Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,334,354 |
T→C |
I36V (ATT→GTT) |
yrbA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,334,354 | 0 | T | C | 100.0%
| 625.1
/ NA
| 195 | I36V (ATT→GTT) | yrbA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (102/93); total (102/93) |
Only 100 of 210 total aligned reads displayed.
GGTTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAATAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCA > NC_000913/3334264‑3334443
|
ggTTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGcaacaa < 1:1177634/93‑1 (MQ=255)
cgTTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGcaacaa < 2:3132658/92‑1 (MQ=255)
gTTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCaacaac > 2:1504525/1‑93 (MQ=255)
ttATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAAcc < 2:808542/93‑1 (MQ=255)
ttATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAAcc > 2:2835686/1‑93 (MQ=255)
tATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCt > 1:4355486/1‑93 (MQ=255)
tATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCt > 1:3511472/1‑93 (MQ=255)
tATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCt < 1:736550/93‑1 (MQ=255)
aTCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTg < 2:2936469/93‑1 (MQ=255)
tCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGa > 2:276892/1‑93 (MQ=255)
gCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAg > 2:1167769/1‑93 (MQ=255)
cAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGt < 1:3041858/93‑1 (MQ=255)
aaTATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTg > 2:3621987/1‑93 (MQ=255)
tatatTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGc > 2:84387/1‑93 (MQ=255)
tatatTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGc < 1:4256751/93‑1 (MQ=255)
atatTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCt > 1:124379/1‑93 (MQ=255)
tatTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTg > 2:3478847/1‑93 (MQ=255)
tatTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTg > 1:3359685/1‑93 (MQ=255)
ttCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGcc > 1:3092153/1‑93 (MQ=255)
ttCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGcc > 2:623015/1‑93 (MQ=255)
ccATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCAt > 1:3446399/1‑93 (MQ=255)
cATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATc > 2:592025/1‑93 (MQ=255)
cATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATc < 1:3011729/93‑1 (MQ=255)
tCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGc < 1:4372885/93‑1 (MQ=255)
aGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCg > 1:568657/1‑93 (MQ=255)
gCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCgg > 2:1101442/1‑93 (MQ=255)
gACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGaaa > 2:1771628/1‑93 (MQ=255)
gACCATAGACCATCGGCTGTTTTTAAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGaaa < 1:4296750/93‑1 (MQ=255)
aCCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAAc < 2:3672697/93‑1 (MQ=255)
aCCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAAc < 1:2529993/93‑1 (MQ=255)
aTAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTg < 2:4613943/93‑1 (MQ=255)
tAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTgg < 1:1818390/93‑1 (MQ=255)
gACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGAc > 1:3189222/1‑93 (MQ=255)
gACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGAc > 2:2850666/1‑93 (MQ=255)
gACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGAc < 1:3545118/93‑1 (MQ=255)
gACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGAc > 1:980868/1‑93 (MQ=255)
gACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGAc > 1:1114531/1‑93 (MQ=255)
aCCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCCCCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACt < 1:1635904/93‑1 (MQ=255)
aCCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACt > 2:2710023/1‑93 (MQ=255)
tCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCt > 1:3145825/1‑93 (MQ=255)
tCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCt > 1:2613990/1‑93 (MQ=255)
tCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCt > 1:2678976/1‑93 (MQ=255)
gctgTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggg > 2:1859620/1‑92 (MQ=255)
gctgTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTgga < 2:3195065/93‑1 (MQ=255)
gctgTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTgga > 1:716976/1‑93 (MQ=255)
ctgTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggag < 1:2358652/93‑1 (MQ=255)
tgTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggagg > 1:3588670/1‑93 (MQ=255)
gTTTTTTAACCCGTCTGATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggaggg < 2:2948929/93‑1 (MQ=255)
gTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggaggg > 2:2302102/1‑93 (MQ=255)
gTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggaggg < 2:1461909/93‑1 (MQ=255)
ttttttAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggagggg > 2:2436691/1‑92 (MQ=255)
ttttttAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggaggga < 1:401318/93‑1 (MQ=255)
ttttttAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggaggga > 2:3593492/1‑93 (MQ=255)
tttttAACCCGACTCATGCCGTCAAACATCTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTggagggag < 1:133741/93‑1 (MQ=255)
tAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGagagag < 1:283005/93‑1 (MQ=255)
tAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGagagag < 2:3738127/93‑1 (MQ=255)
tAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGagagag > 1:2864903/1‑93 (MQ=255)
aCCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCg < 1:3556120/93‑1 (MQ=255)
ccGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCggt > 2:1157815/1‑91 (MQ=255)
ccGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGtt < 1:1922070/93‑1 (MQ=255)
cGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTtc < 1:3835526/93‑1 (MQ=255)
gACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTtca > 2:4211835/1‑93 (MQ=255)
gACTCATACCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTtca < 2:436043/93‑1 (MQ=255)
aCTCATGCAGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGGGGtcat > 2:101359/1‑93 (MQ=255)
cTCATGCCGTCAAACAACTTACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTtcatc > 2:4581657/1‑93 (MQ=255)
cTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTtcatc < 1:1364443/93‑1 (MQ=255)
cTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTtcatc < 2:2550893/93‑1 (MQ=255)
cTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTtcatc > 2:2628766/1‑93 (MQ=255)
tCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTtcatca > 2:3306217/1‑93 (MQ=255)
cATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCaa > 1:4172967/1‑93 (MQ=255)
cATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCaa > 1:4507060/1‑93 (MQ=255)
tGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAaca < 1:2641261/93‑1 (MQ=255)
gCCGTCAAACAACTCGCCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAacac < 1:1402937/93‑1 (MQ=255)
gCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAacac > 1:2854305/1‑93 (MQ=255)
gCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAacac < 1:3481220/93‑1 (MQ=255)
tCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGctc > 2:1630266/1‑93 (MQ=255)
cAAACACCTCACCCACGGCAACATCGTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGctct < 2:2055313/93‑1 (MQ=255)
cAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGctct < 1:930704/93‑1 (MQ=255)
cAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGACGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGctct < 1:3242419/93‑1 (MQ=255)
aaaCAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTg > 1:3695445/1‑93 (MQ=255)
aaaCAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTg > 2:4103282/1‑93 (MQ=255)
acaacTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGaa < 2:4521109/93‑1 (MQ=255)
acaacTCACACACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGaa < 1:1521456/93‑1 (MQ=255)
caacTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAAt < 1:3678271/93‑1 (MQ=255)
aacTCCCCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAAtt < 2:4169939/93‑1 (MQ=255)
aacTCACCCACGGCAACAGCCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAAtt < 1:1314368/93‑1 (MQ=255)
aacTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAAtt > 1:3505365/1‑93 (MQ=255)
acTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGCGAGCGGTCATCAACACGCTCTGAAttt > 2:117802/1‑93 (MQ=255)
aCCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCatt < 1:441198/93‑1 (MQ=255)
ccccCGGCAACAACCTGAAAGTTGCTGCCATCGCCGGAACCGTGGACTTCCTGGAGGGAGAGAGTTTTCATCAACACGCTCTGAATTTCatta < 2:879233/93‑1 (MQ=255)
cccACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCatta < 1:2948561/93‑1 (MQ=255)
ccACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCattat > 2:529691/1‑93 (MQ=255)
ccACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAACTTCattat > 2:4599303/1‑93 (MQ=255)
cACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCattatt < 1:1740239/93‑1 (MQ=255)
aCGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTAttt < 2:4057342/93‑1 (MQ=255)
aCGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTAttt > 1:880178/1‑93 (MQ=255)
cGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTAtttt < 2:4452874/93‑1 (MQ=255)
ggCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTc < 1:1261450/93‑1 (MQ=255)
gCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTcc > 1:2466793/1‑93 (MQ=255)
caacaaCCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCa < 1:2731752/93‑1 (MQ=255)
|
GGTTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAATAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCA > NC_000913/3334264‑3334443
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAATAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGGG > NC_000913/3334264‑3334447
|
GGTTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAAC < SRR4302535.1186037/94‑1 (MQ=60)
GGTTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAAC > SRR4302535.444189/1‑94 (MQ=60)
TTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCT > SRR4302535.4385301/1‑94 (MQ=60)
TTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCT > SRR4302535.3535870/1‑94 (MQ=60)
TTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCA > SRR4302535.2073910/1‑94 (MQ=60)
TATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTG < SRR4302535.741728/94‑1 (MQ=60)
CCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAA > SRR4302535.328286/1‑94 (MQ=60)
CGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAG < SRR4302535.169162/94‑1 (MQ=60)
CAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTG < SRR4302535.3063171/94‑1 (MQ=60)
CAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTG < SRR4302535.425331/94‑1 (MQ=60)
ATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGC > SRR4302535.1527209/1‑94 (MQ=60)
TATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCT > SRR4302535.125252/1‑94 (MQ=60)
TATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCT < SRR4302535.4285915/94‑1 (MQ=60)
ATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTG > SRR4302535.3383070/1‑94 (MQ=60)
ATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCC > SRR4302535.3113687/1‑94 (MQ=60)
TCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCAT > SRR4302535.3470366/1‑94 (MQ=60)
CCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATC < SRR4302535.3583200/94‑1 (MQ=60)
CCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATC > SRR4302535.2924784/1‑94 (MQ=60)
CATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCG > SRR4302535.1411125/1‑94 (MQ=60)
CATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCG < SRR4302535.3032832/94‑1 (MQ=60)
TCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCC < SRR4302535.4402803/94‑1 (MQ=60)
CAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCG > SRR4302535.572651/1‑94 (MQ=60)
AGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGG < SRR4302535.4303870/94‑1 (MQ=60)
GACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAAC < SRR4302535.1646483/94‑1 (MQ=60)
GACCATAGACCATCGGCTGTTTTTAAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAAC < SRR4302535.4326154/94‑1 (MQ=60)
ACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACG < SRR4302535.1713718/94‑1 (MQ=60)
ACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACG < SRR4302535.2548223/94‑1 (MQ=60)
CATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTG < SRR4302535.3251824/94‑1 (MQ=60)
CATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTG < SRR4302535.318564/94‑1 (MQ=60)
ATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGG > SRR4302535.2642865/1‑94 (MQ=60)
ATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGG > SRR4302535.2880299/1‑94 (MQ=60)
TAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGA < SRR4302535.1831531/94‑1 (MQ=60)
AGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGAC < SRR4302535.4396003/94‑1 (MQ=60)
AGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGAC > SRR4302535.3211276/1‑94 (MQ=60)
AGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGAC > SRR4302535.987837/1‑94 (MQ=60)
AGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGAC > SRR4302535.1122476/1‑94 (MQ=60)
GACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACT < SRR4302535.3569736/94‑1 (MQ=60)
ACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCCCCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTT < SRR4302535.1647725/94‑1 (MQ=60)
GTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCT > SRR4302535.2632737/1‑94 (MQ=60)
GTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCT > SRR4302535.2698144/1‑94 (MQ=60)
GTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCT > SRR4302535.3167701/1‑94 (MQ=60)
TGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGA > SRR4302535.722011/1‑94 (MQ=60)
GCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAG < SRR4302535.3075542/94‑1 (MQ=60)
CTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGG > SRR4302535.3613562/1‑94 (MQ=60)
CTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGG < SRR4302535.2375573/94‑1 (MQ=60)
TGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGG > SRR4302535.924790/1‑94 (MQ=60)
TGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGG > SRR4302535.1365544/1‑94 (MQ=60)
TGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGG > SRR4302535.1343521/1‑94 (MQ=60)
TTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAG < SRR4302535.1001479/94‑1 (MQ=60)
TTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAG > SRR4302535.3505507/1‑94 (MQ=60)
TTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAG < SRR4302535.404131/94‑1 (MQ=60)
TTTTTAACCCGACTCATGCCGTCAAACATCTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGA < SRR4302535.134676/94‑1 (MQ=60)
TTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAG > SRR4302535.937358/1‑94 (MQ=60)
TTTACCCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGA < SRR4302535.1774202/94‑1 (MQ=60)
TTAACCCGACTCATGCCGTCAAACAACTCCCCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAG < SRR4302535.3474196/94‑1 (MQ=60)
TTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAG < SRR4302535.129806/94‑1 (MQ=60)
TTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAG < SRR4302535.3044783/94‑1 (MQ=60)
TTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAG > SRR4302535.2885198/1‑94 (MQ=60)
TAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGC < SRR4302535.284979/94‑1 (MQ=60)
ACCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGT < SRR4302535.3580785/94‑1 (MQ=60)
CCCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTT > SRR4302535.615004/1‑94 (MQ=60)
CCGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTC < SRR4302535.1935926/94‑1 (MQ=60)
CGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCA > SRR4302535.1252849/1‑94 (MQ=60)
CGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCA < SRR4302535.3861974/94‑1 (MQ=60)
CGACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCA > SRR4302535.2789847/1‑94 (MQ=60)
GACTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCAT < SRR4302535.1218215/94‑1 (MQ=60)
CTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCA < SRR4302535.1374201/94‑1 (MQ=60)
CTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCA < SRR4302535.418038/94‑1 (MQ=60)
CTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCA > SRR4302535.878085/1‑94 (MQ=60)
CTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCA < SRR4302535.4002357/94‑1 (MQ=60)
CTCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCA > SRR4302535.2383801/1‑94 (MQ=60)
TCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAA > SRR4302535.4201527/1‑94 (MQ=60)
TCATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAA > SRR4302535.4537994/1‑94 (MQ=60)
CATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAAC < SRR4302535.2692495/94‑1 (MQ=60)
ATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACA > SRR4302535.4589775/1‑94 (MQ=60)
ATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACA > SRR4302535.3575349/1‑94 (MQ=60)
ATGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACA < SRR4302535.3404912/94‑1 (MQ=60)
TGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACAC < SRR4302535.2660180/94‑1 (MQ=60)
TGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACAC > SRR4302535.2874521/1‑94 (MQ=60)
TGCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACAC > SRR4302535.2874522/1‑94 (MQ=60)
GCCGTCAAACAACTCGCCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACG < SRR4302535.1412945/94‑1 (MQ=60)
GCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACG < SRR4302535.4384119/94‑1 (MQ=60)
GCCGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACG < SRR4302535.3505400/94‑1 (MQ=60)
CGTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCT > SRR4302535.3844573/1‑94 (MQ=60)
GTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTC > SRR4302535.250544/1‑94 (MQ=60)
GTCAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTC > SRR4302535.3534438/1‑94 (MQ=60)
TCAAACAACTCGCCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCT < SRR4302535.1902677/94‑1 (MQ=60)
CAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTG < SRR4302535.937285/94‑1 (MQ=60)
CAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTG > SRR4302535.3721024/1‑94 (MQ=60)
CAAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGACGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTG < SRR4302535.3264941/94‑1 (MQ=60)
AAACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGA < SRR4302535.2980212/94‑1 (MQ=60)
ACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAAT < SRR4302535.583309/94‑1 (MQ=60)
ACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAAT < SRR4302535.2745884/94‑1 (MQ=60)
ACAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAAT < SRR4302535.2755981/94‑1 (MQ=60)
ACAACTCACACACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAAT < SRR4302535.1532414/94‑1 (MQ=60)
CAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATT < SRR4302535.355046/94‑1 (MQ=60)
CAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATT < SRR4302535.3703730/94‑1 (MQ=60)
CAACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATT > SRR4302535.3529725/1‑94 (MQ=60)
AACTCACCCACGGCAACAGCCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTT < SRR4302535.1323761/94‑1 (MQ=60)
AACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTT > SRR4302535.1155143/1‑94 (MQ=60)
AACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTT > SRR4302535.3136381/1‑94 (MQ=60)
AACTCACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTT > SRR4302535.37233/1‑94 (MQ=60)
ACCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTA < SRR4302535.444287/94‑1 (MQ=60)
CCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGCGAGAGCGTTCATCAACACGCTCCGAATTTCATTAT > SRR4302535.3628715/1‑94 (MQ=60)
CCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTAT < SRR4302535.2969276/94‑1 (MQ=60)
CCCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTAT < SRR4302535.732068/94‑1 (MQ=60)
CCACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATT < SRR4302535.3371709/94‑1 (MQ=60)
CACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTT > SRR4302535.886410/1‑94 (MQ=60)
CACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTT < SRR4302535.1752816/94‑1 (MQ=60)
CACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTT > SRR4302535.3803880/1‑94 (MQ=60)
ACGGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTT < SRR4302535.4499859/94‑1 (MQ=60)
GGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCC > SRR4302535.2484575/1‑94 (MQ=60)
GGCAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCC < SRR4302535.1270475/94‑1 (MQ=60)
CAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCAT > SRR4302535.680885/1‑94 (MQ=60)
CAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCAT < SRR4302535.2751254/94‑1 (MQ=60)
CAACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCAT < SRR4302535.260060/94‑1 (MQ=60)
AACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATG > SRR4302535.2888824/1‑94 (MQ=60)
AACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATG < SRR4302535.310599/94‑1 (MQ=60)
ACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGG < SRR4302535.508313/94‑1 (MQ=60)
ACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGG < SRR4302535.4593098/94‑1 (MQ=60)
ACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGG < SRR4302535.4553430/94‑1 (MQ=60)
ACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGG > SRR4302535.2982668/1‑94 (MQ=60)
ACAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGG < SRR4302535.3711973/94‑1 (MQ=60)
CAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGGG > SRR4302535.2777180/1‑94 (MQ=60)
CAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGGG < SRR4302535.1818739/94‑1 (MQ=60)
CAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGGG < SRR4302535.3718455/94‑1 (MQ=60)
|
GGTTATCCGCAATATATTCCATCAGCGGACCATAGACCGTCTGCTGTTTTTTAACCCGACTCATGCCGTCAAACAACTCACCCACGGCAATAACCTGAAAGTGGCTGCCATCGCCGGAAACGTGGACTTCCTGGAGGGAGAGAGCGTTCATCAACACGCTCTGAATTTCATTATTTTCCATGGG > NC_000913/3334264‑3334447
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
