Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,486,661 |
T→C |
D386G (GAT→GGT) |
argD ← |
acetylornithine delta‑aminotransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,486,661 | 0 | T | C | 99.7%
| 1012.3
/ ‑5.1
| 324 | D386G (GAT→GGT) | argD | acetylornithine delta‑aminotransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (176/147); total (176/148) |
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 |
Only 100 of 335 total aligned reads displayed.
GACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCATCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAA > NC_000913/3486571‑3486750
|
gACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCt > 2:1212001/1‑93 (MQ=255)
aCATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCtt < 1:5645240/93‑1 (MQ=255)
cATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTc > 2:4431741/1‑93 (MQ=255)
aTCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTcc < 1:6291227/93‑1 (MQ=255)
tCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTcca > 2:6880995/1‑93 (MQ=255)
tCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTcca > 2:135424/1‑93 (MQ=255)
tCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTcca < 1:4612176/93‑1 (MQ=255)
ttttGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccacc > 2:7694277/1‑93 (MQ=255)
ttttGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccacc > 1:3921454/1‑93 (MQ=255)
ttttGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccacc > 2:5727034/1‑93 (MQ=255)
tGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccaccacc < 1:6832327/93‑1 (MQ=255)
gCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTccaccacca < 2:345949/93‑1 (MQ=255)
ccTGATGCTTCGGATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCAGCCCTTCATCGATATCCGCACCTTCCACCACCAg > 2:7020637/1‑93 (MQ=255)
cTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGc < 2:2337335/93‑1 (MQ=255)
tGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCg > 1:1513602/1‑93 (MQ=255)
gATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGa < 2:5537135/93‑1 (MQ=255)
gATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGa > 2:6384944/1‑93 (MQ=255)
gATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGa < 1:1973260/93‑1 (MQ=255)
aTGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGAc < 1:526130/93‑1 (MQ=255)
ttCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTg > 1:210443/1‑93 (MQ=255)
tCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGc > 2:4157775/1‑93 (MQ=255)
cGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCa > 2:3564747/1‑93 (MQ=255)
gTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaa > 1:6473746/1‑93 (MQ=255)
gTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaa > 1:370330/1‑93 (MQ=255)
tATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaaa < 1:2454621/93‑1 (MQ=255)
aTTTACGCCCCACCCACCTCCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCaaaa < 2:18203/93‑1 (MQ=255)
tttACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGCCGGTGCAacac > 2:224801/1‑93 (MQ=255)
tttACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAAc > 2:3851884/1‑93 (MQ=255)
aCGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCa > 2:6065769/1‑93 (MQ=255)
aCGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCa < 1:998843/93‑1 (MQ=255)
aCGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCa < 2:3946344/93‑1 (MQ=255)
cGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCAt < 1:5386959/93‑1 (MQ=255)
cGCCCCAACCACCTTCGCCACAGCGTGGTCGAAACGTTGCATGCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGATGCAAAATGCAt > 2:2870499/1‑93 (MQ=255)
gCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATc < 1:7414183/93‑1 (MQ=255)
ccccAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATca > 2:5071983/1‑93 (MQ=255)
ccccAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATca > 1:7332631/1‑93 (MQ=255)
cccAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATcac < 1:7806272/93‑1 (MQ=255)
cccAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATcac < 1:7634877/93‑1 (MQ=255)
ccAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATcaca < 1:2686819/93‑1 (MQ=255)
cAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAt > 1:1179226/1‑93 (MQ=255)
aaCCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtc < 1:5461781/93‑1 (MQ=255)
aaCCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtc < 1:4991047/93‑1 (MQ=255)
accaccTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtcc < 1:4258879/93‑1 (MQ=255)
accaccTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtcc < 1:2619721/93‑1 (MQ=255)
caccTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccgg < 1:1013135/93‑1 (MQ=255)
accTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggt > 2:4806111/1‑93 (MQ=255)
accTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggt > 1:3097922/1‑93 (MQ=255)
accTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggt > 1:1806988/1‑93 (MQ=255)
cTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggtcc > 2:2218150/1‑93 (MQ=255)
ttCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAtccggtccg > 2:423599/1‑93 (MQ=255)
cGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGc < 1:7155790/93‑1 (MQ=255)
cGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGc < 2:778888/93‑1 (MQ=255)
cGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGc < 1:3330519/93‑1 (MQ=255)
ccACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAt > 1:2828851/1‑93 (MQ=255)
ccACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAt < 2:1547628/93‑1 (MQ=255)
ccACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAt > 1:6359985/1‑93 (MQ=255)
cACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAtt < 1:2994651/93‑1 (MQ=255)
aCCGCGTGGGGGAAACGTTGCATCCCTTCATCGATATCAGCACCTTCCACCACGAGCGACGGTGCAGAACGCATCACATCCGGTGCGGCAttg > 2:391100/1‑92 (MQ=255)
aCCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTc > 2:4321599/1‑93 (MQ=255)
cgcgTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAg < 2:3288889/93‑1 (MQ=255)
cgTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCa < 2:2437852/93‑1 (MQ=255)
gTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCAc > 1:4791768/1‑93 (MQ=255)
ggCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCAt < 1:579939/93‑1 (MQ=255)
aaaCGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACg > 2:5446671/1‑93 (MQ=255)
aaCGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGc > 2:2974338/1‑93 (MQ=255)
aaCGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGc > 2:7535272/1‑93 (MQ=255)
cGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCa > 2:4545650/1‑93 (MQ=255)
ttGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGc > 2:4940601/1‑93 (MQ=255)
tGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGcc < 1:4512248/93‑1 (MQ=255)
cATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCctc < 1:2168111/93‑1 (MQ=255)
cATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCctc < 1:6614701/93‑1 (MQ=255)
ctCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCctct < 2:3703185/92‑1 (MQ=255)
tCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTg > 1:1614431/1‑93 (MQ=255)
tCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTg > 2:3178587/1‑93 (MQ=255)
tCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTg > 1:6899695/1‑93 (MQ=255)
tCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTg > 2:1858574/1‑93 (MQ=255)
cccTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTgc < 1:7758013/93‑1 (MQ=255)
cTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTgcgc > 2:7176436/1‑93 (MQ=255)
ttCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGcc > 1:5831712/1‑93 (MQ=255)
ttCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGcc > 1:7587921/1‑93 (MQ=255)
ttCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGcc > 2:1513676/1‑93 (MQ=255)
ttCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGcc > 2:2011386/1‑93 (MQ=255)
tCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGccc > 2:4692872/1‑93 (MQ=255)
tCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCa < 2:7363826/93‑1 (MQ=255)
tCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCa < 2:7910458/93‑1 (MQ=255)
tCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCa > 1:3320528/1‑93 (MQ=255)
tCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCa < 1:3480879/93‑1 (MQ=255)
tCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCa > 1:6532447/1‑93 (MQ=255)
tCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCa > 1:752481/1‑93 (MQ=255)
cGATATCCGCGCCTTCCACCACCAGCGGCGATGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCAt < 2:7241194/93‑1 (MQ=255)
gATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATa > 2:3074386/1‑93 (MQ=255)
gATATCCGCACCTTCAACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATa < 1:7023419/93‑1 (MQ=255)
atatCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATAc < 2:1634720/93‑1 (MQ=255)
tatCCGCACCTTCCACCACCANCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACa < 1:61757/93‑1 (MQ=255)
tatCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACa > 2:5292123/1‑93 (MQ=255)
tatCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACa < 2:4052362/93‑1 (MQ=255)
atCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAg < 1:1313015/93‑1 (MQ=255)
atCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAg > 1:6793286/1‑93 (MQ=255)
tCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAgg > 1:4133119/1‑93 (MQ=255)
gCACCTTCCACCACCAGCGACGGTGCAAAACGAATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGaaa > 2:6588823/1‑93 (MQ=255)
|
GACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCATCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAA > NC_000913/3486571‑3486750
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCATCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAATCAC > NC_000913/3486568‑3486754
|
TCCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCAC > SRR4302543.2020010/1‑94 (MQ=60)
TCCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCAC > SRR4302543.4402488/1‑94 (MQ=60)
TCCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCAC > SRR4302543.555447/1‑94 (MQ=60)
CCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACC > SRR4302543.3348586/1‑94 (MQ=60)
GACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTT < SRR4302543.3634505/94‑1 (MQ=60)
GACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTT > SRR4302543.1540700/1‑94 (MQ=60)
ACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTC < SRR4302543.5696699/94‑1 (MQ=60)
ACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTC > SRR4302543.7794472/1‑94 (MQ=60)
ACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCACCGATATCCGCACCTTC > SRR4302543.1147234/1‑94 (MQ=60)
CATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCCCCTTCC > SRR4302543.6311784/1‑94 (MQ=60)
CATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCC < SRR4302543.4587390/94‑1 (MQ=60)
CATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCC < SRR4302543.6916091/94‑1 (MQ=60)
CATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCC > SRR4302543.308589/1‑94 (MQ=60)
CATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCC < SRR4302543.4647217/94‑1 (MQ=60)
CATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCC > SRR4302543.5814660/1‑94 (MQ=60)
ATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCA > SRR4302543.2479515/1‑94 (MQ=60)
ATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCA > SRR4302543.5283187/1‑94 (MQ=60)
ATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCA < SRR4302543.6350461/94‑1 (MQ=60)
ATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCA > SRR4302543.527391/1‑94 (MQ=60)
ATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCA > SRR4302543.7429008/1‑94 (MQ=60)
ATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCA > SRR4302543.639154/1‑94 (MQ=60)
ATCTTTTGCCAGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCA > SRR4302543.7870175/1‑94 (MQ=60)
TCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCCCCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCAC < SRR4302543.2386800/94‑1 (MQ=60)
TCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCAC < SRR4302543.4654071/94‑1 (MQ=60)
TCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCAC > SRR4302543.5493113/1‑94 (MQ=60)
CTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACC > SRR4302543.3956061/1‑94 (MQ=60)
CTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACC > SRR4302543.3847965/1‑94 (MQ=60)
TTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCA > SRR4302543.237361/1‑94 (MQ=60)
TGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCA < SRR4302543.6896828/94‑1 (MQ=60)
GCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAG < SRR4302543.517881/94‑1 (MQ=60)
CTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCG > SRR4302543.1527195/1‑94 (MQ=60)
CTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCAGCACCTTCCACCACCAGCG > SRR4302543.5465084/1‑94 (MQ=60)
TGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGA > SRR4302543.4013363/1‑94 (MQ=60)
TGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGA > SRR4302543.5852494/1‑94 (MQ=60)
GATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGAC < SRR4302543.1990951/94‑1 (MQ=60)
ATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACG < SRR4302543.530995/94‑1 (MQ=60)
ATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACG < SRR4302543.7864075/94‑1 (MQ=60)
GCTTCGTATTTACGCCCCAACCGCCTTCGCCACCGCGTGGGCGAAACGTTCCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGT < SRR4302543.948925/94‑1 (MQ=60)
CTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTG < SRR4302543.2343322/94‑1 (MQ=60)
CTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTG > SRR4302543.212237/1‑94 (MQ=60)
TCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTACA < SRR4302543.6547757/94‑1 (MQ=60)
CGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAA > SRR4302543.7651335/1‑94 (MQ=60)
CGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAA > SRR4302543.6520015/1‑94 (MQ=60)
CGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAA > SRR4302543.6534731/1‑94 (MQ=60)
CGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAA > SRR4302543.1627858/1‑94 (MQ=60)
CGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAA > SRR4302543.373738/1‑94 (MQ=60)
GTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAA > SRR4302543.560149/1‑94 (MQ=60)
GTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAA < SRR4302543.564361/94‑1 (MQ=60)
TATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAA < SRR4302543.2476762/94‑1 (MQ=60)
TTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACG < SRR4302543.6654477/94‑1 (MQ=60)
TTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACG < SRR4302543.4055682/94‑1 (MQ=60)
TACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCA > SRR4302543.3191153/1‑94 (MQ=60)
ACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCAT < SRR4302543.1323989/94‑1 (MQ=60)
ACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCAT < SRR4302543.7992689/94‑1 (MQ=60)
ACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCAT < SRR4302543.1007669/94‑1 (MQ=60)
CGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATC < SRR4302543.5435893/94‑1 (MQ=60)
GCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCA < SRR4302543.163399/94‑1 (MQ=60)
GCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCA < SRR4302543.7485314/94‑1 (MQ=60)
GCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCA > SRR4302543.7403193/1‑94 (MQ=60)
GCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCA > SRR4302543.2834630/1‑94 (MQ=60)
CCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCAC > SRR4302543.7640208/1‑94 (MQ=60)
CCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCAC > SRR4302543.173002/1‑94 (MQ=60)
CCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCAC < SRR4302543.6702409/94‑1 (MQ=60)
CCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCAC < SRR4302543.3915429/94‑1 (MQ=60)
CCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGTATCACA < SRR4302543.3714197/94‑1 (MQ=60)
CCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACA < SRR4302543.4204585/94‑1 (MQ=60)
CCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACA < SRR4302543.7707317/94‑1 (MQ=60)
CCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACA < SRR4302543.7879857/94‑1 (MQ=60)
CCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACA > SRR4302543.7401811/1‑94 (MQ=60)
CCCAACCACCTTCGCCACCGCGTGGGCGAAAAGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAAAGCATCACA > SRR4302543.7595376/1‑94 (MQ=60)
CCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAT > SRR4302543.1189895/1‑94 (MQ=60)
CCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAT < SRR4302543.4597442/94‑1 (MQ=60)
CCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAT < SRR4302543.7039590/94‑1 (MQ=60)
CCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACAT < SRR4302543.2711179/94‑1 (MQ=60)
AACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCC < SRR4302543.5036481/94‑1 (MQ=60)
AACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCC < SRR4302543.5511279/94‑1 (MQ=60)
ACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCG < SRR4302543.4297549/94‑1 (MQ=60)
ACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCG < SRR4302543.2643461/94‑1 (MQ=60)
ACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCG > SRR4302543.2563694/1‑94 (MQ=60)
CCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCATATCCGG > SRR4302543.6741372/1‑94 (MQ=60)
CCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGG < SRR4302543.7404955/94‑1 (MQ=60)
CCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGG > SRR4302543.1340088/1‑94 (MQ=60)
CACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGT < SRR4302543.5958072/94‑1 (MQ=60)
CACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGT > SRR4302543.6890367/1‑94 (MQ=60)
CACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGT < SRR4302543.1022102/94‑1 (MQ=60)
CACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGT > SRR4302543.3125785/1‑94 (MQ=60)
CACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGT > SRR4302543.1823163/1‑94 (MQ=60)
CACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGC > SRR4302543.5859084/1‑94 (MQ=60)
ACCTTCGCCACCGCGTGGGCGAAACGTTGCTTCCCTTCATCGATATCCGCACCTTCCACCTCCAGCGACGTTGCAAAATGCATCACATCCGGTC > SRR4302543.7072203/1‑94 (MQ=60)
ACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAACCGCATCCCATCCGGTC > SRR4302543.6894321/1‑94 (MQ=60)
ACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTC > SRR4302543.2696309/1‑94 (MQ=60)
CCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCC > SRR4302543.6447718/1‑94 (MQ=60)
CCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCC < SRR4302543.5617701/94‑1 (MQ=60)
CTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCG > SRR4302543.5329762/1‑94 (MQ=60)
CTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCG > SRR4302543.1442999/1‑94 (MQ=60)
TTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGG > SRR4302543.198608/1‑94 (MQ=60)
CTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGG < SRR4302543.2113244/94‑1 (MQ=60)
CGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCA < SRR4302543.3360552/94‑1 (MQ=60)
CGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCA < SRR4302543.7225338/94‑1 (MQ=60)
CGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCA < SRR4302543.7115984/94‑1 (MQ=60)
GCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAT > SRR4302543.6419787/1‑94 (MQ=60)
GCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCAT > SRR4302543.2854728/1‑94 (MQ=60)
CCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATT < SRR4302543.3704339/94‑1 (MQ=60)
CACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTC < SRR4302543.7278818/94‑1 (MQ=60)
CACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTC < SRR4302543.3021827/94‑1 (MQ=60)
ACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCA < SRR4302543.6934332/94‑1 (MQ=60)
CCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAG > SRR4302543.7698759/1‑94 (MQ=60)
CGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCAC > SRR4302543.4835566/1‑94 (MQ=60)
CGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCAC < SRR4302543.335632/94‑1 (MQ=60)
GTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACC > SRR4302543.1902680/1‑94 (MQ=60)
agaGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCA < SRR4302543.4420110/91‑1 (MQ=60)
GGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCAT > SRR4302543.6727944/1‑94 (MQ=60)
GGGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCAT < SRR4302543.6024441/94‑1 (MQ=60)
GGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATT < SRR4302543.585237/94‑1 (MQ=60)
GGCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATT < SRR4302543.7552555/94‑1 (MQ=60)
GCGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTA < SRR4302543.7620017/94‑1 (MQ=60)
GCGAAACGTTGCATCCCTCCATCGATATCCGCCCCTTCCACCCCCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTA < SRR4302543.6440747/94‑1 (MQ=60)
CGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTAC < SRR4302543.6654253/94‑1 (MQ=60)
CGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTAC < SRR4302543.2072241/94‑1 (MQ=60)
CGAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTAC > SRR4302543.3120952/1‑94 (MQ=60)
GAAACGTTGCATCCCTTCATCGATATCCGCATCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACG < SRR4302543.3439945/94‑1 (MQ=60)
GAAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACG > SRR4302543.7729793/1‑94 (MQ=60)
AAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGC > SRR4302543.1892302/1‑94 (MQ=60)
AAACGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGC > SRR4302543.6956409/1‑94 (MQ=60)
ACGTTGCATCCCTTCATCGATATCCGCACCTCCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCA < SRR4302543.2845067/94‑1 (MQ=60)
CGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAG > SRR4302543.7869304/1‑94 (MQ=60)
CGTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAG < SRR4302543.73521/94‑1 (MQ=60)
GTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGC > SRR4302543.6359916/1‑94 (MQ=60)
GTTGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGC > SRR4302543.4435290/1‑94 (MQ=60)
TGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCT < SRR4302543.1469723/94‑1 (MQ=60)
TGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCT < SRR4302543.4553280/94‑1 (MQ=60)
TGCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCT < SRR4302543.425680/94‑1 (MQ=60)
GCATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTC > SRR4302543.7189236/1‑94 (MQ=60)
CATCCCTTCATCGATATCCGCCCCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCT < SRR4302543.3271184/94‑1 (MQ=60)
CATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCT < SRR4302543.1054507/94‑1 (MQ=60)
CATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCT < SRR4302543.2187538/94‑1 (MQ=60)
CATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCT < SRR4302543.6677066/94‑1 (MQ=60)
ATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTG > SRR4302543.6964534/1‑94 (MQ=60)
ATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTG > SRR4302543.1628826/1‑94 (MQ=60)
ATCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTG < SRR4302543.131229/94‑1 (MQ=60)
TCCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGC > SRR4302543.3292996/1‑94 (MQ=60)
CCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCG < SRR4302543.7831235/94‑1 (MQ=60)
CCCTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCG > SRR4302543.2681579/1‑94 (MQ=60)
CTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCC > SRR4302543.5825255/1‑94 (MQ=60)
CTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCC > SRR4302543.7660023/1‑94 (MQ=60)
CTTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCC > SRR4302543.5884752/1‑94 (MQ=60)
TTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCC < SRR4302543.3355300/94‑1 (MQ=60)
TTCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCC > SRR4302543.2180830/1‑94 (MQ=60)
TCATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCG < SRR4302543.7692739/94‑1 (MQ=60)
ATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCA > SRR4302543.6593947/1‑94 (MQ=60)
ATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCA > SRR4302543.759147/1‑94 (MQ=60)
ATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCA > SRR4302543.4925924/1‑94 (MQ=60)
ATCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCA > SRR4302543.3350489/1‑94 (MQ=60)
TCGATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCAT < SRR4302543.3512056/94‑1 (MQ=60)
GATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATAC > SRR4302543.6048223/1‑94 (MQ=60)
GATATCCGCACCTTCAACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATAC < SRR4302543.7090730/94‑1 (MQ=60)
ATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACA > SRR4302543.4809955/1‑94 (MQ=60)
ATATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACA > SRR4302543.4826927/1‑94 (MQ=60)
TATCCGCACCTTCCACCACCANCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAG < SRR4302543.62299/94‑1 (MQ=60)
TATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAG < SRR4302543.4913717/94‑1 (MQ=60)
TATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAG > SRR4302543.3016295/1‑94 (MQ=60)
TATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAG < SRR4302543.6591547/94‑1 (MQ=60)
TATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAG < SRR4302543.2793703/94‑1 (MQ=60)
TATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAG > SRR4302543.6857436/1‑94 (MQ=60)
ATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGG < SRR4302543.1324684/94‑1 (MQ=60)
ATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGG > SRR4302543.5410925/1‑94 (MQ=60)
ATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGG > SRR4302543.4170411/1‑94 (MQ=60)
ATCCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGG < SRR4302543.2888164/94‑1 (MQ=60)
ATCCGCACCTGCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGG < SRR4302543.6294111/94‑1 (MQ=60)
CCGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAA > SRR4302543.2156237/1‑94 (MQ=60)
CGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAA > SRR4302543.3981229/1‑94 (MQ=60)
CGCACCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAA > SRR4302543.3462184/1‑94 (MQ=60)
CCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAATCAC > SRR4302543.5421581/1‑94 (MQ=60)
CCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAATCAC < SRR4302543.198515/94‑1 (MQ=60)
CCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAATCAC < SRR4302543.6652314/94‑1 (MQ=60)
CCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAATCAC < SRR4302543.3298052/94‑1 (MQ=60)
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TCCGACATCTTTTGCCTGATGCTTCGTATTTACGCCCCAACCACCTTCGCCACCGCGTGGGCGAAACGTTGCATCCCTTCATCGATATCCGCATCTTCCACCACCAGCGACGGTGCAAAACGCATCACATCCGGTCCGGCATTCAGCACCATTACGCCAGCCTCTGCGCCCGCATACAGGAAATCAC > NC_000913/3486568‑3486754
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
