Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,574,513 T→C intergenic (+1216/+184) yhgN → / ← gntK hypothetical protein/gluconokinase 2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,574,5130TC99.7% 1079.1 / ‑5.4 351intergenic (+1216/+184)yhgN/gntKhypothetical protein/gluconokinase 2
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (192/158);  total (192/159)
Fisher's exact test for biased strand distribution p-value = 4.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.69e-01

Only 100 of 362 total aligned reads displayed.

TGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG  >  NC_000913/3574423‑3574602
                                                                                          |                                                                                         
tGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGgcgc                                                                                         >  1:7067952/1‑93 (MQ=255)
 gACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGcc                                                                                        >  1:1632607/1‑93 (MQ=255)
  aCGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCt                                                                                       <  1:4181229/93‑1 (MQ=255)
   cGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTc                                                                                      <  1:2588464/93‑1 (MQ=255)
     gCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTccc                                                                                    <  2:3954158/93‑1 (MQ=255)
      cAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCa                                                                                   <  1:1426709/93‑1 (MQ=255)
       aaTCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCAt                                                                                  <  1:3603328/93‑1 (MQ=255)
        aTCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATc                                                                                 >  2:2239995/1‑93 (MQ=255)
         tCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATcc                                                                                >  2:1683915/1‑93 (MQ=255)
           tGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCt                                                                              >  2:723204/1‑93 (MQ=255)
           tGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCt                                                                              >  2:6320245/1‑93 (MQ=255)
            gATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAGCCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCtt                                                                             >  1:6168558/1‑93 (MQ=255)
             aTCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCttt                                                                            >  1:898830/1‑93 (MQ=255)
             aTCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCttt                                                                            >  1:301217/1‑93 (MQ=255)
              tCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCtttt                                                                           <  2:4222079/93‑1 (MQ=255)
                gACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTc                                                                         >  1:6826171/1‑93 (MQ=255)
                    gcgcCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtc                                                                     <  1:3278464/93‑1 (MQ=255)
                      gcCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtcgt                                                                   <  1:5782506/93‑1 (MQ=255)
                       ccGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtcgtc                                                                  >  1:2531075/1‑93 (MQ=255)
                         ggTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGc                                                                <  1:3398529/93‑1 (MQ=255)
                          gTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCt                                                               >  1:7747158/1‑93 (MQ=255)
                          gTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCt                                                               >  2:7563951/1‑93 (MQ=255)
                            ttCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCTTCCCTTTTTCCATCGTCGCTGc                                                             <  2:7918023/93‑1 (MQ=255)
                            ttCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGc                                                             >  2:1930594/1‑93 (MQ=255)
                            ttCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGc                                                             >  1:4017223/1‑93 (MQ=255)
                            ttCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGc                                                             <  2:1618497/93‑1 (MQ=255)
                             tCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCg                                                            <  1:5353932/93‑1 (MQ=255)
                               aTGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAt                                                          >  1:7592404/1‑93 (MQ=255)
                                tGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtt                                                         >  2:6493060/1‑93 (MQ=255)
                                tGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtt                                                         >  1:6031378/1‑93 (MQ=255)
                                 gTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAttt                                                        <  1:1699791/93‑1 (MQ=255)
                                 gTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAttt                                                        >  1:6703565/1‑93 (MQ=255)
                                 gTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAttt                                                        <  2:7304200/93‑1 (MQ=255)
                                 gTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAttt                                                        >  1:6515091/1‑93 (MQ=255)
                                  tAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtttt                                                       <  2:7417285/93‑1 (MQ=255)
                                  tAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtttt                                                       <  1:7314969/93‑1 (MQ=255)
                                  tAAGATCTTGCCAAACATAGCGCCCAGGCCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtttt                                                       <  2:1812566/93‑1 (MQ=255)
                                   aaGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGTGATTTTa                                                      <  1:2196587/93‑1 (MQ=255)
                                   aaGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTa                                                      <  2:6434641/93‑1 (MQ=255)
                                   aaGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTa                                                      <  2:5974550/93‑1 (MQ=255)
                                    aGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAt                                                     >  1:6588499/1‑93 (MQ=255)
                                      aTCTTGCCAATCATAGCTCCCAGGGCGCCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCg                                                   <  2:1252996/93‑1 (MQ=255)
                                       tCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGa                                                  >  1:6417534/1‑93 (MQ=255)
                                       tCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGa                                                  >  1:5561244/1‑93 (MQ=255)
                                       tCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGa                                                  <  2:5857683/93‑1 (MQ=255)
                                        cTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAg                                                 >  2:1030402/1‑93 (MQ=255)
                                         ttGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGc                                                >  2:3031458/1‑93 (MQ=255)
                                           gCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCgg                                              >  2:4107327/1‑93 (MQ=255)
                                             cAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCa                                            >  1:7161549/1‑93 (MQ=255)
                                             cAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCa                                            >  1:6280530/1‑93 (MQ=255)
                                             cAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCa                                            >  2:4867243/1‑93 (MQ=255)
                                              aaaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt                                           <  2:89767/93‑1 (MQ=255)
                                              aaaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt                                           <  2:2014573/93‑1 (MQ=255)
                                              aaaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt                                           <  2:4240462/93‑1 (MQ=255)
                                              aaaCATAGCCCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt                                           >  2:5241706/1‑93 (MQ=255)
                                                aCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAc                                         >  1:4703942/1‑93 (MQ=255)
                                                 cATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAcc                                        <  2:6753065/93‑1 (MQ=255)
                                                  aTAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCa                                       >  2:6878601/1‑93 (MQ=255)
                                                  aTAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCAATCGTCGCTGCGATTTTATCGAGCGGCATACCa                                       <  1:1348954/93‑1 (MQ=255)
                                                   tAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAg                                      >  1:5985602/1‑93 (MQ=255)
                                                    aGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGa                                     >  1:4317349/1‑93 (MQ=255)
                                                         ccAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGaaaaaa                                >  2:3220991/1‑93 (MQ=255)
                                                         ccAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGaaaaaa                                >  2:3760078/1‑93 (MQ=255)
                                                         ccAGCGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGaaaaaa                                >  2:5046828/1‑93 (MQ=255)
                                                          cAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAg                               >  1:52004/1‑93 (MQ=255)
                                                            ggggGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc                             <  2:6040726/93‑1 (MQ=255)
                                                            gggCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc                             >  2:3284802/1‑93 (MQ=255)
                                                            gggCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc                             >  1:3739895/1‑93 (MQ=255)
                                                            gggCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc                             <  2:2090862/93‑1 (MQ=255)
                                                             ggCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGcc                            <  1:7657561/93‑1 (MQ=255)
                                                              gCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCa                           <  1:7222192/93‑1 (MQ=255)
                                                                gACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGc                         >  1:3673853/1‑93 (MQ=255)
                                                                 aCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGcc                        >  2:2763807/1‑93 (MQ=255)
                                                                 aCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGcc                        >  2:6999347/1‑93 (MQ=255)
                                                                 aCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGcc                        >  1:1539833/1‑93 (MQ=255)
                                                                  cAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGccc                       <  1:1822995/93‑1 (MQ=255)
                                                                    accaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGccccc                     >  2:7697163/1‑93 (MQ=255)
                                                                    accaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGccccc                     >  1:2758433/1‑93 (MQ=255)
                                                                     ccaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCa                    >  1:2338235/1‑93 (MQ=255)
                                                                     ccaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCa                    <  1:2413680/93‑1 (MQ=255)
                                                                       cccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATg                  <  2:4754450/92‑1 (MQ=255)
                                                                       cccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATg                  <  2:6177837/92‑1 (MQ=255)
                                                                          gCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGac               >  2:1194777/1‑93 (MQ=255)
                                                                           ccAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGaca              <  1:1497502/93‑1 (MQ=255)
                                                                           ccAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGaca              >  1:1023640/1‑93 (MQ=255)
                                                                           ccAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGaca              >  2:144760/1‑93 (MQ=255)
                                                                             aGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacc            >  1:5498937/1‑93 (MQ=255)
                                                                              ggAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacca           >  2:4510574/1‑93 (MQ=255)
                                                                              ggAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacca           >  1:4981244/1‑93 (MQ=255)
                                                                               gAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcaccac          <  2:5791707/93‑1 (MQ=255)
                                                                               gAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcaccac          <  2:5332828/93‑1 (MQ=255)
                                                                                aaGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACaccacc         >  2:2568349/1‑93 (MQ=255)
                                                                                 aGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGTGGCATACCAGAAAAAAGGACAGCCCCCATGGACAccaaca        >  2:1724869/1‑93 (MQ=255)
                                                                                 aGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACAccacca        <  2:4057468/93‑1 (MQ=255)
                                                                                  gCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCAt       >  2:2679436/1‑93 (MQ=255)
                                                                                      aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa   <  2:471133/93‑1 (MQ=255)
                                                                                      aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa   <  2:7168064/93‑1 (MQ=255)
                                                                                      aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa   <  2:3520693/93‑1 (MQ=255)
                                                                                       gggCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAg  >  2:555587/1‑93 (MQ=255)
                                                                                       gggCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAg  >  1:4594530/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG  >  NC_000913/3574423‑3574602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCAG  >  NC_000913/3574420‑3574606
                                                                                             |                                                                                             
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGATAACCACCGCCAGGAAGCCGAGGGC                                                                                               <  SRR4302543.2696404/94‑1 (MQ=60)
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGC                                                                                               <  SRR4302543.5355825/94‑1 (MQ=60)
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGC                                                                                               <  SRR4302543.641115/94‑1 (MQ=60)
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGC                                                                                               <  SRR4302543.5363694/94‑1 (MQ=60)
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGC                                                                                               <  SRR4302543.1609978/94‑1 (MQ=60)
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGC                                                                                               <  SRR4302543.3357789/94‑1 (MQ=60)
 TTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCG                                                                                              <  SRR4302543.4740819/94‑1 (MQ=60)
 TTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCG                                                                                              <  SRR4302543.7586282/94‑1 (MQ=60)
 TTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCG                                                                                              <  SRR4302543.2399726/94‑1 (MQ=60)
 TTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCG                                                                                              <  SRR4302543.4349182/94‑1 (MQ=60)
  TTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGC                                                                                             >  SRR4302543.7136578/1‑94 (MQ=60)
   TGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCC                                                                                            >  SRR4302543.1647162/1‑94 (MQ=60)
    GACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCT                                                                                           <  SRR4302543.4691291/94‑1 (MQ=60)
     ACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTC                                                                                          <  SRR4302543.4219118/94‑1 (MQ=60)
      CGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCC                                                                                         <  SRR4302543.430303/94‑1 (MQ=60)
      CGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCC                                                                                         <  SRR4302543.2612002/94‑1 (MQ=60)
      CGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCC                                                                                         >  SRR4302543.5764076/1‑94 (MQ=60)
      CGGAAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCC                                                                                         >  SRR4302543.5549611/1‑94 (MQ=60)
         CAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCAT                                                                                      <  SRR4302543.5309765/94‑1 (MQ=60)
         CAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCAT                                                                                      <  SRR4302543.3742443/94‑1 (MQ=60)
         CAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCAT                                                                                      >  SRR4302543.5952999/1‑94 (MQ=60)
         CAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCAT                                                                                      <  SRR4302543.224745/94‑1 (MQ=60)
         CAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCAT                                                                                      <  SRR4302543.1439617/94‑1 (MQ=60)
          AATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATC                                                                                     <  SRR4302543.3635129/94‑1 (MQ=60)
           ATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCC                                                                                    <  SRR4302543.4469071/94‑1 (MQ=60)
           ATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCC                                                                                    >  SRR4302543.882352/1‑94 (MQ=60)
           ATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCC                                                                                    >  SRR4302543.6113276/1‑94 (MQ=60)
           ATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCC                                                                                    >  SRR4302543.7523701/1‑94 (MQ=60)
              TGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAGCCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTT                                                                                 >  SRR4302543.6226919/1‑94 (MQ=60)
              TGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTT                                                                                 >  SRR4302543.1556844/1‑94 (MQ=60)
              TGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTT                                                                                 >  SRR4302543.6226920/1‑94 (MQ=60)
               GATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTT                                                                                >  SRR4302543.906765/1‑94 (MQ=60)
               GATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTT                                                                                >  SRR4302543.303924/1‑94 (MQ=60)
                ATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCGCCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTT                                                                               <  SRR4302543.5300857/94‑1 (MQ=60)
                ATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTT                                                                               <  SRR4302543.7763819/94‑1 (MQ=60)
                ATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTT                                                                               <  SRR4302543.7119627/94‑1 (MQ=60)
                 TCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTT                                                                              >  SRR4302543.6595056/1‑94 (MQ=60)
                  CGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTC                                                                             >  SRR4302543.6890614/1‑94 (MQ=60)
                  CGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTC                                                                             >  SRR4302543.5403959/1‑94 (MQ=60)
                   GACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCC                                                                            >  SRR4302543.368517/1‑94 (MQ=60)
                   GACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCC                                                                            <  SRR4302543.365772/94‑1 (MQ=60)
                   GACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCC                                                                            >  SRR4302543.7255361/1‑94 (MQ=60)
                   GACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCC                                                                            >  SRR4302543.3427568/1‑94 (MQ=60)
                    ACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCA                                                                           <  SRR4302543.3691105/94‑1 (MQ=60)
                     CTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAT                                                                          <  SRR4302543.7621424/94‑1 (MQ=60)
                     CTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCAATCCCTTTTTCCAT                                                                          >  SRR4302543.6042172/1‑94 (MQ=60)
                      TGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATC                                                                         <  SRR4302543.2358799/94‑1 (MQ=60)
                      TGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATC                                                                         >  SRR4302543.2567212/1‑94 (MQ=60)
                       GCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCG                                                                        <  SRR4302543.3308065/94‑1 (MQ=60)
                       GCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCG                                                                        <  SRR4302543.3139321/94‑1 (MQ=60)
                         GCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTC                                                                      <  SRR4302543.5923646/94‑1 (MQ=60)
                         GCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTC                                                                      <  SRR4302543.5835123/94‑1 (MQ=60)
                         GCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTC                                                                      >  SRR4302543.2554112/1‑94 (MQ=60)
                           CGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGC                                                                    >  SRR4302543.3468357/1‑94 (MQ=60)
                           CGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGC                                                                    >  SRR4302543.6669981/1‑94 (MQ=60)
                           CGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGC                                                                    >  SRR4302543.6769474/1‑94 (MQ=60)
                           CGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGC                                                                    >  SRR4302543.6055600/1‑94 (MQ=60)
                            GGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCGCCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCT                                                                   <  SRR4302543.1582460/94‑1 (MQ=60)
                            GGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCT                                                                   >  SRR4302543.7805737/1‑94 (MQ=60)
                            GGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCT                                                                   >  SRR4302543.1704932/1‑94 (MQ=60)
                            GGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCT                                                                   <  SRR4302543.3400392/94‑1 (MQ=60)
                            GGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCT                                                                   <  SRR4302543.3839953/94‑1 (MQ=60)
                            GGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCT                                                                   <  SRR4302543.3428981/94‑1 (MQ=60)
                            GGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCT                                                                   >  SRR4302543.7820326/1‑94 (MQ=60)
                             GTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTG                                                                  >  SRR4302543.469850/1‑94 (MQ=60)
                              TTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGC                                                                 <  SRR4302543.7293665/94‑1 (MQ=60)
                              TTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGC                                                                 >  SRR4302543.4053099/1‑94 (MQ=60)
                              TTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGC                                                                 >  SRR4302543.4845022/1‑94 (MQ=60)
                              TTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGC                                                                 >  SRR4302543.6717667/1‑94 (MQ=60)
                                TCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGA                                                               <  SRR4302543.5402385/94‑1 (MQ=60)
                                 CATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAT                                                              >  SRR4302543.5500984/1‑94 (MQ=60)
                                 CATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAT                                                              >  SRR4302543.7664537/1‑94 (MQ=60)
                                  ATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATT                                                             >  SRR4302543.6087857/1‑94 (MQ=60)
                                   TGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTT                                                            >  SRR4302543.6766840/1‑94 (MQ=60)
                                   TGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTT                                                            >  SRR4302543.6576456/1‑94 (MQ=60)
                                    GTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTT                                                           <  SRR4302543.6822600/94‑1 (MQ=60)
                                    GTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTT                                                           <  SRR4302543.1715023/94‑1 (MQ=60)
                                    GTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTT                                                           >  SRR4302543.2362110/1‑94 (MQ=60)
                                    GTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTT                                                           <  SRR4302543.1715022/94‑1 (MQ=60)
                                     TAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTTGCTGCGATTTTA                                                          >  SRR4302543.5326887/1‑94 (MQ=60)
                                     TAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTA                                                          <  SRR4302543.7385459/94‑1 (MQ=60)
                                      AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGTGATTTTAT                                                         <  SRR4302543.2216334/94‑1 (MQ=60)
                                      AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAT                                                         >  SRR4302543.957644/1‑94 (MQ=60)
                                      AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAT                                                         >  SRR4302543.6650568/1‑94 (MQ=60)
                                      AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAT                                                         <  SRR4302543.5504480/94‑1 (MQ=60)
                                      AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAT                                                         <  SRR4302543.115888/94‑1 (MQ=60)
                                      AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAT                                                         <  SRR4302543.1515153/94‑1 (MQ=60)
                                      AAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAT                                                         <  SRR4302543.1508972/94‑1 (MQ=60)
                                       AGAGCTTACCAAACGTAGCTCCCAGGGCGGCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATC                                                        <  SRR4302543.2397353/94‑1 (MQ=60)
                                         ATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGA                                                      >  SRR4302543.6477988/1‑94 (MQ=60)
                                         ATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGA                                                      >  SRR4302543.6477987/1‑94 (MQ=60)
                                         ATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGA                                                      >  SRR4302543.5611818/1‑94 (MQ=60)
                                          TCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAG                                                     <  SRR4302543.1451630/94‑1 (MQ=60)
                                           CTTGCCAAACATAGCTCCCAGGGCGACACCCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGC                                                    <  SRR4302543.299827/94‑1 (MQ=60)
                                           CTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGC                                                    <  SRR4302543.1826832/94‑1 (MQ=60)
                                             TGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGG                                                  >  SRR4302543.3171517/1‑94 (MQ=60)
                                             TGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGG                                                  <  SRR4302543.6373993/94‑1 (MQ=60)
                                             TGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGG                                                  >  SRR4302543.3930916/1‑94 (MQ=60)
                                              GCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGC                                                 >  SRR4302543.7785600/1‑94 (MQ=60)
                                              GCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGC                                                 <  SRR4302543.3279225/94‑1 (MQ=60)
                                              GCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGC                                                 >  SRR4302543.7316768/1‑94 (MQ=60)
                                              GCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGC                                                 >  SRR4302543.5026418/1‑94 (MQ=60)
                                               CCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCA                                                >  SRR4302543.6313925/1‑94 (MQ=60)
                                               CCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCA                                                >  SRR4302543.6339718/1‑94 (MQ=60)
                                               CCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCA                                                >  SRR4302543.7231128/1‑94 (MQ=60)
                                                CAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAT                                               <  SRR4302543.6323908/94‑1 (MQ=60)
                                                CAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAT                                               <  SRR4302543.6223975/94‑1 (MQ=60)
                                                  AACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAC                                             <  SRR4302543.2557681/94‑1 (MQ=60)
                                                  AACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAC                                             <  SRR4302543.3448033/94‑1 (MQ=60)
                                                  AACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAC                                             >  SRR4302543.4746920/1‑94 (MQ=60)
                                                  AACATAGCGCCCAGGGCGACAACCCCCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAC                                             <  SRR4302543.4411120/94‑1 (MQ=60)
                                                    CATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATagagtggagatcggaagagcggttcagcagg                                           >  SRR4302543.6646174/1‑63 (MQ=60)
                                                    CATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCA                                           >  SRR4302543.2415652/1‑94 (MQ=60)
                                                    CATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCA                                           >  SRR4302543.6748140/1‑94 (MQ=60)
                                                     ATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAG                                          >  SRR4302543.6939091/1‑94 (MQ=60)
                                                     ATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAG                                          >  SRR4302543.1553467/1‑94 (MQ=60)
                                                     ATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAG                                          >  SRR4302543.1547519/1‑94 (MQ=60)
                                                     ATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAG                                          >  SRR4302543.6040447/1‑94 (MQ=60)
                                                     ATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAG                                          >  SRR4302543.6040448/1‑94 (MQ=60)
                                                     ATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCAATCGTCGCTGCGATTTTATCGAGCGGCATACCAG                                          <  SRR4302543.1361022/94‑1 (MQ=60)
                                                      TAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGA                                         >  SRR4302543.4356561/1‑94 (MQ=60)
                                                      TAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGA                                         >  SRR4302543.4448581/1‑94 (MQ=60)
                                                         CTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAA                                      >  SRR4302543.5185867/1‑94 (MQ=60)
                                                          TCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAA                                     >  SRR4302543.5690756/1‑94 (MQ=60)
                                                           CCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAACAA                                    >  SRR4302543.5151354/1‑94 (MQ=60)
                                                           CCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAA                                    >  SRR4302543.7208658/1‑94 (MQ=60)
                                                           CCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAA                                    >  SRR4302543.6361927/1‑94 (MQ=60)
                                                            CCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAG                                   >  SRR4302543.52465/1‑94 (MQ=60)
                                                            CCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAG                                   <  SRR4302543.7202325/94‑1 (MQ=60)
                                                             CAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGG                                  <  SRR4302543.1726076/94‑1 (MQ=60)
                                                             CAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGG                                  <  SRR4302543.6818991/94‑1 (MQ=60)
                                                             CAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATCTTATCGAGCGCCATACAAGACAAAAGG                                  >  SRR4302543.7302164/1‑94 (MQ=60)
                                                              AGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGC                                 >  SRR4302543.3772793/1‑94 (MQ=60)
                                                              AGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGC                                 >  SRR4302543.3772794/1‑94 (MQ=60)
                                                                GGCGACACCCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCA                               <  SRR4302543.7716065/94‑1 (MQ=60)
                                                                GGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCA                               >  SRR4302543.2631533/1‑94 (MQ=60)
                                                                GGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCA                               <  SRR4302543.7716066/94‑1 (MQ=60)
                                                                GGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCA                               <  SRR4302543.7730153/94‑1 (MQ=60)
                                                                 GCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAG                              <  SRR4302543.2470530/94‑1 (MQ=60)
                                                                 GCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAG                              >  SRR4302543.1748173/1‑94 (MQ=60)
                                                                 GCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAG                              <  SRR4302543.7292182/94‑1 (MQ=60)
                                                                 GCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAG                              <  SRR4302543.881193/94‑1 (MQ=60)
                                                                  CGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGC                             <  SRR4302543.7880763/94‑1 (MQ=60)
                                                                  CGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGC                             >  SRR4302543.3706108/1‑94 (MQ=60)
                                                                   GACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATTCAGCGGCATACCAGCAAAAAGGGCAGCC                            >  SRR4302543.4250266/1‑94 (MQ=60)
                                                                   GACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGGC                            >  SRR4302543.1990448/1‑94 (MQ=60)
                                                                   GACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCC                            >  SRR4302543.5597507/1‑94 (MQ=60)
                                                                   GACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCC                            >  SRR4302543.1553625/1‑94 (MQ=60)
                                                                    ACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCC                           <  SRR4302543.263142/94‑1 (MQ=60)
                                                                     CAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCC                          >  SRR4302543.2555515/1‑94 (MQ=60)
                                                                     CAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCC                          <  SRR4302543.1839359/94‑1 (MQ=60)
                                                                      AACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCC                         >  SRR4302543.2783526/1‑94 (MQ=60)
                                                                       ACCCCCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCA                        <  SRR4302543.3602756/94‑1 (MQ=60)
                                                                       ACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCA                        >  SRR4302543.4197355/1‑94 (MQ=60)
                                                                       ACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCA                        >  SRR4302543.2359452/1‑94 (MQ=60)
                                                                        CCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCAT                       <  SRR4302543.7610812/94‑1 (MQ=60)
                                                                        CCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCAT                       <  SRR4302543.1583908/94‑1 (MQ=60)
                                                                        CCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCAT                       <  SRR4302543.6479660/94‑1 (MQ=60)
                                                                        CCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCAT                       <  SRR4302543.2435487/94‑1 (MQ=60)
                                                                        CCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCATCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCAT                       <  SRR4302543.1384681/94‑1 (MQ=60)
                                                                         CACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATG                      <  SRR4302543.2280064/94‑1 (MQ=60)
                                                                         CACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATG                      <  SRR4302543.383018/94‑1 (MQ=60)
                                                                         CACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATG                      <  SRR4302543.6153932/94‑1 (MQ=60)
                                                                         CACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATG                      >  SRR4302543.7252599/1‑94 (MQ=60)
                                                                            CGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAC                   >  SRR4302543.3005897/1‑94 (MQ=60)
                                                                            CGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAC                   >  SRR4302543.5180220/1‑94 (MQ=60)
                                                                            CGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAC                   >  SRR4302543.1384365/1‑94 (MQ=60)
                                                                             GCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACA                  >  SRR4302543.1032698/1‑94 (MQ=60)
                                                                              CCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACAC                 <  SRR4302543.1510972/94‑1 (MQ=60)
                                                                               CAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACC                >  SRR4302543.2461330/1‑94 (MQ=60)
                                                                               CAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACC                >  SRR4302543.5548824/1‑94 (MQ=60)
                                                                               CAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACC                >  SRR4302543.2185448/1‑94 (MQ=60)
                                                                                AGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCA               >  SRR4302543.6568259/1‑94 (MQ=60)
                                                                                AGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCA               >  SRR4302543.5026590/1‑94 (MQ=60)
                                                                                   AAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCA            <  SRR4302543.4108261/94‑1 (MQ=60)
                                                                                    AGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCAT           <  SRR4302543.4063182/94‑1 (MQ=60)
                                                                                        GAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAA       >  SRR4302543.2728789/1‑94 (MQ=60)
                                                                                        GAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAA       <  SRR4302543.1219821/94‑1 (MQ=60)
                                                                                        GAGGGCGCCTCCCATCCCTTTTTCCAGCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAA       <  SRR4302543.7256710/94‑1 (MQ=60)
                                                                                         AGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG      <  SRR4302543.1410650/94‑1 (MQ=60)
                                                                                         AGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG      <  SRR4302543.4936006/94‑1 (MQ=60)
                                                                                         AGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG      <  SRR4302543.7193670/94‑1 (MQ=60)
                                                                                         AGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG      >  SRR4302543.4636258/1‑94 (MQ=60)
                                                                                          GGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGC     >  SRR4302543.2781124/1‑94 (MQ=60)
                                                                                           GGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCC    >  SRR4302543.754543/1‑94 (MQ=60)
                                                                                            GCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCA   <  SRR4302543.4196371/94‑1 (MQ=60)
                                                                                            GCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCA   <  SRR4302543.5425888/94‑1 (MQ=60)
                                                                                            GCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCA   >  SRR4302543.4456276/1‑94 (MQ=60)
                                                                                             CGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCAG  <  SRR4302543.5855400/94‑1 (MQ=60)
                                                                                             CGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCAG  <  SRR4302543.1624962/94‑1 (MQ=60)
                                                                                             CGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCAG  >  SRR4302543.225225/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTTTGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAGCCAG  >  NC_000913/3574420‑3574606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: