Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,574,513 |
T→C |
intergenic (+1216/+184) |
yhgN → / ← gntK |
hypothetical protein/gluconokinase 2 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,574,513 | 0 | T | C | 99.0%
| 606.1
/ ‑3.9
| 199 | intergenic (+1216/+184) | yhgN/gntK | hypothetical protein/gluconokinase 2 |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (99/98); total (100/99) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 |
Only 100 of 210 total aligned reads displayed.
CGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG > NC_000913/3574426‑3574602
|
cGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTc > 2:1399395/1‑93 (MQ=255)
ggCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTcc > 1:808825/1‑93 (MQ=255)
gCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTccc > 1:4106937/1‑93 (MQ=255)
gCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTccc < 1:363208/93‑1 (MQ=255)
tGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCt > 2:1008734/1‑93 (MQ=255)
tGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCt > 1:2430700/1‑93 (MQ=255)
gATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCtt < 1:2813300/93‑1 (MQ=255)
aTCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGCCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCttt < 1:3113560/93‑1 (MQ=255)
aTCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCttt < 1:3702445/93‑1 (MQ=255)
cGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCttttt > 2:881948/1‑93 (MQ=255)
tGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAt < 1:1813396/93‑1 (MQ=255)
tcgcCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtc < 1:2856123/92‑1 (MQ=255)
tcgcCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtc < 1:3609621/92‑1 (MQ=255)
cgcCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtcg > 2:3297232/1‑93 (MQ=255)
cgcCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtcg < 1:123333/93‑1 (MQ=255)
ctggTTTCATCTAAGATCTTGTCAAACATAGCTCCCAGGGCGACAACCATAGCCAGAGAGCCGCGGGCGCCTTCCATCCCTTTCTCCAtcgtc > 2:722586/3‑93 (MQ=255)
ccGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtcgtc > 2:853883/1‑93 (MQ=255)
ggTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGc < 1:963581/93‑1 (MQ=255)
gTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCt > 1:4639952/1‑93 (MQ=255)
gTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCt < 2:1385363/93‑1 (MQ=255)
cATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGa < 2:2410842/93‑1 (MQ=255)
tGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtt < 2:1278643/93‑1 (MQ=255)
tGTAAGATCTTGCCAAACATAGCGCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtt < 2:180503/93‑1 (MQ=255)
gTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATAGTCGCTGCGAttt > 2:3894735/1‑93 (MQ=255)
tAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtttt > 2:3666353/1‑93 (MQ=255)
aaGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTa < 1:1375986/93‑1 (MQ=255)
gATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATc > 2:1321957/1‑93 (MQ=255)
aTCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCg < 1:1003739/93‑1 (MQ=255)
aTCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCg < 2:2838285/93‑1 (MQ=255)
aTCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCg > 2:3823573/1‑93 (MQ=255)
tCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGa > 1:2204537/1‑93 (MQ=255)
tCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGa > 1:1459148/1‑93 (MQ=255)
cTTTCCAAACATCGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAg < 2:518948/93‑1 (MQ=255)
ttGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGc < 2:3724263/93‑1 (MQ=255)
cAAGCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCCCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCa < 2:1675612/93‑1 (MQ=255)
cAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCa < 2:2929295/93‑1 (MQ=255)
aaaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt < 1:4075025/93‑1 (MQ=255)
aaaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt < 1:3045326/93‑1 (MQ=255)
aaCCTAGCTCCCAGGCCAACAACCGCCGCAAGGAAGCCGAGGGCGCCTCCCATCCCTTTTCCCATCGTCGCTGCGATTTTATCGAGCGGCATa < 2:537387/93‑1 (MQ=255)
aaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATa < 2:122124/93‑1 (MQ=255)
aaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATa > 2:3266043/1‑93 (MQ=255)
aaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATa > 1:1154614/1‑93 (MQ=255)
aCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAc > 1:932462/1‑93 (MQ=255)
aCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAc < 2:320725/93‑1 (MQ=255)
aCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAc < 2:2026527/93‑1 (MQ=255)
aCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAc < 1:1259353/93‑1 (MQ=255)
aCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAc > 1:191910/1‑93 (MQ=255)
aCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAc < 1:3750168/93‑1 (MQ=255)
cATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAcc > 1:564117/1‑93 (MQ=255)
cATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAcc > 1:1662225/1‑93 (MQ=255)
aTAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCa < 2:2733694/93‑1 (MQ=255)
aGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGa < 1:2899629/93‑1 (MQ=255)
cTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGaaa > 1:3222207/1‑93 (MQ=255)
tCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGaaaa < 1:1289250/93‑1 (MQ=255)
tCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGAGCCTCCCATCCCTTTTTCCATCATCGCTGCGATTTTCTTGAGCGGAATACCAGaaaa > 2:3596392/1‑93 (MQ=255)
cccAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGaaaaa < 2:1992629/93‑1 (MQ=255)
cAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAg < 1:4291737/93‑1 (MQ=255)
cAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAg > 1:1572984/1‑93 (MQ=255)
cAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAg > 2:4357845/1‑93 (MQ=255)
cAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAg > 2:4522487/1‑93 (MQ=255)
cAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAg < 1:650109/93‑1 (MQ=255)
aGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAgg < 1:438726/93‑1 (MQ=255)
gggCGACACCCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc < 2:1721842/93‑1 (MQ=255)
gggCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc > 1:1524832/1‑93 (MQ=255)
gCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCa < 2:2320808/93‑1 (MQ=255)
cGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAg < 1:3875592/93‑1 (MQ=255)
gACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGc < 1:2507093/93‑1 (MQ=255)
gACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGc < 2:507815/93‑1 (MQ=255)
aCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGcc < 2:1732683/93‑1 (MQ=255)
cAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGccc > 2:4487133/1‑93 (MQ=255)
aaCCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGcccc > 2:393144/1‑93 (MQ=255)
accaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGccccc > 1:1956218/1‑93 (MQ=255)
accaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGccccc > 1:365716/1‑93 (MQ=255)
ccaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCa > 2:4256450/1‑93 (MQ=255)
ccaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCa < 2:4046943/93‑1 (MQ=255)
ccaccGCCAGGAAGCAGAGGGCGCCTCCCATCCCTTTGTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCa < 1:1858197/93‑1 (MQ=255)
caccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCAt < 1:3016382/93‑1 (MQ=255)
cccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATg < 2:1592654/92‑1 (MQ=255)
accGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATTGAGCGGCATACCAGAAAACAGGCCAGCCCCCATg > 1:4342548/1‑93 (MQ=255)
accGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATg < 1:108044/93‑1 (MQ=255)
accGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATg > 2:1976377/1‑93 (MQ=255)
accGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATg > 1:2719180/1‑93 (MQ=255)
aGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCCTGGAcacc > 1:329448/1‑93 (MQ=255)
aGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacc > 2:2679376/1‑93 (MQ=255)
aGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacc > 2:4203117/1‑93 (MQ=255)
aGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacc > 2:3092831/1‑93 (MQ=255)
ggAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacca < 1:3794988/93‑1 (MQ=255)
gAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcaccac < 2:3430031/93‑1 (MQ=255)
gCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCAt > 1:4485390/1‑93 (MQ=255)
gCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCAt > 2:4283764/1‑93 (MQ=255)
ccGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGCCACCACCAta > 1:3661715/1‑92 (MQ=255)
ccGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCAtt < 1:352361/93‑1 (MQ=255)
gAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaa > 2:220608/1‑93 (MQ=255)
aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa < 1:679523/93‑1 (MQ=255)
aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa < 1:2472052/93‑1 (MQ=255)
aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa > 2:211533/1‑93 (MQ=255)
aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa < 1:4455517/93‑1 (MQ=255)
aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa > 1:2040444/1‑93 (MQ=255)
gggCGCCTCCCATCCCTTTTTTCATCCTCGCTGCGCTTTTATCGAGCGGCATACCCGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaac > 2:1778641/1‑92 (MQ=255)
gggCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAg > 2:850286/1‑93 (MQ=255)
|
CGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG > NC_000913/3574426‑3574602
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCAG > NC_000913/3574420‑3574606
|
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGC < SRR4302535.1717250/94‑1 (MQ=60)
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGC > SRR4302535.2519075/1‑94 (MQ=60)
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGC < SRR4302535.2248912/94‑1 (MQ=60)
TTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCG > SRR4302535.4128893/1‑94 (MQ=60)
CGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCC > SRR4302535.814486/1‑94 (MQ=60)
GGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCC > SRR4302535.4135057/1‑94 (MQ=60)
GCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCA < SRR4302535.365710/94‑1 (MQ=60)
AATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATC > SRR4302535.1608793/1‑94 (MQ=60)
AATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATC < SRR4302535.1414415/94‑1 (MQ=60)
TCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCC > SRR4302535.481268/1‑94 (MQ=60)
CTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCT > SRR4302535.1292912/1‑94 (MQ=60)
CTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCT > SRR4302535.2448212/1‑94 (MQ=60)
CTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCT < SRR4302535.2624529/94‑1 (MQ=60)
GATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTT < SRR4302535.2833294/94‑1 (MQ=60)
ATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGCCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTT < SRR4302535.3135234/94‑1 (MQ=60)
ATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTT > SRR4302535.3598612/1‑94 (MQ=60)
ATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTT < SRR4302535.3728087/94‑1 (MQ=60)
TCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGTGCGCCTCCCATCCCTTTTT < SRR4302535.1565374/94‑1 (MQ=60)
TCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTT < SRR4302535.975419/94‑1 (MQ=60)
ACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCA < SRR4302535.3269864/94‑1 (MQ=60)
TGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATC < SRR4302535.1826508/94‑1 (MQ=60)
TCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCG < SRR4302535.2876361/94‑1 (MQ=60)
TCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCG < SRR4302535.669067/94‑1 (MQ=60)
TCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCG < SRR4302535.3634657/94‑1 (MQ=60)
GCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCG < SRR4302535.3379531/94‑1 (MQ=60)
GCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCG < SRR4302535.2197743/94‑1 (MQ=60)
CGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGT < SRR4302535.124200/94‑1 (MQ=60)
GCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTC < SRR4302535.2715202/94‑1 (MQ=60)
GCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTC < SRR4302535.2043657/94‑1 (MQ=60)
CCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCCCCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCG < SRR4302535.3910978/94‑1 (MQ=60)
CGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGC > SRR4302535.1100702/1‑94 (MQ=60)
GGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCT < SRR4302535.970426/94‑1 (MQ=60)
GGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCT > SRR4302535.4671414/1‑94 (MQ=60)
GTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTG < SRR4302535.3609285/94‑1 (MQ=60)
TTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCG > SRR4302535.2810768/1‑94 (MQ=60)
TTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCG > SRR4302535.4488875/1‑94 (MQ=60)
TTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCG < SRR4302535.1188812/94‑1 (MQ=60)
CATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAT > SRR4302535.3065257/1‑94 (MQ=60)
CATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAT > SRR4302535.3795808/1‑94 (MQ=60)
ATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATT > SRR4302535.289802/1‑94 (MQ=60)
ATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATT > SRR4302535.2499550/1‑94 (MQ=60)
GTAAGATCTTTCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTT > SRR4302535.4153089/1‑94 (MQ=60)
GTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTT < SRR4302535.1260477/94‑1 (MQ=60)
GTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTT > SRR4302535.1520454/1‑94 (MQ=60)
AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAT < SRR4302535.1844234/94‑1 (MQ=60)
AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAT < SRR4302535.4215731/94‑1 (MQ=60)
AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAT < SRR4302535.1385812/94‑1 (MQ=60)
AGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATC < SRR4302535.3721080/94‑1 (MQ=60)
GATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCG < SRR4302535.1753199/94‑1 (MQ=60)
GATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCG > SRR4302535.4327739/1‑94 (MQ=60)
GATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCG < SRR4302535.1657861/94‑1 (MQ=60)
ATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGA < SRR4302535.1010864/94‑1 (MQ=60)
ATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGA > SRR4302535.2220241/1‑94 (MQ=60)
ATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGA > SRR4302535.1469603/1‑94 (MQ=60)
TCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAG < SRR4302535.631201/94‑1 (MQ=60)
CTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGG > SRR4302535.3748409/1‑94 (MQ=60)
CTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGC > SRR4302535.4394390/1‑94 (MQ=60)
AAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATA > SRR4302535.1162867/1‑94 (MQ=60)
AAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATA < SRR4302535.3066658/94‑1 (MQ=60)
AAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATA < SRR4302535.4102906/94‑1 (MQ=60)
AACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAC > SRR4302535.1067940/1‑94 (MQ=60)
AACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAC > SRR4302535.193235/1‑94 (MQ=60)
AACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAC > SRR4302535.939056/1‑94 (MQ=60)
ACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACC > SRR4302535.1674235/1‑94 (MQ=60)
ACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACC < SRR4302535.1268366/94‑1 (MQ=60)
ACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACC > SRR4302535.191132/1‑94 (MQ=60)
ACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACC < SRR4302535.3776114/94‑1 (MQ=60)
ACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACC > SRR4302535.568068/1‑94 (MQ=60)
ATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAG > SRR4302535.3672065/1‑94 (MQ=60)
AGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAA < SRR4302535.2920130/94‑1 (MQ=60)
cctcgCAGGGGGACAACCCCCGCCAGGAAGCCGAGGGCCCCTCCCACCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCAGCATACCAGAAA < SRR4302535.4108964/89‑1 (MQ=60)
GCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAA > SRR4302535.3244539/1‑94 (MQ=60)
CTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAA > SRR4302535.884391/1‑94 (MQ=60)
TCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAA < SRR4302535.1298436/94‑1 (MQ=60)
CCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAA > SRR4302535.861231/1‑94 (MQ=60)
CCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAG < SRR4302535.4631039/94‑1 (MQ=60)
CCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAG > SRR4302535.1584337/1‑94 (MQ=60)
CAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGG < SRR4302535.654642/94‑1 (MQ=60)
CAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGG < SRR4302535.4321109/94‑1 (MQ=60)
AGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGC < SRR4302535.441793/94‑1 (MQ=60)
AGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGC > SRR4302535.1535820/1‑94 (MQ=60)
GGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCC < SRR4302535.3113707/94‑1 (MQ=60)
CGACAACCACCGCCAGGAAGCCGAGGTCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGC < SRR4302535.3137971/94‑1 (MQ=60)
CGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGC < SRR4302535.3902215/94‑1 (MQ=60)
GACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCC > SRR4302535.720593/1‑94 (MQ=60)
GACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCC < SRR4302535.2525168/94‑1 (MQ=60)
GACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCC < SRR4302535.236421/94‑1 (MQ=60)
AACCACCGCGAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCAATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCC < SRR4302535.4440117/94‑1 (MQ=60)
AACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCC > SRR4302535.1970297/1‑94 (MQ=60)
AACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCC > SRR4302535.368231/1‑94 (MQ=60)
ACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCA < SRR4302535.3836129/94‑1 (MQ=60)
CCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCAT < SRR4302535.1317094/94‑1 (MQ=60)
CCACCGCCAGGAAGCAGAGGGCGCCTCCCATCCCTTTGTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCAT < SRR4302535.1871597/94‑1 (MQ=60)
CACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATTGAGCGGCATACCAGAAAACAGGCCAGCCCCCATG > SRR4302535.4372245/1‑94 (MQ=60)
CACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATG < SRR4302535.3037517/94‑1 (MQ=60)
CACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATG > SRR4302535.2738603/1‑94 (MQ=60)
ACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGG < SRR4302535.1955708/94‑1 (MQ=60)
ACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGG < SRR4302535.108809/94‑1 (MQ=60)
CAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCCTGGACACC > SRR4302535.331733/1‑94 (MQ=60)
AGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCA < SRR4302535.948923/94‑1 (MQ=60)
GGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCAC < SRR4302535.3821147/94‑1 (MQ=60)
AAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCA > SRR4302535.2862850/1‑94 (MQ=60)
AGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCAT < SRR4302535.2950353/94‑1 (MQ=60)
AGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCAT > SRR4302535.4516181/1‑94 (MQ=60)
GCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGCCACCACCATA > SRR4302535.3687065/1‑94 (MQ=60)
GCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATT > SRR4302535.3687064/1‑94 (MQ=60)
CCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTA < SRR4302535.354793/94‑1 (MQ=60)
CGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAA > SRR4302535.3639969/1‑94 (MQ=60)
GAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAA > SRR4302535.2055140/1‑94 (MQ=60)
AGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG < SRR4302535.684281/94‑1 (MQ=60)
AGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG < SRR4302535.4486073/94‑1 (MQ=60)
AGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG < SRR4302535.2489873/94‑1 (MQ=60)
AGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG < SRR4302535.2471143/94‑1 (MQ=60)
GGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCC < SRR4302535.4125026/94‑1 (MQ=60)
GCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCA < SRR4302535.1780119/94‑1 (MQ=60)
CGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCAG < SRR4302535.1004011/94‑1 (MQ=60)
|
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCAG > NC_000913/3574420‑3574606
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
