Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,637,944 T→C H68H (CAT→CAC uspA → universal stress protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,637,9440TC99.8% 1336.7 / ‑5.2 421H68H (CAT→CACuspAuniversal stress protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (243/177);  total (243/178)
Fisher's exact test for biased strand distribution p-value = 4.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.98e-01

Only 100 of 454 total aligned reads displayed.

CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC  >  NC_000913/3637854‑3638033
                                                                                          |                                                                                         
 gTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCa                                                                                        >  1:1292112/1‑93 (MQ=255)
 gTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCa                                                                                        >  2:4225663/1‑93 (MQ=255)
  tAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAc                                                                                       <  1:7498376/93‑1 (MQ=255)
  tAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAc                                                                                       >  1:6411832/1‑93 (MQ=255)
   aGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACt                                                                                      >  2:6929554/1‑93 (MQ=255)
   aGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACt                                                                                      <  2:2038922/93‑1 (MQ=255)
    gATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTg                                                                                     >  2:2673285/1‑93 (MQ=255)
     aTGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGa                                                                                    <  2:6457993/93‑1 (MQ=255)
      tGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAc                                                                                   >  2:6059044/1‑93 (MQ=255)
      tGTAAACTACTCTGACCCATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAc                                                                                   >  1:2302765/1‑93 (MQ=255)
       gTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAcc                                                                                  >  1:5736380/1‑93 (MQ=255)
         aaaCTACCCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGGGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGa                                                                                <  1:7095744/93‑1 (MQ=255)
           actactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGc                                                                              >  1:6488662/1‑93 (MQ=255)
           actactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGc                                                                              <  2:1356174/93‑1 (MQ=255)
                 ctGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCa                                                                        >  1:3451597/1‑93 (MQ=255)
                  tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc                                                                       >  1:4661718/1‑93 (MQ=255)
                  tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc                                                                       <  1:4355889/93‑1 (MQ=255)
                  tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc                                                                       <  1:5837092/93‑1 (MQ=255)
                  tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc                                                                       >  1:7214748/1‑93 (MQ=255)
                   gACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACt                                                                      >  1:1703236/1‑93 (MQ=255)
                     ccTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTaa                                                                    <  1:546463/93‑1 (MQ=255)
                     ccTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTaa                                                                    <  1:740371/93‑1 (MQ=255)
                       tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg                                                                  >  1:7862315/1‑93 (MQ=255)
                       tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg                                                                  >  1:7556529/1‑93 (MQ=255)
                       tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg                                                                  >  1:2644063/1‑93 (MQ=255)
                        ataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGc                                                                 >  2:3672238/1‑93 (MQ=255)
                         taCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCa                                                                >  2:1731867/1‑93 (MQ=255)
                          acacCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAg                                                               >  1:1651020/1‑93 (MQ=255)
                           cacCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAgg                                                              >  2:195050/1‑93 (MQ=255)
                           cacCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAgg                                                              >  2:2594066/1‑93 (MQ=255)
                            acCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGc                                                             >  2:7274403/1‑93 (MQ=255)
                            acCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGc                                                             <  1:5254420/93‑1 (MQ=255)
                            acCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGc                                                             <  2:4905536/93‑1 (MQ=255)
                               gggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAc                                                          >  1:6259968/1‑93 (MQ=255)
                                ggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTAcc                                                         <  2:5884704/93‑1 (MQ=255)
                                ggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAcc                                                         >  1:6156277/1‑93 (MQ=255)
                                ggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAcc                                                         >  2:1568895/1‑93 (MQ=255)
                                ggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAcc                                                         >  1:2887924/1‑93 (MQ=255)
                                 gCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAccc                                                        <  2:5547560/93‑1 (MQ=255)
                                   ttATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCaa                                                      >  2:7622379/1‑93 (MQ=255)
                                   ttATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCaa                                                      >  2:3108448/1‑93 (MQ=255)
                                    tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt                                                     <  1:396567/93‑1 (MQ=255)
                                      ttGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCa                                                   <  1:3571502/93‑1 (MQ=255)
                                      ttGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCa                                                   >  1:814395/1‑93 (MQ=255)
                                      ttGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCa                                                   >  2:5075420/1‑93 (MQ=255)
                                      ttGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCa                                                   <  1:5305684/93‑1 (MQ=255)
                                        gATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACt                                                 >  1:4074288/1‑93 (MQ=255)
                                        gATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGAACTGACTGAGCTTTCCACTAATGCAGGCTACCCAATCACt                                                 >  1:7609342/1‑93 (MQ=255)
                                          tgtgAATCTGGGTGATATGCAGAAACGGATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGa                                               >  2:495417/1‑93 (MQ=255)
                                          tgtgAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGa                                               <  2:3007744/93‑1 (MQ=255)
                                           gtgAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGaa                                              >  2:4396045/1‑93 (MQ=255)
                                            tgAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGaaa                                             <  2:4694428/93‑1 (MQ=255)
                                            tgAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACACACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGaaa                                             <  1:3374023/93‑1 (MQ=255)
                                             gAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAc                                            >  2:3310135/1‑93 (MQ=255)
                                             gAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAc                                            >  2:1502769/1‑93 (MQ=255)
                                             gAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAc                                            <  1:3842217/93‑1 (MQ=255)
                                               aTCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAccc                                          <  1:5108129/93‑1 (MQ=255)
                                                tCTGGGTGATATGCAGAAACGTATCTTTGAAGAGACACATCACGCACTGACCGTTCTTTCCACTAATGCAGGCTACCCAATTATTTAAACCCt                                         >  2:7041630/1‑93 (MQ=255)
                                                tCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCt                                         >  1:7356930/1‑93 (MQ=255)
                                                tCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCt                                         >  2:6748298/1‑93 (MQ=255)
                                                tCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCt                                         >  1:2527773/1‑93 (MQ=255)
                                                  tGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGa                                       >  1:4452374/1‑93 (MQ=255)
                                                    ggTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagc                                     <  2:7823917/93‑1 (MQ=255)
                                                     gTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcg                                    >  2:5218438/1‑93 (MQ=255)
                                                      tGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcgg                                   >  1:1933455/1‑93 (MQ=255)
                                                        atatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggca                                 <  1:7730459/93‑1 (MQ=255)
                                                         tatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcag                                <  2:6212249/93‑1 (MQ=255)
                                                         tatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcag                                <  1:938772/93‑1 (MQ=255)
                                                               gAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGa                          <  2:81278/93‑1 (MQ=255)
                                                               gAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGa                          >  1:6384376/1‑93 (MQ=255)
                                                               gAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGa                          >  1:6887198/1‑93 (MQ=255)
                                                                aaaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAc                         <  2:2892869/93‑1 (MQ=255)
                                                                aaaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAc                         <  1:2118016/93‑1 (MQ=255)
                                                                 aaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAcc                        >  2:6343853/1‑93 (MQ=255)
                                                                 aaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAcc                        <  2:5710500/93‑1 (MQ=255)
                                                                 aaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAcc                        >  2:123121/1‑93 (MQ=255)
                                                                 aaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAcc                        >  2:2226404/1‑93 (MQ=255)
                                                                  aCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCt                       >  1:3203029/1‑93 (MQ=255)
                                                                   cGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTg                      >  1:6602603/1‑93 (MQ=255)
                                                                   cGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTg                      <  2:5365769/93‑1 (MQ=255)
                                                                    gCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTgg                     <  2:3399584/93‑1 (MQ=255)
                                                                    gCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTgg                     >  2:2640024/1‑93 (MQ=255)
                                                                       tctcTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGcg                  >  1:5674027/1‑92 (MQ=255)
                                                                        ctctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCa                 <  2:3820734/93‑1 (MQ=255)
                                                                         tctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAg                >  1:4971395/1‑93 (MQ=255)
                                                                          ctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAgg               >  1:4844849/1‑93 (MQ=255)
                                                                             aaGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTc            >  1:5191833/1‑93 (MQ=255)
                                                                             aaGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTc            >  1:3999343/1‑93 (MQ=255)
                                                                                 gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt        >  2:7414822/1‑93 (MQ=255)
                                                                                 gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt        <  1:121349/93‑1 (MQ=255)
                                                                                 gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt        >  1:1035899/1‑93 (MQ=255)
                                                                                    acaTCACTCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGa     <  1:4408270/93‑1 (MQ=255)
                                                                                    acaTCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGa     >  2:4094658/1‑93 (MQ=255)
                                                                                     catcatGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAGCCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAt    <  2:3574794/93‑1 (MQ=255)
                                                                                     catcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAt    <  1:4325988/93‑1 (MQ=255)
                                                                                     catcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAt    <  1:3000576/93‑1 (MQ=255)
                                                                                     catcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAt    <  2:2388938/93‑1 (MQ=255)
                                                                                     catcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAt    >  1:1513845/1‑93 (MQ=255)
                                                                                       tcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGc  <  1:6696443/93‑1 (MQ=255)
                                                                                       tcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGc  >  2:283146/1‑93 (MQ=255)
                                                                                          |                                                                                         
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC  >  NC_000913/3637854‑3638033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 262 total aligned reads displayed.
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC  >  NC_000913/3637851‑3638037
                                                                                             |                                                                                             
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC                                                                                               <  SRR4302543.5337924/94‑1 (MQ=60)
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC                                                                                               <  SRR4302543.1937547/94‑1 (MQ=60)
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC                                                                                               <  SRR4302543.2318871/94‑1 (MQ=60)
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC                                                                                               >  SRR4302543.2964409/1‑94 (MQ=60)
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC                                                                                               <  SRR4302543.6494477/94‑1 (MQ=60)
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC                                                                                               <  SRR4302543.7972932/94‑1 (MQ=60)
  ACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGC                                                                                             >  SRR4302543.7584696/1‑94 (MQ=60)
   CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA                                                                                            >  SRR4302543.7627907/1‑94 (MQ=60)
   CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA                                                                                            >  SRR4302543.1152044/1‑94 (MQ=60)
   CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA                                                                                            >  SRR4302543.1303613/1‑94 (MQ=60)
    GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC                                                                                           >  SRR4302543.6472210/1‑94 (MQ=60)
    GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC                                                                                           >  SRR4302543.5218326/1‑94 (MQ=60)
     TAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACT                                                                                          <  SRR4302543.7570088/94‑1 (MQ=60)
      AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG                                                                                         >  SRR4302543.3401725/1‑94 (MQ=60)
      AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG                                                                                         >  SRR4302543.4379103/1‑94 (MQ=60)
       GATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGA                                                                                        >  SRR4302543.143173/1‑94 (MQ=60)
       GATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGA                                                                                        >  SRR4302543.7623991/1‑94 (MQ=60)
        ATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAC                                                                                       <  SRR4302543.8096/94‑1 (MQ=60)
        ATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAC                                                                                       <  SRR4302543.4736875/94‑1 (MQ=60)
        ATGTAAACTACTCTGACCCATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAC                                                                                       >  SRR4302543.2323744/1‑94 (MQ=60)
         TGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACC                                                                                      <  SRR4302543.5861361/94‑1 (MQ=60)
         TGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACC                                                                                      >  SRR4302543.5788701/1‑94 (MQ=60)
          GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATGACGCACTGACCG                                                                                     >  SRR4302543.4443580/1‑94 (MQ=60)
            AAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG                                                                                   >  SRR4302543.1684116/1‑94 (MQ=60)
            AAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG                                                                                   <  SRR4302543.6055372/94‑1 (MQ=60)
            AAACTACCCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGGGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG                                                                                   <  SRR4302543.7164645/94‑1 (MQ=60)
             AACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGC                                                                                  >  SRR4302543.4231313/1‑94 (MQ=60)
               CTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTT                                                                                >  SRR4302543.7417876/1‑94 (MQ=60)
               CTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTT                                                                                >  SRR4302543.6112920/1‑94 (MQ=60)
                TACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTT                                                                               <  SRR4302543.2115513/94‑1 (MQ=60)
                TACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTC                                                                               >  SRR4302543.6646544/1‑94 (MQ=60)
                  CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC                                                                             <  SRR4302543.265834/94‑1 (MQ=60)
                  CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC                                                                             >  SRR4302543.898527/1‑94 (MQ=60)
                  CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC                                                                             >  SRR4302543.1124506/1‑94 (MQ=60)
                   TCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCA                                                                            >  SRR4302543.3482506/1‑94 (MQ=60)
                    CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC                                                                           >  SRR4302543.7284679/1‑94 (MQ=60)
                    CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC                                                                           >  SRR4302543.4704187/1‑94 (MQ=60)
                    CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC                                                                           >  SRR4302543.4404641/1‑94 (MQ=60)
                     TGACTTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT                                                                          >  SRR4302543.5490685/1‑94 (MQ=60)
                     TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT                                                                          <  SRR4302543.4395356/94‑1 (MQ=60)
                     TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT                                                                          <  SRR4302543.5890185/94‑1 (MQ=60)
                     TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT                                                                          >  SRR4302543.1718495/1‑94 (MQ=60)
                       ACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAA                                                                        >  SRR4302543.4354880/1‑94 (MQ=60)
                       ACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAA                                                                        >  SRR4302543.4468602/1‑94 (MQ=60)
                        CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT                                                                       <  SRR4302543.1707266/94‑1 (MQ=60)
                        CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT                                                                       >  SRR4302543.3511122/1‑94 (MQ=60)
                        CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT                                                                       <  SRR4302543.551504/94‑1 (MQ=60)
                        CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT                                                                       <  SRR4302543.746986/94‑1 (MQ=60)
                        CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT                                                                       <  SRR4302543.442633/94‑1 (MQ=60)
                         CTATACCCCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGCAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG                                                                      >  SRR4302543.4046074/1‑94 (MQ=60)
                         CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG                                                                      >  SRR4302543.7838687/1‑94 (MQ=60)
                         CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG                                                                      >  SRR4302543.7628479/1‑94 (MQ=60)
                          TATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGC                                                                     <  SRR4302543.3433896/94‑1 (MQ=60)
                           ATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCA                                                                    <  SRR4302543.1716720/94‑1 (MQ=60)
                           ATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCA                                                                    >  SRR4302543.7656093/1‑94 (MQ=60)
                           ATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCA                                                                    >  SRR4302543.5098366/1‑94 (MQ=60)
                           ATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCA                                                                    >  SRR4302543.1258064/1‑94 (MQ=60)
                            TACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAG                                                                   >  SRR4302543.1665788/1‑94 (MQ=60)
                             ACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGG                                                                  <  SRR4302543.3060360/94‑1 (MQ=60)
                             ACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGG                                                                  <  SRR4302543.7096460/94‑1 (MQ=60)
                               ACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCT                                                                <  SRR4302543.5301809/94‑1 (MQ=60)
                               ACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCT                                                                <  SRR4302543.7762561/94‑1 (MQ=60)
                                CCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTA                                                               <  SRR4302543.5946230/94‑1 (MQ=60)
                                CCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTA                                                               >  SRR4302543.3956656/1‑94 (MQ=60)
                                 CGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAC                                                              >  SRR4302543.1078943/1‑94 (MQ=60)
                                 CGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAC                                                              >  SRR4302543.7283183/1‑94 (MQ=60)
                                 CGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAC                                                              >  SRR4302543.1316314/1‑94 (MQ=60)
                                 CGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAC                                                              >  SRR4302543.6319011/1‑94 (MQ=60)
                                  GGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACC                                                             >  SRR4302543.1280249/1‑94 (MQ=60)
                                  GGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACC                                                             >  SRR4302543.6214551/1‑94 (MQ=60)
                                    GCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCA                                                           >  SRR4302543.5336223/1‑94 (MQ=60)
                                    GCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCA                                                           >  SRR4302543.3737870/1‑94 (MQ=60)
                                     CTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAA                                                          >  SRR4302543.7826932/1‑94 (MQ=60)
                                     CTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAA                                                          >  SRR4302543.2507059/1‑94 (MQ=60)
                                      TTATTGATGTGAATGTGGGTGATATGCAGAATCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         <  SRR4302543.3143000/94‑1 (MQ=60)
                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         >  SRR4302543.764531/1‑94 (MQ=60)
                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         >  SRR4302543.416015/1‑94 (MQ=60)
                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         >  SRR4302543.416014/1‑94 (MQ=60)
                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         >  SRR4302543.547839/1‑94 (MQ=60)
                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         <  SRR4302543.6471415/94‑1 (MQ=60)
                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         >  SRR4302543.6429163/1‑94 (MQ=60)
                                        aatcATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCCGGCTACCCAATCA                                                       <  SRR4302543.6501000/90‑1 (MQ=60)
                                        ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA                                                       >  SRR4302543.5457395/1‑94 (MQ=60)
                                        ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA                                                       <  SRR4302543.6500999/94‑1 (MQ=60)
                                        ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA                                                       >  SRR4302543.1921388/1‑94 (MQ=60)
                                        ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA                                                       >  SRR4302543.821566/1‑94 (MQ=60)
                                        ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCAAATCA                                                       >  SRR4302543.3979337/1‑94 (MQ=60)
                                         TTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCAC                                                      <  SRR4302543.3603080/94‑1 (MQ=60)
                                          TGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACT                                                     >  SRR4302543.5188487/1‑94 (MQ=60)
                                            ATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGA                                                   >  SRR4302543.6458183/1‑94 (MQ=60)
                                            ATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGA                                                   >  SRR4302543.4775317/1‑94 (MQ=60)
                                            ATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGA                                                   >  SRR4302543.386137/1‑94 (MQ=60)
                                             TGTGAATCTGGGTGATATGCTGAAACTCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAA                                                  <  SRR4302543.843844/94‑1 (MQ=60)
                                             TGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAA                                                  >  SRR4302543.5014379/1‑94 (MQ=60)
                                              GTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAA                                                 >  SRR4302543.4861971/1‑94 (MQ=60)
                                               TGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAC                                                >  SRR4302543.6698927/1‑94 (MQ=60)
                                               TGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAC                                                >  SRR4302543.7566682/1‑94 (MQ=60)
                                               TGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAC                                                <  SRR4302543.5154024/94‑1 (MQ=60)
                                               TGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACACACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAC                                                <  SRR4302543.3404317/94‑1 (MQ=60)
                                                GAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACC                                               <  SRR4302543.3876146/94‑1 (MQ=60)
                                                GAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACC                                               <  SRR4302543.7757332/94‑1 (MQ=60)
                                                GAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACC                                               <  SRR4302543.1966214/94‑1 (MQ=60)
                                                 AATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCC                                              <  SRR4302543.5269883/94‑1 (MQ=60)
                                                 AATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCC                                              <  SRR4302543.5269882/94‑1 (MQ=60)
                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             <  SRR4302543.71619/94‑1 (MQ=60)
                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             >  SRR4302543.4392689/1‑94 (MQ=60)
                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             >  SRR4302543.7427696/1‑94 (MQ=60)
                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             >  SRR4302543.7427697/1‑94 (MQ=60)
                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             >  SRR4302543.2550767/1‑94 (MQ=60)
                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             <  SRR4302543.5154350/94‑1 (MQ=60)
                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             <  SRR4302543.924121/94‑1 (MQ=60)
                                                   TCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTG                                            <  SRR4302543.3406956/94‑1 (MQ=60)
                                                   TCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTG                                            <  SRR4302543.7943963/94‑1 (MQ=60)
                                                    CTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGA                                           >  SRR4302543.5765229/1‑94 (MQ=60)
                                                    CTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGA                                           >  SRR4302543.4492692/1‑94 (MQ=60)
                                                     TGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAG                                          <  SRR4302543.3103740/94‑1 (MQ=60)
                                                     TGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAG                                          <  SRR4302543.1796602/94‑1 (MQ=60)
                                                     TGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAG                                          >  SRR4302543.5863602/1‑94 (MQ=60)
                                                      GGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGC                                         <  SRR4302543.2997434/94‑1 (MQ=60)
                                                       GGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCG                                        <  SRR4302543.7241395/94‑1 (MQ=60)
                                                        GTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGG                                       <  SRR4302543.2773340/94‑1 (MQ=60)
                                                        GTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGG                                       >  SRR4302543.1950842/1‑94 (MQ=60)
                                                         TGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGC                                      >  SRR4302543.5619328/1‑94 (MQ=60)
                                                           ATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAG                                    >  SRR4302543.6806743/1‑94 (MQ=60)
                                                           ATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAG                                    <  SRR4302543.7803521/94‑1 (MQ=60)
                                                            TATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGC                                   <  SRR4302543.946971/94‑1 (MQ=60)
                                                             atgaataaacgccaCTCTGAAGAGACACCGCACGCACTGACCCAGCTTTCCACTAAGGCAGGCTACCCAAGCACTGAAACCCTGAGCGGCAGCG                                  <  SRR4302543.2070250/80‑1 (MQ=60)
                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG                                  <  SRR4302543.4631436/94‑1 (MQ=60)
                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG                                  <  SRR4302543.7310823/94‑1 (MQ=60)
                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG                                  <  SRR4302543.3454152/94‑1 (MQ=60)
                                                              TGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGG                                 >  SRR4302543.2635271/1‑94 (MQ=60)
                                                                CAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCG                               <  SRR4302543.5736451/94‑1 (MQ=60)
                                                                CAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCG                               <  SRR4302543.2867094/94‑1 (MQ=60)
                                                                CAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCG                               <  SRR4302543.6555872/94‑1 (MQ=60)
                                                                 AGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGA                              >  SRR4302543.6444464/1‑94 (MQ=60)
                                                                 AGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGA                              >  SRR4302543.6951973/1‑94 (MQ=60)
                                                                  GAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAC                             <  SRR4302543.5728078/94‑1 (MQ=60)
                                                                   AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACC                            >  SRR4302543.2921054/1‑94 (MQ=60)
                                                                   AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACC                            <  SRR4302543.2136977/94‑1 (MQ=60)
                                                                    AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT                           >  SRR4302543.6793132/1‑94 (MQ=60)
                                                                    AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT                           >  SRR4302543.1287577/1‑94 (MQ=60)
                                                                    AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT                           <  SRR4302543.5264506/94‑1 (MQ=60)
                                                                    AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT                           >  SRR4302543.3231921/1‑94 (MQ=60)
                                                                     ACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTG                          <  SRR4302543.6217750/94‑1 (MQ=60)
                                                                     ACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTG                          >  SRR4302543.6593401/1‑94 (MQ=60)
                                                                     ACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTG                          >  SRR4302543.6664823/1‑94 (MQ=60)
                                                                      CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG                         >  SRR4302543.5132933/1‑94 (MQ=60)
                                                                      CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG                         >  SRR4302543.7474573/1‑94 (MQ=60)
                                                                      CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG                         <  SRR4302543.4619734/94‑1 (MQ=60)
                                                                      CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG                         <  SRR4302543.7716470/94‑1 (MQ=60)
                                                                       GCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGG                        <  SRR4302543.4623971/94‑1 (MQ=60)
                                                                       GCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGG                        >  SRR4302543.4409059/1‑94 (MQ=60)
                                                                       GCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGG                        >  SRR4302543.1634138/1‑94 (MQ=60)
                                                                       GCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGG                        >  SRR4302543.7836516/1‑94 (MQ=60)
                                                                        CATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGC                       >  SRR4302543.1539615/1‑94 (MQ=60)
                                                                         ATCTCTGAAGAGACGCATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCC                      >  SRR4302543.7524140/1‑94 (MQ=60)
                                                                         ATCTCTGAAGAGACACATCACGCACTGACCGAGGTTTCCACTAATGCAGGCTAGCCAATCACTGCAACCCTGCGCGGCAGCGGCTCCCTGGGCC                      >  SRR4302543.4008049/1‑94 (MQ=60)
                                                                         ATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTTGGCC                      >  SRR4302543.3866604/1‑94 (MQ=60)
                                                                         ATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCG                      >  SRR4302543.5725821/1‑94 (MQ=60)
                                                                         ATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCC                      >  SRR4302543.4008048/1‑94 (MQ=60)
                                                                         ATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCC                      >  SRR4302543.6347552/1‑94 (MQ=60)
                                                                         ATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCC                      <  SRR4302543.533482/94‑1 (MQ=60)
                                                                         ATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCC                      <  SRR4302543.3602315/94‑1 (MQ=60)
                                                                          TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCA                     <  SRR4302543.6964965/94‑1 (MQ=60)
                                                                          TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCA                     <  SRR4302543.4913931/94‑1 (MQ=60)
                                                                          TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCA                     <  SRR4302543.2657676/94‑1 (MQ=60)
                                                                           CTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAG                    >  SRR4302543.5016638/1‑94 (MQ=60)
                                                                           CTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAG                    >  SRR4302543.6395964/1‑94 (MQ=60)
                                                                            TCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGG                   >  SRR4302543.4889021/1‑94 (MQ=60)
                                                                            TCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGG                   >  SRR4302543.670676/1‑94 (MQ=60)
                                                                            TCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGG                   <  SRR4302543.3972191/94‑1 (MQ=60)
                                                                             CTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGT                  <  SRR4302543.3252570/94‑1 (MQ=60)
                                                                             CTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGT                  >  SRR4302543.1726471/1‑94 (MQ=60)
                                                                              TGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTT                 <  SRR4302543.7458741/94‑1 (MQ=60)
                                                                              TGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTT                 >  SRR4302543.4459098/1‑94 (MQ=60)
                                                                               GAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTC                >  SRR4302543.5238650/1‑94 (MQ=60)
                                                                               GAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTC                >  SRR4302543.4035005/1‑94 (MQ=60)
                                                                               GAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTC                >  SRR4302543.4094981/1‑94 (MQ=60)
                                                                               GAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCATGAGCGGCAGCGGCGACCTGGGCCAGGTTG                >  SRR4302543.4035006/1‑94 (MQ=60)
                                                                                 AGAGACACATCACGCACTGACGGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTG              <  SRR4302543.2963152/94‑1 (MQ=60)
                                                                                 AGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTG              <  SRR4302543.1651689/94‑1 (MQ=60)
                                                                                  GAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGG             <  SRR4302543.2177825/94‑1 (MQ=60)
                                                                                  GAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGG             <  SRR4302543.7653236/94‑1 (MQ=60)
                                                                                   AGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGT            <  SRR4302543.4014467/94‑1 (MQ=60)
                                                                                   AGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGT            >  SRR4302543.1045103/1‑94 (MQ=60)
                                                                                   AGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGT            <  SRR4302543.6282827/94‑1 (MQ=60)
                                                                                    GACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTC           <  SRR4302543.6776002/94‑1 (MQ=60)
                                                                                    GACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTC           <  SRR4302543.122445/94‑1 (MQ=60)
                                                                                    GACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGAAGCGGCGACCTGGGCCAGGATCTGGTC           >  SRR4302543.6459791/1‑94 (MQ=60)
                                                                                       ACATCACTCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT        <  SRR4302543.4448227/94‑1 (MQ=60)
                                                                                       ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT        >  SRR4302543.1527439/1‑94 (MQ=60)
                                                                                        CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG       <  SRR4302543.4365261/94‑1 (MQ=60)
                                                                                        CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG       <  SRR4302543.2780465/94‑1 (MQ=60)
                                                                                        CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG       <  SRR4302543.3027780/94‑1 (MQ=60)
                                                                                         ATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC      <  SRR4302543.5639241/94‑1 (MQ=60)
                                                                                          TCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCA     <  SRR4302543.2550352/94‑1 (MQ=60)
                                                                                          TCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCA     <  SRR4302543.2254460/94‑1 (MQ=60)
                                                                                          TCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCA     <  SRR4302543.6759646/94‑1 (MQ=60)
                                                                                          TCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCA     >  SRR4302543.5042293/1‑94 (MQ=60)
                                                                                             CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC  <  SRR4302543.92692/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC  >  NC_000913/3637851‑3638037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: