Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,620,852 |
A→G |
T1344A (ACT→GCT) |
rhsB → |
RhsB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,620,852 | 0 | A | G | 100.0%
| 891.7
/ NA
| 275 | T1344A (ACT→GCT) | rhsB | RhsB |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (139/136); total (139/136) |
Only 100 of 277 total aligned reads displayed.
TCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATC > NC_000913/3620762‑3620941
|
tcAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCt > 2:3936228/1‑93 (MQ=255)
aaCAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCa > 1:1015085/1‑93 (MQ=255)
aCAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCAt > 1:4477905/1‑93 (MQ=255)
cAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATg < 2:2761954/93‑1 (MQ=255)
aGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATgg < 1:3589555/93‑1 (MQ=255)
aGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATgg < 1:2530708/93‑1 (MQ=255)
aCCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGc < 2:2601029/93‑1 (MQ=255)
cTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAg > 1:1410590/1‑93 (MQ=255)
tAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGa > 2:360883/1‑93 (MQ=255)
aaCCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGAt < 2:4625918/93‑1 (MQ=255)
aCCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATa < 2:86835/93‑1 (MQ=255)
aCCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATa > 1:4005709/1‑93 (MQ=255)
aCCAAGGAGAAAAAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATAATGCTCATGGTGCAGATa < 2:1648441/93‑1 (MQ=255)
ccGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAg > 2:2142294/1‑93 (MQ=255)
ccGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAg > 1:3088919/1‑93 (MQ=255)
cGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGt < 2:3732858/93‑1 (MQ=255)
gaggagAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTc > 2:1266466/1‑93 (MQ=255)
gaggagAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTc > 1:3160082/1‑93 (MQ=255)
ggagAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCAt < 1:4427861/93‑1 (MQ=255)
gagaAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATg > 2:78105/1‑93 (MQ=255)
agaaagaaAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATgg > 1:2946984/1‑93 (MQ=255)
gaaagaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGga < 2:140092/93‑1 (MQ=255)
aaagaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGgag < 2:485395/93‑1 (MQ=255)
aagaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGgaga < 1:2320684/93‑1 (MQ=255)
agaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGaa > 2:2646481/1‑93 (MQ=255)
agaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGaa > 2:4493136/1‑93 (MQ=255)
agaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGaa < 1:725742/93‑1 (MQ=255)
agaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGaa > 2:1620159/1‑93 (MQ=255)
gaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAat < 2:1199364/93‑1 (MQ=255)
gaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAat > 2:1988893/1‑93 (MQ=255)
aaaaGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAata < 1:795518/93‑1 (MQ=255)
aaaGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAatat > 2:2058852/1‑93 (MQ=255)
aaaGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAatat > 1:2248262/1‑93 (MQ=255)
aaGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAtt < 1:2752458/93‑1 (MQ=255)
aGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTg > 1:1649815/1‑93 (MQ=255)
ggATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTgg > 1:3237322/1‑93 (MQ=255)
aTCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGa < 1:1879891/93‑1 (MQ=255)
aTCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGa < 1:1548784/93‑1 (MQ=255)
tCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAc < 2:2697296/93‑1 (MQ=255)
cATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACg > 2:2998667/1‑93 (MQ=255)
atatCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGa < 1:4188215/93‑1 (MQ=255)
tatCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGaa > 2:2956366/1‑93 (MQ=255)
atCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGaaa > 1:3433858/1‑93 (MQ=255)
atCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGaaa < 2:2314453/93‑1 (MQ=255)
atCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGaaa < 1:4374028/93‑1 (MQ=255)
tCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAat < 1:4563988/93‑1 (MQ=255)
tCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAat < 1:3329007/93‑1 (MQ=255)
ccATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCGGATAGTCATGGAGAATATTGGGACGAAata < 1:2805062/93‑1 (MQ=255)
ccATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAata > 1:644809/1‑93 (MQ=255)
ccATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAata < 1:3626294/93‑1 (MQ=255)
cATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAatat > 1:4659190/1‑93 (MQ=255)
cATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAatat > 1:3749507/1‑93 (MQ=255)
cATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAatat > 1:1746535/1‑93 (MQ=255)
ttCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAttt > 1:4253510/1‑93 (MQ=255)
ttCAATAGCCCTTGCCCTAATGCTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAttt > 1:1217504/1‑93 (MQ=255)
tCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAtttt > 1:28318/1‑93 (MQ=255)
tCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAtttt < 1:2077226/93‑1 (MQ=255)
aaTAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGTGAATATTGGGACGAAATATTTTCa > 1:1192951/1‑93 (MQ=255)
aTAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAg > 1:4163283/1‑93 (MQ=255)
tAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAgg > 2:696332/1‑93 (MQ=255)
gCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTa > 2:54608/1‑93 (MQ=255)
gCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTa > 1:3908608/1‑93 (MQ=255)
cccTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTaa < 2:2440048/93‑1 (MQ=255)
cTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCGTGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAg < 2:4377577/93‑1 (MQ=255)
cTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAg > 2:284633/1‑93 (MQ=255)
cTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAg > 2:405804/1‑93 (MQ=255)
cTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAg > 2:3677448/1‑93 (MQ=255)
ttGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGa < 1:2168549/93‑1 (MQ=255)
cccTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATga < 1:2660187/93‑1 (MQ=255)
ccTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATgag < 1:2025276/93‑1 (MQ=255)
ccTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATgag > 1:569110/1‑93 (MQ=255)
ccTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATgag > 2:1066969/1‑93 (MQ=255)
tAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGaa > 1:917851/1‑93 (MQ=255)
tGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAAt > 2:1144625/1‑93 (MQ=255)
ggTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATa < 1:808284/93‑1 (MQ=255)
aCTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGtt < 1:1643921/93‑1 (MQ=255)
tGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaa < 1:3856132/93‑1 (MQ=255)
tGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaa < 2:3423177/93‑1 (MQ=255)
gagaAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaaa < 2:4422419/93‑1 (MQ=255)
agaAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaaaa < 1:1590695/93‑1 (MQ=255)
agaAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaaaa < 2:1497211/93‑1 (MQ=255)
gaAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAg > 2:3200042/1‑93 (MQ=255)
gaAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAg < 2:137665/93‑1 (MQ=255)
gaAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAg > 1:1954288/1‑93 (MQ=255)
aaGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTa > 1:2205002/1‑93 (MQ=255)
gTATCCGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTaaa < 2:1866446/93‑1 (MQ=255)
gTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTaaa > 2:3377011/1‑93 (MQ=255)
tATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAg > 1:3515735/1‑93 (MQ=255)
aTCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGa < 2:3765613/93‑1 (MQ=255)
aTCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGa < 1:976826/93‑1 (MQ=255)
cAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATa > 2:4357549/1‑93 (MQ=255)
aGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATaa < 2:3326701/93‑1 (MQ=255)
aGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATaa < 2:2223479/93‑1 (MQ=255)
gCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAc < 1:2735766/93‑1 (MQ=255)
ttATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACaa < 2:3062713/93‑1 (MQ=255)
tATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAat < 1:1333968/93‑1 (MQ=255)
aTCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAata < 2:2515365/93‑1 (MQ=255)
tCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAatat > 1:1093238/1‑93 (MQ=255)
cATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATc > 2:3092538/1‑93 (MQ=255)
cATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATc > 1:3406287/1‑93 (MQ=255)
|
TCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATC > NC_000913/3620762‑3620941
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAGT > NC_000913/3620759‑3620945
|
TTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATG < SRR4302535.1186794/94‑1 (MQ=60)
TCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGC < SRR4302535.4026462/94‑1 (MQ=60)
CTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCT > SRR4302535.3225398/1‑94 (MQ=60)
CTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCT > SRR4302535.4019532/1‑94 (MQ=60)
CTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCT > SRR4302535.1299146/1‑94 (MQ=60)
TCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTC > SRR4302535.1611293/1‑94 (MQ=60)
TCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTC > SRR4302535.2828934/1‑94 (MQ=60)
CAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCA > SRR4302535.1022303/1‑94 (MQ=60)
AACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCAT > SRR4302535.4508650/1‑94 (MQ=60)
AACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCAT > SRR4302535.2756845/1‑94 (MQ=60)
AGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGT > SRR4302535.1703545/1‑94 (MQ=60)
AGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGT < SRR4302535.4231878/94‑1 (MQ=60)
AGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGT < SRR4302535.3614456/94‑1 (MQ=60)
AGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGT < SRR4302535.2548945/94‑1 (MQ=60)
AGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGT < SRR4302535.3229977/94‑1 (MQ=60)
GCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTG < SRR4302535.78195/94‑1 (MQ=60)
CACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGC > SRR4302535.915591/1‑94 (MQ=60)
CCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAG > SRR4302535.1420662/1‑94 (MQ=60)
CCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAG > SRR4302535.1486703/1‑94 (MQ=60)
TAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGAT < SRR4302535.3625900/94‑1 (MQ=60)
TAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGAT > SRR4302535.3330024/1‑94 (MQ=60)
AACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATA > SRR4302535.4033111/1‑94 (MQ=60)
ACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAG > SRR4302535.3110432/1‑94 (MQ=60)
CCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGT < SRR4302535.1174719/94‑1 (MQ=60)
CGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTC > SRR4302535.3182008/1‑94 (MQ=60)
AGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCAT > SRR4302535.3007738/1‑94 (MQ=60)
GGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATG < SRR4302535.4458192/94‑1 (MQ=60)
GGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATG < SRR4302535.641748/94‑1 (MQ=60)
GAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGG > SRR4302535.2967691/1‑94 (MQ=60)
GAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGG < SRR4302535.1712241/94‑1 (MQ=60)
GAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGG > SRR4302535.3948407/1‑94 (MQ=60)
GAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCAGGCTCATGGTGCAGATAGTCATGG < SRR4302535.1567341/94‑1 (MQ=60)
AGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGA < SRR4302535.3549011/94‑1 (MQ=60)
AGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGA > SRR4302535.808849/1‑94 (MQ=60)
GAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAG < SRR4302535.1222136/94‑1 (MQ=60)
GAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAG < SRR4302535.660818/94‑1 (MQ=60)
AAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAA < SRR4302535.2024990/94‑1 (MQ=60)
AAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAA < SRR4302535.2337294/94‑1 (MQ=60)
AGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAAT < SRR4302535.730837/94‑1 (MQ=60)
AGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAAT > SRR4302535.2134398/1‑94 (MQ=60)
GAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATA > SRR4302535.4661951/1‑94 (MQ=60)
AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT < SRR4302535.1584159/94‑1 (MQ=60)
AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT < SRR4302535.4335173/94‑1 (MQ=60)
AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT < SRR4302535.1385062/94‑1 (MQ=60)
AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT < SRR4302535.801102/94‑1 (MQ=60)
AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT > SRR4302535.2264267/1‑94 (MQ=60)
AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT < SRR4302535.2814055/94‑1 (MQ=60)
AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT > SRR4302535.414761/1‑94 (MQ=60)
AAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATT < SRR4302535.813907/94‑1 (MQ=60)
AAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTG > SRR4302535.2113882/1‑94 (MQ=60)
AAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTG < SRR4302535.2772074/94‑1 (MQ=60)
AAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTG > SRR4302535.3806294/1‑94 (MQ=60)
AAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTG > SRR4302535.1661745/1‑94 (MQ=60)
AGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGG < SRR4302535.4426334/94‑1 (MQ=60)
AGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGG > SRR4302535.3259796/1‑94 (MQ=60)
AGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGG > SRR4302535.3933202/1‑94 (MQ=60)
AGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGG > SRR4302535.2185829/1‑94 (MQ=60)
GGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGG < SRR4302535.1654197/94‑1 (MQ=60)
ATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAC > SRR4302535.2793911/1‑94 (MQ=60)
ATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAC < SRR4302535.1559942/94‑1 (MQ=60)
ATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAC > SRR4302535.3465136/1‑94 (MQ=60)
ATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAC > SRR4302535.353278/1‑94 (MQ=60)
ATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAC < SRR4302535.2280711/94‑1 (MQ=60)
ATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAC < SRR4302535.1893435/94‑1 (MQ=60)
TCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACG < SRR4302535.1340315/94‑1 (MQ=60)
TCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACG > SRR4302535.2046330/1‑94 (MQ=60)
TCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACG < SRR4302535.720808/94‑1 (MQ=60)
ATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAA < SRR4302535.3711665/94‑1 (MQ=60)
ATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAA < SRR4302535.4216882/94‑1 (MQ=60)
TATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAA < SRR4302535.3374945/94‑1 (MQ=60)
TATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAA > SRR4302535.3457723/1‑94 (MQ=60)
ATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAAT < SRR4302535.4403953/94‑1 (MQ=60)
ATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAAT > SRR4302535.735904/1‑94 (MQ=60)
TCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATA < SRR4302535.3352166/94‑1 (MQ=60)
TCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATA < SRR4302535.4595132/94‑1 (MQ=60)
TCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATA > SRR4302535.649308/1‑94 (MQ=60)
CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCGGATAGTCATGGAGAATATTGGGACGAAATAT < SRR4302535.2825007/94‑1 (MQ=60)
CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAT > SRR4302535.539930/1‑94 (MQ=60)
CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAT > SRR4302535.4690706/1‑94 (MQ=60)
CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAT > SRR4302535.1759170/1‑94 (MQ=60)
CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAT < SRR4302535.419317/94‑1 (MQ=60)
CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAT < SRR4302535.3651425/94‑1 (MQ=60)
CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAT > SRR4302535.3775446/1‑94 (MQ=60)
ATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTT > SRR4302535.2861781/1‑94 (MQ=60)
ATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTT > SRR4302535.1820807/1‑94 (MQ=60)
ATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTT > SRR4302535.4282657/1‑94 (MQ=60)
ATTCAATAGCCCTTGCCCTAATGCTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTT > SRR4302535.1226238/1‑94 (MQ=60)
TTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTT > SRR4302535.28541/1‑94 (MQ=60)
TTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTT < SRR4302535.887855/94‑1 (MQ=60)
TCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTC < SRR4302535.2092190/94‑1 (MQ=60)
TCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTC > SRR4302535.1658060/1‑94 (MQ=60)
CAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGTGAATATTGGGACGAAATATTTTCA > SRR4302535.1201500/1‑94 (MQ=60)
CAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCA > SRR4302535.2567293/1‑94 (MQ=60)
AATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAG > SRR4302535.1990631/1‑94 (MQ=60)
AATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAG > SRR4302535.4191786/1‑94 (MQ=60)
ATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGG < SRR4302535.3406356/94‑1 (MQ=60)
ATAGCCCTTGACCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGG > SRR4302535.4438738/1‑94 (MQ=60)
AGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTA > SRR4302535.1900549/1‑94 (MQ=60)
AGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTA > SRR4302535.3935379/1‑94 (MQ=60)
GCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAA > SRR4302535.282685/1‑94 (MQ=60)
CCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAG < SRR4302535.3332685/94‑1 (MQ=60)
CCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAG < SRR4302535.147092/94‑1 (MQ=60)
CCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAG > SRR4302535.477444/1‑94 (MQ=60)
TTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAT < SRR4302535.2184087/94‑1 (MQ=60)
TTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAT < SRR4302535.3134846/94‑1 (MQ=60)
TTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAT < SRR4302535.2510984/94‑1 (MQ=60)
TGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATG < SRR4302535.4476692/94‑1 (MQ=60)
CCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAG < SRR4302535.2679243/94‑1 (MQ=60)
CCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAG > SRR4302535.573106/1‑94 (MQ=60)
CCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGA < SRR4302535.2669899/94‑1 (MQ=60)
CCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGA > SRR4302535.2498962/1‑94 (MQ=60)
CCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGA < SRR4302535.2039871/94‑1 (MQ=60)
CCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGA > SRR4302535.1152562/1‑94 (MQ=60)
CTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAA > SRR4302535.924361/1‑94 (MQ=60)
CTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAA > SRR4302535.4119769/1‑94 (MQ=60)
CTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAA < SRR4302535.4541274/94‑1 (MQ=60)
TAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAA < SRR4302535.947906/94‑1 (MQ=60)
ATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAAT < SRR4302535.2749667/94‑1 (MQ=60)
GGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAG < SRR4302535.813944/94‑1 (MQ=60)
TACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTT < SRR4302535.4677238/94‑1 (MQ=60)
ACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTA < SRR4302535.1655803/94‑1 (MQ=60)
ACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTA < SRR4302535.428609/94‑1 (MQ=60)
TGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAA < SRR4302535.3882684/94‑1 (MQ=60)
GAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAA < SRR4302535.2238279/94‑1 (MQ=60)
GAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAA > SRR4302535.2856730/1‑94 (MQ=60)
AGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAG < SRR4302535.3913761/94‑1 (MQ=60)
AGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAG < SRR4302535.1602172/94‑1 (MQ=60)
AGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAG > SRR4302535.1968353/1‑94 (MQ=60)
AGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAG < SRR4302535.310919/94‑1 (MQ=60)
AAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTA > SRR4302535.2220707/1‑94 (MQ=60)
AAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTA < SRR4302535.4571649/94‑1 (MQ=60)
GTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAG > SRR4302535.3540164/1‑94 (MQ=60)
ATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGAT < SRR4302535.983760/94‑1 (MQ=60)
ATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGAT < SRR4302535.1225487/94‑1 (MQ=60)
ATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGAT < SRR4302535.1920507/94‑1 (MQ=60)
CAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAANATAA > SRR4302535.3255670/1‑94 (MQ=60)
CAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAA < SRR4302535.3552642/94‑1 (MQ=60)
AGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAC < SRR4302535.347/94‑1 (MQ=60)
AGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAC < SRR4302535.2221476/94‑1 (MQ=60)
GCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACA > SRR4302535.3818585/1‑94 (MQ=60)
GCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACA < SRR4302535.2755285/94‑1 (MQ=60)
GCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACA > SRR4302535.2717960/1‑94 (MQ=60)
GCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACA < SRR4302535.1828587/94‑1 (MQ=60)
CTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAA > SRR4302535.3627752/1‑94 (MQ=60)
TATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATA > SRR4302535.1100926/1‑94 (MQ=60)
TATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATA < SRR4302535.1343483/94‑1 (MQ=60)
ATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATAT > SRR4302535.1101023/1‑94 (MQ=60)
TCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATC < SRR4302535.2196891/94‑1 (MQ=60)
TCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATC > SRR4302535.3429995/1‑94 (MQ=60)
CATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCA < SRR4302535.4266990/94‑1 (MQ=60)
ATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAA > SRR4302535.147398/1‑94 (MQ=60)
ATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAA > SRR4302535.3650185/1‑94 (MQ=60)
GCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAGT > SRR4302535.2317751/1‑94 (MQ=60)
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TTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAGT > NC_000913/3620759‑3620945
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
