Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,666,629	T→C	T64A (ACG→GCG)	yhjA ←	putative cytochrome C peroxidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,666,629	0	T	C	100.0%	1451.3 / NA	459	T64A (ACG→GCG)	yhjA	putative cytochrome C peroxidase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (226/233); total (226/233)

Only 100 of 485 total aligned reads displayed.

TTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC  >  NC_000913/3666538‑3666718

 tAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCgcgt                                                                                         >  1:6993280/1‑93 (MQ=255)

  aaaaGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGcgtg                                                                                        <  1:5410624/93‑1 (MQ=255)

   aaaGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTgg                                                                                       >  2:1615182/1‑93 (MQ=255)

      gATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCaa                                                                                    >  1:1070598/1‑93 (MQ=255)

       aTTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAt                                                                                   >  1:4661805/1‑93 (MQ=255)

       aTTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAt                                                                                   >  2:3977147/1‑93 (MQ=255)

       aTTTATATCCAAGATTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAt                                                                                   <  2:6932878/93‑1 (MQ=255)

        tttATATCCAAGCTTACTGGCGTAATCCATCACCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATa                                                                                  <  2:2695859/93‑1 (MQ=255)

         ttATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAg                                                                                 <  2:1901994/93‑1 (MQ=255)

          tataTCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAga                                                                                >  1:4423425/1‑92 (MQ=255)

           atatCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTc                                                                               >  1:1841957/1‑93 (MQ=255)

           atatCCAAGCTTAATGTCGTAATCCATCAACTGTTGCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTc                                                                               <  1:4837590/93‑1 (MQ=255)

            tatCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCg                                                                              <  2:6249348/93‑1 (MQ=255)

             atCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGc                                                                             >  2:3355049/1‑93 (MQ=255)

              tCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCa                                                                            >  1:7115756/1‑93 (MQ=255)

              tCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCa                                                                            >  2:223880/1‑93 (MQ=255)

              tCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCa                                                                            <  1:1691885/93‑1 (MQ=255)

                cAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATc                                                                          >  2:6673769/1‑93 (MQ=255)

                   gCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCtt                                                                       >  1:4549840/1‑93 (MQ=255)

                     ttAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGTGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCtttt                                                                     <  2:6066501/93‑1 (MQ=255)

                     ttAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCtttt                                                                     >  1:5233386/1‑93 (MQ=255)

                           tCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCgg                                                               >  2:4915433/1‑93 (MQ=255)

                           tCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCgg                                                               <  2:4740669/93‑1 (MQ=255)

                             gTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGgag                                                             >  1:2092522/1‑93 (MQ=255)

                              tAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGgaga                                                            <  2:2520602/93‑1 (MQ=255)

                              tAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGgaga                                                            <  1:990185/93‑1 (MQ=255)

                              tAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGgaga                                                            <  1:5082598/93‑1 (MQ=255)

                               aaTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaa                                                           <  2:731901/93‑1 (MQ=255)

                               aaTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaa                                                           <  1:4155955/93‑1 (MQ=255)

                                aTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaaa                                                          >  2:362758/1‑93 (MQ=255)

                                aTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaaa                                                          <  1:7393712/93‑1 (MQ=255)

                                aTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaaa                                                          <  2:4614819/93‑1 (MQ=255)

                                  ccATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGc                                                        <  1:5686445/93‑1 (MQ=255)

                                  ccATCAACTGTTTCGCGCAAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGc                                                        <  2:5902135/93‑1 (MQ=255)

                                   cATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGcc                                                       <  1:1760632/93‑1 (MQ=255)

                                     tCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTa                                                     >  1:5922406/1‑93 (MQ=255)

                                     tCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTa                                                     >  2:4869718/1‑93 (MQ=255)

                                     acAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTa                                                     <  2:5697709/92‑1 (MQ=255)

                                      cAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaa                                                    <  2:4105209/93‑1 (MQ=255)

                                      cAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaa                                                    >  2:211924/1‑93 (MQ=255)

                                      cAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaa                                                    <  1:2983346/93‑1 (MQ=255)

                                       aaCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaa                                                   >  1:1932825/1‑93 (MQ=255)

                                       aaCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaa                                                   <  2:6811018/93‑1 (MQ=255)

                                       aaCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaa                                                   >  2:7000866/1‑93 (MQ=255)

                                           gTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCt                                               >  1:5548474/1‑93 (MQ=255)

                                           gTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCt                                               <  2:1161754/93‑1 (MQ=255)

                                            tttCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCtt                                              >  1:6204338/1‑93 (MQ=255)

                                                gcgcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCttatta                                          <  2:888630/93‑1 (MQ=255)

                                                 cgcCAGGAATATAATAATAGGCGTGTAAGTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTtattat                                         <  2:7561952/93‑1 (MQ=255)

                                                 cgcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTtattat                                         <  1:5734937/93‑1 (MQ=255)

                                                 cgcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTtattat                                         >  2:1932653/1‑93 (MQ=255)

                                                 cgcCAGAAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTtattat                                         <  1:83391/93‑1 (MQ=255)

                                                   ccAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAttt                                       <  1:3861889/93‑1 (MQ=255)

                                                    cAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAtttt                                      >  2:6614383/1‑93 (MQ=255)

                                                     aGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTc                                     >  2:2357846/1‑93 (MQ=255)

                                                      ggAATATAATAATGGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCa                                    <  1:2289138/93‑1 (MQ=255)

                                                      ggAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGCAAGCCTAAAACCTTATTATTTTCa                                    >  2:1795489/1‑93 (MQ=255)

                                                      ggAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCa                                    >  1:4073325/1‑93 (MQ=255)

                                                      ggAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCa                                    >  1:7553148/1‑93 (MQ=255)

                                                       gAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAc                                   <  2:4261666/93‑1 (MQ=255)

                                                       gAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAc                                   >  1:3698587/1‑93 (MQ=255)

                                                       gAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAc                                   >  1:7282678/1‑93 (MQ=255)

                                                       gAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAc                                   <  2:1124458/93‑1 (MQ=255)

                                                        aaTATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACt                                  >  2:541129/1‑93 (MQ=255)

                                                        aaTATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACt                                  <  1:1513221/93‑1 (MQ=255)

                                                         atatAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTg                                 <  2:6447130/93‑1 (MQ=255)

                                                          tataATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGa                                >  2:6346869/1‑93 (MQ=255)

                                                            taataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAca                              <  2:2827833/93‑1 (MQ=255)

                                                               taataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAcagca                           >  2:2928494/1‑93 (MQ=255)

                                                                aataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAcagcag                          >  1:6663776/1‑93 (MQ=255)

                                                                 ataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGa                         >  1:1185091/1‑93 (MQ=255)

                                                                 ataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGa                         <  1:3235847/93‑1 (MQ=255)

                                                                 ataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGa                         <  2:5103943/93‑1 (MQ=255)

                                                                 ataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGa                         <  1:2369382/93‑1 (MQ=255)

                                                                 ataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGa                         <  1:5288983/93‑1 (MQ=255)

                                                                 ataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGa                         <  1:7832969/93‑1 (MQ=255)

                                                                  taGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAt                        <  1:251239/93‑1 (MQ=255)

                                                                   aGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATg                       >  1:13083/1‑93 (MQ=255)

                                                                     gCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGcc                     <  1:2821833/93‑1 (MQ=255)

                                                                      cGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCt                    <  2:3127849/93‑1 (MQ=255)

                                                                       gggTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTg                   >  1:7688746/1‑93 (MQ=255)

                                                                        ggTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGa                  >  1:6240740/1‑93 (MQ=255)

                                                                           aaTTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACa               >  2:1356213/1‑93 (MQ=255)

                                                                           aaTTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACa               >  1:641550/1‑93 (MQ=255)

                                                                            aTTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAt              >  1:6830982/1‑93 (MQ=255)

                                                                             ttCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATc             <  2:5354884/93‑1 (MQ=255)

                                                                             ttCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATc             >  1:3489674/1‑93 (MQ=255)

                                                                             ttCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATc             >  2:1232391/1‑93 (MQ=255)

                                                                             ttCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATc             <  2:1716711/93‑1 (MQ=255)

                                                                               cTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCgg           <  1:3097911/93‑1 (MQ=255)

                                                                                tGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGc          <  2:559760/93‑1 (MQ=255)

                                                                                 gCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGcc         <  2:7062750/93‑1 (MQ=255)

                                                                                 gCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGcc         >  2:7176868/1‑93 (MQ=255)

                                                                                  ccGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCt        <  2:1461935/93‑1 (MQ=255)

                                                                                    gAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGt      >  1:7877007/1‑93 (MQ=255)

                                                                                    gAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGt      <  2:7389448/93‑1 (MQ=255)

                                                                                     aaGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGtt     <  1:6887018/93‑1 (MQ=255)

                                                                                       ggCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTa   <  2:3829536/93‑1 (MQ=255)

                                                                                       ggCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATAATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGtttc   >  1:5629697/1‑92 (MQ=255)

                                                                                        gcgcGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAc  >  1:269440/1‑93 (MQ=255)

TTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC  >  NC_000913/3666538‑3666718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 255 total aligned reads displayed.

GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG  >  NC_000913/3666536‑3666722

GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGC                                                                                               <  SRR4302543.99473/94‑1 (MQ=60)

GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGC                                                                                               >  SRR4302543.4377095/1‑94 (MQ=60)

 GTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCG                                                                                              >  SRR4302543.5927392/1‑94 (MQ=60)

 ATTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTGCTCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTG                                                                                              <  SRR4302543.5592651/94‑1 (MQ=60)

  TTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGT                                                                                             <  SRR4302543.3714165/94‑1 (MQ=60)

  TTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGT                                                                                             >  SRR4302543.7059127/1‑94 (MQ=60)

    AAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGG                                                                                           <  SRR4302543.5459828/94‑1 (MQ=60)

       AGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAA                                                                                        >  SRR4302543.1080222/1‑94 (MQ=60)

       AGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAA                                                                                        <  SRR4302543.2351599/94‑1 (MQ=60)

       AGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAA                                                                                        >  SRR4302543.1739779/1‑94 (MQ=60)

        GATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT                                                                                       >  SRR4302543.4704276/1‑94 (MQ=60)

        GATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT                                                                                       <  SRR4302543.7463147/94‑1 (MQ=60)

        GATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT                                                                                       <  SRR4302543.4912447/94‑1 (MQ=60)

         ATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATA                                                                                      <  SRR4302543.6290123/94‑1 (MQ=60)

          TTTATATCCAAGCTTAATGTCGTCATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAG                                                                                     <  SRR4302543.7109651/94‑1 (MQ=60)

          TTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAG                                                                                     <  SRR4302543.851811/94‑1 (MQ=60)

           TTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGA                                                                                    >  SRR4302543.4463514/1‑94 (MQ=60)

            TATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTC                                                                                   <  SRR4302543.5777475/94‑1 (MQ=60)

             ATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCG                                                                                  >  SRR4302543.6974737/1‑94 (MQ=60)

             ATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCG                                                                                  >  SRR4302543.6974736/1‑94 (MQ=60)

             ATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCG                                                                                  <  SRR4302543.7413631/94‑1 (MQ=60)

             ATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCG                                                                                  >  SRR4302543.5838723/1‑94 (MQ=60)

             ATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCG                                                                                  <  SRR4302543.818284/94‑1 (MQ=60)

              TATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGC                                                                                 <  SRR4302543.4587313/94‑1 (MQ=60)

              TATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGC                                                                                 >  SRR4302543.4827385/1‑94 (MQ=60)

               ATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCA                                                                                >  SRR4302543.7184879/1‑94 (MQ=60)

                TCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCAT                                                                               <  SRR4302543.1707069/94‑1 (MQ=60)

                 CCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATC                                                                              >  SRR4302543.2023051/1‑94 (MQ=60)

                 CCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATC                                                                              >  SRR4302543.7113386/1‑94 (MQ=60)

                  CAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCC                                                                             <  SRR4302543.723334/94‑1 (MQ=60)

                   AAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCT                                                                            <  SRR4302543.359541/94‑1 (MQ=60)

                    AGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTT                                                                           >  SRR4302543.4591277/1‑94 (MQ=60)

                    AGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTT                                                                           <  SRR4302543.990280/94‑1 (MQ=60)

                    AGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTT                                                                           >  SRR4302543.2235040/1‑94 (MQ=60)

                     GCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTT                                                                          <  SRR4302543.1310909/94‑1 (MQ=60)

                     GCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTT                                                                          >  SRR4302543.4157344/1‑94 (MQ=60)

                     GCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTT                                                                          <  SRR4302543.3088725/94‑1 (MQ=60)

                     GCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTT                                                                          <  SRR4302543.3050858/94‑1 (MQ=60)

                      CTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTT                                                                         >  SRR4302543.1088699/1‑94 (MQ=60)

                      CTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTT                                                                         <  SRR4302543.2628390/94‑1 (MQ=60)

                        TAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGTGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTC                                                                       <  SRR4302543.7216941/94‑1 (MQ=60)

                        TAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTC                                                                       <  SRR4302543.4115752/94‑1 (MQ=60)

                        TAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTC                                                                       <  SRR4302543.683533/94‑1 (MQ=60)

                         AATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCG                                                                      <  SRR4302543.7706789/94‑1 (MQ=60)

                         AATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCG                                                                      >  SRR4302543.6277107/1‑94 (MQ=60)

                         AATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCG                                                                      >  SRR4302543.7542498/1‑94 (MQ=60)

                          ATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGC                                                                     >  SRR4302543.1717250/1‑94 (MQ=60)

                           TGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCG                                                                    >  SRR4302543.6430155/1‑94 (MQ=60)

                           TGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCG                                                                    >  SRR4302543.6078471/1‑94 (MQ=60)

                            GTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGG                                                                   <  SRR4302543.6583602/94‑1 (MQ=60)

                            GTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGG                                                                   >  SRR4302543.2889195/1‑94 (MQ=60)

                             TCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGA                                                                  >  SRR4302543.6901205/1‑94 (MQ=60)

                              CGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAG                                                                 <  SRR4302543.5282862/94‑1 (MQ=60)

                              CGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAG                                                                 >  SRR4302543.3750223/1‑94 (MQ=60)

                               GTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGA                                                                >  SRR4302543.2200929/1‑94 (MQ=60)

                               GTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGA                                                                >  SRR4302543.3134800/1‑94 (MQ=60)

                                TAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAA                                                               <  SRR4302543.3807926/94‑1 (MQ=60)

                                TAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAA                                                               <  SRR4302543.2313928/94‑1 (MQ=60)

                                TAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGCCGCATCCTTTTTGGCGGAGAA                                                               >  SRR4302543.7883252/1‑94 (MQ=60)

                                 AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGCAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA                                                              >  SRR4302543.4347204/1‑94 (MQ=60)

                                 AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA                                                              >  SRR4302543.1878217/1‑94 (MQ=60)

                                 AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA                                                              <  SRR4302543.1783451/94‑1 (MQ=60)

                                 AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA                                                              <  SRR4302543.4193536/94‑1 (MQ=60)

                                 AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA                                                              >  SRR4302543.3249357/1‑94 (MQ=60)

                                 AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA                                                              >  SRR4302543.7673310/1‑94 (MQ=60)

                                 AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA                                                              >  SRR4302543.4347203/1‑94 (MQ=60)

                                  ATCCATCATCTGTTTCGCGCCAGGAAAATAATGATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             <  SRR4302543.2359817/94‑1 (MQ=60)

                                  ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             >  SRR4302543.5614176/1‑94 (MQ=60)

                                  ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             <  SRR4302543.7464723/94‑1 (MQ=60)

                                  ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             <  SRR4302543.1352556/94‑1 (MQ=60)

                                  ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             <  SRR4302543.4740889/94‑1 (MQ=60)

                                  ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             >  SRR4302543.4889649/1‑94 (MQ=60)

                                  ACCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             <  SRR4302543.1840355/94‑1 (MQ=60)

                                   TCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGC                                                            <  SRR4302543.5734175/94‑1 (MQ=60)

                                   TCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGC                                                            <  SRR4302543.3901412/94‑1 (MQ=60)

                                    CCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCC                                                           >  SRR4302543.5077325/1‑94 (MQ=60)

                                    CCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCC                                                           >  SRR4302543.7930216/1‑94 (MQ=60)

                                    CCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCC                                                           <  SRR4302543.5738342/94‑1 (MQ=60)

                                    CCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCC                                                           <  SRR4302543.4770293/94‑1 (MQ=60)

                                    CCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCC                                                           >  SRR4302543.5536992/1‑94 (MQ=60)

                                      ATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTA                                                         >  SRR4302543.5976521/1‑94 (MQ=60)

                                       TCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAA                                                        <  SRR4302543.4619995/94‑1 (MQ=60)

                                        CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAA                                                       <  SRR4302543.5680963/94‑1 (MQ=60)

                                        CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAA                                                       <  SRR4302543.3010436/94‑1 (MQ=60)

                                        CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAA                                                       >  SRR4302543.2242608/1‑94 (MQ=60)

                                        CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAA                                                       >  SRR4302543.1950208/1‑94 (MQ=60)

                                        CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGCCGCATCCTTTTTCGCGGACACAGCCTAAA                                                       >  SRR4302543.3232851/1‑94 (MQ=60)

                                         AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA                                                      <  SRR4302543.6750211/94‑1 (MQ=60)

                                         AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA                                                      <  SRR4302543.1939074/94‑1 (MQ=60)

                                          ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC                                                     >  SRR4302543.5162781/1‑94 (MQ=60)

                                          ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC                                                     >  SRR4302543.5775460/1‑94 (MQ=60)

                                          ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC                                                     >  SRR4302543.1603159/1‑94 (MQ=60)

                                            TGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCT                                                   >  SRR4302543.5598934/1‑94 (MQ=60)

                                             GTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTT                                                  <  SRR4302543.4075201/94‑1 (MQ=60)

                                             GTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTT                                                  >  SRR4302543.7147397/1‑94 (MQ=60)

                                              TTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTA                                                 <  SRR4302543.6410310/94‑1 (MQ=60)

                                               TTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTAT                                                >  SRR4302543.5690692/1‑94 (MQ=60)

                                               TTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTAT                                                <  SRR4302543.6441704/94‑1 (MQ=60)

                                                TCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATT                                               <  SRR4302543.2060065/94‑1 (MQ=60)

                                                 CGCGCTAGGAATATAATAATAGGCGGGGAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTA                                              >  SRR4302543.463375/1‑94 (MQ=60)

                                                 CGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTA                                              <  SRR4302543.5172360/94‑1 (MQ=60)

                                                   CGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATT                                            <  SRR4302543.5787253/94‑1 (MQ=60)

                                                   CGCCAGAAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATT                                            <  SRR4302543.84162/94‑1 (MQ=60)

                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT                                           >  SRR4302543.6814501/1‑94 (MQ=60)

                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT                                           >  SRR4302543.1658138/1‑94 (MQ=60)

                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT                                           <  SRR4302543.1113964/94‑1 (MQ=60)

                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCC‑TTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT                                          <  SRR4302543.6944403/94‑1 (MQ=60)

                                                     CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT                                          >  SRR4302543.2212368/1‑94 (MQ=60)

                                                     CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT                                          >  SRR4302543.4501761/1‑94 (MQ=60)

                                                     CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT                                          <  SRR4302543.3896001/94‑1 (MQ=60)

                                                     CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT                                          >  SRR4302543.7911907/1‑94 (MQ=60)

                                                     CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT                                          >  SRR4302543.7911908/1‑94 (MQ=60)

                                                      CAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTC                                         >  SRR4302543.768306/1‑94 (MQ=60)

                                                       CGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCA                                        <  SRR4302543.6228458/94‑1 (MQ=60)

                                                       AGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCA                                        <  SRR4302543.6420369/94‑1 (MQ=60)

                                                       AGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCA                                        >  SRR4302543.4109820/1‑94 (MQ=60)

                                                       AGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCA                                        >  SRR4302543.7625079/1‑94 (MQ=60)

                                                       AGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTAGCGGAGAAAGCCTAAAACCTTATTATTTTCA                                        <  SRR4302543.2819202/94‑1 (MQ=60)

                                                        GGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAC                                       <  SRR4302543.1696420/94‑1 (MQ=60)

                                                        GGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAC                                       >  SRR4302543.3731104/1‑94 (MQ=60)

                                                        GGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAC                                       >  SRR4302543.7353004/1‑94 (MQ=60)

                                                         GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT                                      <  SRR4302543.1257584/94‑1 (MQ=60)

                                                         GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT                                      >  SRR4302543.6294539/1‑94 (MQ=60)

                                                         GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT                                      <  SRR4302543.2402212/94‑1 (MQ=60)

                                                          AATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTG                                     <  SRR4302543.1526812/94‑1 (MQ=60)

                                                          AATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTG                                     >  SRR4302543.4498115/1‑94 (MQ=60)

                                                          AATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTG                                     <  SRR4302543.4648375/94‑1 (MQ=60)

                                                           ATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGA                                    >  SRR4302543.6185411/1‑94 (MQ=60)

                                                           ATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGA                                    >  SRR4302543.3131394/1‑94 (MQ=60)

                                                            TATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAC                                   >  SRR4302543.4089673/1‑94 (MQ=60)

                                                            TATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAC                                   <  SRR4302543.5742475/94‑1 (MQ=60)

                                                              TAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAG                                 <  SRR4302543.6292247/94‑1 (MQ=60)

                                                               AATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGC                                >  SRR4302543.3925967/1‑94 (MQ=60)

                                                               AATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGC                                <  SRR4302543.5488466/94‑1 (MQ=60)

                                                               AATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGC                                >  SRR4302543.6662919/1‑94 (MQ=60)

                                                                ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA                               <  SRR4302543.5113194/94‑1 (MQ=60)

                                                                ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA                               <  SRR4302543.5795991/94‑1 (MQ=60)

                                                                ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA                               >  SRR4302543.985935/1‑94 (MQ=60)

                                                                 TAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAG                              <  SRR4302543.127608/94‑1 (MQ=60)

                                                                 TAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAG                              >  SRR4302543.2473138/1‑94 (MQ=60)

                                                                 TAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAG                              >  SRR4302543.6726692/1‑94 (MQ=60)

                                                                 TAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTGTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAG                              <  SRR4302543.4401071/94‑1 (MQ=60)

                                                                  AATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGA                             >  SRR4302543.5441370/1‑94 (MQ=60)

                                                                  AATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGA                             >  SRR4302543.5441369/1‑94 (MQ=60)

                                                                  AATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGA                             >  SRR4302543.6483130/1‑94 (MQ=60)

                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302543.1469704/94‑1 (MQ=60)

                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302543.2595495/94‑1 (MQ=60)

                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302543.3265116/94‑1 (MQ=60)

                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302543.7906717/94‑1 (MQ=60)

                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302543.2390855/94‑1 (MQ=60)

                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302543.5336728/94‑1 (MQ=60)

                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            >  SRR4302543.5306273/1‑94 (MQ=60)

                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302543.3633014/94‑1 (MQ=60)

                                                                    TAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATG                           <  SRR4302543.253425/94‑1 (MQ=60)

                                                                    TAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATG                           <  SRR4302543.3556544/94‑1 (MQ=60)

                                                                     AGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGC                          <  SRR4302543.3081583/94‑1 (MQ=60)

                                                                       GCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCT                        <  SRR4302543.2847651/94‑1 (MQ=60)

                                                                        CGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTG                       >  SRR4302543.7761551/1‑94 (MQ=60)

                                                                        CGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTG                       >  SRR4302543.7761552/1‑94 (MQ=60)

                                                                          GGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAA                     <  SRR4302543.3299385/94‑1 (MQ=60)

                                                                            TAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACA                   >  SRR4302543.5200366/1‑94 (MQ=60)

                                                                             AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT                  >  SRR4302543.6895472/1‑94 (MQ=60)

                                                                             AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT                  >  SRR4302543.2754757/1‑94 (MQ=60)

                                                                             AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT                  >  SRR4302543.346001/1‑94 (MQ=60)

                                                                              ATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATC                 >  SRR4302543.6903283/1‑94 (MQ=60)

                                                                              ATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATC                 >  SRR4302543.2537302/1‑94 (MQ=60)

                                                                              ATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATC                 <  SRR4302543.1469336/94‑1 (MQ=60)

                                                                              ATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATC                 >  SRR4302543.3520911/1‑94 (MQ=60)

                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCG                <  SRR4302543.7602946/94‑1 (MQ=60)

                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCG                >  SRR4302543.1832793/1‑94 (MQ=60)

                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCG                <  SRR4302543.2032310/94‑1 (MQ=60)

                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCG                <  SRR4302543.7497234/94‑1 (MQ=60)

                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCG                <  SRR4302543.7351274/94‑1 (MQ=60)

                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCG                <  SRR4302543.3814066/94‑1 (MQ=60)

                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCG                <  SRR4302543.1707501/94‑1 (MQ=60)

                                                                                 CTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGC              <  SRR4302543.3125773/94‑1 (MQ=60)

                                                                                 CTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGC              >  SRR4302543.1237462/1‑94 (MQ=60)

                                                                                  TGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCC             >  SRR4302543.1839823/1‑94 (MQ=60)

                                                                                   GCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCT            <  SRR4302543.5610999/94‑1 (MQ=60)

                                                                                    CCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTG           >  SRR4302543.7373514/1‑94 (MQ=60)

                                                                                    CCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTG           >  SRR4302543.5289888/1‑94 (MQ=60)

                                                                                     CGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGT          >  SRR4302543.3473754/1‑94 (MQ=60)

                                                                                     CGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGT          >  SRR4302543.1126163/1‑94 (MQ=60)

                                                                                     CGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGT          >  SRR4302543.7995283/1‑94 (MQ=60)

                                                                                     CGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGT          >  SRR4302543.7951153/1‑94 (MQ=60)

                                                                                      GAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTT         >  SRR4302543.1875987/1‑94 (MQ=60)

                                                                                       GAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTT        <  SRR4302543.2416786/94‑1 (MQ=60)

                                                                                       AAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTT        <  SRR4302543.6951792/94‑1 (MQ=60)

                                                                                        AGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTA       >  SRR4302543.2740228/1‑94 (MQ=60)

                                                                                        AGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTA       >  SRR4302543.5418487/1‑94 (MQ=60)

                                                                                        AGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTA       >  SRR4302543.5681225/1‑94 (MQ=60)

                                                                                        AGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATAATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTC       >  SRR4302543.5680999/1‑94 (MQ=60)

                                                                                         GGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC      <  SRR4302543.1750095/94‑1 (MQ=60)

                                                                                         GGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC      <  SRR4302543.2949471/94‑1 (MQ=60)

                                                                                         GGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC      <  SRR4302543.7983796/94‑1 (MQ=60)

                                                                                         GGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC      >  SRR4302543.271810/1‑94 (MQ=60)

                                                                                           CGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTG    >  SRR4302543.1336732/1‑94 (MQ=60)

                                                                                           CGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTG    >  SRR4302543.1336731/1‑94 (MQ=60)

                                                                                           CGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTG    <  SRR4302543.518852/94‑1 (MQ=60)

                                                                                             CGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG  >  SRR4302543.6250686/1‑94 (MQ=60)

GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG  >  NC_000913/3666536‑3666722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`