Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,666,629 |
T→C |
T64A (ACG→GCG) |
yhjA ← |
putative cytochrome C peroxidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,666,629 | 0 | T | C | 100.0%
| 634.3
/ NA
| 203 | T64A (ACG→GCG) | yhjA | putative cytochrome C peroxidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (114/89); total (114/89) |
Only 100 of 217 total aligned reads displayed.
TAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC > NC_000913/3666539‑3666718
|
tAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCgcgt > 1:3582272/1‑93 (MQ=255)
aaaaGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGcgtg < 1:2886047/93‑1 (MQ=255)
aaaGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTgg > 2:3166166/1‑93 (MQ=255)
gATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCaa > 2:293875/1‑93 (MQ=255)
gATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCaa < 1:450397/93‑1 (MQ=255)
gATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGGAATTCTGCCGAAGGCGCGTGGCaa > 1:4153134/1‑93 (MQ=255)
aaTTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCaa < 1:3084255/92‑1 (MQ=255)
aTTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAt < 1:428579/93‑1 (MQ=255)
aTTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAt < 1:3801381/93‑1 (MQ=255)
aTTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAt < 1:2744649/93‑1 (MQ=255)
aTTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAt > 1:2256597/1‑93 (MQ=255)
atatCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTc < 2:3466255/93‑1 (MQ=255)
tatCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCg > 1:2402853/1‑93 (MQ=255)
atCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGc < 1:4410629/93‑1 (MQ=255)
tCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCa > 2:497600/1‑93 (MQ=255)
tCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGAGGGTAATTATGGCGAAGGCGCGTGGGCATAGTCGCa > 2:31032/1‑93 (MQ=255)
ccAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCAt > 2:1942108/1‑93 (MQ=255)
cAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATc > 2:3960005/1‑93 (MQ=255)
cAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATc < 2:4278198/93‑1 (MQ=255)
cAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATc > 1:3207162/1‑93 (MQ=255)
aaGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATcc > 1:4677799/1‑93 (MQ=255)
aGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCt > 1:2012069/1‑93 (MQ=255)
aGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCt > 2:1643549/1‑93 (MQ=255)
gCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCtt > 2:553088/1‑93 (MQ=255)
cTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCttt < 2:2171189/93‑1 (MQ=255)
ttAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCtttt > 2:2522089/1‑93 (MQ=255)
ttAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCtttt > 1:4550867/1‑93 (MQ=255)
ttAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCtttt < 2:3509074/93‑1 (MQ=255)
aaTGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTc > 2:2301216/1‑93 (MQ=255)
gTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGgag > 1:861458/1‑93 (MQ=255)
gTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGgag > 2:1926781/1‑93 (MQ=255)
tAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGgaga < 1:3138264/93‑1 (MQ=255)
tAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGgaga < 1:2549279/93‑1 (MQ=255)
aaTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaa < 1:84073/93‑1 (MQ=255)
aaTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaa < 2:212327/93‑1 (MQ=255)
aaTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaa > 1:422628/1‑93 (MQ=255)
aTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaaa < 2:3732311/93‑1 (MQ=255)
aTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaaa > 1:4660143/1‑93 (MQ=255)
ccATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGc > 1:1224026/1‑93 (MQ=255)
ccATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGc < 1:56875/93‑1 (MQ=255)
cATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGcc > 1:2962848/1‑93 (MQ=255)
cATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGcc < 2:2904619/93‑1 (MQ=255)
aTCAACGGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCt < 2:4047164/93‑1 (MQ=255)
cAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATCGTCGCATCCTTTTTCGCGGAGAAAGCCTaa > 2:1313890/1‑93 (MQ=255)
cAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaa < 2:2096875/93‑1 (MQ=255)
aaCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaa < 2:4610635/93‑1 (MQ=255)
aaCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaa > 2:1000862/1‑93 (MQ=255)
aaCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaa > 2:169165/1‑93 (MQ=255)
aaCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaa > 2:149993/1‑93 (MQ=255)
aCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaaa > 1:19513/1‑93 (MQ=255)
aCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaaa > 1:4612578/1‑93 (MQ=255)
aCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaaa > 1:4307129/1‑93 (MQ=255)
aCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaaa > 1:28068/1‑93 (MQ=255)
cTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAc > 1:3902676/1‑93 (MQ=255)
tttCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCtt < 2:1044006/93‑1 (MQ=255)
tccgcgCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCAGAGAAAGCCTAAAACCtta < 2:3345899/91‑1 (MQ=255)
cgcgCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCttatt < 1:3424377/93‑1 (MQ=255)
cgcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTtattat < 1:1103681/93‑1 (MQ=255)
gcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTTGCGGAGAAAGCCTAAAACCTTattatt > 1:1838381/1‑93 (MQ=255)
gcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTattatt < 2:3023546/93‑1 (MQ=255)
ccAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAttt > 2:622299/1‑93 (MQ=255)
ccAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAttt > 1:1013527/1‑93 (MQ=255)
ccAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAttt < 1:2464426/93‑1 (MQ=255)
ccAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAttt < 1:4348197/93‑1 (MQ=255)
cAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAtttt < 2:1104057/93‑1 (MQ=255)
cAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAtttt < 1:3249530/93‑1 (MQ=255)
aGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTc > 2:878635/1‑93 (MQ=255)
gAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAc < 1:4268406/93‑1 (MQ=255)
aaTATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAGCCTTATTATTTTCACt < 1:3392319/93‑1 (MQ=255)
aaTATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACt > 2:4392481/1‑93 (MQ=255)
tataATAATAGGCGGGTAATCCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGa > 2:3830702/1‑93 (MQ=255)
ataataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAc < 1:955899/93‑1 (MQ=255)
ataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAcagc < 1:135763/93‑1 (MQ=255)
taataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAcagca > 1:4012969/1‑93 (MQ=255)
taataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAcagca < 2:2474022/93‑1 (MQ=255)
taataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAcagca < 2:2790203/93‑1 (MQ=255)
taGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAt < 2:1726829/93‑1 (MQ=255)
gCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGcc < 2:133825/93‑1 (MQ=255)
gCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGcc < 1:1489382/93‑1 (MQ=255)
gggTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTg > 1:210216/1‑93 (MQ=255)
gggTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTg > 2:1843673/1‑93 (MQ=255)
gggTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTg > 2:794757/1‑93 (MQ=255)
ggTAATTCTGCCGAAGACGCGTGGCAATCATCGCATCCTTATTCGCGGAGAACGCCTAAAACCTTCTTATTATCACTGACAGCAGATGCCTGa < 2:4684783/93‑1 (MQ=255)
gTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGaa > 1:73597/1‑93 (MQ=255)
tAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAc > 2:3799448/1‑93 (MQ=255)
aaTTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACa < 1:2219365/93‑1 (MQ=255)
aaTTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACa < 1:4190617/93‑1 (MQ=255)
aTTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAt > 2:2069736/1‑93 (MQ=255)
aTTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAt < 2:3135432/93‑1 (MQ=255)
ttCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATc > 1:2860306/1‑93 (MQ=255)
gCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGcc > 1:3568583/1‑93 (MQ=255)
cGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTg < 2:854361/93‑1 (MQ=255)
gAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGt > 2:4118954/1‑93 (MQ=255)
gAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGt > 2:1990202/1‑93 (MQ=255)
gAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGt > 1:1996915/1‑93 (MQ=255)
aaGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGGCAGCAGATGCCTGAACATCGGCCTGtt < 2:1143688/93‑1 (MQ=255)
aaGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGtt > 1:167746/1‑93 (MQ=255)
aGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGttt > 1:1725095/1‑93 (MQ=255)
ggCGCGTCGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTa < 1:179935/93‑1 (MQ=255)
gcgcGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAc < 2:655077/93‑1 (MQ=255)
|
TAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC > NC_000913/3666539‑3666718
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG > NC_000913/3666536‑3666722
|
GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGC > SRR4302535.1464894/1‑94 (MQ=60)
GTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCG > SRR4302535.3525117/1‑94 (MQ=60)
GTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCG > SRR4302535.2910601/1‑94 (MQ=60)
TTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGT > SRR4302535.1734600/1‑94 (MQ=60)
TTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGT > SRR4302535.3607119/1‑94 (MQ=60)
AAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGG < SRR4302535.4351173/94‑1 (MQ=60)
AAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGG < SRR4302535.2906466/94‑1 (MQ=60)
AGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAA > SRR4302535.2633246/1‑94 (MQ=60)
AGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAA > SRR4302535.4595516/1‑94 (MQ=60)
AGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGGAATTCTGCCGAAGGCGCGTGGCAA > SRR4302535.4181573/1‑94 (MQ=60)
GATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT > SRR4302535.3148799/1‑94 (MQ=60)
GATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT < SRR4302535.453551/94‑1 (MQ=60)
GATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT > SRR4302535.2272661/1‑94 (MQ=60)
AATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT < SRR4302535.3105745/94‑1 (MQ=60)
ATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATA < SRR4302535.3827584/94‑1 (MQ=60)
ATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATA < SRR4302535.431559/94‑1 (MQ=60)
ATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATA < SRR4302535.2764213/94‑1 (MQ=60)
ATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATA < SRR4302535.4553264/94‑1 (MQ=60)
TTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGC > SRR4302535.3370690/1‑94 (MQ=60)
ATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCG > SRR4302535.2420137/1‑94 (MQ=60)
ATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCA < SRR4302535.4440816/94‑1 (MQ=60)
ATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCA > SRR4302535.2865438/1‑94 (MQ=60)
CCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATC > SRR4302535.3229375/1‑94 (MQ=60)
CAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCC > SRR4302535.4709365/1‑94 (MQ=60)
AAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCT > SRR4302535.2026564/1‑94 (MQ=60)
AGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTT < SRR4302535.1841730/94‑1 (MQ=60)
AGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTT > SRR4302535.439734/1‑94 (MQ=60)
CTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTT > SRR4302535.4581972/1‑94 (MQ=60)
CTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTT > SRR4302535.862277/1‑94 (MQ=60)
CTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTT > SRR4302535.1133488/1‑94 (MQ=60)
AATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCG < SRR4302535.4093968/94‑1 (MQ=60)
AATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCG > SRR4302535.4229473/1‑94 (MQ=60)
AATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCG > SRR4302535.1867541/1‑94 (MQ=60)
ATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGC > SRR4302535.90728/1‑94 (MQ=60)
GTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGG < SRR4302535.3602179/94‑1 (MQ=60)
CGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAG > SRR4302535.867543/1‑94 (MQ=60)
CGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAG > SRR4302535.1054514/1‑94 (MQ=60)
TAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAA < SRR4302535.3160103/94‑1 (MQ=60)
TAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAA > SRR4302535.425578/1‑94 (MQ=60)
TAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAA < SRR4302535.2567625/94‑1 (MQ=60)
AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA > SRR4302535.4691663/1‑94 (MQ=60)
AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA < SRR4302535.84666/94‑1 (MQ=60)
ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG < SRR4302535.4530682/94‑1 (MQ=60)
ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG < SRR4302535.991627/94‑1 (MQ=60)
TCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGC > SRR4302535.1232782/1‑94 (MQ=60)
CCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCC < SRR4302535.209466/94‑1 (MQ=60)
CCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCC > SRR4302535.2983646/1‑94 (MQ=60)
CCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCC < SRR4302535.57288/94‑1 (MQ=60)
ATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTA > SRR4302535.288107/1‑94 (MQ=60)
CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAA > SRR4302535.2964879/1‑94 (MQ=60)
AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA > SRR4302535.4643916/1‑94 (MQ=60)
AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA > SRR4302535.19659/1‑94 (MQ=60)
AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA > SRR4302535.4274305/1‑94 (MQ=60)
AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA > SRR4302535.4306102/1‑94 (MQ=60)
AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA > SRR4302535.4336594/1‑94 (MQ=60)
AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA > SRR4302535.2238059/1‑94 (MQ=60)
AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA > SRR4302535.28289/1‑94 (MQ=60)
AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGAAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA > SRR4302535.661573/1‑94 (MQ=60)
ACTGTTTCGCGCCAGGAATATAATAGTAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC < SRR4302535.3076156/94‑1 (MQ=60)
ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC > SRR4302535.1428909/1‑94 (MQ=60)
ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC > SRR4302535.4673020/1‑94 (MQ=60)
ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC > SRR4302535.3929412/1‑94 (MQ=60)
CTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACC > SRR4302535.3257261/1‑94 (MQ=60)
TCTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTA < SRR4302535.1716063/94‑1 (MQ=60)
CGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTA < SRR4302535.1513993/94‑1 (MQ=60)
CGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTA < SRR4302535.1256601/94‑1 (MQ=60)
CGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTA < SRR4302535.3448191/94‑1 (MQ=60)
CGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTA < SRR4302535.389380/94‑1 (MQ=60)
CGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTTGCGGAGAAAGCCTAAAACCTTATTATT > SRR4302535.1851642/1‑94 (MQ=60)
CGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATT < SRR4302535.1111564/94‑1 (MQ=60)
GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT > SRR4302535.419547/1‑94 (MQ=60)
GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT > SRR4302535.1020734/1‑94 (MQ=60)
GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT > SRR4302535.3605368/1‑94 (MQ=60)
CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT < SRR4302535.4377946/94‑1 (MQ=60)
CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT > SRR4302535.2654975/1‑94 (MQ=60)
CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT < SRR4302535.2482195/94‑1 (MQ=60)
CAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTC > SRR4302535.760393/1‑94 (MQ=60)
CAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTC < SRR4302535.3272106/94‑1 (MQ=60)
GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT < SRR4302535.3637825/94‑1 (MQ=60)
GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT < SRR4302535.341941/94‑1 (MQ=60)
GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT < SRR4302535.4297632/94‑1 (MQ=60)
GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT > SRR4302535.4518441/1‑94 (MQ=60)
AATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAGCCTTATTATTTTCACTG < SRR4302535.3415922/94‑1 (MQ=60)
ATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGA > SRR4302535.3195686/1‑94 (MQ=60)
ATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACA < SRR4302535.962677/94‑1 (MQ=60)
ATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACA > SRR4302535.4001039/1‑94 (MQ=60)
TAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAG < SRR4302535.4715476/94‑1 (MQ=60)
ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA > SRR4302535.4040420/1‑94 (MQ=60)
ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA > SRR4302535.666679/1‑94 (MQ=60)
ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA < SRR4302535.136710/94‑1 (MQ=60)
TAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATG < SRR4302535.2767020/94‑1 (MQ=60)
GGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCC < SRR4302535.2102226/94‑1 (MQ=60)
GCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCT < SRR4302535.1500067/94‑1 (MQ=60)
CGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTG > SRR4302535.4707596/1‑94 (MQ=60)
CGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTG > SRR4302535.211660/1‑94 (MQ=60)
CGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTG < SRR4302535.2387993/94‑1 (MQ=60)
GGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAA > SRR4302535.74130/1‑94 (MQ=60)
GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAC > SRR4302535.4228443/1‑94 (MQ=60)
AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT < SRR4302535.2235155/94‑1 (MQ=60)
AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT > SRR4302535.2473726/1‑94 (MQ=60)
AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT < SRR4302535.4219297/94‑1 (MQ=60)
AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT > SRR4302535.1798622/1‑94 (MQ=60)
ATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATC > SRR4302535.2880566/1‑94 (MQ=60)
ATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATC > SRR4302535.2011972/1‑94 (MQ=60)
TGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCC > SRR4302535.3593327/1‑94 (MQ=60)
TGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCC > SRR4302535.4320671/1‑94 (MQ=60)
GCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCT < SRR4302535.2497178/94‑1 (MQ=60)
CGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGT > SRR4302535.198858/1‑94 (MQ=60)
CGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGT > SRR4302535.2011291/1‑94 (MQ=60)
GAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTT > SRR4302535.168910/1‑94 (MQ=60)
GAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTT > SRR4302535.3449033/1‑94 (MQ=60)
AAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTT > SRR4302535.1737571/1‑94 (MQ=60)
AAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTT > SRR4302535.2217557/1‑94 (MQ=60)
AGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTA < SRR4302535.3109895/94‑1 (MQ=60)
GGCGCGTCGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC < SRR4302535.181186/94‑1 (MQ=60)
CGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTG > SRR4302535.3285316/1‑94 (MQ=60)
CGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTG < SRR4302535.2502394/94‑1 (MQ=60)
CGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG > SRR4302535.1030413/1‑94 (MQ=60)
CGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG > SRR4302535.2253571/1‑94 (MQ=60)
CGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG < SRR4302535.1841604/94‑1 (MQ=60)
|
GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG > NC_000913/3666536‑3666722
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
