Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,637,944 |
T→C |
H68H (CAT→CAC) |
uspA → |
universal stress protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,637,944 | 0 | T | C | 100.0%
| 745.1
/ NA
| 233 | H68H (CAT→CAC) | uspA | universal stress protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (126/107); total (126/107) |
Only 100 of 254 total aligned reads displayed.
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC > NC_000913/3637854‑3638033
|
cGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGc < 1:4147813/93‑1 (MQ=255)
gTAGATGTAAACTACTCTGACCTATACATCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCa < 1:204194/93‑1 (MQ=255)
gTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCa < 1:2567557/93‑1 (MQ=255)
aGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACt < 2:2799257/93‑1 (MQ=255)
aGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACt < 1:3340927/93‑1 (MQ=255)
tGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAc > 1:3836208/1‑93 (MQ=255)
gTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAcc > 2:2224308/1‑93 (MQ=255)
aaCTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAg > 2:295109/1‑93 (MQ=255)
actactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTgagcgagc > 2:2579000/1‑93 (MQ=255)
actactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGc < 2:3818866/93‑1 (MQ=255)
ctactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCt < 2:3413826/93‑1 (MQ=255)
tactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCtt > 2:159157/1‑93 (MQ=255)
ctctGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTc > 2:1357422/1‑93 (MQ=255)
tctGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTcc > 2:3777004/1‑93 (MQ=255)
tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc > 2:2306162/1‑93 (MQ=255)
tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc > 2:395850/1‑93 (MQ=255)
tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc < 1:3443168/93‑1 (MQ=255)
aCCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTa > 2:3503284/1‑93 (MQ=255)
ccTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTaa < 2:1746705/93‑1 (MQ=255)
ccTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTaa < 1:2460247/93‑1 (MQ=255)
ccTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTaa > 2:1278828/1‑93 (MQ=255)
cTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAt > 1:1012412/1‑93 (MQ=255)
cTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAt > 2:1331757/1‑93 (MQ=255)
tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg > 2:1729659/1‑93 (MQ=255)
tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg > 2:4376684/1‑93 (MQ=255)
tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg > 1:1853135/1‑93 (MQ=255)
ataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACGTCACGCACTGACCGAGCTTTCCACTAATGc > 1:2004632/1‑93 (MQ=255)
ataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGc > 1:3633903/1‑93 (MQ=255)
taCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCa < 2:3340316/93‑1 (MQ=255)
taCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCa > 1:870152/1‑93 (MQ=255)
acCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGc > 2:4057922/1‑93 (MQ=255)
ccGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCt < 1:1485767/93‑1 (MQ=255)
gggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAc > 1:702376/1‑93 (MQ=255)
ggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAcc > 1:1338320/1‑93 (MQ=255)
ggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAcc < 2:4655908/93‑1 (MQ=255)
gCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAccc > 2:1014512/1‑93 (MQ=255)
ttATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTATCCaa > 2:2375631/1‑93 (MQ=255)
ttATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCaa < 1:2940025/93‑1 (MQ=255)
ttATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCaa > 1:3112136/1‑93 (MQ=255)
tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt < 2:1802191/93‑1 (MQ=255)
tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt > 2:416598/1‑93 (MQ=255)
tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt > 1:4325079/1‑93 (MQ=255)
tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt < 2:3024043/93‑1 (MQ=255)
aTTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATc > 1:4687141/1‑93 (MQ=255)
aTTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATc > 1:441860/1‑93 (MQ=255)
aTTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATc < 2:3458288/93‑1 (MQ=255)
tGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCAc < 2:3278323/93‑1 (MQ=255)
gATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACt < 1:3735743/93‑1 (MQ=255)
aTGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTg > 1:1212459/1‑93 (MQ=255)
tgtgAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGa < 1:4457706/93‑1 (MQ=255)
gAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAc > 2:2096108/1‑93 (MQ=255)
aaTCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAcc > 2:769333/1‑93 (MQ=255)
aTCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAccc > 1:327185/1‑93 (MQ=255)
aTCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAccc < 2:4090231/93‑1 (MQ=255)
tGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGa < 2:4538360/93‑1 (MQ=255)
tGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGa < 2:1140154/93‑1 (MQ=255)
tGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGa > 2:2457549/1‑93 (MQ=255)
gggTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGag < 1:2362568/93‑1 (MQ=255)
ggTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagc < 2:4452578/93‑1 (MQ=255)
atatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggca > 1:2821460/1‑93 (MQ=255)
atatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggca > 1:1443231/1‑93 (MQ=255)
tatGCAGAAACGCATCTCTGAAGAGATACATCACAAGCTGACCGTGCTTTACACTAACGCAGGCTACTCAATCACTGAAATCCTGtgcagcag > 2:290211/1‑93 (MQ=255)
tatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcag > 1:4209782/1‑93 (MQ=255)
tatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcag > 2:1930468/1‑93 (MQ=255)
tatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcag < 2:2423011/93‑1 (MQ=255)
tatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcag > 2:2771623/1‑93 (MQ=255)
aaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAcc > 1:2609437/1‑93 (MQ=255)
aaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGAGAcc > 1:1183560/1‑93 (MQ=255)
cGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTg > 1:4054162/1‑93 (MQ=255)
cGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTg < 1:1117687/93‑1 (MQ=255)
cATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTggg > 2:534131/1‑93 (MQ=255)
tctcTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGcc < 2:263706/93‑1 (MQ=255)
ctctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCa > 2:4249474/1‑93 (MQ=255)
ctctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCa < 1:2971754/93‑1 (MQ=255)
ctctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCa < 2:1392280/93‑1 (MQ=255)
tctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAg > 1:2876971/1‑93 (MQ=255)
ctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAgg > 1:604274/1‑93 (MQ=255)
tGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAGCCCTGAGCGGCAGCGGCGACCTGGGCCAGGt < 2:3608704/93‑1 (MQ=255)
tGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAACCCCTGAGCGGCAGCGGCGACCTGGGCCAGGt < 2:1962857/93‑1 (MQ=255)
tGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGt > 2:2143427/1‑93 (MQ=255)
gAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAACCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGtt > 2:3738271/1‑93 (MQ=255)
aaGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTc < 1:2207253/93‑1 (MQ=255)
aaGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTc > 2:3681014/1‑93 (MQ=255)
agagACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCt > 2:617166/1‑93 (MQ=255)
gagaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTg > 2:3164960/1‑93 (MQ=255)
gagaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTg > 1:818089/1‑93 (MQ=255)
gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt > 1:3517643/1‑93 (MQ=255)
gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt < 2:183465/93‑1 (MQ=255)
cacaTCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCg > 1:1963291/1‑93 (MQ=255)
acaTCGAGCACTGGCCGAGCTTTACTCTAATGCAGGCTACCCAAACGCTGAAACCCCGAGCTGCAGCGGGGACCTGGGCCAGGTTCTGGTCGa < 2:1553570/93‑1 (MQ=255)
acaTCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGa > 1:1879363/1‑93 (MQ=255)
acaTCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGa < 1:4255174/93‑1 (MQ=255)
acaTCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGa > 1:2122711/1‑93 (MQ=255)
catcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAt < 2:4625082/93‑1 (MQ=255)
atcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATg > 1:4119845/1‑93 (MQ=255)
atcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATg < 1:3911251/93‑1 (MQ=255)
atcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATg > 1:3056208/1‑93 (MQ=255)
tcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGc < 2:131857/93‑1 (MQ=255)
tcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGc < 1:552954/93‑1 (MQ=255)
tcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGc > 1:1041358/1‑93 (MQ=255)
|
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC > NC_000913/3637854‑3638033
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC > NC_000913/3637851‑3638037
|
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC > SRR4302535.1946952/1‑94 (MQ=60)
CACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACG > SRR4302535.3126081/1‑94 (MQ=60)
CACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACG > SRR4302535.3344170/1‑94 (MQ=60)
CACGTAGATGTAAACTACTCTGACATATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACG < SRR4302535.471374/94‑1 (MQ=60)
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA < SRR4302535.4176213/94‑1 (MQ=60)
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA < SRR4302535.1966429/94‑1 (MQ=60)
GTAGATGTAAACTACTCTGACCTATACATCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC < SRR4302535.205593/94‑1 (MQ=60)
GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC < SRR4302535.2586028/94‑1 (MQ=60)
AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG < SRR4302535.3364204/94‑1 (MQ=60)
ATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAC > SRR4302535.3862660/1‑94 (MQ=60)
ATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAC < SRR4302535.2582407/94‑1 (MQ=60)
TGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACC < SRR4302535.2453016/94‑1 (MQ=60)
GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG < SRR4302535.80610/94‑1 (MQ=60)
GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG > SRR4302535.1988191/1‑94 (MQ=60)
GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG < SRR4302535.3328391/94‑1 (MQ=60)
AAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG > SRR4302535.2989188/1‑94 (MQ=60)
ACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCT < SRR4302535.4244635/94‑1 (MQ=60)
CTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTT > SRR4302535.2085101/1‑94 (MQ=60)
TACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTT > SRR4302535.4143116/1‑94 (MQ=60)
CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC > SRR4302535.4165077/1‑94 (MQ=60)
CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC > SRR4302535.3139213/1‑94 (MQ=60)
CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC > SRR4302535.510595/1‑94 (MQ=60)
TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT < SRR4302535.3550562/94‑1 (MQ=60)
TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT < SRR4302535.3467112/94‑1 (MQ=60)
TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT > SRR4302535.3163524/1‑94 (MQ=60)
GACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTA < SRR4302535.1861766/94‑1 (MQ=60)
GACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTA > SRR4302535.1435640/1‑94 (MQ=60)
CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT < SRR4302535.2477983/94‑1 (MQ=60)
CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT > SRR4302535.1019611/1‑94 (MQ=60)
CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATAACGAACTGACCGAGCTTTCCACTAAT > SRR4302535.4525730/1‑94 (MQ=60)
CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG > SRR4302535.1866483/1‑94 (MQ=60)
CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG > SRR4302535.3949305/1‑94 (MQ=60)
CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG < SRR4302535.1260059/94‑1 (MQ=60)
CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG < SRR4302535.3474514/94‑1 (MQ=60)
TATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACGTCACGCACTGACCGAGCTTTCCACTAATGC > SRR4302535.2019075/1‑94 (MQ=60)
TATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGC > SRR4302535.3659085/1‑94 (MQ=60)
TATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGC > SRR4302535.2192003/1‑94 (MQ=60)
ATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCA < SRR4302535.885858/94‑1 (MQ=60)
ATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCA > SRR4302535.876316/1‑94 (MQ=60)
TACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAG < SRR4302535.1884744/94‑1 (MQ=60)
TACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAG < SRR4302535.854262/94‑1 (MQ=60)
CACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGC > SRR4302535.422352/1‑94 (MQ=60)
CACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGC > SRR4302535.4288736/1‑94 (MQ=60)
CACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGC < SRR4302535.1080832/94‑1 (MQ=60)
CACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGC < SRR4302535.2600254/94‑1 (MQ=60)
CCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTA > SRR4302535.2863075/1‑94 (MQ=60)
CCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTA < SRR4302535.1496401/94‑1 (MQ=60)
CGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAC > SRR4302535.3311412/1‑94 (MQ=60)
CGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAC > SRR4302535.707300/1‑94 (MQ=60)
GGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACC > SRR4302535.1347868/1‑94 (MQ=60)
GGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCC < SRR4302535.2912630/94‑1 (MQ=60)
CTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAA > SRR4302535.3133800/1‑94 (MQ=60)
CTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAA > SRR4302535.2325048/1‑94 (MQ=60)
TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT > SRR4302535.4354658/1‑94 (MQ=60)
TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT < SRR4302535.2960700/94‑1 (MQ=60)
TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC > SRR4302535.4718953/1‑94 (MQ=60)
TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC < SRR4302535.142102/94‑1 (MQ=60)
TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC > SRR4302535.3786229/1‑94 (MQ=60)
TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC > SRR4302535.444955/1‑94 (MQ=60)
ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA < SRR4302535.60060/94‑1 (MQ=60)
ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA > SRR4302535.1706330/1‑94 (MQ=60)
TTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCAC > SRR4302535.4481632/1‑94 (MQ=60)
TGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACT > SRR4302535.1201493/1‑94 (MQ=60)
GATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTG > SRR4302535.1221157/1‑94 (MQ=60)
GATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTG < SRR4302535.3761598/94‑1 (MQ=60)
TGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAA < SRR4302535.4488278/94‑1 (MQ=60)
GAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACC < SRR4302535.3676307/94‑1 (MQ=60)
AATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCC > SRR4302535.3493426/1‑94 (MQ=60)
AATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCC > SRR4302535.329452/1‑94 (MQ=60)
ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT > SRR4302535.102859/1‑94 (MQ=60)
GGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGC < SRR4302535.2379535/94‑1 (MQ=60)
GGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCG < SRR4302535.587364/94‑1 (MQ=60)
GTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGG > SRR4302535.4307703/1‑94 (MQ=60)
GATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCA > SRR4302535.1453553/1‑94 (MQ=60)
GATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCA > SRR4302535.2841496/1‑94 (MQ=60)
ATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAG > SRR4302535.4238595/1‑94 (MQ=60)
TGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGG < SRR4302535.1084140/94‑1 (MQ=60)
CAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCG > SRR4302535.1495206/1‑94 (MQ=60)
GAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAC < SRR4302535.4706625/94‑1 (MQ=60)
AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACC > SRR4302535.2628162/1‑94 (MQ=60)
AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACC < SRR4302535.639779/94‑1 (MQ=60)
AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACC < SRR4302535.2751931/94‑1 (MQ=60)
AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGAGACC > SRR4302535.1192014/1‑94 (MQ=60)
AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT < SRR4302535.810552/94‑1 (MQ=60)
AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT < SRR4302535.2814702/94‑1 (MQ=60)
AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT < SRR4302535.3050106/94‑1 (MQ=60)
ACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTG > SRR4302535.4081922/1‑94 (MQ=60)
CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG < SRR4302535.1125658/94‑1 (MQ=60)
GCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGG > SRR4302535.3052100/1‑94 (MQ=60)
GCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGC > SRR4302535.3120252/1‑94 (MQ=60)
CATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGC > SRR4302535.408736/1‑94 (MQ=60)
TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCA < SRR4302535.3463950/94‑1 (MQ=60)
CTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAG > SRR4302535.2897347/1‑94 (MQ=60)
CTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAG > SRR4302535.1214709/1‑94 (MQ=60)
CTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAG < SRR4302535.2992615/94‑1 (MQ=60)
TCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGG > SRR4302535.608503/1‑94 (MQ=60)
CTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGT > SRR4302535.2930587/1‑94 (MQ=60)
TGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTT > SRR4302535.4368891/1‑94 (MQ=60)
TGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTT < SRR4302535.435719/94‑1 (MQ=60)
TGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTT < SRR4302535.118847/94‑1 (MQ=60)
GAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTC > SRR4302535.917777/1‑94 (MQ=60)
AAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCT < SRR4302535.2222974/94‑1 (MQ=60)
AGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTG < SRR4302535.2098485/94‑1 (MQ=60)
AGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTG > SRR4302535.823828/1‑94 (MQ=60)
GAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGG < SRR4302535.2258767/94‑1 (MQ=60)
AGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGT < SRR4302535.196607/94‑1 (MQ=60)
AGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGT > SRR4302535.3542080/1‑94 (MQ=60)
GACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTC < SRR4302535.2578266/94‑1 (MQ=60)
ACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCG > SRR4302535.4231347/1‑94 (MQ=60)
ACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCG > SRR4302535.1977448/1‑94 (MQ=60)
CACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGA > SRR4302535.2030980/1‑94 (MQ=60)
CACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGA > SRR4302535.1892903/1‑94 (MQ=60)
CACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGA > SRR4302535.2138013/1‑94 (MQ=60)
ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT < SRR4302535.4284325/94‑1 (MQ=60)
ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT < SRR4302535.3719420/94‑1 (MQ=60)
CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG > SRR4302535.3077598/1‑94 (MQ=60)
CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG > SRR4302535.4148039/1‑94 (MQ=60)
CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG < SRR4302535.3904269/94‑1 (MQ=60)
CATCACGCACGGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG < SRR4302535.2043105/94‑1 (MQ=60)
ATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC > SRR4302535.1048743/1‑94 (MQ=60)
ATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC < SRR4302535.3938030/94‑1 (MQ=60)
TCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCA < SRR4302535.556825/94‑1 (MQ=60)
TCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCA > SRR4302535.776344/1‑94 (MQ=60)
TCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCA < SRR4302535.3925764/94‑1 (MQ=60)
ACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAAT > SRR4302535.581244/1‑94 (MQ=60)
ACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAAT < SRR4302535.3235997/94‑1 (MQ=60)
CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC > SRR4302535.2717068/1‑94 (MQ=60)
CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC < SRR4302535.2324925/94‑1 (MQ=60)
CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC < SRR4302535.4193357/94‑1 (MQ=60)
CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC > SRR4302535.4576112/1‑94 (MQ=60)
|
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC > NC_000913/3637851‑3638037
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
