Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,621,415 T→C intergenic (+2/‑594) yhhH → / → yhhI hypothetical protein/putative receptor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,621,4150TC99.4% 1118.0 / ‑3.8 349intergenic (+2/‑594)yhhH/yhhIhypothetical protein/putative receptor
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (154/193);  total (154/195)
Fisher's exact test for biased strand distribution p-value = 5.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01

Only 100 of 352 total aligned reads displayed.

TTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATG  >  NC_000913/3621325‑3621505
                                                                                          |                                                                                          
 tCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATg                                                                                         >  1:6402637/1‑93 (MQ=255)
    cTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTaa                                                                                      <  2:4905308/93‑1 (MQ=255)
    cTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTaa                                                                                      <  2:5712476/93‑1 (MQ=255)
     tCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAg                                                                                     >  2:5506815/1‑93 (MQ=255)
       aGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGa                                                                                   <  1:3245522/93‑1 (MQ=255)
       aGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGa                                                                                   <  2:1255520/93‑1 (MQ=255)
       aGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGa                                                                                   >  2:2400111/1‑93 (MQ=255)
          ccAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATaa                                                                                <  2:4771577/93‑1 (MQ=255)
          ccAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATaa                                                                                <  1:3647453/93‑1 (MQ=255)
           cAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAAt                                                                               >  2:6294699/1‑93 (MQ=255)
           cAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAAt                                                                               <  2:770507/93‑1 (MQ=255)
            aaaTTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATc                                                                              >  1:3334686/1‑93 (MQ=255)
              aTTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCaa                                                                            <  1:3006626/93‑1 (MQ=255)
               ttGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCaaa                                                                           <  2:7567175/93‑1 (MQ=255)
                tGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAAc                                                                          <  1:5056210/93‑1 (MQ=255)
                tGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAAc                                                                          <  1:308937/93‑1 (MQ=255)
                   tggtggGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATc                                                                       >  2:6047015/1‑93 (MQ=255)
                     gtggGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCgt                                                                     <  1:4200776/93‑1 (MQ=255)
                     gtggGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCgt                                                                     >  1:1786587/1‑93 (MQ=255)
                        gggTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGtgtg                                                                  >  1:6402249/1‑93 (MQ=255)
                         ggTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTgc                                                                 >  1:1283066/1‑93 (MQ=255)
                         ggTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTgc                                                                 >  2:735582/1‑93 (MQ=255)
                         ggTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTgc                                                                 >  2:4148849/1‑93 (MQ=255)
                         ggTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTgc                                                                 >  2:7391356/1‑93 (MQ=255)
                           tttttATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTgcgc                                                               >  1:4231216/1‑93 (MQ=255)
                             tttATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTg                                                             <  1:5808888/93‑1 (MQ=255)
                              ttattaTAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGa                                                            <  2:3262031/93‑1 (MQ=255)
                               tattatAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGAt                                                           <  2:6623733/93‑1 (MQ=255)
                                attatAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATg                                                          >  1:2160524/1‑93 (MQ=255)
                                 ttatAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATgg                                                         >  1:6109934/1‑93 (MQ=255)
                                    taGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCag                                                      >  1:2702688/1‑93 (MQ=255)
                                    taGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCag                                                      <  1:3764559/93‑1 (MQ=255)
                                    taGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCag                                                      >  2:4553303/1‑93 (MQ=255)
                                      gAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCagag                                                    <  1:3442497/93‑1 (MQ=255)
                                      gAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCagag                                                    <  1:6224796/93‑1 (MQ=255)
                                      gAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCagag                                                    <  2:1704805/93‑1 (MQ=255)
                                      gAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCagag                                                    <  2:1901840/93‑1 (MQ=255)
                                        aaTAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTa                                                  <  1:1542141/93‑1 (MQ=255)
                                        aaTAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTa                                                  >  1:7816719/1‑93 (MQ=255)
                                        aaTAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTa                                                  >  1:3928567/1‑93 (MQ=255)
                                        aaTAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTa                                                  <  1:3565462/93‑1 (MQ=255)
                                         aTAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAg                                                 <  1:231755/93‑1 (MQ=255)
                                          tAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAgg                                                >  1:1019990/1‑93 (MQ=255)
                                          tAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAgg                                                >  1:3386697/1‑93 (MQ=255)
                                             gCAAAACTGATGGGAGAATTCTGAATTTTGGCCACGGACAATAAGCATGTAAGGATAATCAAACCTCGTGTGCGCTGATGGCAGAGTAGGTgg                                             >  1:3852950/1‑93 (MQ=255)
                                             gCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTgg                                             <  2:7305144/93‑1 (MQ=255)
                                             gCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTgg                                             <  1:2004376/93‑1 (MQ=255)
                                              cAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGggggg                                            >  2:3918603/1‑92 (MQ=255)
                                              cAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTgga                                            <  1:5454558/93‑1 (MQ=255)
                                               aaaaaTGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTggag                                           <  2:1505411/93‑1 (MQ=255)
                                                aaaaTGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTggagg                                          <  1:4868465/93‑1 (MQ=255)
                                                    tgatgGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTc                                      >  2:362045/1‑93 (MQ=255)
                                                     gatgGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTcc                                     <  1:6925667/93‑1 (MQ=255)
                                                     gatgGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTcc                                     <  2:1369154/93‑1 (MQ=255)
                                                       tgGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAg                                   <  1:2082996/93‑1 (MQ=255)
                                                       tgGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAg                                   <  2:4881479/93‑1 (MQ=255)
                                                        gggAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGa                                  <  1:4658813/93‑1 (MQ=255)
                                                        gggAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGa                                  <  1:2812519/93‑1 (MQ=255)
                                                          gagaATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACa                                >  2:284572/1‑93 (MQ=255)
                                                          gagaATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACa                                >  2:3452095/1‑93 (MQ=255)
                                                             aaTTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTc                             <  1:4819012/93‑1 (MQ=255)
                                                              aTTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCa                            <  1:1694886/93‑1 (MQ=255)
                                                              aTTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCa                            >  2:2903301/1‑93 (MQ=255)
                                                               ttCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCaa                           >  2:4409551/1‑93 (MQ=255)
                                                               ttCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCaa                           >  1:5726309/1‑93 (MQ=255)
                                                                 cTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAAc                         <  1:4455912/93‑1 (MQ=255)
                                                                 cTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAAc                         <  1:6533730/93‑1 (MQ=255)
                                                                   gAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGa                       <  2:7185296/93‑1 (MQ=255)
                                                                    aaTTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGAt                      <  2:5328767/93‑1 (MQ=255)
                                                                     aTTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATa                     <  1:4625661/93‑1 (MQ=255)
                                                                     aTTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATa                     <  2:1090342/93‑1 (MQ=255)
                                                                     aTTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATa                     >  1:4331006/1‑93 (MQ=255)
                                                                      ttttGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAg                    >  2:229463/1‑93 (MQ=255)
                                                                      ttttGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAg                    >  1:2428547/1‑93 (MQ=255)
                                                                       tttGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGa                   >  2:5153744/1‑93 (MQ=255)
                                                                       tttGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGa                   >  1:1901854/1‑93 (MQ=255)
                                                                           gCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGaaaaa               >  2:6877794/1‑93 (MQ=255)
                                                                           gCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGaaaaa               <  2:251237/93‑1 (MQ=255)
                                                                            ccACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAg              <  2:4683022/93‑1 (MQ=255)
                                                                              aCGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGAt            <  1:2554619/93‑1 (MQ=255)
                                                                              aCGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGAt            >  2:2143252/1‑93 (MQ=255)
                                                                                ggAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAg          >  1:958692/1‑93 (MQ=255)
                                                                                  aaaaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGcc        <  1:6724918/93‑1 (MQ=255)
                                                                                  aaaaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGcc        <  2:3019886/93‑1 (MQ=255)
                                                                                  aaaaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGcc        <  1:2467191/93‑1 (MQ=255)
                                                                                  aaaaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGcc        >  1:83733/1‑93 (MQ=255)
                                                                                  aaaaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGcc        >  2:4263925/1‑93 (MQ=255)
                                                                                   aaaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCt       >  1:764237/1‑93 (MQ=255)
                                                                                   aaaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCt       >  2:6179878/1‑93 (MQ=255)
                                                                                   aaaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCt       <  1:402946/93‑1 (MQ=255)
                                                                                    aaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCtt      <  1:712533/93‑1 (MQ=255)
                                                                                    aaTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCtt      >  1:5266794/1‑93 (MQ=255)
                                                                                     aTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCttt     <  1:7223364/93‑1 (MQ=255)
                                                                                     aTAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCttt     >  2:5912010/1‑93 (MQ=255)
                                                                                      tAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTa    <  2:7829863/93‑1 (MQ=255)
                                                                                      tAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTa    >  2:3734033/1‑93 (MQ=255)
                                                                                      tAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTa    >  1:409824/1‑93 (MQ=255)
                                                                                      tAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTa    <  1:111134/93‑1 (MQ=255)
                                                                                       aaGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTAt   >  2:5046396/1‑93 (MQ=255)
                                                                                       aaGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTAt   >  1:5591797/1‑93 (MQ=255)
                                                                                          |                                                                                          
TTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATG  >  NC_000913/3621325‑3621505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 211 total aligned reads displayed.
CCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATGGAG  >  NC_000913/3621322‑3621508
                                                                                             |                                                                                             
CCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGC                                                                                               >  SRR4302543.5403069/1‑94 (MQ=60)
 CATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCA                                                                                              <  SRR4302543.1021529/94‑1 (MQ=60)
 CATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCA                                                                                              <  SRR4302543.6349546/94‑1 (MQ=60)
 CATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCA                                                                                              >  SRR4302543.5116912/1‑94 (MQ=60)
 CATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCA                                                                                              >  SRR4302543.7078647/1‑94 (MQ=60)
  ATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCAT                                                                                             <  SRR4302543.5835077/94‑1 (MQ=60)
  ATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCAT                                                                                             <  SRR4302543.5402643/94‑1 (MQ=60)
  ATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCAT                                                                                             <  SRR4302543.5176733/94‑1 (MQ=60)
  ATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCAT                                                                                             <  SRR4302543.693111/94‑1 (MQ=60)
   TTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATG                                                                                            >  SRR4302543.6462912/1‑94 (MQ=60)
   TTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATG                                                                                            >  SRR4302543.6462913/1‑94 (MQ=60)
   TTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATG                                                                                            >  SRR4302543.6462914/1‑94 (MQ=60)
    TCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGT                                                                                           <  SRR4302543.2355396/94‑1 (MQ=60)
    TCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGT                                                                                           <  SRR4302543.5085573/94‑1 (MQ=60)
     CACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTA                                                                                          <  SRR4302543.1254202/94‑1 (MQ=60)
      ACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAA                                                                                         >  SRR4302543.7260123/1‑94 (MQ=60)
       CTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAG                                                                                        >  SRR4302543.2450934/1‑94 (MQ=60)
       CTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAG                                                                                        >  SRR4302543.338323/1‑94 (MQ=60)
       CTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAG                                                                                        <  SRR4302543.5050132/94‑1 (MQ=60)
       CTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAG                                                                                        <  SRR4302543.1583025/94‑1 (MQ=60)
        TCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGG                                                                                       >  SRR4302543.4081673/1‑94 (MQ=60)
         CAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTTGCCACGGAAAATAAGCATGTAAGGA                                                                                      >  SRR4302543.1084264/1‑94 (MQ=60)
          AGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGAT                                                                                     >  SRR4302543.2036691/1‑94 (MQ=60)
          AGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGAT                                                                                     <  SRR4302543.3274873/94‑1 (MQ=60)
          AGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGAT                                                                                     >  SRR4302543.8002160/1‑94 (MQ=60)
           GACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATA                                                                                    <  SRR4302543.6338130/94‑1 (MQ=60)
            ACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAA                                                                                   <  SRR4302543.7185502/94‑1 (MQ=60)
            ACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAA                                                                                   >  SRR4302543.2282817/1‑94 (MQ=60)
             CCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAAT                                                                                  <  SRR4302543.3679518/94‑1 (MQ=60)
             CCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAAT                                                                                  <  SRR4302543.2363334/94‑1 (MQ=60)
              CAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATC                                                                                 >  SRR4302543.3364736/1‑94 (MQ=60)
               AAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCA                                                                                <  SRR4302543.4814575/94‑1 (MQ=60)
               AAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCA                                                                                >  SRR4302543.6504547/1‑94 (MQ=60)
                AATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAA                                                                               <  SRR4302543.1417461/94‑1 (MQ=60)
                 ATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAA                                                                              <  SRR4302543.30583/94‑1 (MQ=60)
                 ATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAA                                                                              <  SRR4302543.3033864/94‑1 (MQ=60)
                  TTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAAC                                                                             <  SRR4302543.5766845/94‑1 (MQ=60)
                   TGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACA                                                                            <  SRR4302543.2693164/94‑1 (MQ=60)
                   TGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACA                                                                            <  SRR4302543.5102174/94‑1 (MQ=60)
                   TGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACA                                                                            <  SRR4302543.311724/94‑1 (MQ=60)
                   TGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACA                                                                            >  SRR4302543.4257671/1‑94 (MQ=60)
                    GCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACAT                                                                           >  SRR4302543.882582/1‑94 (MQ=60)
                    GCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACAT                                                                           >  SRR4302543.4038312/1‑94 (MQ=60)
                    GCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACAT                                                                           >  SRR4302543.4038528/1‑94 (MQ=60)
                     CTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATC                                                                          >  SRR4302543.3365592/1‑94 (MQ=60)
                      TGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCG                                                                         <  SRR4302543.6866054/94‑1 (MQ=60)
                       GGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGT                                                                        >  SRR4302543.1802565/1‑94 (MQ=60)
                        GTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTG                                                                       >  SRR4302543.4466344/1‑94 (MQ=60)
                        GTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTG                                                                       <  SRR4302543.4238864/94‑1 (MQ=60)
                        GTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTG                                                                       <  SRR4302543.6378518/94‑1 (MQ=60)
                         TGGTGCTTTTATTATTGAAACAGGCCAAGATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGT                                                                      <  SRR4302543.5192873/94‑1 (MQ=60)
                          GGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTG                                                                     <  SRR4302543.6137609/94‑1 (MQ=60)
                          GGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTG                                                                     >  SRR4302543.284654/1‑94 (MQ=60)
                           GGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGC                                                                    >  SRR4302543.1294506/1‑94 (MQ=60)
                            GGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCG                                                                   >  SRR4302543.1800743/1‑94 (MQ=60)
                            GGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCG                                                                   <  SRR4302543.474218/94‑1 (MQ=60)
                             GTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGC                                                                  >  SRR4302543.4269599/1‑94 (MQ=60)
                              TTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCT                                                                 >  SRR4302543.5548895/1‑94 (MQ=60)
                              TTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCT                                                                 >  SRR4302543.5548896/1‑94 (MQ=60)
                              TTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCT                                                                 >  SRR4302543.6474312/1‑94 (MQ=60)
                               TTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTG                                                                >  SRR4302543.4038420/1‑94 (MQ=60)
                                TTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGA                                                               <  SRR4302543.5861716/94‑1 (MQ=60)
                                TTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGA                                                               >  SRR4302543.394671/1‑94 (MQ=60)
                                 TTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGAT                                                              <  SRR4302543.4550096/94‑1 (MQ=60)
                                 TTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGAT                                                              <  SRR4302543.4444000/94‑1 (MQ=60)
                                 TTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGAT                                                              <  SRR4302543.6613867/94‑1 (MQ=60)
                                 TTATTATAGAAATAGGAAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGAT                                                              <  SRR4302543.4550097/94‑1 (MQ=60)
                                  TATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATG                                                             >  SRR4302543.2179877/1‑94 (MQ=60)
                                   ATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGG                                                            >  SRR4302543.2078309/1‑94 (MQ=60)
                                   ATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGG                                                            >  SRR4302543.2158964/1‑94 (MQ=60)
                                   ATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGG                                                            >  SRR4302543.6221067/1‑94 (MQ=60)
                                   ATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGG                                                            >  SRR4302543.4270502/1‑94 (MQ=60)
                                   ATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGG                                                            >  SRR4302543.6167816/1‑94 (MQ=60)
                                   ATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGG                                                            >  SRR4302543.6221068/1‑94 (MQ=60)
                                   ATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGG                                                            >  SRR4302543.702920/1‑94 (MQ=60)
                                   ATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGG                                                            >  SRR4302543.2487470/1‑94 (MQ=60)
                                      ATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAG                                                         <  SRR4302543.3824420/94‑1 (MQ=60)
                                      ATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAG                                                         >  SRR4302543.923693/1‑94 (MQ=60)
                                      ATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAG                                                         <  SRR4302543.2698571/94‑1 (MQ=60)
                                      ATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAG                                                         >  SRR4302543.4721322/1‑94 (MQ=60)
                                      ATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAG                                                         <  SRR4302543.6789670/94‑1 (MQ=60)
                                      ATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAG                                                         >  SRR4302543.2727208/1‑94 (MQ=60)
                                       TAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGA                                                        <  SRR4302543.3797693/94‑1 (MQ=60)
                                       TAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGA                                                        <  SRR4302543.4262464/94‑1 (MQ=60)
                                         GAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGT                                                      <  SRR4302543.6816211/94‑1 (MQ=60)
                                         GAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGT                                                      <  SRR4302543.3473318/94‑1 (MQ=60)
                                         GAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGT                                                      <  SRR4302543.3420628/94‑1 (MQ=60)
                                         GAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGT                                                      <  SRR4302543.6283555/94‑1 (MQ=60)
                                          AAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTA                                                     >  SRR4302543.2468760/1‑94 (MQ=60)
                                          AAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTA                                                     >  SRR4302543.7890372/1‑94 (MQ=60)
                                          AAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTA                                                     <  SRR4302543.3090356/94‑1 (MQ=60)
                                          AAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTA                                                     >  SRR4302543.3963241/1‑94 (MQ=60)
                                           AATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAG                                                    <  SRR4302543.2024698/94‑1 (MQ=60)
                                           AATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAG                                                    <  SRR4302543.790214/94‑1 (MQ=60)
                                           AATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAG                                                    <  SRR4302543.3597011/94‑1 (MQ=60)
                                           AATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAG                                                    <  SRR4302543.1555954/94‑1 (MQ=60)
                                            ATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGG                                                   >  SRR4302543.4330183/1‑94 (MQ=60)
                                            ATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGG                                                   <  SRR4302543.723939/94‑1 (MQ=60)
                                            ATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGG                                                   >  SRR4302543.1029016/1‑94 (MQ=60)
                                            ATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGG                                                   <  SRR4302543.233756/94‑1 (MQ=60)
                                              AGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTG                                                 <  SRR4302543.4189124/94‑1 (MQ=60)
                                               GGCAAAACTGATGGGAGAATTCTGAATTTTGGCCACGGACAATAAGCATGTAAGGATAATCAAACCTCGTGTGCGCTGATGGCAGAGTAGGTGG                                                >  SRR4302543.3886999/1‑94 (MQ=60)
                                               GGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGG                                                <  SRR4302543.3287157/94‑1 (MQ=60)
                                               GGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGG                                                <  SRR4302543.75013/94‑1 (MQ=60)
                                                GCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGA                                               <  SRR4302543.2022382/94‑1 (MQ=60)
                                                 CAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAG                                              <  SRR4302543.1978089/94‑1 (MQ=60)
                                                 CAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAG                                              <  SRR4302543.5504016/94‑1 (MQ=60)
                                                  AAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGG                                             <  SRR4302543.1737904/94‑1 (MQ=60)
                                                  AAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGG                                             >  SRR4302543.3170568/1‑94 (MQ=60)
                                                   AAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGA                                            <  SRR4302543.4912847/94‑1 (MQ=60)
                                                   AAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGA                                            <  SRR4302543.2333740/94‑1 (MQ=60)
                                                    AAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGAC                                           >  SRR4302543.7583608/1‑94 (MQ=60)
                                                    AAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGAC                                           >  SRR4302543.4906739/1‑94 (MQ=60)
                                                    AAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGAC                                           >  SRR4302543.5269023/1‑94 (MQ=60)
                                                    AAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGAC                                           <  SRR4302543.7936029/94‑1 (MQ=60)
                                                     AATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACT                                          >  SRR4302543.3744911/1‑94 (MQ=60)
                                                      ATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTC                                         >  SRR4302543.6670036/1‑94 (MQ=60)
                                                      ATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTC                                         >  SRR4302543.4605827/1‑94 (MQ=60)
                                                        GCTGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATaaagactccagggcgctcatgacacggcagggtggggccacca                                       >  SRR4302543.1667385/1‑51 (MQ=60)
                                                        GATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCA                                       >  SRR4302543.3387149/1‑94 (MQ=60)
                                                        GATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCA                                       <  SRR4302543.6990790/94‑1 (MQ=60)
                                                        GATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCA                                       >  SRR4302543.1667384/1‑94 (MQ=60)
                                                         ATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAG                                      >  SRR4302543.5837543/1‑94 (MQ=60)
                                                         ATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAG                                      <  SRR4302543.5382260/94‑1 (MQ=60)
                                                          TGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGA                                     <  SRR4302543.2101596/94‑1 (MQ=60)
                                                          TGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGGAGGGGGAGGACTCCAGC                                     >  SRR4302543.4221295/1‑94 (MQ=60)
                                                           GGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGAC                                    <  SRR4302543.1396584/94‑1 (MQ=60)
                                                           GGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGAC                                    <  SRR4302543.2838280/94‑1 (MQ=60)
                                                           GGGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGAC                                    <  SRR4302543.4701245/94‑1 (MQ=60)
                                                            GGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACA                                   >  SRR4302543.3756579/1‑94 (MQ=60)
                                                            GGAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACA                                   <  SRR4302543.5830989/94‑1 (MQ=60)
                                                             GAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAG                                  <  SRR4302543.4104734/94‑1 (MQ=60)
                                                             GAGAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAG                                  <  SRR4302543.6554256/94‑1 (MQ=60)
                                                               GAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTC                                <  SRR4302543.4878247/94‑1 (MQ=60)
                                                               GAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTC                                <  SRR4302543.3520858/94‑1 (MQ=60)
                                                               GAATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTC                                >  SRR4302543.3434987/1‑94 (MQ=60)
                                                                AATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCA                               <  SRR4302543.4671371/94‑1 (MQ=60)
                                                                AATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCA                               <  SRR4302543.4863012/94‑1 (MQ=60)
                                                                AATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCA                               <  SRR4302543.4671372/94‑1 (MQ=60)
                                                                 ATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAA                              >  SRR4302543.3794048/1‑94 (MQ=60)
                                                                 ATTCTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAA                              >  SRR4302543.5778560/1‑94 (MQ=60)
                                                                    CTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACG                           <  SRR4302543.4496274/94‑1 (MQ=60)
                                                                    CTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACG                           <  SRR4302543.3503177/94‑1 (MQ=60)
                                                                    CTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACG                           <  SRR4302543.6595239/94‑1 (MQ=60)
                                                                    CTGAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACG                           <  SRR4302543.1894123/94‑1 (MQ=60)
                                                                      GAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGAT                         <  SRR4302543.435117/94‑1 (MQ=60)
                                                                      GAATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGAT                         <  SRR4302543.1222276/94‑1 (MQ=60)
                                                                        ATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAG                       <  SRR4302543.4667686/94‑1 (MQ=60)
                                                                        ATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAG                       <  SRR4302543.6020634/94‑1 (MQ=60)
                                                                        ATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAG                       <  SRR4302543.2515792/94‑1 (MQ=60)
                                                                        ATTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAG                       >  SRR4302543.2450463/1‑94 (MQ=60)
                                                                         TTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGA                      >  SRR4302543.1918966/1‑94 (MQ=60)
                                                                         TTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGA                      <  SRR4302543.7826466/94‑1 (MQ=60)
                                                                         TTTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGA                      <  SRR4302543.7826465/94‑1 (MQ=60)
                                                                          TTTGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAA                     >  SRR4302543.1825906/1‑94 (MQ=60)
                                                                            TGGCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAA                   >  SRR4302543.637271/1‑94 (MQ=60)
                                                                              GCCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAG                 >  SRR4302543.3019001/1‑94 (MQ=60)
                                                                               CCACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGA                >  SRR4302543.2151085/1‑94 (MQ=60)
                                                                                CACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGAT               <  SRR4302543.3622972/94‑1 (MQ=60)
                                                                                 ACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATA              <  SRR4302543.2577972/94‑1 (MQ=60)
                                                                                 ACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATA              <  SRR4302543.1847545/94‑1 (MQ=60)
                                                                                 ACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATA              <  SRR4302543.5949114/94‑1 (MQ=60)
                                                                                 ACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATA              <  SRR4302543.5345142/94‑1 (MQ=60)
                                                                                 ACGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATA              <  SRR4302543.5294639/94‑1 (MQ=60)
                                                                                  CGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAG             >  SRR4302543.5691866/1‑94 (MQ=60)
                                                                                  CGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAG             <  SRR4302543.3612747/94‑1 (MQ=60)
                                                                                  CGGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAG             <  SRR4302543.3350563/94‑1 (MQ=60)
                                                                                   GGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGC            >  SRR4302543.3192514/1‑94 (MQ=60)
                                                                                   GGAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGC            >  SRR4302543.3192515/1‑94 (MQ=60)
                                                                                    GAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCC           >  SRR4302543.84508/1‑94 (MQ=60)
                                                                                    GAAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCC           <  SRR4302543.3539280/94‑1 (MQ=60)
                                                                                     AAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCT          <  SRR4302543.2489459/94‑1 (MQ=60)
                                                                                     AAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCT          <  SRR4302543.6788457/94‑1 (MQ=60)
                                                                                     AAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCT          >  SRR4302543.770965/1‑94 (MQ=60)
                                                                                     AAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCT          <  SRR4302543.2489461/94‑1 (MQ=60)
                                                                                     AAAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCT          >  SRR4302543.1240732/1‑94 (MQ=60)
                                                                                      AAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTT         <  SRR4302543.1999483/94‑1 (MQ=60)
                                                                                      AAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTT         <  SRR4302543.406668/94‑1 (MQ=60)
                                                                                      AAATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTT         >  SRR4302543.5314312/1‑94 (MQ=60)
                                                                                       AATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTT        <  SRR4302543.2771560/94‑1 (MQ=60)
                                                                                       AATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTT        <  SRR4302543.718996/94‑1 (MQ=60)
                                                                                        ATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTT       >  SRR4302543.5431494/1‑94 (MQ=60)
                                                                                        ATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTA       >  SRR4302543.413610/1‑94 (MQ=60)
                                                                                        ATAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTA       <  SRR4302543.7293367/94‑1 (MQ=60)
                                                                                         agAGTATGTAAGGATAATCAAACATCGTGGACGGTGATGACAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTAT      <  SRR4302543.422365/92‑1 (MQ=60)
                                                                                         TAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTAT      <  SRR4302543.112144/94‑1 (MQ=60)
                                                                                         TAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTAT      <  SRR4302543.2642982/94‑1 (MQ=60)
                                                                                         TAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTAT      <  SRR4302543.1564551/94‑1 (MQ=60)
                                                                                         TAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTAT      >  SRR4302543.5642735/1‑94 (MQ=60)
                                                                                         TAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTAT      <  SRR4302543.2973850/94‑1 (MQ=60)
                                                                                         TAAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTAT      <  SRR4302543.3833516/94‑1 (MQ=60)
                                                                                          AAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATG     <  SRR4302543.7546520/94‑1 (MQ=60)
                                                                                          AAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATG     >  SRR4302543.1627818/1‑94 (MQ=60)
                                                                                          AAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATG     >  SRR4302543.2334015/1‑94 (MQ=60)
                                                                                          AAGCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATG     <  SRR4302543.3807208/94‑1 (MQ=60)
                                                                                           AGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATGG    <  SRR4302543.1094972/94‑1 (MQ=60)
                                                                                            GCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATGGA   <  SRR4302543.1605220/94‑1 (MQ=60)
                                                                                            GCATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATGGA   >  SRR4302543.1050901/1‑94 (MQ=60)
                                                                                             CATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATGGAG  <  SRR4302543.6738626/94‑1 (MQ=60)
                                                                                             CATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATGGAG  >  SRR4302543.589669/1‑94 (MQ=60)
                                                                                             |                                                                                             
CCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGTAGGTGGAGGACTCCAGACAGTCAAACGATAGAAAAAGATAGCCTTTATGGAG  >  NC_000913/3621322‑3621508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑