Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,362,693	T→C	L751P (CTC→CCC)	yhcD →	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,362,693	0	T	C	99.8%	1290.3 / ‑5.3	404	L751P (CTC→CCC)	yhcD	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (197/205); total (198/206)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.59e-01

Only 100 of 408 total aligned reads displayed.

TCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAA  >  NC_000913/3362602‑3362782

 ccGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCa                                                                                         >  1:3245750/1‑93 (MQ=255)

   gACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAAt                                                                                       <  2:1619338/93‑1 (MQ=255)

    aCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATa                                                                                      <  1:5190703/93‑1 (MQ=255)

    aCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATa                                                                                      >  2:5269618/1‑93 (MQ=255)

       gCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACa                                                                                   >  1:584733/1‑93 (MQ=255)

       gCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACa                                                                                   >  2:1529068/1‑93 (MQ=255)

         aaaaaaCTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATc                                                                                 <  1:2581610/93‑1 (MQ=255)

          aaaaaCTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCa                                                                                >  2:3230045/1‑93 (MQ=255)

             aaCTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAc                                                                             <  2:1163760/93‑1 (MQ=255)

               cTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCATCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCg                                                                           <  2:5907669/93‑1 (MQ=255)

                tGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCgg                                                                          <  1:5102919/93‑1 (MQ=255)

                 gCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGa                                                                         <  2:7088316/93‑1 (MQ=255)

                   ccAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACa                                                                       <  1:1429079/93‑1 (MQ=255)

                   ccAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACa                                                                       >  1:1358613/1‑93 (MQ=255)

                   ccAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACa                                                                       <  1:4040822/93‑1 (MQ=255)

                    cAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAt                                                                      >  2:2890067/1‑93 (MQ=255)

                    cAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAt                                                                      >  1:1869051/1‑93 (MQ=255)

                     agagGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATg                                                                     <  1:27318/93‑1 (MQ=255)

                      gagGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATgg                                                                    <  2:5170774/93‑1 (MQ=255)

                      gagGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATgg                                                                    <  1:93826/93‑1 (MQ=255)

                      gagGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATgg                                                                    >  1:4134689/1‑93 (MQ=255)

                      gagGCGTTGCGATTGAAGATAGTGAAGGCAACGATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATgg                                                                    >  2:6584926/1‑93 (MQ=255)

                        ggCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTg                                                                  >  2:5359967/1‑93 (MQ=255)

                         gCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGc                                                                 <  1:1095794/93‑1 (MQ=255)

                           gTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTa                                                               <  2:4303882/93‑1 (MQ=255)

                           gTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTa                                                               <  1:2451595/93‑1 (MQ=255)

                           gTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTa                                                               <  1:4807032/93‑1 (MQ=255)

                           gTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTa                                                               <  1:5293711/93‑1 (MQ=255)

                           gTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTa                                                               >  1:7115476/1‑93 (MQ=255)

                           gTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTa                                                               >  1:5720649/1‑93 (MQ=255)

                            ttGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAg                                                              <  1:1641311/93‑1 (MQ=255)

                            ttGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAg                                                              >  2:3821147/1‑93 (MQ=255)

                             tGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGa                                                             <  1:1785562/93‑1 (MQ=255)

                             tGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGa                                                             >  2:7546139/1‑93 (MQ=255)

                              gCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGat                                                            <  1:2298739/93‑1 (MQ=255)

                              gCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGat                                                            <  2:2629983/93‑1 (MQ=255)

                                gATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGatat                                                          >  1:4304775/1‑93 (MQ=255)

                                 aTTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGAtata                                                         <  1:6410928/93‑1 (MQ=255)

                                 aTTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGAtata                                                         >  1:7837212/1‑93 (MQ=255)

                                  ttGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATaa                                                        >  1:4534513/1‑93 (MQ=255)

                                   tGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATaaa                                                       <  1:7474780/93‑1 (MQ=255)

                                    gAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATaaaa                                                      >  2:2203292/1‑93 (MQ=255)

                                    gAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATaaaa                                                      >  1:104339/1‑93 (MQ=255)

                                     aaGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAg                                                     >  2:4230085/1‑93 (MQ=255)

                                      aGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGa                                                    <  1:6087757/93‑1 (MQ=255)

                                       gATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGAt                                                   <  2:7451674/93‑1 (MQ=255)

                                       gATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGAt                                                   <  1:6486404/93‑1 (MQ=255)

                                       gATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGAt                                                   >  2:6717987/1‑93 (MQ=255)

                                        aTAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATg                                                  >  2:1336032/1‑93 (MQ=255)

                                         tAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGa                                                 <  2:1741301/93‑1 (MQ=255)

                                         tAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGa                                                 >  1:4185988/1‑93 (MQ=255)

                                         tAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGa                                                 >  1:3943321/1‑93 (MQ=255)

                                         tAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGa                                                 <  1:7339854/93‑1 (MQ=255)

                                           gTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGagc                                               >  2:7754809/1‑93 (MQ=255)

                                            tGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGagca                                              <  1:7727532/93‑1 (MQ=255)

                                             gAAGGCAACTATCTGACAAGATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGagcag                                             <  2:5888741/93‑1 (MQ=255)

                                             gAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGagcag                                             <  1:7620673/93‑1 (MQ=255)

                                                 gCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAAt                                         >  2:4837199/1‑93 (MQ=255)

                                                   aaCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCa                                       >  1:2010345/1‑93 (MQ=255)

                                                    aCTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAt                                      >  2:1438048/1‑93 (MQ=255)

                                                      tATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGc                                    <  2:6950931/93‑1 (MQ=255)

                                                      tATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGc                                    >  1:6798782/1‑93 (MQ=255)

                                                      tATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGc                                    >  1:2175935/1‑93 (MQ=255)

                                                      tATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGc                                    <  2:4142165/93‑1 (MQ=255)

                                                       aTCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGcc                                   <  2:736455/93‑1 (MQ=255)

                                                       aTCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGcc                                   >  2:3926383/1‑93 (MQ=255)

                                                          tGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTa                                >  2:4992940/1‑93 (MQ=255)

                                                           gACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAt                               <  2:5093102/93‑1 (MQ=255)

                                                           gACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAt                               >  1:3632662/1‑93 (MQ=255)

                                                            acaacaTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAtt                              >  2:6250998/1‑93 (MQ=255)

                                                             caacaTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTc                             <  1:2843425/93‑1 (MQ=255)

                                                                caTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCAcc                          >  2:3491826/1‑93 (MQ=255)

                                                                caTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCAcc                          <  1:4519399/93‑1 (MQ=255)

                                                                caTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCAcc                          <  1:6357549/93‑1 (MQ=255)

                                                                caTCAGTGGATGACGGTGTTGTATTCCCCAATAACAGCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCAcc                          <  2:7935427/93‑1 (MQ=255)

                                                                 aTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCt                         <  1:3454954/93‑1 (MQ=255)

                                                                   cAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTa                       >  2:3127945/1‑93 (MQ=255)

                                                                   cAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAACGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTa                       >  2:1981368/1‑93 (MQ=255)

                                                                    aGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTAc                      >  1:6222143/1‑93 (MQ=255)

                                                                    aGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTAc                      >  2:5851456/1‑93 (MQ=255)

                                                                     gTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACa                     <  2:6882679/93‑1 (MQ=255)

                                                                     gTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACa                     <  1:5796586/93‑1 (MQ=255)

                                                                     gTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACa                     <  2:6496364/93‑1 (MQ=255)

                                                                      tGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACAt                    <  2:5716351/93‑1 (MQ=255)

                                                                         aTGACGGTGTTGTATTCCCCAATAACATCAAACCGGACGTGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTcc                 >  2:5342097/1‑93 (MQ=255)

                                                                         aTGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTcc                 >  2:4510488/1‑93 (MQ=255)

                                                                          tGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTccc                >  2:2743350/1‑93 (MQ=255)

                                                                           gACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCa               <  1:5998132/93‑1 (MQ=255)

                                                                               gtgtTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaag           <  2:6081179/93‑1 (MQ=255)

                                                                               gtgtTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaag           >  1:1532642/1‑93 (MQ=255)

                                                                                tgttgtATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaaga          >  2:4631244/1‑93 (MQ=255)

                                                                                tgttgtATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaaga          >  2:2472357/1‑93 (MQ=255)

                                                                                tgttgtATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCagaaga          >  2:680051/1‑93 (MQ=255)

                                                                                  ttgtATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATg        >  2:3684586/1‑93 (MQ=255)

                                                                                   tgtATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGc       <  1:817075/93‑1 (MQ=255)

                                                                                    gtATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCa      >  1:2922533/1‑93 (MQ=255)

                                                                                    gtATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCa      <  2:1084686/93‑1 (MQ=255)

                                                                                     tATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCTTATTCACCTTACATTCCCACAAGATGCAc     >  1:1157571/1‑93 (MQ=255)

                                                                                       ttCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCa   >  1:6945995/1‑93 (MQ=255)

                                                                                        tCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCaa  >  1:5513485/1‑93 (MQ=255)

TCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAA  >  NC_000913/3362602‑3362782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 211 total aligned reads displayed.

TTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGA  >  NC_000913/3362601‑3362786

TTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACCTCAGTGGATGACGGTGTTGTATTCCCC                                                                                              >  SRR4302543.3299011/1‑94 (MQ=60)

TTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCC                                                                                              >  SRR4302543.3299013/1‑94 (MQ=60)

TTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGAATCACGGGGTTGTATTCCTC                                                                                              >  SRR4302543.6828588/1‑94 (MQ=60)

 TCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCA                                                                                             >  SRR4302543.3275101/1‑94 (MQ=60)

  CCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAA                                                                                            <  SRR4302543.1794820/94‑1 (MQ=60)

  CCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAA                                                                                            <  SRR4302543.1175822/94‑1 (MQ=60)

   CGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAAT                                                                                           <  SRR4302543.6953925/94‑1 (MQ=60)

   CGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAAT                                                                                           <  SRR4302543.7617811/94‑1 (MQ=60)

    GACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATA                                                                                          >  SRR4302543.4565045/1‑94 (MQ=60)

     ACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAA                                                                                         <  SRR4302543.5237514/94‑1 (MQ=60)

     ACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAA                                                                                         <  SRR4302543.2865037/94‑1 (MQ=60)

      CGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAAC                                                                                        >  SRR4302543.3931749/1‑94 (MQ=60)

      CGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAAC                                                                                        >  SRR4302543.6189316/1‑94 (MQ=60)

       GGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACA                                                                                       >  SRR4302543.590074/1‑94 (MQ=60)

       GGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACA                                                                                       >  SRR4302543.590073/1‑94 (MQ=60)

        GCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACAT                                                                                      <  SRR4302543.2546205/94‑1 (MQ=60)

        GCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACAT                                                                                      <  SRR4302543.4206193/94‑1 (MQ=60)

         CAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATC                                                                                     <  SRR4302543.1527013/94‑1 (MQ=60)

         CAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATC                                                                                     <  SRR4302543.2488784/94‑1 (MQ=60)

         CAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATC                                                                                     >  SRR4302543.7619956/1‑94 (MQ=60)

          AAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCA                                                                                    <  SRR4302543.2605110/94‑1 (MQ=60)

           AAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAA                                                                                   <  SRR4302543.6394278/94‑1 (MQ=60)

           AAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAA                                                                                   >  SRR4302543.7024241/1‑94 (MQ=60)

            AAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAA                                                                                  <  SRR4302543.4626085/94‑1 (MQ=60)

            AAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAA                                                                                  >  SRR4302543.4567158/1‑94 (MQ=60)

             AAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAC                                                                                 <  SRR4302543.2441084/94‑1 (MQ=60)

             AAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAAC                                                                                 >  SRR4302543.6351624/1‑94 (MQ=60)

              AACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACC                                                                                <  SRR4302543.1756705/94‑1 (MQ=60)

              AACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACC                                                                                <  SRR4302543.2476948/94‑1 (MQ=60)

              AACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACC                                                                                <  SRR4302543.5632243/94‑1 (MQ=60)

              AACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACC                                                                                <  SRR4302543.6444785/94‑1 (MQ=60)

               ACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCG                                                                               <  SRR4302543.4385041/94‑1 (MQ=60)

               ACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCG                                                                               <  SRR4302543.6067719/94‑1 (MQ=60)

               ACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCG                                                                               <  SRR4302543.304429/94‑1 (MQ=60)

                CTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGG                                                                              >  SRR4302543.7417336/1‑94 (MQ=60)

                CTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGG                                                                              >  SRR4302543.866683/1‑94 (MQ=60)

                CTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGG                                                                              >  SRR4302543.881009/1‑94 (MQ=60)

                CTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGG                                                                              >  SRR4302543.4418520/1‑94 (MQ=60)

                 TGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGA                                                                             <  SRR4302543.5149110/94‑1 (MQ=60)

                   CCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACA                                                                           >  SRR4302543.1370777/1‑94 (MQ=60)

                   CCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACA                                                                           <  SRR4302543.1553844/94‑1 (MQ=60)

                   CCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACA                                                                           >  SRR4302543.524417/1‑94 (MQ=60)

                   CCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACA                                                                           >  SRR4302543.40099/1‑94 (MQ=60)

                    CCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGCCGGTGTTGTATTCCCCAATAACATCAAACCGGACAT                                                                          >  SRR4302543.4216855/1‑94 (MQ=60)

                    CCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAT                                                                          <  SRR4302543.4261452/94‑1 (MQ=60)

                    CCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAT                                                                          <  SRR4302543.4261453/94‑1 (MQ=60)

                    CCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAT                                                                          >  SRR4302543.1885840/1‑94 (MQ=60)

                    CCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAT                                                                          <  SRR4302543.1097219/94‑1 (MQ=60)

                    CCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAT                                                                          <  SRR4302543.1442005/94‑1 (MQ=60)

                    CCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACAT                                                                          <  SRR4302543.4076985/94‑1 (MQ=60)

                     CAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATG                                                                         <  SRR4302543.4939926/94‑1 (MQ=60)

                     CAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATG                                                                         >  SRR4302543.5716582/1‑94 (MQ=60)

                      AGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGG                                                                        >  SRR4302543.4172003/1‑94 (MQ=60)

                      AGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGG                                                                        <  SRR4302543.27562/94‑1 (MQ=60)

                       GAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGT                                                                       <  SRR4302543.5487521/94‑1 (MQ=60)

                       GAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGT                                                                       <  SRR4302543.3591213/94‑1 (MQ=60)

                       GAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGT                                                                       <  SRR4302543.94699/94‑1 (MQ=60)

                        AGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTG                                                                      <  SRR4302543.5885698/94‑1 (MQ=60)

                          GCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCT                                                                    >  SRR4302543.5789549/1‑94 (MQ=60)

                          GCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCT                                                                    <  SRR4302543.6984808/94‑1 (MQ=60)

                          GCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCT                                                                    <  SRR4302543.1105653/94‑1 (MQ=60)

                           CGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTA                                                                   >  SRR4302543.5472262/1‑94 (MQ=60)

                           CGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTA                                                                   >  SRR4302543.7184596/1‑94 (MQ=60)

                           CGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTA                                                                   >  SRR4302543.110569/1‑94 (MQ=60)

                            GTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAG                                                                  >  SRR4302543.5215401/1‑94 (MQ=60)

                            GTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAG                                                                  <  SRR4302543.4850937/94‑1 (MQ=60)

                            GTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAG                                                                  >  SRR4302543.6104609/1‑94 (MQ=60)

                            GTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAG                                                                  <  SRR4302543.7903720/94‑1 (MQ=60)

                            GTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAG                                                                  <  SRR4302543.5341515/94‑1 (MQ=60)

                            GTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAA                                                                  <  SRR4302543.2473711/94‑1 (MQ=60)

                            GTTGCGATTGAAGATAGTGAAGGCAAATATCTGACAACATCAGTGGATGACGGTGTTGTATTCCACAATAACATCAAACCGGACATGGTGCTAG                                                                  >  SRR4302543.4004571/1‑94 (MQ=60)

                             TTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGA                                                                 <  SRR4302543.6361893/94‑1 (MQ=60)

                             TTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGA                                                                 <  SRR4302543.1655954/94‑1 (MQ=60)

                              TGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGAT                                                                <  SRR4302543.5261910/94‑1 (MQ=60)

                              TGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGAT                                                                <  SRR4302543.1801529/94‑1 (MQ=60)

                               GCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATA                                                               <  SRR4302543.2319694/94‑1 (MQ=60)

                               GCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATA                                                               <  SRR4302543.1435651/94‑1 (MQ=60)

                                CGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATAT                                                              >  SRR4302543.1574610/1‑94 (MQ=60)

                                CGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATAT                                                              <  SRR4302543.2170744/94‑1 (MQ=60)

                                CGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATAT                                                              >  SRR4302543.4343878/1‑94 (MQ=60)

                                CGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATAT                                                              >  SRR4302543.1802250/1‑94 (MQ=60)

                                 GATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATA                                                             >  SRR4302543.7910976/1‑94 (MQ=60)

                                 GATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATA                                                             <  SRR4302543.2894076/94‑1 (MQ=60)

                                  ATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAA                                                            >  SRR4302543.4575793/1‑94 (MQ=60)

                                  ATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAA                                                            <  SRR4302543.6471299/94‑1 (MQ=60)

                                    TGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAA                                                          >  SRR4302543.105300/1‑94 (MQ=60)

                                    TGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAA                                                          <  SRR4302543.7546349/94‑1 (MQ=60)

                                    TGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAA                                                          <  SRR4302543.3132678/94‑1 (MQ=60)

                                     GAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAG                                                         <  SRR4302543.7123326/94‑1 (MQ=60)

                                     GAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAG                                                         <  SRR4302543.7526979/94‑1 (MQ=60)

                                      AAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGA                                                        <  SRR4302543.108652/94‑1 (MQ=60)

                                       AGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGAT                                                       <  SRR4302543.6145452/94‑1 (MQ=60)

                                       AGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGAT                                                       <  SRR4302543.4447749/94‑1 (MQ=60)

                                        GATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATG                                                      >  SRR4302543.5169584/1‑94 (MQ=60)

                                        GATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATG                                                      >  SRR4302543.595640/1‑94 (MQ=60)

                                        GATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATG                                                      <  SRR4302543.6547517/94‑1 (MQ=60)

                                        GATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATG                                                      >  SRR4302543.7269028/1‑94 (MQ=60)

                                         ATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGA                                                     >  SRR4302543.4223936/1‑94 (MQ=60)

                                         ATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGA                                                     >  SRR4302543.5003871/1‑94 (MQ=60)

                                         ATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGA                                                     >  SRR4302543.2003197/1‑94 (MQ=60)

                                         ATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGA                                                     >  SRR4302543.3978185/1‑94 (MQ=60)

                                         ATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGATGTATTCCCCAATACGATCAAACCGGACATGGTGCTAGATATAAAAGATGA                                                     >  SRR4302543.5591136/1‑94 (MQ=60)

                                          TAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAG                                                    <  SRR4302543.6536211/94‑1 (MQ=60)

                                          TAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAG                                                    <  SRR4302543.7410467/94‑1 (MQ=60)

                                           AGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGC                                                   <  SRR4302543.262943/94‑1 (MQ=60)

                                             TGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAG                                                 <  SRR4302543.6529701/94‑1 (MQ=60)

                                             TGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAG                                                 <  SRR4302543.2069796/94‑1 (MQ=60)

                                             TGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAG                                                 <  SRR4302543.7800574/94‑1 (MQ=60)

                                              GAAGGCAACTATCTGACAACGTCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGC                                                <  SRR4302543.6031949/94‑1 (MQ=60)

                                              GAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGC                                                <  SRR4302543.7692998/94‑1 (MQ=60)

                                                AGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAA                                              <  SRR4302543.1472759/94‑1 (MQ=60)

                                                AGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAA                                              >  SRR4302543.3137801/1‑94 (MQ=60)

                                                 GGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAAT                                             >  SRR4302543.6344658/1‑94 (MQ=60)

                                                 GGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAAT                                             >  SRR4302543.2290047/1‑94 (MQ=60)

                                                 GGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAAT                                             >  SRR4302543.1125514/1‑94 (MQ=60)

                                                 GGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAAT                                             >  SRR4302543.3946343/1‑94 (MQ=60)

                                                  GCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATC                                            <  SRR4302543.4117103/94‑1 (MQ=60)

                                                  GCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATC                                            <  SRR4302543.7748732/94‑1 (MQ=60)

                                                   CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTATATATAAAAGATGAGCAGCAATCA                                           >  SRR4302543.7070039/1‑94 (MQ=60)

                                                   CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCA                                           <  SRR4302543.7730382/94‑1 (MQ=60)

                                                   CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCA                                           >  SRR4302543.2028410/1‑94 (MQ=60)

                                                   CAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCA                                           >  SRR4302543.810931/1‑94 (MQ=60)

                                                    AACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAT                                          <  SRR4302543.2257031/94‑1 (MQ=60)

                                                    AACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAT                                          <  SRR4302543.145457/94‑1 (MQ=60)

                                                    AACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAT                                          <  SRR4302543.2774048/94‑1 (MQ=60)

                                                    AACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAT                                          <  SRR4302543.3513627/94‑1 (MQ=60)

                                                    AACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCAT                                          <  SRR4302543.331452/94‑1 (MQ=60)

                                                     ACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATG                                         >  SRR4302543.3339777/1‑94 (MQ=60)

                                                      CTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGC                                        >  SRR4302543.2195431/1‑94 (MQ=60)

                                                      CTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGC                                        >  SRR4302543.6862986/1‑94 (MQ=60)

                                                       TATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCC                                       <  SRR4302543.4623640/94‑1 (MQ=60)

                                                       TATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCC                                       >  SRR4302543.5175767/1‑94 (MQ=60)

                                                        ATCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCG                                      <  SRR4302543.2945829/94‑1 (MQ=60)

                                                         TCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGT                                     <  SRR4302543.92947/94‑1 (MQ=60)

                                                         TCTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGT                                     >  SRR4302543.1884521/1‑94 (MQ=60)

                                                          CTGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTA                                    >  SRR4302543.1135634/1‑94 (MQ=60)

                                                           TGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAT                                   >  SRR4302543.4566550/1‑94 (MQ=60)

                                                           TGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAT                                   >  SRR4302543.3664643/1‑94 (MQ=60)

                                                           TGACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTAT                                   >  SRR4302543.7819042/1‑94 (MQ=60)

                                                            GACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATT                                  >  SRR4302543.5992726/1‑94 (MQ=60)

                                                            GACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATT                                  >  SRR4302543.7741846/1‑94 (MQ=60)

                                                             ACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTC                                 <  SRR4302543.6646951/94‑1 (MQ=60)

                                                             ACAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTC                                 <  SRR4302543.5523755/94‑1 (MQ=60)

                                                              CAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCA                                >  SRR4302543.2905436/1‑94 (MQ=60)

                                                              CAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCA                                <  SRR4302543.1339689/94‑1 (MQ=60)

                                                              CAACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCA                                <  SRR4302543.2869403/94‑1 (MQ=60)

                                                               AACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCAC                               >  SRR4302543.1930090/1‑94 (MQ=60)

                                                               AACATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCAC                               >  SRR4302543.2751061/1‑94 (MQ=60)

                                                                 CATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCT                             <  SRR4302543.4560508/94‑1 (MQ=60)

                                                                 CATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCT                             <  SRR4302543.1373181/94‑1 (MQ=60)

                                                                 CATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCT                             <  SRR4302543.1748596/94‑1 (MQ=60)

                                                                 CATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCT                             <  SRR4302543.6417330/94‑1 (MQ=60)

                                                                  ATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTT                            <  SRR4302543.3485895/94‑1 (MQ=60)

                                                                  ATCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTT                            <  SRR4302543.3485894/94‑1 (MQ=60)

                                                                   TCAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTA                           <  SRR4302543.1228016/94‑1 (MQ=60)

                                                                    CAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTAC                          <  SRR4302543.7195718/94‑1 (MQ=60)

                                                                    CAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTAC                          >  SRR4302543.6280880/1‑94 (MQ=60)

                                                                    CAGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTAC                          <  SRR4302543.238804/94‑1 (MQ=60)

                                                                     aggggaggacgggggTGTATTCCCCAATAACATCAAACCGGACATGGTGCGAGATATAAAAGAGGAGCAGCAAGCATGCCGTATTCACCacaca                         >  SRR4302543.7115518/16‑89 (MQ=60)

                                                                     AGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACA                         <  SRR4302543.4789204/94‑1 (MQ=60)

                                                                     AGTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACA                         >  SRR4302543.2412984/1‑94 (MQ=60)

                                                                      GTGGATGACGGTTTTCTATTCCCCAATAACATCACACCTGACATGGTGCTAGATATAAAAGATGATCAGCAATCATGCCGTATTCCCCTTACAT                        <  SRR4302543.5849320/94‑1 (MQ=60)

                                                                      GTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACAT                        <  SRR4302543.5849318/94‑1 (MQ=60)

                                                                      GTGGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACAT                        <  SRR4302543.5849319/94‑1 (MQ=60)

                                                                        GGATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTC                      >  SRR4302543.2798618/1‑94 (MQ=60)

                                                                         GATGACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCC                     <  SRR4302543.5272452/94‑1 (MQ=60)

                                                                            GACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAG                  <  SRR4302543.3866489/94‑1 (MQ=60)

                                                                            GACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAG                  <  SRR4302543.6053184/94‑1 (MQ=60)

                                                                            GACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAG                  <  SRR4302543.7935951/94‑1 (MQ=60)

                                                                             ACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGA                 >  SRR4302543.2222213/1‑94 (MQ=60)

                                                                             ACGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGA                 <  SRR4302543.2020296/94‑1 (MQ=60)

                                                                              CGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAA                >  SRR4302543.7865982/1‑94 (MQ=60)

                                                                              CGGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAA                <  SRR4302543.4162477/94‑1 (MQ=60)

                                                                               GGTGTTGTATTCCCCAATAACATCAATCCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAG               <  SRR4302543.4047020/94‑1 (MQ=60)

                                                                               GGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAG               >  SRR4302543.1546380/1‑94 (MQ=60)

                                                                               GGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAG               >  SRR4302543.6160484/1‑94 (MQ=60)

                                                                               GGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAG               >  SRR4302543.5813417/1‑94 (MQ=60)

                                                                               GGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAG               >  SRR4302543.1812259/1‑94 (MQ=60)

                                                                               GGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAG               >  SRR4302543.1415926/1‑94 (MQ=60)

                                                                               GGTGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAG               >  SRR4302543.1598872/1‑94 (MQ=60)

                                                                                 TGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGAT             <  SRR4302543.4554363/94‑1 (MQ=60)

                                                                                 TGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGAT             <  SRR4302543.6497320/94‑1 (MQ=60)

                                                                                 TGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGAT             <  SRR4302543.7215517/94‑1 (MQ=60)

                                                                                 TGTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGAT             <  SRR4302543.6105335/94‑1 (MQ=60)

                                                                                  GTTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATG            <  SRR4302543.6807142/94‑1 (MQ=60)

                                                                                   TTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGC           <  SRR4302543.2548369/94‑1 (MQ=60)

                                                                                   TTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGC           >  SRR4302543.6427644/1‑94 (MQ=60)

                                                                                   TTGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGC           >  SRR4302543.6427643/1‑94 (MQ=60)

                                                                                    TGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCA          <  SRR4302543.824267/94‑1 (MQ=60)

                                                                                    TGTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCA          >  SRR4302543.2949084/1‑94 (MQ=60)

                                                                                     GTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCTTATTCACCTTACATTCCCACAAGATGCAC         >  SRR4302543.1168109/1‑94 (MQ=60)

                                                                                     GTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCAC         >  SRR4302543.1168107/1‑94 (MQ=60)

                                                                                     GTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCAC         >  SRR4302543.7455421/1‑94 (MQ=60)

                                                                                     GTATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCAC         <  SRR4302543.94347/94‑1 (MQ=60)

                                                                                      TATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACC        <  SRR4302543.7974704/94‑1 (MQ=60)

                                                                                       ATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCA       >  SRR4302543.4154648/1‑94 (MQ=60)

                                                                                       ATTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCA       >  SRR4302543.7011348/1‑94 (MQ=60)

                                                                                        TTCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAA      >  SRR4302543.5563553/1‑94 (MQ=60)

                                                                                         TCCCCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAA     <  SRR4302543.4268460/94‑1 (MQ=60)

                                                                                            CCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGA  >  SRR4302543.2272541/1‑94 (MQ=60)

TTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGA  >  NC_000913/3362601‑3362786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`