Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,486,661 |
T→C |
D386G (GAT→GGT) |
argD ← |
acetylornithine delta‑aminotransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,486,661 | 0 | T | C | 100.0%
| 571.7
/ NA
| 183 | D386G (GAT→GGT) | argD | acetylornithine delta‑aminotransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (112/71); total (112/71) |
Only 100 of 185 total aligned reads displayed.
GACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCATCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAA > NC_000913/3486571‑3486750
|
gACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCt > 1:389243/1‑93 (MQ=255)
gACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCt > 2:3990781/1‑93 (MQ=255)
gACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCt > 1:443018/1‑93 (MQ=255)
gACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCt > 1:941100/1‑93 (MQ=255)
cATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTc > 1:1181342/1‑93 (MQ=255)
aTCTTTTTCCTGATGCTTCGTATTTACGGCCCAACCACCTTCGCCAACGCGTGGGCGAACCGTTGCGTTCCTTCATCGGTATTCGCACCTTcc > 2:3101963/1‑93 (MQ=255)
aTCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCGCCTTcc > 1:2568974/1‑93 (MQ=255)
aTCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTcc > 1:4291588/1‑93 (MQ=255)
aTCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTcc < 2:2895901/93‑1 (MQ=255)
tCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTcca > 1:4086037/1‑93 (MQ=255)
ttttGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccacc > 2:1205378/1‑93 (MQ=255)
ttttGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccacc > 1:2988110/1‑93 (MQ=255)
ttGCCTGATGCTTCGTATTTACGCCCCAACCCCCTTCGCCACCGCGTGTGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccaccac < 1:2779924/93‑1 (MQ=255)
tGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccaccacc > 2:1860306/1‑93 (MQ=255)
tGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccaccacc < 2:2679766/93‑1 (MQ=255)
gCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccaccacca > 2:2324426/1‑93 (MQ=255)
gCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccaccacca < 2:3717969/93‑1 (MQ=255)
gCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccaccacca > 2:1009541/1‑93 (MQ=255)
gCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccaccacca > 1:2565925/1‑93 (MQ=255)
cTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGc > 2:615908/1‑93 (MQ=255)
cTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGc < 1:4271502/93‑1 (MQ=255)
cTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGc < 1:3030308/93‑1 (MQ=255)
cTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGc > 2:1377347/1‑93 (MQ=255)
tGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCg < 1:2423759/93‑1 (MQ=255)
gATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGa > 1:3263677/1‑93 (MQ=255)
aTGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGAc > 1:401444/1‑93 (MQ=255)
aTGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGAc < 1:376999/93‑1 (MQ=255)
tGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACg > 1:73401/1‑93 (MQ=255)
tGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACg < 2:1741799/93‑1 (MQ=255)
cTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGt < 2:3200074/93‑1 (MQ=255)
ttCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTg > 2:3614429/1‑93 (MQ=255)
ttCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTg < 2:123232/93‑1 (MQ=255)
ttCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTg < 2:3823499/93‑1 (MQ=255)
gTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaa > 1:104330/1‑93 (MQ=255)
gTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaa > 2:3974810/1‑93 (MQ=255)
tATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaaa > 1:1444060/1‑93 (MQ=255)
tATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaaa > 1:1737539/1‑93 (MQ=255)
tATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaaa > 2:2654607/1‑93 (MQ=255)
tATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaaa > 1:4588451/1‑93 (MQ=255)
tATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaaa > 2:1052133/1‑93 (MQ=255)
tATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaaa > 1:2256583/1‑93 (MQ=255)
aTTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaaaa < 2:4316100/93‑1 (MQ=255)
tttACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAAc > 2:115629/1‑93 (MQ=255)
tttACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAAc > 1:717506/1‑93 (MQ=255)
ttACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACg < 1:3584544/93‑1 (MQ=255)
aCGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCa < 1:867076/93‑1 (MQ=255)
cGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCAt < 2:4080311/93‑1 (MQ=255)
gCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATc > 2:799044/1‑93 (MQ=255)
cccAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATcac > 1:3752230/1‑93 (MQ=255)
cccAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATcac > 2:516370/1‑93 (MQ=255)
cccAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATcac > 1:1844214/1‑93 (MQ=255)
ccAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATcaca < 2:635624/93‑1 (MQ=255)
cAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAt > 1:2130645/1‑93 (MQ=255)
aaCCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtc > 1:3224579/1‑93 (MQ=255)
accaccTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtcc > 1:1033049/1‑93 (MQ=255)
accaccTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtcc < 1:1521768/93‑1 (MQ=255)
ccaccTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccg > 2:4197970/1‑93 (MQ=255)
ccTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggtc > 2:2203176/1‑93 (MQ=255)
cTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggtcc > 1:383060/1‑93 (MQ=255)
cTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggtcc > 1:121171/1‑93 (MQ=255)
cTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggtcc < 2:3239677/93‑1 (MQ=255)
ttCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggtccg < 1:663552/93‑1 (MQ=255)
ttCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggtccg > 1:1127392/1‑93 (MQ=255)
ccACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAt > 1:477121/1‑93 (MQ=255)
cACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAtt < 1:415232/93‑1 (MQ=255)
aCCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTc > 1:1647095/1‑93 (MQ=255)
aCCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTc > 1:1805767/1‑93 (MQ=255)
ccGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAttaa < 2:2958721/93‑3 (MQ=255)
cgcgTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCTGGCATTCAg < 1:3419390/93‑1 (MQ=255)
cgcgTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAg < 1:1782196/93‑1 (MQ=255)
cgTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCa < 2:4366243/93‑1 (MQ=255)
cgTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCa > 2:155546/1‑93 (MQ=255)
tGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCAcc > 2:4122876/1‑93 (MQ=255)
gggCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCa < 2:4615694/93‑1 (MQ=255)
gAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTAc < 2:688908/93‑1 (MQ=255)
gAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTAc > 2:1922592/1‑93 (MQ=255)
gAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTAc < 2:3942843/93‑1 (MQ=255)
aCGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGcc > 2:1708138/1‑93 (MQ=255)
aCGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGcc > 2:3656034/1‑93 (MQ=255)
gTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAg > 1:902731/1‑93 (MQ=255)
cttGCATCCCTTCATCGATATCCGCCCCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAg < 2:3286678/92‑1 (MQ=255)
ttGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGc > 1:1601741/1‑93 (MQ=255)
gCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCct > 1:2204312/1‑93 (MQ=255)
cATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCctc < 2:3025149/93‑1 (MQ=255)
tCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTg > 1:4040751/1‑93 (MQ=255)
cTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTgcgc > 1:596372/1‑93 (MQ=255)
ttCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGcc > 1:1557397/1‑93 (MQ=255)
ttCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGcc > 1:3522556/1‑93 (MQ=255)
tCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGccc < 2:2807408/93‑1 (MQ=255)
aTCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGc > 2:4144222/1‑93 (MQ=255)
tCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCa < 1:605438/93‑1 (MQ=255)
cGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCAt > 2:2145924/1‑93 (MQ=255)
gATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATa > 1:4488193/1‑93 (MQ=255)
gATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATa > 2:3851479/1‑93 (MQ=255)
gATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATa > 2:3368595/1‑93 (MQ=255)
atatCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATAc < 1:3342674/93‑1 (MQ=255)
tatCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACa < 1:1977348/93‑1 (MQ=255)
tatCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACa < 2:2118442/93‑1 (MQ=255)
tCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAgg > 1:193247/1‑93 (MQ=255)
gCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGaaa > 1:3126329/1‑93 (MQ=255)
|
GACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCATCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAA > NC_000913/3486571‑3486750
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCATCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAATC > NC_000913/3486568‑3486752
|
TCCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCAC < SRR4302535.1028636/94‑1 (MQ=60)
CCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACC > SRR4302535.3076595/1‑94 (MQ=60)
CGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCT < SRR4302535.3265169/94‑1 (MQ=60)
CGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCT > SRR4302535.947763/1‑94 (MQ=60)
CGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCT < SRR4302535.888718/94‑1 (MQ=60)
CGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCT > SRR4302535.446120/1‑94 (MQ=60)
CGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCT < SRR4302535.4412294/94‑1 (MQ=60)
CGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCT > SRR4302535.4054159/1‑94 (MQ=60)
CGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCT > SRR4302535.391950/1‑94 (MQ=60)
CGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCT > SRR4302535.3221528/1‑94 (MQ=60)
CGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCT > SRR4302535.1285273/1‑94 (MQ=60)
GACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTT > SRR4302535.3096096/1‑94 (MQ=60)
ACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTC > SRR4302535.1189776/1‑94 (MQ=60)
CATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCGCCTTCC > SRR4302535.2587453/1‑94 (MQ=60)
CATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCC > SRR4302535.4320959/1‑94 (MQ=60)
ATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCA > SRR4302535.3883473/1‑94 (MQ=60)
ATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCA > SRR4302535.4113994/1‑94 (MQ=60)
CTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACC > SRR4302535.3009064/1‑94 (MQ=60)
CTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACC > SRR4302535.3619319/1‑94 (MQ=60)
TTGCCTGATGCTTCGTATTTACGCCCCAACCCCCTTCGCCACCGCGTGTGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACC < SRR4302535.2799716/94‑1 (MQ=60)
TGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCA > SRR4302535.2584386/1‑94 (MQ=60)
CTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCG < SRR4302535.3051523/94‑1 (MQ=60)
CTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCG < SRR4302535.87501/94‑1 (MQ=60)
CTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCG < SRR4302535.1577499/94‑1 (MQ=60)
CTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCG > SRR4302535.1841826/1‑94 (MQ=60)
CTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCG < SRR4302535.4300743/94‑1 (MQ=60)
TGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGA > SRR4302535.3286344/1‑94 (MQ=60)
TGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGA < SRR4302535.2441223/94‑1 (MQ=60)
GATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGAC > SRR4302535.404257/1‑94 (MQ=60)
GATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGAC > SRR4302535.3560241/1‑94 (MQ=60)
ATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACG < SRR4302535.379615/94‑1 (MQ=60)
ATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACG > SRR4302535.73933/1‑94 (MQ=60)
TGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGG < SRR4302535.3397739/94‑1 (MQ=60)
TGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGG > SRR4302535.702853/1‑94 (MQ=60)
GCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGT < SRR4302535.224709/94‑1 (MQ=60)
CGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAA > SRR4302535.105073/1‑94 (MQ=60)
CGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAA > SRR4302535.4220193/1‑94 (MQ=60)
GTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAA > SRR4302535.4619691/1‑94 (MQ=60)
GTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAA > SRR4302535.1454386/1‑94 (MQ=60)
GTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAA > SRR4302535.1750098/1‑94 (MQ=60)
GTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAA > SRR4302535.4662350/1‑94 (MQ=60)
GTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAA > SRR4302535.2272647/1‑94 (MQ=60)
GTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAA > SRR4302535.818579/1‑94 (MQ=60)
ATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAAC > SRR4302535.722546/1‑94 (MQ=60)
ATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAAC > SRR4302535.3981653/1‑94 (MQ=60)
TTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACG < SRR4302535.1686446/94‑1 (MQ=60)
TTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGC < SRR4302535.3609403/94‑1 (MQ=60)
ACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCAT < SRR4302535.873211/94‑1 (MQ=60)
CGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATC > SRR4302535.918336/1‑94 (MQ=60)
CCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCAC > SRR4302535.1857512/1‑94 (MQ=60)
CCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCAC > SRR4302535.3778199/1‑94 (MQ=60)
CCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAT > SRR4302535.2146007/1‑94 (MQ=60)
CAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATC > SRR4302535.3246932/1‑94 (MQ=60)
AACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCC > SRR4302535.1040390/1‑94 (MQ=60)
AACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCC < SRR4302535.4091047/94‑1 (MQ=60)
ACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCG < SRR4302535.1532728/94‑1 (MQ=60)
ACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCG < SRR4302535.1174024/94‑1 (MQ=60)
CCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGC > SRR4302535.17617/1‑94 (MQ=60)
CACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGT < SRR4302535.1651469/94‑1 (MQ=60)
CCCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTC < SRR4302535.151545/94‑1 (MQ=60)
ACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTC > SRR4302535.656890/1‑94 (MQ=60)
CCTTCGCCGCCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCGCCAGCGACGGTGCAAAACGCATCACATCCGGTCC < SRR4302535.4468132/94‑1 (MQ=60)
CCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCC > SRR4302535.385712/1‑94 (MQ=60)
CCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCC > SRR4302535.122020/1‑94 (MQ=60)
CTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCG > SRR4302535.1135443/1‑94 (MQ=60)
CTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCG > SRR4302535.1191056/1‑94 (MQ=60)
TTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGG < SRR4302535.668188/94‑1 (MQ=60)
GCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAT > SRR4302535.480469/1‑94 (MQ=60)
CACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTC > SRR4302535.1659002/1‑94 (MQ=60)
CACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTC > SRR4302535.3782501/1‑94 (MQ=60)
CACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTC > SRR4302535.3334126/1‑94 (MQ=60)
CACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTC > SRR4302535.1818815/1‑94 (MQ=60)
CACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTC < SRR4302535.418144/94‑1 (MQ=60)
CACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTC < SRR4302535.1964742/94‑1 (MQ=60)
CGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGCCGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGC > SRR4302535.1066560/1‑94 (MQ=60)
CGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCTGGCATTCAGC < SRR4302535.3443175/94‑1 (MQ=60)
CGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGC > SRR4302535.2372247/1‑94 (MQ=60)
CGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGC < SRR4302535.1795094/94‑1 (MQ=60)
GCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCA < SRR4302535.2156960/94‑1 (MQ=60)
CGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTAC > SRR4302535.2996729/1‑94 (MQ=60)
GAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACG < SRR4302535.2536020/94‑1 (MQ=60)
AACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCC < SRR4302535.735009/94‑1 (MQ=60)
ACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCA < SRR4302535.3467419/94‑1 (MQ=60)
ACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCA > SRR4302535.2747382/1‑94 (MQ=60)
CGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAG > SRR4302535.909125/1‑94 (MQ=60)
GTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGC > SRR4302535.1613300/1‑94 (MQ=60)
TGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCT > SRR4302535.2220014/1‑94 (MQ=60)
TGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCT < SRR4302535.2037895/94‑1 (MQ=60)
GCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTC > SRR4302535.4166553/1‑94 (MQ=60)
ATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTG > SRR4302535.4068414/1‑94 (MQ=60)
CCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGC > SRR4302535.600551/1‑94 (MQ=60)
CCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGC > SRR4302535.3029748/1‑94 (MQ=60)
CTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCC > SRR4302535.1568625/1‑94 (MQ=60)
CTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCC > SRR4302535.592935/1‑94 (MQ=60)
CTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCC > SRR4302535.3547020/1‑94 (MQ=60)
TCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCAT < SRR4302535.609670/94‑1 (MQ=60)
CGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATA > SRR4302535.4519004/1‑94 (MQ=60)
CGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATA > SRR4302535.4586771/1‑94 (MQ=60)
ATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACA < SRR4302535.3365966/94‑1 (MQ=60)
TATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAG < SRR4302535.1991591/94‑1 (MQ=60)
ATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGG > SRR4302535.194578/1‑94 (MQ=60)
ATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGG < SRR4302535.1815704/94‑1 (MQ=60)
TCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGA < SRR4302535.4428574/94‑1 (MQ=60)
CGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAA > SRR4302535.3148103/1‑94 (MQ=60)
CACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAATC > SRR4302535.280562/1‑94 (MQ=60)
|
TCCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCATCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAATC > NC_000913/3486568‑3486752
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
