                                   >  SRR4302543.5874800/1‑94 (MQ=60)
                                           CTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTG                                                   >  SRR4302543.8005646/1‑94 (MQ=60)
                                            TGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGA                                                  >  SRR4302543.5083942/1‑94 (MQ=60)
                                             GACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGAC                                                 >  SRR4302543.1593828/1‑94 (MQ=60)
                                             GACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGAC                                                 >  SRR4302543.3830934/1‑94 (MQ=60)
                                               CCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGG                                               <  SRR4302543.214808/94‑1 (MQ=60)
                                                CTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGT                                              <  SRR4302543.223828/94‑1 (MQ=60)
                                                CTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGT                                              <  SRR4302543.2127030/94‑1 (MQ=60)
                                                CTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGGGACGGT                                              >  SRR4302543.3237707/1‑94 (MQ=60)
                                                  ATTTCAACACGACGCCGCTGGGCCGCTCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAG                                            <  SRR4302543.6324014/94‑1 (MQ=60)
                                                  ATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAG                                            >  SRR4302543.6705672/1‑94 (MQ=60)
                                                      CAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACC                                        >  SRR4302543.5738046/1‑94 (MQ=60)
                                                       AACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCT                                       <  SRR4302543.2677809/94‑1 (MQ=60)
                                                       AACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCT                                       >  SRR4302543.4748380/1‑94 (MQ=60)
                                                        ACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTA                                      >  SRR4302543.3852238/1‑94 (MQ=60)
                                                         CACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAC                                     >  SRR4302543.1582457/1‑94 (MQ=60)
                                                         CACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAC                                     <  SRR4302543.291476/94‑1 (MQ=60)
                                                         CACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAC                                     >  SRR4302543.7440605/1‑94 (MQ=60)
                                                         CACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAC                                     >  SRR4302543.1284523/1‑94 (MQ=60)
                                                           CGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAA                                   >  SRR4302543.161268/1‑94 (MQ=60)
                                                             ACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCGACAAAG                                 <  SRR4302543.799262/94‑1 (MQ=60)
                                                              CGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGG                                <  SRR4302543.4208950/94‑1 (MQ=60)
                                                               GCCGCTCGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGA                               <  SRR4302543.1423652/94‑1 (MQ=60)
                                                                  GCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATCTCTGGGATGACGGTCGCACCTACAAAGGGAAC                            >  SRR4302543.4084289/1‑94 (MQ=60)
                                                                  GCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAC                            <  SRR4302543.7339264/94‑1 (MQ=60)
                                                                  GCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAC                            >  SRR4302543.4084291/1‑94 (MQ=60)
                                                                  GCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAC                            <  SRR4302543.3437647/94‑1 (MQ=60)
                                                                   CTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTCCAAAGGAAACG                           >  SRR4302543.4126779/1‑94 (MQ=60)
                                                                   CTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACG                           <  SRR4302543.3491647/94‑1 (MQ=60)
                                                                   CTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACG                           >  SRR4302543.4126781/1‑94 (MQ=60)
                                                                   CTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACG                           <  SRR4302543.5500241/94‑1 (MQ=60)
                                                                    TGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGA                          >  SRR4302543.6333786/1‑94 (MQ=60)
                                                                     GGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGAT                         <  SRR4302543.3923621/94‑1 (MQ=60)
                                                                     GGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGAT                         >  SRR4302543.5294298/1‑94 (MQ=60)
                                                                     GGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGAT                         <  SRR4302543.2029106/94‑1 (MQ=60)
                                                                     GGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATAGCTGGGGTGACGGTAGCACCTACACAGGCAACGAT                         >  SRR4302543.5294299/1‑94 (MQ=60)
                                                                      GGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATA                        <  SRR4302543.7121742/94‑1 (MQ=60)
                                                                      GGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATA                        <  SRR4302543.7676615/94‑1 (MQ=60)
                                                                      GGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATA                        <  SRR4302543.6279120/94‑1 (MQ=60)
                                                                       GCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATAT                       <  SRR4302543.1830361/94‑1 (MQ=60)
                                                                       GCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATAT                       >  SRR4302543.6040254/1‑94 (MQ=60)
                                                                        CCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATC                      <  SRR4302543.79844/94‑1 (MQ=60)
                                                                         CGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCG                     >  SRR4302543.6445313/1‑94 (MQ=60)
                                                                         CGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCA                     >  SRR4302543.1732235/1‑94 (MQ=60)
                                                                          GCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGA                    >  SRR4302543.3566744/1‑94 (MQ=60)
                                                                          GCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGA                    <  SRR4302543.6384326/94‑1 (MQ=60)
                                                                          GCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGA                    <  SRR4302543.6384331/94‑1 (MQ=60)
                                                                           CGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAA                   <  SRR4302543.7736211/94‑1 (MQ=60)
                                                                           CGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAA                   <  SRR4302543.6857186/94‑1 (MQ=60)
                                                                           CGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAA                   <  SRR4302543.7736210/94‑1 (MQ=60)
                                                                            GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC                  <  SRR4302543.2340375/94‑1 (MQ=60)
                                                                            GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC                  <  SRR4302543.1979568/94‑1 (MQ=60)
                                                                            GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC                  >  SRR4302543.3695084/1‑94 (MQ=60)
                                                                            GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC                  >  SRR4302543.2596885/1‑94 (MQ=60)
                                                                            GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC                  <  SRR4302543.2514807/94‑1 (MQ=60)
                                                                            GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC                  <  SRR4302543.2514556/94‑1 (MQ=60)
                                                                            GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC                  >  SRR4302543.6123297/1‑94 (MQ=60)
                                                                            GCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAC                  >  SRR4302543.2906412/1‑94 (MQ=60)
                                                                             CCGTGACTGGTGCCACGCTGGTTGCTGCGATGAGAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACG                 <  SRR4302543.5460099/94‑1 (MQ=60)
                                                                             CCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACG                 >  SRR4302543.2890321/1‑94 (MQ=60)
                                                                             CCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACG                 <  SRR4302543.5829498/94‑1 (MQ=60)
                                                                              CGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGT                >  SRR4302543.4504224/1‑94 (MQ=60)
                                                                              CGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGT                <  SRR4302543.4951006/94‑1 (MQ=60)
                                                                               GTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTT               >  SRR4302543.3143252/1‑94 (MQ=60)
                                                                               GTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTT               >  SRR4302543.7796960/1‑94 (MQ=60)
                                                                               GTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATAGAACGTT               >  SRR4302543.1716274/1‑94 (MQ=60)
                                                                                TGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTT              <  SRR4302543.3185477/94‑1 (MQ=60)
                                                                                TGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTT              >  SRR4302543.6734594/1‑94 (MQ=60)
                                                                                TGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTT              >  SRR4302543.1899971/1‑94 (MQ=60)
                                                                                GGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTT              <  SRR4302543.7522330/94‑1 (MQ=60)
                                                                                 GACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTC             <  SRR4302543.5143392/94‑1 (MQ=60)
                                                                                 GACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTC             <  SRR4302543.3673358/94‑1 (MQ=60)
                                                                                 GACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTC             >  SRR4302543.6222282/1‑94 (MQ=60)
                                                                                  ACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCT            <  SRR4302543.2046138/94‑1 (MQ=60)
                                                                                  ACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCT            <  SRR4302543.7291373/94‑1 (MQ=60)
                                                                                  ACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCT            <  SRR4302543.4325163/94‑1 (MQ=60)
                                                                                   CTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTA           >  SRR4302543.1171473/1‑94 (MQ=60)
                                                                                   CTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTA           <  SRR4302543.6904830/94‑1 (MQ=60)
                                                                                   CTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTA           <  SRR4302543.6198221/94‑1 (MQ=60)
                                                                                    TGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACTATATCGAACGTTTCTAT          >  SRR4302543.7089384/1‑94 (MQ=60)
                                                                                    TGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTAT          <  SRR4302543.5714122/94‑1 (MQ=60)
                                                                                    TGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTAT          >  SRR4302543.4745012/1‑94 (MQ=60)
                                                                                    GGGTACCACGCTGGGAGCTGCGTTGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACTATATCGAACGCTGCTAT          >  SRR4302543.7089386/1‑94 (MQ=60)
                                                                                     GGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATC         >  SRR4302543.1466920/1‑94 (MQ=60)
                                                                                     GGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATC         <  SRR4302543.5844609/94‑1 (MQ=60)
                                                                                      GTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCG        <  SRR4302543.3340854/94‑1 (MQ=60)
                                                                                      GTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCG        <  SRR4302543.5083205/94‑1 (MQ=60)
                                                                                       TACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGT       >  SRR4302543.6389088/1‑94 (MQ=60)
                                                                                       TACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGT       >  SRR4302543.883726/1‑94 (MQ=60)
                                                                                         CCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTA     >  SRR4302543.1396672/1‑94 (MQ=60)
                                                                                         CCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTA     >  SRR4302543.404658/1‑94 (MQ=60)
                                                                                          CATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGCAGCACCTACAAAGGCAACGATATCGAACGTTTCTATCGTTAT    >  SRR4302543.5482479/1‑94 (MQ=60)
                                                                                          CACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAT    >  SRR4302543.2400908/1‑94 (MQ=60)
                                                                                          CACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAT    <  SRR4302543.4410530/94‑1 (MQ=60)
                                                                                          CACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAT    <  SRR4302543.6944721/94‑1 (MQ=60)
                                                                                           ACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATG   >  SRR4302543.3543825/1‑94 (MQ=60)
                                                                                           ACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATG   >  SRR4302543.1383424/1‑94 (MQ=60)
                                                                                           ACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATG   <  SRR4302543.237604/94‑1 (MQ=60)
                                                                                            CGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGG  >  SRR4302543.687645/1‑94 (MQ=60)
                                                                                            CGCTGGTTGCTGCGACGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGG  <  SRR4302543.6103814/94‑1 (MQ=60)
                                                                                            |                                                                                             
TGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGG  >  NC_000913/3316523‑3316708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑