Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,362,693 |
T→C |
L751P (CTC→CCC) |
yhcD → |
putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,362,693 | 0 | T | C | 99.6%
| 812.5
/ ‑4.7
| 251 | L751P (CTC→CCC) | yhcD | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (115/135); minor base A (0/1); total (115/136) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.29e-01 |
Only 100 of 253 total aligned reads displayed.
CCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAA > NC_000913/3362603‑3362782
|
ccGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCa < 1:4478198/93‑1 (MQ=255)
cGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCaa < 1:879126/93‑1 (MQ=255)
cGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCaa < 1:2186235/93‑1 (MQ=255)
gCAAAAAACTGCCCAGAGGCGGTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACa > 1:3200157/1‑93 (MQ=255)
aaaaaCTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCa > 2:783385/1‑93 (MQ=255)
aaaaaCTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCa > 2:2747501/1‑93 (MQ=255)
aaaaaCTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCa > 1:1940379/1‑93 (MQ=255)
aaCTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAc < 2:1217710/93‑1 (MQ=255)
aaCTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAc > 2:2303914/1‑93 (MQ=255)
aaCTGCCCAAAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAc < 2:3579902/93‑1 (MQ=255)
aCTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAcc < 2:3133343/93‑1 (MQ=255)
tGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCgg > 2:294801/1‑93 (MQ=255)
tGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCgg < 1:1278399/93‑1 (MQ=255)
gCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGa < 1:838159/93‑1 (MQ=255)
gCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGa > 2:1956468/1‑93 (MQ=255)
ccAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAATCGGACa < 2:3901356/93‑1 (MQ=255)
ccAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACa > 2:1823616/1‑93 (MQ=255)
cAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAt > 2:4414999/1‑93 (MQ=255)
agagGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATg < 1:3537524/93‑1 (MQ=255)
gagGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATgg < 2:4639837/93‑1 (MQ=255)
gagGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATgg > 2:1583087/1‑93 (MQ=255)
agGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGt < 2:1300932/93‑1 (MQ=255)
agGCGTTGCGATTGAAGATAGTGAAGCCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAGCCGGACATGGt < 2:1266309/93‑1 (MQ=255)
ggCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTg < 1:3578259/93‑1 (MQ=255)
gCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGc < 2:4420139/93‑1 (MQ=255)
gCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGc < 1:3173058/93‑1 (MQ=255)
gCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGc > 2:606563/1‑93 (MQ=255)
gTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTa > 1:390408/1‑93 (MQ=255)
gTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTa > 1:2911971/1‑93 (MQ=255)
gTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTa > 1:1224124/1‑93 (MQ=255)
ttGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAg > 1:3101638/1‑93 (MQ=255)
ttGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAg > 2:4298884/1‑93 (MQ=255)
ttGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAg > 2:1024833/1‑93 (MQ=255)
ttGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAg > 2:3371166/1‑93 (MQ=255)
tGCGATTGAAGATAGTGAAGACAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGa < 2:4223182/93‑1 (MQ=255)
cGATTGAAGATAGTGAAGGCAGCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGata < 2:1463199/93‑1 (MQ=255)
gATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGTTGCTAGatat > 1:2965093/1‑93 (MQ=255)
gATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGatat > 1:3060334/1‑93 (MQ=255)
aTTGAAGATAGTGAAGGCAACTATCTGACACCATCAGTGGATGACGGGGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGAtata > 2:396598/1‑93 (MQ=255)
aTTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGAtata > 2:1635090/1‑93 (MQ=255)
ttGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATaa > 2:4090951/1‑93 (MQ=255)
tGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATaaa > 2:1412290/1‑93 (MQ=255)
tGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATaaa < 1:3002422/93‑1 (MQ=255)
aGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGa < 1:2303157/93‑1 (MQ=255)
aGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGa < 1:2051501/93‑1 (MQ=255)
aGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAACAACATCAAACCGGACATGGTGCTAGATATAAAAGa > 1:2898963/1‑93 (MQ=255)
gATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGAt < 2:732964/93‑1 (MQ=255)
aTAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATg < 2:1939069/93‑1 (MQ=255)
tAGTGAAGTCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATCCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGa < 2:558318/93‑1 (MQ=255)
tAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGa < 1:4547690/93‑1 (MQ=255)
tAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGa > 2:3785895/1‑93 (MQ=255)
aGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGag > 2:247037/1‑93 (MQ=255)
aGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGag > 2:2689491/1‑93 (MQ=255)
gTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGagc > 1:2919517/1‑93 (MQ=255)
aGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAgcagca > 2:3670973/1‑93 (MQ=255)
aGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAgcagca > 2:4330404/1‑93 (MQ=255)
ggCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCaa < 1:1119454/93‑1 (MQ=255)
cAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATc < 1:975185/93‑1 (MQ=255)
cAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATc < 1:1495958/93‑1 (MQ=255)
cAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATc < 1:4524255/93‑1 (MQ=255)
aaCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCa > 1:2540898/1‑93 (MQ=255)
aaCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCa < 2:2553276/93‑1 (MQ=255)
aaCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCa > 1:3767913/1‑93 (MQ=255)
aaCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCa < 2:2825672/93‑1 (MQ=255)
aCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAt > 2:1153623/1‑93 (MQ=255)
aCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAt < 2:199118/93‑1 (MQ=255)
aCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAt < 2:2290081/93‑1 (MQ=255)
aCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAt < 2:3100589/93‑1 (MQ=255)
aTCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGcc < 2:2048181/93‑1 (MQ=255)
aTCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGcc < 1:2843616/93‑1 (MQ=255)
tCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCg > 1:34100/1‑93 (MQ=255)
tacaacaTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAt < 1:1539585/92‑1 (MQ=255)
acaacaTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAtt < 1:3927732/93‑1 (MQ=255)
acaacaTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAtt < 2:2199291/93‑1 (MQ=255)
aacaTCAGTGGATGACGGTGTTGTATTCCCAAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCa < 1:183589/93‑1 (MQ=255)
caTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCAcc < 2:2436391/93‑1 (MQ=255)
aTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCt > 1:3510861/1‑93 (MQ=255)
cAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTa < 2:3381101/93‑1 (MQ=255)
aGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTAc < 1:4155057/93‑1 (MQ=255)
gTGGATGACGGTGTTGTATTCCCCAATAACATCAAACGGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACa < 1:1627553/93‑1 (MQ=255)
tGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACAt < 2:2922919/93‑1 (MQ=255)
aTGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTcc > 2:3447239/1‑93 (MQ=255)
tGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTccc > 1:2718612/1‑93 (MQ=255)
gACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCa > 1:780664/1‑93 (MQ=255)
gACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCa < 1:1589801/93‑1 (MQ=255)
gACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCa < 1:1898820/93‑1 (MQ=255)
aCGTTGTTGTATTCCCCAATAACATCAAACCGGACATTGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCag < 1:653759/93‑1 (MQ=255)
ggTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaa < 2:3875892/93‑1 (MQ=255)
gtgtTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaag > 2:868789/1‑93 (MQ=255)
gtgtTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaag > 2:3284248/1‑93 (MQ=255)
gtgtTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaag > 2:4038532/1‑93 (MQ=255)
tgttgtATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaaga < 1:1040222/93‑1 (MQ=255)
tgtATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGc > 1:1699720/1‑93 (MQ=255)
tATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCAc < 1:2446682/93‑1 (MQ=255)
tATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCAc < 1:708953/93‑1 (MQ=255)
tATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCAc > 1:4158049/1‑93 (MQ=255)
ttCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCa > 2:3253656/1‑93 (MQ=255)
ttCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCa > 1:441302/1‑93 (MQ=255)
tCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCaa > 2:1795366/1‑93 (MQ=255)
tCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCaa > 1:1584533/1‑93 (MQ=255)
|
CCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAA > NC_000913/3362603‑3362782
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGA > NC_000913/3362601‑3362786
|
TTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCC > SRR4302535.113823/1‑94 (MQ=60)
TTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCC < SRR4302535.1157285/94‑1 (MQ=60)
CCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAA < SRR4302535.4508944/94‑1 (MQ=60)
CCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAA < SRR4302535.2981840/94‑1 (MQ=60)
CGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAAT < SRR4302535.885352/94‑1 (MQ=60)
CGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAAT < SRR4302535.2201813/94‑1 (MQ=60)
GACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATA > SRR4302535.3740071/1‑94 (MQ=60)
ACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAA < SRR4302535.2745635/94‑1 (MQ=60)
GGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACA < SRR4302535.3614949/94‑1 (MQ=60)
GGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACA > SRR4302535.1225139/1‑94 (MQ=60)
GGCAAAAAACTGCCCAGAGGCGGTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACA > SRR4302535.3222314/1‑94 (MQ=60)
GCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACAT > SRR4302535.2978994/1‑94 (MQ=60)
AAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCA > SRR4302535.1954358/1‑94 (MQ=60)
AAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCA < SRR4302535.2406998/94‑1 (MQ=60)
AAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCA < SRR4302535.1521303/94‑1 (MQ=60)
AAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAA < SRR4302535.4186133/94‑1 (MQ=60)
AAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAC < SRR4302535.1373150/94‑1 (MQ=60)
AAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAC > SRR4302535.2925946/1‑94 (MQ=60)
AACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACC < SRR4302535.1585657/94‑1 (MQ=60)
ACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCG < SRR4302535.2141625/94‑1 (MQ=60)
CTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGG < SRR4302535.4553872/94‑1 (MQ=60)
TGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGA < SRR4302535.1287529/94‑1 (MQ=60)
GCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGAC < SRR4302535.844044/94‑1 (MQ=60)
CCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACA < SRR4302535.353825/94‑1 (MQ=60)
CCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAT < SRR4302535.3337055/94‑1 (MQ=60)
AGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGG > SRR4302535.4032964/1‑94 (MQ=60)
AGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGG < SRR4302535.3562082/94‑1 (MQ=60)
GAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGT < SRR4302535.1649161/94‑1 (MQ=60)
AGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTG > SRR4302535.1805162/1‑94 (MQ=60)
GGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGC < SRR4302535.3603066/94‑1 (MQ=60)
GCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCT < SRR4302535.3195023/94‑1 (MQ=60)
CGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTA > SRR4302535.349764/1‑94 (MQ=60)
CGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTA < SRR4302535.1897846/94‑1 (MQ=60)
CGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTA > SRR4302535.2932541/1‑94 (MQ=60)
CGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTA > SRR4302535.393127/1‑94 (MQ=60)
CGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTA > SRR4302535.1232880/1‑94 (MQ=60)
GTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAG > SRR4302535.1598618/1‑94 (MQ=60)
GTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAG > SRR4302535.244246/1‑94 (MQ=60)
GTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAG > SRR4302535.3123229/1‑94 (MQ=60)
TTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGA < SRR4302535.2898931/94‑1 (MQ=60)
TACGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGAT < SRR4302535.4058522/94‑1 (MQ=60)
CGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGTTGCTAGATAT > SRR4302535.2985899/1‑94 (MQ=60)
CGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATAT < SRR4302535.4564544/94‑1 (MQ=60)
CGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATAT > SRR4302535.3081739/1‑94 (MQ=60)
CGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATAT < SRR4302535.3095287/94‑1 (MQ=60)
GATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATA > SRR4302535.2937994/1‑94 (MQ=60)
ATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAA < SRR4302535.961326/94‑1 (MQ=60)
ATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCACAATAACATCAAACCGGACATGGTGCTAGATATAA < SRR4302535.3146435/94‑1 (MQ=60)
TTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAA < SRR4302535.841633/94‑1 (MQ=60)
GTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGCATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAA < SRR4302535.3210204/94‑1 (MQ=60)
TGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAA < SRR4302535.3023469/94‑1 (MQ=60)
TGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAA < SRR4302535.1616049/94‑1 (MQ=60)
TGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAA > SRR4302535.4503802/1‑94 (MQ=60)
GAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAG > SRR4302535.3827442/1‑94 (MQ=60)
AAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGA > SRR4302535.2923470/1‑94 (MQ=60)
AAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGA < SRR4302535.1807453/94‑1 (MQ=60)
AAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAACAACATCAAACCGGACATGGTGCTAGATATAAAAGA > SRR4302535.2919461/1‑94 (MQ=60)
AGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGAT < SRR4302535.2066273/94‑1 (MQ=60)
AGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGAT > SRR4302535.2105641/1‑94 (MQ=60)
AGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGAT < SRR4302535.2319635/94‑1 (MQ=60)
GATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATG > SRR4302535.4548630/1‑94 (MQ=60)
TAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAG > SRR4302535.1950697/1‑94 (MQ=60)
TAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAG < SRR4302535.4578783/94‑1 (MQ=60)
AGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGC > SRR4302535.2940117/1‑94 (MQ=60)
GTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCA < SRR4302535.4328615/94‑1 (MQ=60)
AAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCA < SRR4302535.2566418/94‑1 (MQ=60)
GGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAAT > SRR4302535.691589/1‑94 (MQ=60)
GGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAAT < SRR4302535.1386190/94‑1 (MQ=60)
GGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAAT < SRR4302535.1127439/94‑1 (MQ=60)
CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCA < SRR4302535.4661708/94‑1 (MQ=60)
CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCA < SRR4302535.4555250/94‑1 (MQ=60)
CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCA > SRR4302535.3793926/1‑94 (MQ=60)
CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCA < SRR4302535.982109/94‑1 (MQ=60)
CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCA < SRR4302535.1506716/94‑1 (MQ=60)
CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCA > SRR4302535.2559200/1‑94 (MQ=60)
CTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGC < SRR4302535.3081106/94‑1 (MQ=60)
CTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGC < SRR4302535.1590557/94‑1 (MQ=60)
ATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCG > SRR4302535.1623700/1‑94 (MQ=60)
ATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCG > SRR4302535.34363/1‑94 (MQ=60)
ATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCG < SRR4302535.2863781/94‑1 (MQ=60)
TGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAT < SRR4302535.2526177/94‑1 (MQ=60)
TGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAT > SRR4302535.3180165/1‑94 (MQ=60)
TACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATT < SRR4302535.1550684/94‑1 (MQ=60)
ACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTC < SRR4302535.3954562/94‑1 (MQ=60)
AACATCAGTGGATGACGGTGTTGTATTCCCAAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCAC < SRR4302535.184853/94‑1 (MQ=60)
ACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACC > SRR4302535.730276/1‑94 (MQ=60)
CATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCT > SRR4302535.3535257/1‑94 (MQ=60)
CATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCT > SRR4302535.883520/1‑94 (MQ=60)
ATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTT < SRR4302535.3587781/94‑1 (MQ=60)
TCAGTGGATGACGGTTTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTA < SRR4302535.2016866/94‑1 (MQ=60)
TCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTA > SRR4302535.3348501/1‑94 (MQ=60)
AGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACA < SRR4302535.4183503/94‑1 (MQ=60)
GTGGATGACGGTGTTGTATTCCCCAATAACATCAAACGGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACAT < SRR4302535.1639302/94‑1 (MQ=60)
GTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACAT < SRR4302535.862155/94‑1 (MQ=60)
GGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTC < SRR4302535.1251112/94‑1 (MQ=60)
GATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCC < SRR4302535.2796870/94‑1 (MQ=60)
GATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCC < SRR4302535.1145604/94‑1 (MQ=60)
ATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCC < SRR4302535.3951665/94‑1 (MQ=60)
ATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCC > SRR4302535.2738028/1‑94 (MQ=60)
TGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCA > SRR4302535.786143/1‑94 (MQ=60)
GACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAG < SRR4302535.1601276/94‑1 (MQ=60)
GACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAG < SRR4302535.1912485/94‑1 (MQ=60)
ACGTTGTTGTATTCCCCAATAACATCAAACCGGACATTGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGA < SRR4302535.658324/94‑1 (MQ=60)
ACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGA < SRR4302535.4394802/94‑1 (MQ=60)
GGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAG < SRR4302535.2497110/94‑1 (MQ=60)
TGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGAT < SRR4302535.1047601/94‑1 (MQ=60)
TGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGAT < SRR4302535.1919556/94‑1 (MQ=60)
TGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGAT < SRR4302535.742669/94‑1 (MQ=60)
TGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGAT < SRR4302535.2230444/94‑1 (MQ=60)
GTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATG > SRR4302535.3845986/1‑94 (MQ=60)
TTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGC > SRR4302535.1712002/1‑94 (MQ=60)
TTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGC < SRR4302535.3019313/94‑1 (MQ=60)
TGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCA > SRR4302535.601240/1‑94 (MQ=60)
TGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCA > SRR4302535.3544169/1‑94 (MQ=60)
GTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCAC > SRR4302535.4186511/1‑94 (MQ=60)
TATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACC < SRR4302535.713930/94‑1 (MQ=60)
TATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACC < SRR4302535.2464304/94‑1 (MQ=60)
ATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCA > SRR4302535.444393/1‑94 (MQ=60)
TTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAA > SRR4302535.1595964/1‑94 (MQ=60)
TTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAA < SRR4302535.3060218/94‑1 (MQ=60)
TCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAA > SRR4302535.138507/1‑94 (MQ=60)
TCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAA < SRR4302535.1075011/94‑1 (MQ=60)
CCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAA > SRR4302535.721617/1‑94 (MQ=60)
CCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAG > SRR4302535.2413418/1‑94 (MQ=60)
CCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAG < SRR4302535.4540170/94‑1 (MQ=60)
CCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGA < SRR4302535.2601022/94‑1 (MQ=60)
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TTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGA > NC_000913/3362601‑3362786
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
