Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,623,435	T→C	I334V (ATC→GTC)	b3485 ←	putative transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,623,435	0	T	C	100.0%	1257.7 / NA	400	I334V (ATC→GTC)	b3485	putative transporter
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (199/201); total (199/201)

Only 100 of 409 total aligned reads displayed.

GCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAAC  >  NC_000913/3623345‑3623524

gcagcGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACgg                                                                                         <  2:5951865/93‑1 (MQ=255)

 cagcGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGc                                                                                        <  1:1204658/93‑1 (MQ=255)

 cagcGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGc                                                                                        <  1:6332831/93‑1 (MQ=255)

     gcAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgg                                                                                    >  1:3253704/1‑92 (MQ=255)

     gcAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgc                                                                                    >  1:3105917/1‑93 (MQ=255)

      cAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgcg                                                                                   >  2:6050379/1‑93 (MQ=255)

       aaTGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgcgc                                                                                  >  2:4317616/1‑93 (MQ=255)

       aaTGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgcgc                                                                                  >  1:5638381/1‑93 (MQ=255)

        aTGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGcgcg                                                                                 >  1:355678/1‑93 (MQ=255)

        aTGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGcgcg                                                                                 >  2:3279209/1‑93 (MQ=255)

          ggTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAg                                                                               >  1:5315462/1‑93 (MQ=255)

              aaaaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTa                                                                           <  1:4089063/93‑1 (MQ=255)

               aaaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTaa                                                                          >  1:749039/1‑93 (MQ=255)

               aaaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTaa                                                                          >  1:6980256/1‑93 (MQ=255)

                aaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAAc                                                                         <  1:6493449/93‑1 (MQ=255)

                aaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAAc                                                                         <  2:2085081/93‑1 (MQ=255)

                  aTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACaa                                                                       >  1:7049577/1‑93 (MQ=255)

                   tGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACaaa                                                                      >  2:7227347/1‑93 (MQ=255)

                   agcgcCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACaaa                                                                      <  1:2151007/92‑1 (MQ=255)

                    gcgcCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAg                                                                     <  2:2410757/93‑1 (MQ=255)

                      gccgccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGCGGACGGCCTGGGCGCGGCTAGCAAAgtg                                                                   >  1:2105728/1‑93 (MQ=255)

                       ccgccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAgtgt                                                                  >  2:2487340/1‑93 (MQ=255)

                        cgccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAgtgtg                                                                 >  2:3520275/1‑93 (MQ=255)

                        cgccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAgtgtg                                                                 >  1:6794514/1‑93 (MQ=255)

                         gccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAgtgtgt                                                                <  1:805487/93‑1 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               >  2:4456735/1‑93 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               <  1:864874/93‑1 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               >  2:2722032/1‑93 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               <  2:6687483/93‑1 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               <  2:5602560/93‑1 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAAAAAAGTGTgtc                                                               >  1:3630159/1‑93 (MQ=255)

                            aaTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtcgt                                                             >  1:4446680/1‑93 (MQ=255)

                            aaTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtcgt                                                             >  2:2667533/1‑93 (MQ=255)

                            aaTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtcgt                                                             >  1:600501/1‑93 (MQ=255)

                             aTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtcgtc                                                            >  1:7686603/1‑93 (MQ=255)

                              ttGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGtcgtcg                                                           >  2:7415688/1‑93 (MQ=255)

                              ttGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGtcgtcg                                                           >  1:2437716/1‑93 (MQ=255)

                               tGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCgg                                                          <  2:1575397/93‑1 (MQ=255)

                               tGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCgg                                                          >  2:4147278/1‑93 (MQ=255)

                                  cATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCAt                                                       <  1:1137500/93‑1 (MQ=255)

                                   aTCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATg                                                      >  1:4504269/1‑93 (MQ=255)

                                   aTCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATg                                                      >  2:7553362/1‑93 (MQ=255)

                                    tCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATgt                                                     >  1:4199287/1‑92 (MQ=255)

                                    tCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATgg                                                     >  2:5483238/1‑93 (MQ=255)

                                    tCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATgg                                                     >  2:5752926/1‑93 (MQ=255)

                                    acAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATgg                                                     <  1:5763289/92‑1 (MQ=255)

                                     cAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGt                                                    >  2:5199997/1‑93 (MQ=255)

                                     cAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGt                                                    <  2:4788673/93‑1 (MQ=255)

                                     cAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGt                                                    <  2:6826360/93‑1 (MQ=255)

                                       gCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTcg                                                  >  1:7082353/1‑92 (MQ=255)

                                       gCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCa                                                  >  2:6898730/1‑93 (MQ=255)

                                       gCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCa                                                  <  2:1200709/93‑1 (MQ=255)

                                       gCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCa                                                  <  1:4980913/93‑1 (MQ=255)

                                          tCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCa                                               <  2:814530/93‑1 (MQ=255)

                                          tCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCa                                               >  1:1552819/1‑93 (MQ=255)

                                          gcAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCa                                               >  2:7025690/2‑93 (MQ=255)

                                           cAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCAt                                              <  2:3677670/93‑1 (MQ=255)

                                            aGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATa                                             >  1:2792328/1‑93 (MQ=255)

                                            aGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATa                                             <  1:1747820/93‑1 (MQ=255)

                                             gAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATaa                                            >  2:7119104/1‑93 (MQ=255)

                                             gAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATaa                                            >  2:5120678/1‑93 (MQ=255)

                                             gAAACTGCGGCCAGACGATTGCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGCGTCGTCGGCATGGTCAGAATaa                                            <  2:1486014/93‑1 (MQ=255)

                                              aaaCTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAAt                                           <  1:3900966/93‑1 (MQ=255)

                                                   gCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCt                                      >  1:348426/1‑93 (MQ=255)

                                                    cGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTg                                     >  2:2209969/1‑93 (MQ=255)

                                                     ggCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGc                                    >  2:3362907/1‑93 (MQ=255)

                                                     ggCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGc                                    >  1:4753806/1‑93 (MQ=255)

                                                       ccAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCAc                                  >  2:3100147/1‑93 (MQ=255)

                                                       ccAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGGGTGTCGTCGGCATGGTCAGCGTAATCTCCTGCAc                                  >  1:1926479/1‑93 (MQ=255)

                                                         aGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCa                                >  2:4034173/1‑93 (MQ=255)

                                                           aCGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATc                              <  2:3818695/93‑1 (MQ=255)

                                                            cGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCt                             >  2:1115833/1‑93 (MQ=255)

                                                            cGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCt                             <  1:4009652/93‑1 (MQ=255)

                                                             gATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTAAGCATAATGTCCTGCACCATCTg                            >  2:5394511/1‑93 (MQ=255)

                                                              aTTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc                           >  2:6517432/1‑93 (MQ=255)

                                                              aTTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc                           <  2:2932641/93‑1 (MQ=255)

                                                              aTTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc                           >  1:2664241/1‑93 (MQ=255)

                                                              aTTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc                           <  1:1858465/93‑1 (MQ=255)

                                                                  cGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCa                       <  2:6309579/93‑1 (MQ=255)

                                                                    aaTCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCAtc                     >  2:1867069/1‑92 (MQ=255)

                                                                    aaTCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATa                     <  2:3955905/93‑1 (MQ=255)

                                                                    aaTCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATa                     >  2:7626882/1‑93 (MQ=255)

                                                                      tCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACt                   <  2:202559/93‑1 (MQ=255)

                                                                         ggCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTc                >  1:2904263/1‑93 (MQ=255)

                                                                         ggCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTc                <  2:5331651/93‑1 (MQ=255)

                                                                             ccccGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTcgcgc            <  1:4641807/93‑1 (MQ=255)

                                                                               ccGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcgg          >  1:2480396/1‑93 (MQ=255)

                                                                                cGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggc         <  1:7831409/93‑1 (MQ=255)

                                                                                cGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggc         <  1:978555/93‑1 (MQ=255)

                                                                                cGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggc         <  2:2550144/93‑1 (MQ=255)

                                                                                 ggTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggcg        >  1:1363365/1‑93 (MQ=255)

                                                                                  gTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggcgg       >  1:7287747/1‑92 (MQ=255)

                                                                                   tAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTg      >  1:5254286/1‑93 (MQ=255)

                                                                                     gagGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGa    >  1:3792245/1‑93 (MQ=255)

                                                                                     gagGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGa    >  2:4194259/1‑93 (MQ=255)

                                                                                     gagGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGa    >  2:7069476/1‑93 (MQ=255)

                                                                                      agGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGaa   >  1:1043883/1‑93 (MQ=255)

                                                                                      agGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGaa   >  2:4933024/1‑93 (MQ=255)

                                                                                      agGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGaa   <  2:1756490/93‑1 (MQ=255)

                                                                                       ggACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAac  <  2:1305846/93‑1 (MQ=255)

GCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAAC  >  NC_000913/3623345‑3623524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 211 total aligned reads displayed.

GCAGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAACCAC  >  NC_000913/3623342‑3623527

GCAGCAGCGCAATGGTG‑AAAAATGCTCCGCCAATTACCATCAGCGTCATAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGAC                                                                                              <  SRR4302543.1050408/94‑1 (MQ=60)

GCAGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGAC                                                                                              <  SRR4302543.1050407/94‑1 (MQ=60)

GCAGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGAC                                                                                              <  SRR4302543.821490/94‑1 (MQ=60)

 CAGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACG                                                                                             <  SRR4302543.851709/94‑1 (MQ=60)

  AGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGG                                                                                            <  SRR4302543.4763001/94‑1 (MQ=60)

  AGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGG                                                                                            <  SRR4302543.3407527/94‑1 (MQ=60)

  AGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGG                                                                                            <  SRR4302543.5838420/94‑1 (MQ=60)

  AGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGG                                                                                            <  SRR4302543.2598607/94‑1 (MQ=60)

  AGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGG                                                                                            >  SRR4302543.2470648/1‑94 (MQ=60)

    CAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCC                                                                                          <  SRR4302543.6392388/94‑1 (MQ=60)

    CAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCC                                                                                          <  SRR4302543.6392387/94‑1 (MQ=60)

    CAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCC                                                                                          <  SRR4302543.1215500/94‑1 (MQ=60)

     AGCGCAATGGTGAAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCGAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCC                                                                                          >  SRR4302543.5737548/1‑94 (MQ=60)

     AGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCT                                                                                         <  SRR4302543.4807590/94‑1 (MQ=60)

     AGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCT                                                                                         <  SRR4302543.7393604/94‑1 (MQ=60)

     AGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCT                                                                                         <  SRR4302543.4538685/94‑1 (MQ=60)

      GCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTG                                                                                        >  SRR4302543.1149055/1‑94 (MQ=60)

      GCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTG                                                                                        <  SRR4302543.5570774/94‑1 (MQ=60)

       CGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGG                                                                                       >  SRR4302543.3283119/1‑94 (MQ=60)

       CGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGC                                                                                       >  SRR4302543.3133857/1‑94 (MQ=60)

        GCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCG                                                                                      <  SRR4302543.4496839/94‑1 (MQ=60)

        GCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCG                                                                                      >  SRR4302543.7903806/1‑94 (MQ=60)

         CAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGC                                                                                     >  SRR4302543.5689778/1‑94 (MQ=60)

          AATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCG                                                                                    >  SRR4302543.358964/1‑94 (MQ=60)

          AATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCG                                                                                    >  SRR4302543.7563090/1‑94 (MQ=60)

            TGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAG                                                                                  <  SRR4302543.3687749/94‑1 (MQ=60)

            TGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAG                                                                                  >  SRR4302543.5363483/1‑94 (MQ=60)

             GGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGG                                                                                 <  SRR4302543.7374450/94‑1 (MQ=60)

             GGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGG                                                                                 <  SRR4302543.7122823/94‑1 (MQ=60)

             GGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGG                                                                                 >  SRR4302543.1195312/1‑94 (MQ=60)

               TG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCT                                                                               >  SRR4302543.3639018/1‑94 (MQ=60)

                  AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAA                                                                             >  SRR4302543.755690/1‑94 (MQ=60)

                  AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAA                                                                             <  SRR4302543.4125736/94‑1 (MQ=60)

                  AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAA                                                                             >  SRR4302543.7131484/1‑94 (MQ=60)

                  AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAA                                                                             >  SRR4302543.7045947/1‑94 (MQ=60)

                   AAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAAC                                                                            >  SRR4302543.5841058/1‑94 (MQ=60)

                   AAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAAC                                                                            >  SRR4302543.6015848/1‑94 (MQ=60)

                    AAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACA                                                                           >  SRR4302543.2715951/1‑94 (MQ=60)

                    AAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACA                                                                           <  SRR4302543.6554623/94‑1 (MQ=60)

                    AAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACA                                                                           >  SRR4302543.5449386/1‑94 (MQ=60)

                     AATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAA                                                                          >  SRR4302543.7117976/1‑94 (MQ=60)

                       TGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAG                                                                        <  SRR4302543.3844636/94‑1 (MQ=60)

                       AGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAG                                                                        <  SRR4302543.2170269/94‑1 (MQ=60)

                        GCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGT                                                                       <  SRR4302543.37982/94‑1 (MQ=60)

                        GCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGT                                                                       <  SRR4302543.1806988/94‑1 (MQ=60)

                         CGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGCGGACGGCCTGGGCGCGGCTAGCAAAGTG                                                                      >  SRR4302543.2124568/1‑94 (MQ=60)

                         CGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGCCGCCCTGCGCGAGGCTAACAAAGTG                                                                      >  SRR4302543.1991945/1‑94 (MQ=60)

                         CGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTG                                                                      >  SRR4302543.2196197/1‑94 (MQ=60)

                         CGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTG                                                                      >  SRR4302543.3832576/1‑94 (MQ=60)

                         CGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTG                                                                      >  SRR4302543.2124565/1‑94 (MQ=60)

                          GCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGT                                                                     <  SRR4302543.2831245/94‑1 (MQ=60)

                           CCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTG                                                                    >  SRR4302543.6858672/1‑94 (MQ=60)

                           CCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTG                                                                    <  SRR4302543.929098/94‑1 (MQ=60)

                           CCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTG                                                                    >  SRR4302543.1325546/1‑94 (MQ=60)

                            CGCCAATTGCCATCAGCGTCAGAAGCTGCGCCCAGACGATTACGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGT                                                                   <  SRR4302543.1080384/94‑1 (MQ=60)

                            CGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGT                                                                   <  SRR4302543.1278117/94‑1 (MQ=60)

                            CGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGT                                                                   >  SRR4302543.7008072/1‑94 (MQ=60)

                             GCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTC                                                                  >  SRR4302543.4685575/1‑94 (MQ=60)

                             GCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTC                                                                  <  SRR4302543.812573/94‑1 (MQ=60)

                             GCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTC                                                                  >  SRR4302543.1079130/1‑94 (MQ=60)

                             GCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTC                                                                  <  SRR4302543.6452780/94‑1 (MQ=60)

                             GCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAAAAAAGTGTGTC                                                                  >  SRR4302543.3662120/1‑94 (MQ=60)

                              CCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCG                                                                 <  SRR4302543.872607/94‑1 (MQ=60)

                              CCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCG                                                                 >  SRR4302543.7179085/1‑94 (MQ=60)

                              CCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCG                                                                 >  SRR4302543.6218060/1‑94 (MQ=60)

                              CCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCG                                                                 >  SRR4302543.705213/1‑94 (MQ=60)

                               CAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGT                                                                >  SRR4302543.1735028/1‑94 (MQ=60)

                               CAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGT                                                                <  SRR4302543.4140022/94‑1 (MQ=60)

                               CAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGT                                                                >  SRR4302543.4486959/1‑94 (MQ=60)

                               CAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGT                                                                >  SRR4302543.8000135/1‑94 (MQ=60)

                               CAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGT                                                                >  SRR4302543.606000/1‑94 (MQ=60)

                               CAATCGCCATCAGCGTGAGACACTCCGGCCAGAGTATTTCTAATCCGGCCCCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGT                                                                <  SRR4302543.4140029/94‑1 (MQ=53)

                                AATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTC                                                               <  SRR4302543.775288/94‑1 (MQ=60)

                                AATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTC                                                               >  SRR4302543.7759395/1‑94 (MQ=60)

                                AATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTC                                                               >  SRR4302543.5712148/1‑94 (MQ=60)

                                 ATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCG                                                              >  SRR4302543.2459697/1‑94 (MQ=60)

                                   TGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGC                                                            <  SRR4302543.2467811/94‑1 (MQ=60)

                                   TGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGC                                                            <  SRR4302543.4239042/94‑1 (MQ=60)

                                   TGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGC                                                            <  SRR4302543.1781342/94‑1 (MQ=60)

                                    GCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCA                                                           >  SRR4302543.1894770/1‑94 (MQ=60)

                                    GCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCA                                                           >  SRR4302543.464397/1‑94 (MQ=60)

                                    GCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCA                                                           <  SRR4302543.939561/94‑1 (MQ=60)

                                     CCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCAT                                                          <  SRR4302543.2905973/94‑1 (MQ=60)

                                     CCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCAT                                                          >  SRR4302543.590885/1‑94 (MQ=60)

                                     CCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCAT                                                          >  SRR4302543.3102629/1‑94 (MQ=60)

                                     CCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCAG                                                          >  SRR4302543.6222885/1‑94 (MQ=60)

                                      CATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATG                                                         >  SRR4302543.4545220/1‑94 (MQ=60)

                                      CATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATG                                                         <  SRR4302543.3593320/94‑1 (MQ=60)

                                      CATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATG                                                         <  SRR4302543.1147841/94‑1 (MQ=60)

                                      CATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATG                                                         <  SRR4302543.3284100/94‑1 (MQ=60)

                                      CATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATG                                                         >  SRR4302543.2517879/1‑94 (MQ=60)

                                      CATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATG                                                         <  SRR4302543.1147839/94‑1 (MQ=60)

                                       ATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGT                                                        >  SRR4302543.4237359/1‑94 (MQ=60)

                                       ATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGG                                                        >  SRR4302543.4146009/1‑94 (MQ=60)

                                       ATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGG                                                        >  SRR4302543.6139743/1‑94 (MQ=60)

                                       ATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGG                                                        >  SRR4302543.2543884/1‑94 (MQ=60)

                                        TCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGT                                                       <  SRR4302543.4021609/94‑1 (MQ=60)

                                        ACAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGT                                                       <  SRR4302543.5815786/94‑1 (MQ=60)

                                          AGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCG                                                     >  SRR4302543.7151133/1‑94 (MQ=60)

                                          AGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCA                                                     >  SRR4302543.67516/1‑94 (MQ=60)

                                          AGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCA                                                     >  SRR4302543.5023558/1‑94 (MQ=60)

                                          AGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGACGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCA                                                     >  SRR4302543.3557582/1‑94 (MQ=60)

                                           GCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAG                                                    <  SRR4302543.1297522/94‑1 (MQ=60)

                                           GCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAG                                                    <  SRR4302543.5026252/94‑1 (MQ=60)

                                           GCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAG                                                    <  SRR4302543.4991329/94‑1 (MQ=60)

                                            CGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGC                                                   >  SRR4302543.4045614/1‑94 (MQ=60)

                                             GTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACACAGTGTGTCGTCGGCATGGTCAGCA                                                  >  SRR4302543.1087685/1‑94 (MQ=60)

                                             GTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCA                                                  >  SRR4302543.7184795/1‑94 (MQ=60)

                                             GTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCA                                                  <  SRR4302543.7323819/94‑1 (MQ=60)

                                              TCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCAT                                                 <  SRR4302543.580481/94‑1 (MQ=60)

                                              TCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCAT                                                 <  SRR4302543.4567290/94‑1 (MQ=60)

                                               CAGAAACTGCGGCCAGACGATTTCGAATCCGTCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATA                                                <  SRR4302543.649185/94‑1 (MQ=60)

                                               CAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATA                                                <  SRR4302543.3057418/94‑1 (MQ=60)

                                               CAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATA                                                >  SRR4302543.3650510/1‑94 (MQ=60)

                                               CAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATA                                                >  SRR4302543.2817830/1‑94 (MQ=60)

                                               CAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATA                                                <  SRR4302543.2575988/94‑1 (MQ=60)

                                               CAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATA                                                >  SRR4302543.5035774/1‑94 (MQ=60)

                                                AGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAA                                               >  SRR4302543.3245385/1‑94 (MQ=60)

                                                AGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAA                                               <  SRR4302543.1763429/94‑1 (MQ=60)

                                                 GAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAAT                                              <  SRR4302543.813002/94‑1 (MQ=60)

                                                 GAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAAT                                              <  SRR4302543.1518224/94‑1 (MQ=60)

                                                 GAAACTCCGGCCAGACGATTTCGAATCCGGCTCCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAAT                                              <  SRR4302543.813001/94‑1 (MQ=60)

                                                  AAACTGCGGCCAGACGATTTCGAGTCCGGCACCCCGGTAGAGGACGGCCTGCGTGCGGCTAACAACGTGTGgcgttgggatgggcggcacatcg                                             >  SRR4302543.3880769/1‑71 (MQ=60)

                                                  AAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATG                                             <  SRR4302543.3935411/94‑1 (MQ=60)

                                                  AAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATG                                             >  SRR4302543.3880770/1‑94 (MQ=60)

                                                     CTGCGGCCAGACGATATCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCC                                          <  SRR4302543.7080121/94‑1 (MQ=60)

                                                      TGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCT                                         >  SRR4302543.2927193/1‑94 (MQ=60)

                                                      TGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCT                                         >  SRR4302543.3750639/1‑94 (MQ=60)

                                                       GCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTG                                        <  SRR4302543.187889/94‑1 (MQ=60)

                                                       GCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTG                                        <  SRR4302543.187888/94‑1 (MQ=60)

                                                        CGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGC                                       >  SRR4302543.4797252/1‑94 (MQ=60)

                                                         GGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCA                                      <  SRR4302543.4152990/94‑1 (MQ=60)

                                                         GGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCA                                      <  SRR4302543.1797309/94‑1 (MQ=60)

                                                          GCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGGGTGTCGTCGGCATGGTCAGCGTAATCTCCTGCAC                                     >  SRR4302543.1943830/1‑94 (MQ=60)

                                                           CCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACC                                    >  SRR4302543.7793607/1‑94 (MQ=60)

                                                           CCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACC                                    >  SRR4302543.2260174/1‑94 (MQ=60)

                                                           CCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACC                                    >  SRR4302543.4421160/1‑94 (MQ=60)

                                                            CAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGTGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCA                                   >  SRR4302543.977054/1‑94 (MQ=60)

                                                            CAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGgcttgcacat                                   >  SRR4302543.2489216/1‑84 (MQ=60)

                                                            CAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCA                                   <  SRR4302543.7142587/94‑1 (MQ=60)

                                                            CAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCA                                   >  SRR4302543.7919707/1‑94 (MQ=60)

                                                            CAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCA                                   >  SRR4302543.3396602/1‑94 (MQ=60)

                                                            CAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCA                                   >  SRR4302543.4768803/1‑94 (MQ=60)

                                                             AGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCAT                                  >  SRR4302543.5344062/1‑94 (MQ=60)

                                                               ACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCT                                <  SRR4302543.2680144/94‑1 (MQ=60)

                                                               ACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCT                                <  SRR4302543.7951792/94‑1 (MQ=60)

                                                               ACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCT                                <  SRR4302543.5357290/94‑1 (MQ=60)

                                                                CGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTG                               <  SRR4302543.4045451/94‑1 (MQ=60)

                                                                CGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTG                               <  SRR4302543.4045450/94‑1 (MQ=60)

                                                                CGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGAGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTG                               >  SRR4302543.1136936/1‑94 (MQ=60)

                                                                 GATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGC                              >  SRR4302543.2688395/1‑94 (MQ=60)

                                                                  ATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCG                             <  SRR4302543.6969637/94‑1 (MQ=60)

                                                                  ATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCG                             <  SRR4302543.1875166/94‑1 (MQ=60)

                                                                  ATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCG                             >  SRR4302543.7368577/1‑94 (MQ=60)

                                                                     TCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCA                          >  SRR4302543.4602785/1‑94 (MQ=60)

                                                                       GAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATA                        <  SRR4302543.2141880/94‑1 (MQ=60)

                                                                         ATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACT                      >  SRR4302543.3218335/1‑94 (MQ=60)

                                                                         ATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACT                      >  SRR4302543.2169231/1‑94 (MQ=60)

                                                                         ATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACT                      <  SRR4302543.158912/94‑1 (MQ=60)

                                                                          TCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTT                     <  SRR4302543.7324138/94‑1 (MQ=60)

                                                                          TCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTT                     <  SRR4302543.7029372/94‑1 (MQ=60)

                                                                            CGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTC                   <  SRR4302543.5178577/94‑1 (MQ=60)

                                                                            CGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTC                   >  SRR4302543.2930667/1‑94 (MQ=60)

                                                                            CGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTC                   <  SRR4302543.5178575/94‑1 (MQ=60)

                                                                             GGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCG                  <  SRR4302543.771579/94‑1 (MQ=60)

                                                                             GGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCG                  <  SRR4302543.1420842/94‑1 (MQ=60)

                                                                               CACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCG                >  SRR4302543.3022462/1‑94 (MQ=60)

                                                                               CACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCG                <  SRR4302543.584991/94‑1 (MQ=60)

                                                                               CACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCG                >  SRR4302543.6814600/1‑94 (MQ=60)

                                                                               CACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCG                >  SRR4302543.3275488/1‑94 (MQ=60)

                                                                               CACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCG                >  SRR4302543.336406/1‑94 (MQ=60)

                                                                                CCCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGC               <  SRR4302543.2188015/94‑1 (MQ=60)

                                                                                 CCCCGGTAGAGTACGGCCTGCGCGAGTCTAACAACGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCG              <  SRR4302543.4075348/94‑1 (MQ=60)

                                                                                 CCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCG              <  SRR4302543.4075346/94‑1 (MQ=60)

                                                                                 CCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCG              <  SRR4302543.4735148/94‑1 (MQ=60)

                                                                                 CCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCG              <  SRR4302543.860377/94‑1 (MQ=60)

                                                                                 CCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCG              <  SRR4302543.4684032/94‑1 (MQ=60)

                                                                                  CCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGG             >  SRR4302543.7831102/1‑94 (MQ=60)

                                                                                  CCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGG             <  SRR4302543.4062217/94‑1 (MQ=60)

                                                                                  CCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGG             >  SRR4302543.2502839/1‑94 (MQ=60)

                                                                                  CCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGG             <  SRR4302543.6708088/94‑1 (MQ=60)

                                                                                   CCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGC            <  SRR4302543.7950191/94‑1 (MQ=60)

                                                                                    CGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCG           <  SRR4302543.7905145/94‑1 (MQ=60)

                                                                                    CGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCG           >  SRR4302543.1375580/1‑94 (MQ=60)

                                                                                     GGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGT          >  SRR4302543.3520694/1‑94 (MQ=60)

                                                                                     GGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGG          >  SRR4302543.7358100/1‑94 (MQ=60)

                                                                                      GTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTG         <  SRR4302543.2114175/94‑1 (MQ=60)

                                                                                      GTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTG         >  SRR4302543.5301672/1‑94 (MQ=60)

                                                                                      GTAGAGGACGCCCTGCGCGAGGCTCACAAAGTGTGTCGACGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTG         <  SRR4302543.5427064/94‑1 (MQ=60)

                                                                                        AGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGA       >  SRR4302543.2762947/1‑94 (MQ=60)

                                                                                        AGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGA       >  SRR4302543.3825654/1‑94 (MQ=60)

                                                                                         GAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGCA      >  SRR4302543.16878/1‑94 (MQ=60)

                                                                                         GAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAA      >  SRR4302543.1053192/1‑94 (MQ=60)

                                                                                          AGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAAC     <  SRR4302543.1429055/94‑1 (MQ=60)

                                                                                          AGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAAC     >  SRR4302543.4415092/1‑94 (MQ=60)

                                                                                           GGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAACC    <  SRR4302543.3575701/94‑1 (MQ=60)

                                                                                           GGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAACC    >  SRR4302543.200316/1‑94 (MQ=60)

                                                                                            GACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAACCA   <  SRR4302543.4245210/94‑1 (MQ=60)

                                                                                            GACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAACCA   <  SRR4302543.2180484/94‑1 (MQ=60)

                                                                                             ACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAACCAC  <  SRR4302543.6749178/94‑1 (MQ=60)

GCAGCAGCGCAATGGTG‑AAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAACCAC  >  NC_000913/3623342‑3623527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`