Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,337,699	T→C	Q3R (CAG→CGG)	yrbF ←	putative ATP‑binding component of a transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,337,699	0	T	C	99.7%	1147.7 / ‑5.2	365	Q3R (CAG→CGG)	yrbF	putative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (189/175); total (189/176)
Fisher's exact test for biased strand distribution p-value = 4.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.99e-01

Only 100 of 375 total aligned reads displayed.

CGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACTGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACC  >  NC_000913/3337609‑3337788

cgcgGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCGCGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGc                                                                                         <  1:7855940/93‑1 (MQ=255)

  cgGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTAGCCACAGACCGCTc                                                                                       <  2:1495233/93‑1 (MQ=255)

   ggCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCAACTAAATTCGCCACAGACCGCTcc                                                                                      <  1:2779476/93‑1 (MQ=255)

    gCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCa                                                                                     >  2:5368680/1‑93 (MQ=255)

       cGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATaa                                                                                  >  2:4180754/1‑93 (MQ=255)

       cGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATaa                                                                                  <  2:1830308/93‑1 (MQ=255)

        ggTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAAt                                                                                 <  1:4759686/93‑1 (MQ=255)

        ggTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAAt                                                                                 <  2:5053221/93‑1 (MQ=255)

         gTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAAtt                                                                                >  1:5013883/1‑93 (MQ=255)

         gTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAAtt                                                                                <  2:488178/93‑1 (MQ=255)

          tCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTc                                                                               >  1:449384/1‑93 (MQ=255)

           cAGGAAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACTGCTCCATAATTCa                                                                              <  1:7375777/93‑1 (MQ=255)

            aGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCAc                                                                             >  2:6644160/1‑93 (MQ=255)

             gggAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCAcc                                                                            <  1:3281051/93‑1 (MQ=255)

             gggAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCAcc                                                                            <  1:1638821/93‑1 (MQ=255)

               gAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCt                                                                          <  2:7269998/93‑1 (MQ=255)

                aaaTATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCAcccat                                                                         >  1:6145000/1‑91 (MQ=255)

                aaaTATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCtt                                                                         >  2:3382186/1‑93 (MQ=255)

                 aaTATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTc                                                                        >  2:2705009/1‑93 (MQ=255)

                   tattatCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGt                                                                      >  2:2302858/1‑93 (MQ=255)

                   tattatCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGt                                                                      <  2:3949141/93‑1 (MQ=255)

                    attatCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTc                                                                     >  1:6586735/1‑93 (MQ=255)

                     ttatCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCt                                                                    <  1:4936033/93‑1 (MQ=255)

                        tCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGc                                                                 <  2:3139619/93‑1 (MQ=255)

                        tCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGc                                                                 >  2:6289683/1‑93 (MQ=255)

                         cGAAGATGCAGCGATTGCCAAGCGTAAAACTGACATCGCTCATATCGAATAAATTCGCCACAGACCGCTCCATAATTCTCCCTTCGTCTTGCg                                                                <  2:2981652/93‑1 (MQ=255)

                           aaGATGCAGCGCTTGCCACGCGTAAAGCTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGtt                                                              <  2:6036300/93‑1 (MQ=255)

                           aaGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGtt                                                              >  1:983277/1‑93 (MQ=255)

                           aaGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGtt                                                              <  1:7091618/93‑1 (MQ=255)

                            aGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTg                                                             <  1:4522654/93‑1 (MQ=255)

                            aGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTg                                                             <  2:857332/93‑1 (MQ=255)

                             gATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGa                                                            >  1:800167/1‑93 (MQ=255)

                             gATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGa                                                            <  2:2902281/93‑1 (MQ=255)

                             gATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGa                                                            >  2:4815680/1‑93 (MQ=255)

                                 cAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGAtttt                                                        >  2:6830238/1‑93 (MQ=255)

                                 cAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGAtttt                                                        >  1:7476216/1‑93 (MQ=255)

                                  aGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTc                                                       <  1:1339967/93‑1 (MQ=255)

                                  aGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTc                                                       >  1:5847476/1‑93 (MQ=255)

                                    cGATTGCCACGCGTACAGCTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCtc                                                     <  2:7034123/93‑2 (MQ=255)

                                    cGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTa                                                     >  2:1471583/1‑93 (MQ=255)

                                     gATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTaa                                                    >  2:6916439/1‑93 (MQ=255)

                                      aTTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAg                                                   >  1:6328127/1‑93 (MQ=255)

                                      aTTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAg                                                   >  2:3445177/1‑93 (MQ=255)

                                       ttGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGc                                                  <  1:3678957/93‑1 (MQ=255)

                                       ttGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGc                                                  >  2:529000/1‑93 (MQ=255)

                                       ttGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGc                                                  >  2:4350078/1‑93 (MQ=255)

                                        tGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCa                                                 <  2:4482344/93‑1 (MQ=255)

                                        tGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCa                                                 <  1:2104518/93‑1 (MQ=255)

                                         gCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCAt                                                <  2:6158401/93‑1 (MQ=255)

                                         gCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCAt                                                >  1:5214841/1‑93 (MQ=255)

                                            aCGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGgc                                             <  1:6503071/93‑1 (MQ=255)

                                              gcgTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGgcgc                                           >  2:6475297/1‑93 (MQ=255)

                                              gcgTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGgcgc                                           >  2:3737242/1‑93 (MQ=255)

                                               cgTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCt                                          <  1:1104117/93‑1 (MQ=255)

                                                 tAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCa                                        <  1:3237800/93‑1 (MQ=255)

                                                 tAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCa                                        >  1:6405423/1‑93 (MQ=255)

                                                   aaaCTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAAt                                      <  2:7929264/93‑1 (MQ=255)

                                                   aaaCTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAAt                                      <  1:3814977/93‑1 (MQ=255)

                                                      cTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTa                                   <  1:6210739/93‑1 (MQ=255)

                                                         aCATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAAcc                                <  2:5714647/93‑1 (MQ=255)

                                                         aCATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAAcc                                >  2:2223725/1‑93 (MQ=255)

                                                         aCATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAAcc                                <  1:6047270/93‑1 (MQ=255)

                                                          cATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCt                               <  2:1269291/93‑1 (MQ=255)

                                                          cATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCt                               >  2:6369611/1‑93 (MQ=255)

                                                            tCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTg                             <  1:1807540/93‑1 (MQ=255)

                                                              gcgcATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGaa                           <  1:146361/93‑1 (MQ=255)

                                                               cgcATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAAc                          <  1:6799250/93‑1 (MQ=255)

                                                                gcATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAAcc                         >  1:4142285/1‑93 (MQ=255)

                                                                gcATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAAcc                         >  1:5501383/1‑93 (MQ=255)

                                                                 cATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAAccc                        <  1:1952094/93‑1 (MQ=255)

                                                                  atatCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCa                       >  2:5639106/1‑93 (MQ=255)

                                                                   tatCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCaa                      >  2:7680200/1‑93 (MQ=255)

                                                                   tatCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCaa                      <  1:2689628/93‑1 (MQ=255)

                                                                   tatCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCaa                      >  1:2848696/1‑93 (MQ=255)

                                                                   tatCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCaa                      >  1:3138817/1‑93 (MQ=255)

                                                                    ttCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAAc                     <  1:7009177/92‑1 (MQ=255)

                                                                    atCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAAc                     >  1:2352490/1‑93 (MQ=255)

                                                                     tCGACTAAATTCGCCACAGACCGCTCCATAATTCGCCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACa                    <  1:2527829/93‑1 (MQ=255)

                                                                         cTAAATTCGCCACAGACCGCTCCATAATCCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATAtt                <  2:4569606/93‑1 (MQ=255)

                                                                          tAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATAttt               >  1:6276097/1‑93 (MQ=255)

                                                                          tAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATAttt               >  1:3946795/1‑93 (MQ=255)

                                                                          tAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATAttt               <  2:7356363/93‑1 (MQ=255)

                                                                           aaaTTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTa              >  2:34949/1‑93 (MQ=255)

                                                                           aaaTTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTa              <  2:2567018/93‑1 (MQ=255)

                                                                           aaaTTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTa              <  1:5408290/93‑1 (MQ=255)

                                                                                cGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGaa         <  2:1981882/93‑1 (MQ=255)

                                                                                  ccACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAata       <  1:4281476/93‑1 (MQ=255)

                                                                                  ccACAGAACGCTCCATAATTCACCCTTCGTCTTGCGTTCATTTTCTAAGCATGGCGCTCAATTTAACCTCAAACCCAACATATTTACAGAata       <  1:6916439/93‑1 (MQ=255)

                                                                                     caGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTa    <  1:1244868/93‑1 (MQ=255)

                                                                                     caGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTa    >  1:3919781/1‑93 (MQ=255)

                                                                                     caGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTa    <  2:6688489/93‑1 (MQ=255)

                                                                                     caGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTa    <  1:2255113/93‑1 (MQ=255)

                                                                                     caGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTa    >  1:7186588/1‑93 (MQ=255)

                                                                                      aGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAc   >  1:5741305/1‑93 (MQ=255)

                                                                                      aGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAc   <  1:7245032/93‑1 (MQ=255)

                                                                                      aGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAc   <  1:7670008/93‑1 (MQ=255)

                                                                                       gACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAcc  <  2:5468755/93‑1 (MQ=255)

                                                                                       gACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAcc  <  2:1061880/93‑1 (MQ=255)

                                                                                       gACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAcc  <  2:7471236/93‑1 (MQ=255)

                                                                                       gACCGCTCCATAATTCACCCTTCGTCATGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAcc  >  1:1065424/1‑93 (MQ=255)

CGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACTGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACC  >  NC_000913/3337609‑3337788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 221 total aligned reads displayed.

CCTCGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACTGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGCC  >  NC_000913/3337606‑3337792

CCTCGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACC                                                                                               >  SRR4302543.2802497/1‑94 (MQ=60)

CCTCGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACC                                                                                               <  SRR4302543.5610779/94‑1 (MQ=60)

CCTCGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACC                                                                                               <  SRR4302543.6183077/94‑1 (MQ=60)

CCTCGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACC                                                                                               >  SRR4302543.3660042/1‑94 (MQ=60)

CCTCGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGAAATCGAGCATATCGACTAAATTCGCCACAGACC                                                                                               >  SRR4302543.2802498/1‑94 (MQ=60)

 CTCGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCG                                                                                              <  SRR4302543.7719516/94‑1 (MQ=60)

   CGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCGCGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCT                                                                                            <  SRR4302543.7929950/94‑1 (MQ=60)

   CGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCT                                                                                            <  SRR4302543.4212515/94‑1 (MQ=60)

   CGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCT                                                                                            <  SRR4302543.7355182/94‑1 (MQ=60)

    GCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTC                                                                                           >  SRR4302543.3749961/1‑94 (MQ=60)

    GCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACACAGCGCATATCGACTAAATTCACCCCAGACCGCTC                                                                                           >  SRR4302543.829207/1‑94 (MQ=60)

      GGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCA                                                                                         >  SRR4302543.1720493/1‑94 (MQ=60)

      GGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCA                                                                                         >  SRR4302543.2090820/1‑94 (MQ=60)

      GGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCAACTAAATTCGCCACAGACCGCTCCA                                                                                         <  SRR4302543.2804799/94‑1 (MQ=60)

       GCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCAT                                                                                        <  SRR4302543.2949993/94‑1 (MQ=60)

         ACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAA                                                                                      >  SRR4302543.638853/1‑94 (MQ=60)

           GGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATT                                                                                    >  SRR4302543.5059510/1‑94 (MQ=60)

           GGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATT                                                                                    >  SRR4302543.5059509/1‑94 (MQ=60)

           GGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATT                                                                                    <  SRR4302543.4803175/94‑1 (MQ=60)

           GGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATT                                                                                    >  SRR4302543.6697139/1‑94 (MQ=60)

            GTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTC                                                                                   <  SRR4302543.7439419/94‑1 (MQ=60)

            GTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTC                                                                                   >  SRR4302543.453580/1‑94 (MQ=60)

             TCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCA                                                                                  <  SRR4302543.4391290/94‑1 (MQ=60)

             TCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCA                                                                                  <  SRR4302543.3429322/94‑1 (MQ=60)

              CAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCAC                                                                                 >  SRR4302543.5645260/1‑94 (MQ=60)

              CAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCAC                                                                                 >  SRR4302543.3809342/1‑94 (MQ=60)

              CAGGAAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACTGCTCCATAATTCAC                                                                                 <  SRR4302543.7446678/94‑1 (MQ=60)

               AGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACC                                                                                >  SRR4302543.325977/1‑94 (MQ=60)

               AGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACC                                                                                >  SRR4302543.6224233/1‑94 (MQ=60)

               AGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACC                                                                                <  SRR4302543.6595170/94‑1 (MQ=60)

                GGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCC                                                                               <  SRR4302543.1653438/94‑1 (MQ=60)

                GGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCC                                                                               <  SRR4302543.6136302/94‑1 (MQ=60)

                 GGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCT                                                                              >  SRR4302543.2154602/1‑94 (MQ=60)

                 GGAAATATTATCGAAGATGCAGCGATTGCCACGCGGAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCT                                                                              <  SRR4302543.6442903/94‑1 (MQ=60)

                  GAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCAT                                                                             >  SRR4302543.6203195/1‑94 (MQ=60)

                   AAATATTATCGAAGATGCAGGGATTGCCACGCGGAAAAATGACATCGCGCATATCGCCTAAATTCGCCACAGACCGCCCCATAATTGACGCTTC                                                                            >  SRR4302543.1127134/1‑94 (MQ=60)

                   AAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTC                                                                            <  SRR4302543.239666/94‑1 (MQ=60)

                   AAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTC                                                                            >  SRR4302543.6646786/1‑94 (MQ=60)

                    AATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCG                                                                           <  SRR4302543.5733060/94‑1 (MQ=60)

                     ATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGT                                                                          >  SRR4302543.7269878/1‑94 (MQ=60)

                      TATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTC                                                                         >  SRR4302543.6648782/1‑94 (MQ=60)

                       ATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCT                                                                        >  SRR4302543.2852862/1‑94 (MQ=60)

                       ATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCT                                                                        >  SRR4302543.2379691/1‑94 (MQ=60)

                        TTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTT                                                                       >  SRR4302543.1966747/1‑94 (MQ=60)

                        TTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTT                                                                       <  SRR4302543.4980987/94‑1 (MQ=60)

                         TATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTG                                                                      <  SRR4302543.1640365/94‑1 (MQ=60)

                            CGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGT                                                                   >  SRR4302543.4335087/1‑94 (MQ=60)

                            CGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGT                                                                   >  SRR4302543.7555636/1‑94 (MQ=60)

                             GAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTT                                                                  >  SRR4302543.991958/1‑94 (MQ=60)

                             GAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTT                                                                  <  SRR4302543.2610663/94‑1 (MQ=60)

                             GAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTT                                                                  >  SRR4302543.5974488/1‑94 (MQ=60)

                              AAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTG                                                                 >  SRR4302543.5072205/1‑94 (MQ=60)

                              AAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTG                                                                 <  SRR4302543.7160491/94‑1 (MQ=60)

                               AGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGA                                                                <  SRR4302543.4563790/94‑1 (MQ=60)

                               AGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGA                                                                >  SRR4302543.807206/1‑94 (MQ=60)

                                GATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGAT                                                               >  SRR4302543.2093914/1‑94 (MQ=60)

                                GATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGAT                                                               >  SRR4302543.2494310/1‑94 (MQ=60)

                                  TGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTT                                                             >  SRR4302543.1328230/1‑94 (MQ=60)

                                  TGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTT                                                             <  SRR4302543.6468922/94‑1 (MQ=60)

                                   GCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTT                                                            <  SRR4302543.6432515/94‑1 (MQ=60)

                                   GCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTT                                                            <  SRR4302543.4824487/94‑1 (MQ=60)

                                   GCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTT                                                            >  SRR4302543.7547796/1‑94 (MQ=60)

                                    CAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTC                                                           >  SRR4302543.5900684/1‑94 (MQ=60)

                                     AGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCT                                                          >  SRR4302543.2769671/1‑94 (MQ=60)

                                     AGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCT                                                          >  SRR4302543.4251064/1‑94 (MQ=60)

                                     AGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCT                                                          <  SRR4302543.1351930/94‑1 (MQ=60)

                                      GCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTTTA                                                         >  SRR4302543.1096334/1‑94 (MQ=60)

                                      GCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTA                                                         >  SRR4302543.1096335/1‑94 (MQ=60)

                                       CGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAA                                                        >  SRR4302543.7994150/1‑94 (MQ=60)

                                       CGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAA                                                        >  SRR4302543.6772727/1‑94 (MQ=60)

                                        GATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAG                                                       >  SRR4302543.6387644/1‑94 (MQ=60)

                                         ATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGC                                                      >  SRR4302543.4983080/1‑94 (MQ=60)

                                         ATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGC                                                      >  SRR4302543.130831/1‑94 (MQ=60)

                                          acacaaaaaaaaatgccacacctaaataacaaataaacttcccCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCA                                                     <  SRR4302543.7924264/51‑1 (MQ=60)

                                          TTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCA                                                     <  SRR4302543.3711273/94‑1 (MQ=60)

                                           TGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATACTTCACCCTTCGTCTTGCGTTGATTTTTTAAGCAT                                                    >  SRR4302543.5261821/1‑94 (MQ=60)

                                           TGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCAT                                                    >  SRR4302543.5261820/1‑94 (MQ=60)

                                           TGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCAT                                                    <  SRR4302543.370331/94‑1 (MQ=60)

                                           TGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCAT                                                    <  SRR4302543.1815979/94‑1 (MQ=60)

                                           TGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCAT                                                    <  SRR4302543.7055261/94‑1 (MQ=60)

                                           TGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCAT                                                    <  SRR4302543.2123348/94‑1 (MQ=60)

                                           TGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCAT                                                    <  SRR4302543.2788287/94‑1 (MQ=60)

                                            TCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATG                                                   <  SRR4302543.3961607/94‑1 (MQ=60)

                                             CCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGG                                                  <  SRR4302543.5335898/94‑1 (MQ=60)

                                             CCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGG                                                  <  SRR4302543.7382685/94‑1 (MQ=60)

                                             CCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGG                                                  >  SRR4302543.3221372/1‑94 (MQ=60)

                                              CACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGC                                                 >  SRR4302543.5502496/1‑94 (MQ=60)

                                              CACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGC                                                 <  SRR4302543.4724677/94‑1 (MQ=60)

                                              CACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGC                                                 <  SRR4302543.600128/94‑1 (MQ=60)

                                              CACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGC                                                 <  SRR4302543.4724678/94‑1 (MQ=60)

                                              CACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGC                                                 >  SRR4302543.1350014/1‑94 (MQ=60)

                                               ACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCG                                                <  SRR4302543.4991876/94‑1 (MQ=60)

                                               ACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCG                                                >  SRR4302543.5569545/1‑94 (MQ=60)

                                                CGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGC                                               >  SRR4302543.1549714/1‑94 (MQ=60)

                                                CGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGC                                               <  SRR4302543.627216/94‑1 (MQ=60)

                                                  CGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTC                                             >  SRR4302543.6258204/1‑94 (MQ=60)

                                                  CGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTC                                             <  SRR4302543.1114072/94‑1 (MQ=60)

                                                  CGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTC                                             >  SRR4302543.2582878/1‑94 (MQ=60)

                                                   GTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCA                                            >  SRR4302543.28326/1‑94 (MQ=60)

                                                   GTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCA                                            >  SRR4302543.6465747/1‑94 (MQ=60)

                                                    TAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAA                                           <  SRR4302543.7808120/94‑1 (MQ=60)

                                                    TAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAA                                           <  SRR4302543.3267088/94‑1 (MQ=60)

                                                     AAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAAT                                          <  SRR4302543.2297090/94‑1 (MQ=60)

                                                      AAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATT                                         >  SRR4302543.5871490/1‑94 (MQ=60)

                                                      AAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATT                                         <  SRR4302543.7544254/94‑1 (MQ=60)

                                                      AAACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATT                                         <  SRR4302543.3848609/94‑1 (MQ=60)

                                                       AACTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTT                                        >  SRR4302543.6018379/1‑94 (MQ=60)

                                                         CTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAA                                      <  SRR4302543.6269380/94‑1 (MQ=60)

                                                         CTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAA                                      <  SRR4302543.7105126/94‑1 (MQ=60)

                                                         CTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAA                                      >  SRR4302543.5545967/1‑94 (MQ=60)

                                                         CTGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAA                                      >  SRR4302543.7797151/1‑94 (MQ=60)

                                                          TGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAAC                                     >  SRR4302543.2082302/1‑94 (MQ=60)

                                                          TGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAAC                                     >  SRR4302543.803801/1‑94 (MQ=60)

                                                          CGACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAAC                                     <  SRR4302543.4053493/94‑1 (MQ=60)

                                                           GACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACC                                    <  SRR4302543.6376562/94‑1 (MQ=60)

                                                            ACATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCT                                   <  SRR4302543.6104510/94‑1 (MQ=60)

                                                             CATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTT                                  <  SRR4302543.3310130/94‑1 (MQ=60)

                                                              ATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTG                                 <  SRR4302543.3951681/94‑1 (MQ=60)

                                                              ATCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTG                                 >  SRR4302543.3755516/1‑94 (MQ=60)

                                                               TCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGA                                <  SRR4302543.1823720/94‑1 (MQ=60)

                                                               TCGCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGA                                >  SRR4302543.6184107/1‑94 (MQ=60)

                                                                 GCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAAC                              <  SRR4302543.147633/94‑1 (MQ=60)

                                                                 GCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAAC                              <  SRR4302543.7186651/94‑1 (MQ=60)

                                                                 GCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAAC                              <  SRR4302543.7186650/94‑1 (MQ=60)

                                                                 CCGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAAC                              <  SRR4302543.6555538/94‑1 (MQ=60)

                                                                  CGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACC                             <  SRR4302543.6863460/94‑1 (MQ=60)

                                                                  CGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACC                             >  SRR4302543.4179696/1‑94 (MQ=60)

                                                                  CGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACC                             >  SRR4302543.5551309/1‑94 (MQ=60)

                                                                  CGCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACC                             >  SRR4302543.3558009/1‑94 (MQ=60)

                                                                   GCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCC                            <  SRR4302543.7957084/94‑1 (MQ=60)

                                                                   GCATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCC                            <  SRR4302543.5529427/94‑1 (MQ=60)

                                                                    CATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCA                           >  SRR4302543.3893886/1‑94 (MQ=60)

                                                                    CATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCA                           >  SRR4302543.4154960/1‑94 (MQ=60)

                                                                    CATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCA                           <  SRR4302543.1969601/94‑1 (MQ=60)

                                                                    CATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACACA                           >  SRR4302543.2843786/1‑94 (MQ=60)

                                                                     ATATCGACTAAATTCGCCACAGACCGCTCCGTAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAA                          >  SRR4302543.4888721/1‑94 (MQ=60)

                                                                     ATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAA                          >  SRR4302543.6387391/1‑94 (MQ=60)

                                                                     ATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAA                          <  SRR4302543.6327312/94‑1 (MQ=60)

                                                                     ATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAA                          >  SRR4302543.2874703/1‑94 (MQ=60)

                                                                     ATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAA                          >  SRR4302543.4538554/1‑94 (MQ=60)

                                                                     ATATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAA                          >  SRR4302543.3167048/1‑94 (MQ=60)

                                                                      TATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAAC                         >  SRR4302543.2373828/1‑94 (MQ=60)

                                                                      TATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAAC                         <  SRR4302543.2141840/94‑1 (MQ=60)

                                                                       TTCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACA                        <  SRR4302543.7075943/94‑1 (MQ=60)

                                                                       ATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACA                        <  SRR4302543.6204467/94‑1 (MQ=60)

                                                                       ATCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACA                        <  SRR4302543.1125118/94‑1 (MQ=60)

                                                                        TCGACTAAATTCGCCACAGACCGCTCCATAATTCGCCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACAT                       <  SRR4302543.2550824/94‑1 (MQ=60)

                                                                        TCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACAT                       <  SRR4302543.1456790/94‑1 (MQ=60)

                                                                        TCGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACAT                       <  SRR4302543.1895923/94‑1 (MQ=60)

                                                                         CGACTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATA                      >  SRR4302543.7258820/1‑94 (MQ=60)

                                                                            CTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGTATGGCGCTCAATTTAACATTGAACCCAACATATTT                   >  SRR4302543.6880415/1‑94 (MQ=60)

                                                                            CTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTT                   >  SRR4302543.3283044/1‑94 (MQ=60)

                                                                            CTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTT                   >  SRR4302543.3981683/1‑94 (MQ=60)

                                                                            CTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTT                   >  SRR4302543.3981685/1‑94 (MQ=60)

                                                                            CTAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTT                   >  SRR4302543.6335265/1‑94 (MQ=60)

                                                                             TAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTA                  >  SRR4302543.770120/1‑94 (MQ=60)

                                                                             TAAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTA                  <  SRR4302543.1165665/94‑1 (MQ=60)

                                                                              AAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTAC                 >  SRR4302543.6902446/1‑94 (MQ=60)

                                                                              AAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTAC                 <  SRR4302543.5457462/94‑1 (MQ=60)

                                                                              AAATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTAC                 <  SRR4302543.2331229/94‑1 (MQ=60)

                                                                               AATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACA                <  SRR4302543.258315/94‑1 (MQ=60)

                                                                               AATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACA                <  SRR4302543.7286651/94‑1 (MQ=60)

                                                                                ATTCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAG               <  SRR4302543.7015508/94‑1 (MQ=60)

                                                                                  TCGCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAA             <  SRR4302543.834824/94‑1 (MQ=60)

                                                                                    GCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATA           <  SRR4302543.3225772/94‑1 (MQ=60)

                                                                                    GCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATA           <  SRR4302543.4680058/94‑1 (MQ=60)

                                                                                    GCCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATA           >  SRR4302543.3156406/1‑94 (MQ=60)

                                                                                     CCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATAT          <  SRR4302543.4320388/94‑1 (MQ=60)

                                                                                     CCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATAT          >  SRR4302543.1791646/1‑94 (MQ=60)

                                                                                     CCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATAT          <  SRR4302543.6981458/94‑1 (MQ=60)

                                                                                     CCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATAT          <  SRR4302543.4110622/94‑1 (MQ=60)

                                                                                     CCACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATAT          <  SRR4302543.650813/94‑1 (MQ=60)

                                                                                     CCACAGAACGCTCCATAATTCACCCTTCGTCTTGCGTTCATTTTCTAAGCATGGCGCTCAATTTAACCTCAAACCCAACATATTTACAGAATAT          <  SRR4302543.6981457/94‑1 (MQ=60)

                                                                                       ACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTA        >  SRR4302543.7256308/1‑94 (MQ=60)

                                                                                       ACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTA        <  SRR4302543.4408372/94‑1 (MQ=60)

                                                                                       ACAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTA        >  SRR4302543.3954372/1‑94 (MQ=60)

                                                                                        CAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAC       <  SRR4302543.710217/94‑1 (MQ=60)

                                                                                        CAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAC       >  SRR4302543.6763562/1‑94 (MQ=60)

                                                                                        CAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAC       <  SRR4302543.2275629/94‑1 (MQ=60)

                                                                                        CAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAC       <  SRR4302543.1256042/94‑1 (MQ=60)

                                                                                        CAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAC       >  SRR4302543.5260382/1‑94 (MQ=60)

                                                                                        CAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAC       <  SRR4302543.5794486/94‑1 (MQ=60)

                                                                                        CAGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTAC       >  SRR4302543.5793650/1‑94 (MQ=60)

                                                                                         AGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACC      <  SRR4302543.7742689/94‑1 (MQ=60)

                                                                                         AGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACC      >  SRR4302543.7631373/1‑94 (MQ=60)

                                                                                         AGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACC      >  SRR4302543.1358225/1‑94 (MQ=60)

                                                                                         AGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACC      >  SRR4302543.1358226/1‑94 (MQ=60)

                                                                                         AGACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACC      <  SRR4302543.7315130/94‑1 (MQ=60)

                                                                                         AGACCGCTCCATAATTCACCCTTCGTCATGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACC      >  SRR4302543.1075000/1‑94 (MQ=60)

                                                                                           ACCGCTCCATAATTCCCCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCG    <  SRR4302543.149159/94‑1 (MQ=60)

                                                                                           ACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCG    <  SRR4302543.4597993/94‑1 (MQ=60)

                                                                                           ACCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCC    >  SRR4302543.4445795/1‑94 (MQ=60)

                                                                                            CCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGC   <  SRR4302543.7580437/94‑1 (MQ=60)

                                                                                            CCGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGC   <  SRR4302543.3151343/94‑1 (MQ=60)

                                                                                             CGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGCC  <  SRR4302543.4728893/94‑1 (MQ=60)

                                                                                             CGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGCC  >  SRR4302543.101411/1‑94 (MQ=60)

                                                                                             CGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGCC  >  SRR4302543.1097292/1‑94 (MQ=60)

                                                                                             CGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGCC  >  SRR4302543.1097291/1‑94 (MQ=60)

                                                                                             CGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGCC  <  SRR4302543.4360932/94‑1 (MQ=60)

                                                                                             CGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGCC  <  SRR4302543.187329/94‑1 (MQ=60)

CCTCGCGGCACGGTCAGGGAAATATTATCGAAGATGCAGCGATTGCCACGCGTAAAACTGACATCGCGCATATCGACTAAATTCGCCACAGACTGCTCCATAATTCACCCTTCGTCTTGCGTTGATTTTCTAAGCATGGCGCTCAATTTAACCTTGAACCCAACATATTTACAGAATATTACCCGCC  >  NC_000913/3337606‑3337792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`