Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,475,807 |
T→C |
T110A (ACT→GCT) |
slyD ← |
FKBP‑type peptidyl‑prolyl cis‑trans isomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,475,807 | 0 | T | C | 100.0%
| 708.8
/ NA
| 226 | T110A (ACT→GCT) | slyD | FKBP‑type peptidyl‑prolyl cis‑trans isomerase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/103); total (123/103) |
Only 100 of 237 total aligned reads displayed.
GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG > NC_000913/3475717‑3475896
|
gAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGa > 2:2454286/1‑93 (MQ=255)
aaTCGCCACAACTTCAACGTTGAACTTCAGGTTCTGCCCGCCCAGCATGTGGTTACCATCACCCACGACGTGATCGTCTTCAACCGCAGCGAt < 2:3668054/93‑1 (MQ=255)
aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt > 2:3579766/1‑93 (MQ=255)
aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt > 2:1692196/1‑93 (MQ=255)
aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt < 2:1353337/93‑1 (MQ=255)
aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt > 1:1760020/1‑93 (MQ=255)
acGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAttt < 1:1434370/92‑1 (MQ=255)
cGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTc < 2:1796782/93‑1 (MQ=255)
gCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCa > 1:2669174/1‑93 (MQ=255)
ccACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCaa < 2:2865807/93‑1 (MQ=255)
cacaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCCCGACGTGATCGTCTTCAACCGCAGCGATTTCAAc > 2:983402/1‑93 (MQ=255)
cacaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAc > 2:947264/1‑93 (MQ=255)
cacaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAc > 1:3119467/1‑93 (MQ=255)
acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc > 1:4577707/1‑93 (MQ=255)
acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc < 2:128624/93‑1 (MQ=255)
acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc > 1:1307484/1‑93 (MQ=255)
caACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAGCg > 2:3353055/1‑93 (MQ=255)
aaCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCgg > 2:4672561/1‑93 (MQ=255)
aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt > 2:1211287/1‑93 (MQ=255)
cTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTa < 1:1676800/93‑1 (MQ=255)
ttCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAc > 1:4326004/1‑93 (MQ=255)
ttCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAc > 1:4459961/1‑93 (MQ=255)
tCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAcc < 2:2977968/93‑1 (MQ=255)
aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg > 1:2752858/1‑93 (MQ=255)
aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg > 2:4440002/1‑93 (MQ=255)
aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg > 1:4084765/1‑93 (MQ=255)
aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg > 2:89344/1‑93 (MQ=255)
aCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGa > 2:3342001/1‑93 (MQ=255)
cGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAc < 2:2587291/93‑1 (MQ=255)
gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc > 2:1824666/1‑93 (MQ=255)
gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc > 1:2011851/1‑93 (MQ=255)
ttGAATTTCAGGTTCTGGCCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAccc < 1:746465/93‑1 (MQ=255)
ttGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAccc > 2:752945/1‑93 (MQ=255)
aaTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTgg > 1:1025459/1‑93 (MQ=255)
aTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGt > 2:4350770/1‑93 (MQ=255)
aTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGt < 2:600936/93‑1 (MQ=255)
tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTc > 2:4178592/1‑93 (MQ=255)
tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTc > 1:572866/1‑93 (MQ=255)
aGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGtt > 2:3990908/1‑93 (MQ=255)
ggTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGttt > 2:3416023/1‑93 (MQ=255)
ttCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCa < 2:173022/93‑1 (MQ=255)
ttCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCa < 1:3464518/93‑1 (MQ=255)
ttCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCa < 1:1165597/93‑1 (MQ=255)
tCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAg > 1:782588/1‑93 (MQ=255)
tGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGcc > 2:2683539/1‑93 (MQ=255)
ccGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAgg < 1:3632276/93‑1 (MQ=255)
cGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGa < 2:4590040/93‑1 (MQ=255)
aGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGc < 1:924364/93‑1 (MQ=255)
aGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGc > 2:680325/1‑93 (MQ=255)
gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGct > 2:2231864/1‑92 (MQ=255)
gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCa > 1:455289/1‑93 (MQ=255)
gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCa > 1:1964050/1‑93 (MQ=255)
aTGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGTTTTCAGCCAGGAAACGCAta < 2:4513442/93‑1 (MQ=255)
aTGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAta < 1:2225597/93‑1 (MQ=255)
aTGTGGTTACCATCAACCACGACGTGATCGTCTTCAACAGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAta < 2:2400326/93‑1 (MQ=255)
tgtgGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtac > 1:3804709/1‑93 (MQ=255)
tgGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacct > 2:138383/1‑93 (MQ=255)
gTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctac > 2:3438462/1‑93 (MQ=255)
gTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctac < 1:2937348/93‑1 (MQ=255)
taaCCATCACCCACGACGTGATCGTCTACAACCGCAGCGATTTCAACCGGTGCCGGCCCCTGGTCGGTTTCAGCCAGGAAACGCAtacctacc < 2:3259252/91‑1 (MQ=255)
tACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATacctacct < 2:1146802/93‑1 (MQ=255)
tACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATacctacct > 1:692300/1‑93 (MQ=255)
aCCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTg > 2:263171/1‑93 (MQ=255)
ccATCACCCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGc < 1:2237330/93‑1 (MQ=255)
cATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCa > 1:2551244/1‑93 (MQ=255)
aTCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGCTTCAGCCAGGAAAAGCATACCTACCTGCAg > 1:4280419/1‑93 (MQ=255)
aaCCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtc < 1:120926/93‑1 (MQ=255)
aCCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtca < 1:344050/93‑1 (MQ=255)
aCCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtca < 1:210592/93‑1 (MQ=255)
acgacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcatca > 1:514408/1‑93 (MQ=255)
cgacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCaa < 2:2710207/93‑1 (MQ=255)
cgacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCaa < 1:3950024/93‑1 (MQ=255)
gacgTGTTCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAAc > 1:1331942/1‑93 (MQ=255)
gacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATCCCTACCTGCAGTTCATCAAc < 2:4242567/93‑1 (MQ=255)
cttGATCTTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGc < 1:356434/91‑1 (MQ=255)
gTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGcc > 2:846959/1‑93 (MQ=255)
gTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGcc > 2:1246463/1‑93 (MQ=255)
gTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGcc < 2:4223206/93‑1 (MQ=255)
gATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCa < 1:509116/93‑1 (MQ=255)
gATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCa < 1:3373598/93‑1 (MQ=255)
tCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATa > 2:1504596/1‑93 (MQ=255)
cTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATa < 2:1888730/93‑1 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc > 2:2070486/1‑93 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc > 2:3867251/1‑93 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc > 1:152343/1‑93 (MQ=255)
cAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGt < 1:435117/93‑1 (MQ=255)
cAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGt < 2:3805138/93‑1 (MQ=255)
aaCCTCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAGCGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc < 2:219245/93‑1 (MQ=255)
aaCCGCAGCGATTTCAACCGGTACCGGCCCCTGGTCGGTTTCAGCCAGGAAACGCATACCTCCCTGCAGTTCATCAACGCCCATAAATACGTc < 2:2086601/93‑1 (MQ=255)
aaCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc < 1:1587931/93‑1 (MQ=255)
aCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCt < 1:2374525/93‑1 (MQ=255)
cGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCttt > 1:358346/1‑93 (MQ=255)
gCAGCGATTTCAACCGGTACCGGGCCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTa < 2:4605607/93‑1 (MQ=255)
gCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTa > 2:4478737/1‑93 (MQ=255)
gCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTa < 2:4136841/93‑1 (MQ=255)
gCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTa < 1:938232/93‑1 (MQ=255)
cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg < 2:3526509/93‑1 (MQ=255)
cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg > 1:1867591/1‑93 (MQ=255)
cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg < 1:4191468/93‑1 (MQ=255)
cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg < 2:293596/93‑1 (MQ=255)
|
GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG > NC_000913/3475717‑3475896
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGAAC > NC_000913/3475714‑3475900
|
CGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGC < SRR4302535.649381/94‑1 (MQ=60)
CGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGC > SRR4302535.3444332/1‑94 (MQ=60)
GCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCG > SRR4302535.3993434/1‑94 (MQ=60)
GCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCG < SRR4302535.2545851/94‑1 (MQ=60)
AATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATT > SRR4302535.1772762/1‑94 (MQ=60)
ACGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTC < SRR4302535.1444612/94‑1 (MQ=60)
CGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCA > SRR4302535.2688275/1‑94 (MQ=60)
CGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCA > SRR4302535.1715223/1‑94 (MQ=60)
CGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACAATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCA > SRR4302535.4631459/1‑94 (MQ=60)
CCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAC > SRR4302535.3141187/1‑94 (MQ=60)
CACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACC > SRR4302535.4091064/1‑94 (MQ=60)
CACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACC > SRR4302535.431869/1‑94 (MQ=60)
CACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACC > SRR4302535.4608893/1‑94 (MQ=60)
CACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACC > SRR4302535.1348398/1‑94 (MQ=60)
CACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACC > SRR4302535.1316823/1‑94 (MQ=60)
CTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAC > SRR4302535.4355585/1‑94 (MQ=60)
CTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAC < SRR4302535.1688944/94‑1 (MQ=60)
CTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAC > SRR4302535.4490550/1‑94 (MQ=60)
CAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGG > SRR4302535.4112699/1‑94 (MQ=60)
CAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGG > SRR4302535.1137118/1‑94 (MQ=60)
CAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGG > SRR4302535.2772476/1‑94 (MQ=60)
CGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACC > SRR4302535.2026346/1‑94 (MQ=60)
CGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACC > SRR4302535.3488741/1‑94 (MQ=60)
CGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACC > SRR4302535.1004631/1‑94 (MQ=60)
TTGAATTTCAGGTTCTGGCCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCT < SRR4302535.751715/94‑1 (MQ=60)
GAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGG > SRR4302535.1032743/1‑94 (MQ=60)
ATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTC > SRR4302535.576888/1‑94 (MQ=60)
TTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCG < SRR4302535.234871/94‑1 (MQ=60)
AGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTT > SRR4302535.2691975/1‑94 (MQ=60)
AGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTT < SRR4302535.810101/94‑1 (MQ=60)
AGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTT < SRR4302535.931742/94‑1 (MQ=60)
AGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGGTT > SRR4302535.133723/1‑94 (MQ=60)
TTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAG < SRR4302535.3488597/94‑1 (MQ=60)
TTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAG > SRR4302535.1631584/1‑94 (MQ=60)
TTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAG > SRR4302535.788081/1‑94 (MQ=60)
TTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAG < SRR4302535.1173922/94‑1 (MQ=60)
CTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCC > SRR4302535.3823966/1‑94 (MQ=60)
TGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCA < SRR4302535.4595264/94‑1 (MQ=60)
TGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCA > SRR4302535.221303/1‑94 (MQ=60)
CCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGA < SRR4302535.3657450/94‑1 (MQ=60)
GGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAA > SRR4302535.3271424/1‑94 (MQ=60)
GCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAAC < SRR4302535.3727094/94‑1 (MQ=60)
CCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACG > SRR4302535.1754982/1‑94 (MQ=60)
AGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCA > SRR4302535.458474/1‑94 (MQ=60)
AGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCA < SRR4302535.395329/94‑1 (MQ=60)
AGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCA < SRR4302535.930910/94‑1 (MQ=60)
AGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCA > SRR4302535.1978210/1‑94 (MQ=60)
GCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAT < SRR4302535.4314100/94‑1 (MQ=60)
CATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATA > SRR4302535.2712654/1‑94 (MQ=60)
CATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATA > SRR4302535.3031711/1‑94 (MQ=60)
CATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATA < SRR4302535.673366/94‑1 (MQ=60)
ATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATAC > SRR4302535.3830935/1‑94 (MQ=60)
ATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATAC > SRR4302535.75785/1‑94 (MQ=60)
ATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATAC > SRR4302535.120295/1‑94 (MQ=60)
ATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATAC < SRR4302535.2241432/94‑1 (MQ=60)
ATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGCACCCTGGTCGGTTTCAGCCACGAAACGCATAC > SRR4302535.619994/1‑94 (MQ=60)
GTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCT < SRR4302535.571336/94‑1 (MQ=60)
GTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCT > SRR4302535.1828199/1‑94 (MQ=60)
GGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTAC < SRR4302535.2807941/94‑1 (MQ=60)
GTTACCATCAACCACTACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACC < SRR4302535.198097/94‑1 (MQ=60)
GTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACC < SRR4302535.2958012/94‑1 (MQ=60)
GTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACC > SRR4302535.3652252/1‑94 (MQ=60)
TTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCT > SRR4302535.515315/1‑94 (MQ=60)
TTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCT > SRR4302535.697151/1‑94 (MQ=60)
CCATCACCCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCA < SRR4302535.2253248/94‑1 (MQ=60)
CCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCA > SRR4302535.2569613/1‑94 (MQ=60)
CCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCA < SRR4302535.1300674/94‑1 (MQ=60)
CATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAG < SRR4302535.2149567/94‑1 (MQ=60)
CATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGCTTCAGCCAGGAAAAGCATACCTACCTGCAG > SRR4302535.4309707/1‑94 (MQ=60)
ATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGT < SRR4302535.2450684/94‑1 (MQ=60)
AACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCA < SRR4302535.121774/94‑1 (MQ=60)
AACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCA < SRR4302535.1562828/94‑1 (MQ=60)
ACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCAT < SRR4302535.346425/94‑1 (MQ=60)
ACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCAT < SRR4302535.212039/94‑1 (MQ=60)
CACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCA < SRR4302535.990703/94‑1 (MQ=60)
CACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCA > SRR4302535.1451820/1‑94 (MQ=60)
CACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCA < SRR4302535.3210103/94‑1 (MQ=60)
CACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCA > SRR4302535.518004/1‑94 (MQ=60)
CGACGTGTTCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAAC > SRR4302535.1341445/1‑94 (MQ=60)
CGACGTGATCGTCTTGAGCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAAC < SRR4302535.2246892/94‑1 (MQ=60)
CGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAAC < SRR4302535.3976992/94‑1 (MQ=60)
CGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAAC < SRR4302535.4201947/94‑1 (MQ=60)
GACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACG > SRR4302535.3536217/1‑94 (MQ=60)
GACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACG < SRR4302535.4237154/94‑1 (MQ=60)
CTTGATCTTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCC < SRR4302535.358896/94‑1 (MQ=60)
CGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCC > SRR4302535.1472494/1‑94 (MQ=60)
CGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCC > SRR4302535.2641171/1‑94 (MQ=60)
GTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCC > SRR4302535.4535217/1‑94 (MQ=60)
GTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCC > SRR4302535.4669777/1‑94 (MQ=60)
TGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCA > SRR4302535.445593/1‑94 (MQ=60)
GATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCAT < SRR4302535.512676/94‑1 (MQ=60)
GATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCAT < SRR4302535.3397062/94‑1 (MQ=60)
TCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAA < SRR4302535.3992013/94‑1 (MQ=60)
TCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAA < SRR4302535.1899032/94‑1 (MQ=60)
CGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAA > SRR4302535.4364689/1‑94 (MQ=60)
GTCTTCACCCGCAGCGATTTCAACCGGTACCGGTCCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAT < SRR4302535.724375/94‑1 (MQ=60)
GTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAT < SRR4302535.2039549/94‑1 (MQ=60)
GTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAT > SRR4302535.1904888/1‑94 (MQ=60)
GTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAT > SRR4302535.907765/1‑94 (MQ=60)
CTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAC > SRR4302535.153411/1‑94 (MQ=60)
TTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACG < SRR4302535.1219984/94‑1 (MQ=60)
CAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTC < SRR4302535.438147/94‑1 (MQ=60)
AACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCT < SRR4302535.1599392/94‑1 (MQ=60)
ACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTT < SRR4302535.2391581/94‑1 (MQ=60)
ACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTT < SRR4302535.4559281/94‑1 (MQ=60)
CCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATCAATACGTCTTT > SRR4302535.360823/1‑94 (MQ=60)
CCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTT > SRR4302535.360824/1‑94 (MQ=60)
CGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTA > SRR4302535.3454784/1‑94 (MQ=60)
GCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG > SRR4302535.1881053/1‑94 (MQ=60)
GCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG < SRR4302535.944878/94‑1 (MQ=60)
GCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG < SRR4302535.2401191/94‑1 (MQ=60)
GCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG < SRR4302535.3468456/94‑1 (MQ=60)
CAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGG > SRR4302535.654514/1‑94 (MQ=60)
CAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGG < SRR4302535.4220152/94‑1 (MQ=60)
CAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGG > SRR4302535.3948978/1‑94 (MQ=60)
AGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGA > SRR4302535.4099404/1‑94 (MQ=60)
CGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGAAC < SRR4302535.1681373/94‑1 (MQ=60)
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CGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGAAC > NC_000913/3475714‑3475900
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
