Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1873 183.1 9376148 98.2% 9207377 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,720,299 A→G A576A (GCT→GCC)  glyS ← glycine tRNA synthetase beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,720,2990AG100.0% 881.8 / NA 277A576A (GCT→GCC) glySglycine tRNA synthetase beta subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (135/142);  total (135/142)

Only 100 of 301 total aligned reads displayed.

CAGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTG  >  NC_000913/3720209‑3720388
                                                                                          |                                                                                         
 aGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCt                                                                                        <  1:1971942/93‑1 (MQ=255)
 aGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCt                                                                                        <  2:2593271/93‑1 (MQ=255)
  gggTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTg                                                                                       >  1:642828/1‑93 (MQ=255)
   ggTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGc                                                                                      <  2:1575723/93‑1 (MQ=255)
   ggTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGc                                                                                      >  2:1182908/1‑93 (MQ=255)
    gTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCa                                                                                     >  2:1808769/1‑93 (MQ=255)
    gTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCa                                                                                     <  2:73221/93‑1 (MQ=255)
    gTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCa                                                                                     <  1:3007674/93‑1 (MQ=255)
       gagGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATcc                                                                                  >  1:4225522/1‑93 (MQ=255)
       gagGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATcc                                                                                  >  1:1337727/1‑93 (MQ=255)
       gagGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATcc                                                                                  <  1:582874/93‑1 (MQ=255)
        agGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCa                                                                                 <  2:2295143/93‑1 (MQ=255)
         gtaaTTCACGCGGTCGTGCAGAACTTCGTCAGATTTCGCCAGAATGTTAGATACGCGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAg                                                                                <  2:4232067/90‑1 (MQ=255)
         ggCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAg                                                                                <  1:406770/93‑1 (MQ=255)
         ggCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAg                                                                                <  2:2808397/93‑1 (MQ=255)
         ggCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAg                                                                                >  1:3262942/1‑93 (MQ=255)
         ggCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTATTCGCCGCCGCCAGTGCAGCGGCTGCATCCAg                                                                                <  1:183619/93‑1 (MQ=255)
          gCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAgg                                                                               <  2:2626841/93‑1 (MQ=255)
            aTTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGt                                                                             >  1:2715237/1‑93 (MQ=255)
             ttCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTa                                                                            >  1:2671447/1‑93 (MQ=255)
             ttCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTa                                                                            >  1:1367731/1‑93 (MQ=255)
                aCGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACgg                                                                         >  1:2832046/1‑93 (MQ=255)
                 cgcgGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGa                                                                        <  1:1653914/93‑1 (MQ=255)
                  gcgGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGaa                                                                       <  1:2325641/93‑1 (MQ=255)
                   ccgTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGaaa                                                                      <  1:1055371/91‑1 (MQ=255)
                    ggTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAAt                                                                     <  2:564832/93‑1 (MQ=255)
                    ggTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAAt                                                                     >  1:1995952/1‑93 (MQ=255)
                     gTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATg                                                                    >  1:204133/1‑93 (MQ=255)
                      tCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGc                                                                   <  2:503144/93‑1 (MQ=255)
                      tCGCTCAGCACTTCGTCAGATTTCGCCAGAATGCTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATTCACGGTACGGAAATGc                                                                   >  2:835794/1‑93 (MQ=255)
                        gCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGa                                                                 >  2:3767449/1‑93 (MQ=255)
                         cTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGAt                                                                <  2:3380134/93‑1 (MQ=255)
                          tCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATa                                                               >  1:3908581/1‑93 (MQ=255)
                           cAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATAc                                                              <  1:3881854/93‑1 (MQ=255)
                           cAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATAc                                                              >  1:2230309/1‑93 (MQ=255)
                            aGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATAcc                                                             <  1:817371/93‑1 (MQ=255)
                             gCACTTCGTCAGATTTCGCCAGAATGTTAGAAACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCg                                                            <  2:1009599/93‑1 (MQ=255)
                              cACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGc                                                           <  2:3433936/93‑1 (MQ=255)
                               aCTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCt                                                          <  2:2708111/93‑1 (MQ=255)
                                cTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCtt                                                         <  2:1751106/93‑1 (MQ=255)
                                cTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCtt                                                         >  1:1564347/1‑93 (MQ=255)
                                 ttCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCttt                                                        <  1:60897/93‑1 (MQ=255)
                                   cGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCa                                                      <  1:3149138/93‑1 (MQ=255)
                                   cGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCa                                                      <  1:2975435/93‑1 (MQ=255)
                                   cGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCa                                                      >  2:2021679/1‑93 (MQ=255)
                                     tCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATa                                                    <  2:189846/93‑1 (MQ=255)
                                     tCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATa                                                    <  2:3843377/93‑1 (MQ=255)
                                     tCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATa                                                    >  2:1976709/1‑93 (MQ=255)
                                      cAGATTTCGCCAGAATGTTGTATACCGGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATAc                                                   <  2:358672/93‑1 (MQ=255)
                                      cAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATAc                                                   >  2:2383689/1‑93 (MQ=255)
                                       aGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACg                                                  >  1:3193056/1‑93 (MQ=255)
                                        gATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACgg                                                 >  2:2095829/1‑93 (MQ=255)
                                           ttCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCa                                              <  2:4194724/93‑1 (MQ=255)
                                            tCGCCAGAATGTTAGATACCCGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCAt                                             <  2:2236830/93‑1 (MQ=255)
                                               ccAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGa                                          <  1:4424380/93‑1 (MQ=255)
                                               ccAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGa                                          <  1:1282801/93‑1 (MQ=255)
                                               ccAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGa                                          >  1:2296183/1‑93 (MQ=255)
                                                cAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGaa                                         >  1:3407723/1‑93 (MQ=255)
                                                cAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGaa                                         >  1:4652207/1‑93 (MQ=255)
                                                cAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCCTTCATACGGGCATCGaa                                         >  2:943309/1‑93 (MQ=255)
                                                   aaTGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATc                                      >  1:2186487/1‑93 (MQ=255)
                                                    aTGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCa                                     <  2:1471530/93‑1 (MQ=255)
                                                    aTGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCa                                     <  2:1335845/93‑1 (MQ=255)
                                                     tGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAg                                    >  2:3648157/1‑93 (MQ=255)
                                                     tGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAg                                    >  2:1706835/1‑93 (MQ=255)
                                                       ttAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGcc                                  >  2:108604/1‑93 (MQ=255)
                                                       ttAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGcc                                  <  2:3509576/93‑1 (MQ=255)
                                                       ttAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGcc                                  >  1:428552/1‑93 (MQ=255)
                                                       ttAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATAAGcc                                  >  1:1867478/1‑93 (MQ=255)
                                                        tAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCg                                 <  1:3693281/93‑1 (MQ=255)
                                                        tAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCg                                 >  2:4632856/1‑93 (MQ=255)
                                                          gATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGa                               >  1:949946/1‑93 (MQ=255)
                                                          gATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGa                               <  2:289762/93‑1 (MQ=255)
                                                           aTACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGAc                              <  2:2529023/93‑1 (MQ=255)
                                                           aTACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGAc                              <  1:4596760/93‑1 (MQ=255)
                                                            tACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACg                             >  1:112700/1‑93 (MQ=255)
                                                            tACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACg                             >  1:725344/1‑93 (MQ=255)
                                                             acacGTTTGTTCGCCGCCGCCAGTGCCGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGCAATCATCCGGACGa                            >  2:3197338/1‑93 (MQ=255)
                                                             acacGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGa                            <  2:2971226/93‑1 (MQ=255)
                                                                cGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTc                         <  1:4523269/93‑1 (MQ=255)
                                                                cGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTc                         >  1:4163369/1‑93 (MQ=255)
                                                                  tttGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCgg                       >  1:3298778/1‑93 (MQ=255)
                                                                  tttGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCgg                       >  2:3101242/1‑93 (MQ=255)
                                                                   ttGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGga                      <  2:2435170/93‑1 (MQ=255)
                                                                   ttGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGga                      <  1:2336239/93‑1 (MQ=255)
                                                                    tGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGgac                     >  2:3262303/1‑93 (MQ=255)
                                                                      ttCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGgacga                   <  1:4500644/93‑1 (MQ=255)
                                                                      ttCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGgacga                   >  2:166855/1‑93 (MQ=255)
                                                                        cgccgccgcCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGacgacg                 <  2:4170695/93‑1 (MQ=255)
                                                                         gccgccgccAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGAcgc                <  1:1502485/93‑1 (MQ=255)
                                                                            gccgccAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGcc             >  1:2527270/1‑93 (MQ=255)
                                                                             ccgccAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCa            >  1:3510726/1‑93 (MQ=255)
                                                                                ccAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTa         >  2:303993/1‑93 (MQ=255)
                                                                                 cAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTAc        <  2:685606/93‑1 (MQ=255)
                                                                                   gTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCg      >  2:1634054/1‑93 (MQ=255)
                                                                                     gcagcgGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGcc    <  2:399834/93‑1 (MQ=255)
                                                                                       agcggcTGGATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTg  <  1:759953/93‑1 (MQ=255)
                                                                                       agcggcTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTg  <  1:402481/93‑1 (MQ=255)
                                                                                       agcggcTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTg  >  2:4443264/1‑93 (MQ=255)
                                                                                       agcggcTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTg  >  2:2145435/1‑93 (MQ=255)
                                                                                          |                                                                                         
CAGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTG  >  NC_000913/3720209‑3720388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTCAGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATG  >  NC_000913/3720207‑3720392
                                                                                            |                                                                                             
TTCAGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGG                                                                                              >  SRR4302535.2272413/1‑94 (MQ=60)
  CAGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCT                                                                                            <  SRR4302535.2647138/94‑1 (MQ=60)
  CAGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCT                                                                                            <  SRR4302535.3912207/94‑1 (MQ=60)
   AGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTG                                                                                           <  SRR4302535.1986143/94‑1 (MQ=60)
   AGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTG                                                                                           >  SRR4302535.647316/1‑94 (MQ=60)
   AGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTG                                                                                           >  SRR4302535.64222/1‑94 (MQ=60)
   AGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACAAGTTTGTTCGCCGCCGCCAGTGCAGCGGCTG                                                                                           >  SRR4302535.685119/1‑94 (MQ=60)
    GGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGC                                                                                          <  SRR4302535.234848/94‑1 (MQ=60)
      GTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCAT                                                                                        <  SRR4302535.2769049/94‑1 (MQ=60)
      GTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCAT                                                                                        <  SRR4302535.3028741/94‑1 (MQ=60)
        AGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCC                                                                                      >  SRR4302535.1347271/1‑94 (MQ=60)
        AGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCC                                                                                      >  SRR4302535.3291820/1‑94 (MQ=60)
        AGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCC                                                                                      <  SRR4302535.2315466/94‑1 (MQ=60)
        AGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCC                                                                                      >  SRR4302535.3337285/1‑94 (MQ=60)
        AGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCC                                                                                      >  SRR4302535.4254435/1‑94 (MQ=60)
         GAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCA                                                                                     <  SRR4302535.586962/94‑1 (MQ=60)
          AGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAG                                                                                    >  SRR4302535.3285606/1‑94 (MQ=60)
          AGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAG                                                                                    >  SRR4302535.4057022/1‑94 (MQ=60)
           GGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGG                                                                                   <  SRR4302535.409617/94‑1 (MQ=60)
           GGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCC‑CCAGGGCAGCGGGCGCATCCAGGG                                                                                  >  SRR4302535.3675195/1‑94 (MQ=60)
           GGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTATTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGG                                                                                   <  SRR4302535.184883/94‑1 (MQ=60)
            GCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGG                                                                                  <  SRR4302535.3493798/94‑1 (MQ=60)
            GCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGG                                                                                  <  SRR4302535.4462428/94‑1 (MQ=60)
             CATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGT                                                                                 >  SRR4302535.3805301/1‑94 (MQ=60)
             CATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGT                                                                                 >  SRR4302535.2734635/1‑94 (MQ=60)
             CATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGT                                                                                 >  SRR4302535.732242/1‑94 (MQ=60)
              ATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTA                                                                                >  SRR4302535.239354/1‑94 (MQ=60)
              ATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTA                                                                                >  SRR4302535.2690559/1‑94 (MQ=60)
              ATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTA                                                                                >  SRR4302535.1377506/1‑94 (MQ=60)
                TCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACG                                                                              <  SRR4302535.2304390/94‑1 (MQ=60)
                 CACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGG                                                                             <  SRR4302535.4256894/94‑1 (MQ=60)
                 CACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGG                                                                             >  SRR4302535.2852147/1‑94 (MQ=60)
                 CACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGG                                                                             <  SRR4302535.4453209/94‑1 (MQ=60)
                   CGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAA                                                                           <  SRR4302535.1665881/94‑1 (MQ=60)
                   CGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAA                                                                           >  SRR4302535.809445/1‑94 (MQ=60)
                    GCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAA                                                                          <  SRR4302535.2342281/94‑1 (MQ=60)
                    GCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAA                                                                          >  SRR4302535.2349760/1‑94 (MQ=60)
                     CGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAAT                                                                         >  SRR4302535.2010323/1‑94 (MQ=60)
                     CGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAAT                                                                         <  SRR4302535.2779373/94‑1 (MQ=60)
                     CGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAAT                                                                         <  SRR4302535.1516424/94‑1 (MQ=60)
                     CCGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAAT                                                                         <  SRR4302535.1062875/94‑1 (MQ=60)
                      GGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATGCACGTTTTTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATG                                                                        <  SRR4302535.4124138/94‑1 (MQ=60)
                      GGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATG                                                                        >  SRR4302535.205532/1‑94 (MQ=60)
                      GGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATG                                                                        <  SRR4302535.2318705/94‑1 (MQ=60)
                      GCTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATG                                                                        <  SRR4302535.1747681/94‑1 (MQ=60)
                       GTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGC                                                                       <  SRR4302535.236505/94‑1 (MQ=60)
                       GTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGC                                                                       <  SRR4302535.1861945/94‑1 (MQ=60)
                       GTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGC                                                                       <  SRR4302535.982536/94‑1 (MQ=60)
                       GTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGC                                                                       <  SRR4302535.4218260/94‑1 (MQ=60)
                        TCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCG                                                                      <  SRR4302535.4276166/94‑1 (MQ=60)
                        TCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCG                                                                      <  SRR4302535.293967/94‑1 (MQ=60)
                          GCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGACACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGAT                                                                    <  SRR4302535.4075669/94‑1 (MQ=60)
                           CTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATA                                                                   >  SRR4302535.3935352/1‑94 (MQ=60)
                           CTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATA                                                                   <  SRR4302535.1323901/94‑1 (MQ=60)
                            TCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATAC                                                                  <  SRR4302535.3427000/94‑1 (MQ=60)
                            TCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATAC                                                                  >  SRR4302535.2246168/1‑94 (MQ=60)
                            TCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATAC                                                                  >  SRR4302535.2208348/1‑94 (MQ=60)
                            TCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATAC                                                                  >  SRR4302535.508163/1‑94 (MQ=60)
                            TCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATAC                                                                  <  SRR4302535.3216379/94‑1 (MQ=60)
                             CAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACC                                                                 <  SRR4302535.3908491/94‑1 (MQ=60)
                              AGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCG                                                                <  SRR4302535.823107/94‑1 (MQ=60)
                                CACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCT                                                              >  SRR4302535.2709877/1‑94 (MQ=60)
                                 ACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTT                                                             >  SRR4302535.1575639/1‑94 (MQ=60)
                                  CTTCGTCAGATTTCTCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTT                                                            <  SRR4302535.743241/94‑1 (MQ=60)
                                  CTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTT                                                            <  SRR4302535.3436668/94‑1 (MQ=60)
                                  CTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTT                                                            >  SRR4302535.4676608/1‑94 (MQ=60)
                                  CTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTT                                                            >  SRR4302535.1900450/1‑94 (MQ=60)
                                  CTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTA                                                            >  SRR4302535.4532780/1‑94 (MQ=60)
                                   TTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTC                                                           >  SRR4302535.4598686/1‑94 (MQ=60)
                                   TTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTC                                                           <  SRR4302535.61350/94‑1 (MQ=60)
                                   TTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTC                                                           <  SRR4302535.3015676/94‑1 (MQ=60)
                                     CGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCAT                                                         <  SRR4302535.2996315/94‑1 (MQ=60)
                                     CGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCAT                                                         >  SRR4302535.433401/1‑94 (MQ=60)
                                     CGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCAT                                                         <  SRR4302535.3171030/94‑1 (MQ=60)
                                     CGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCAT                                                         >  SRR4302535.1372807/1‑94 (MQ=60)
                                     CGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCAT                                                         >  SRR4302535.1358504/1‑94 (MQ=60)
                                     CGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCAT                                                         >  SRR4302535.2569992/1‑94 (MQ=60)
                                      GTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATA                                                        <  SRR4302535.3543380/94‑1 (MQ=60)
                                       TCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATAC                                                       <  SRR4302535.3993784/94‑1 (MQ=60)
                                        CAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACG                                                      >  SRR4302535.3215144/1‑94 (MQ=60)
                                         AGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGG                                                     <  SRR4302535.1480078/94‑1 (MQ=60)
                                         AGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGG                                                     <  SRR4302535.1625207/94‑1 (MQ=60)
                                         AGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGG                                                     >  SRR4302535.4198989/1‑94 (MQ=60)
                                         AGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGG                                                     <  SRR4302535.1989121/94‑1 (MQ=60)
                                         AGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGG                                                     >  SRR4302535.2058/1‑94 (MQ=60)
                                          GATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGCACGGAAATGCGATACCGCTTTCATACGGG                                                    >  SRR4302535.4132852/1‑94 (MQ=60)
                                            TTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCA                                                  >  SRR4302535.59653/1‑94 (MQ=60)
                                               CGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCGTCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCG                                               <  SRR4302535.659414/94‑1 (MQ=60)
                                               CGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCG                                               <  SRR4302535.271700/94‑1 (MQ=60)
                                               CGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCG                                               <  SRR4302535.2177958/94‑1 (MQ=60)
                                               CGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCG                                               >  SRR4302535.1878297/1‑94 (MQ=60)
                                                GCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGA                                              >  SRR4302535.2312615/1‑94 (MQ=60)
                                                 CCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAA                                             <  SRR4302535.4454682/94‑1 (MQ=60)
                                                 CCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAA                                             <  SRR4302535.1291950/94‑1 (MQ=60)
                                                 CCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAA                                             >  SRR4302535.4683706/1‑94 (MQ=60)
                                                 CCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAA                                             >  SRR4302535.3188978/1‑94 (MQ=60)
                                                 CCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAA                                             >  SRR4302535.3431444/1‑94 (MQ=60)
                                                  CAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAA                                            >  SRR4302535.4605184/1‑94 (MQ=60)
                                                  CAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAA                                            >  SRR4302535.2932999/1‑94 (MQ=60)
                                                   AGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAAT                                           <  SRR4302535.3842190/94‑1 (MQ=60)
                                                   AGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAAT                                           <  SRR4302535.637053/94‑1 (MQ=60)
                                                    GAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATC                                          >  SRR4302535.2202067/1‑94 (MQ=60)
                                                    GAATGTTAGATACACGTTTGTGCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATC                                          <  SRR4302535.1575103/94‑1 (MQ=60)
                                                     AATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCA                                         <  SRR4302535.2019889/94‑1 (MQ=60)
                                                      ATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAG                                        >  SRR4302535.3200262/1‑94 (MQ=60)
                                                        GTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCC                                      <  SRR4302535.2168396/94‑1 (MQ=60)
                                                        GTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCC                                      >  SRR4302535.431532/1‑94 (MQ=60)
                                                        GTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCC                                      >  SRR4302535.3301205/1‑94 (MQ=60)
                                                        GTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATAAGCC                                      >  SRR4302535.1880938/1‑94 (MQ=60)
                                                         TTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCG                                     <  SRR4302535.1166309/94‑1 (MQ=60)
                                                         TTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTCTCATACGGGCATCGAAATCAGCCG                                     >  SRR4302535.128008/1‑94 (MQ=60)
                                                          TAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGG                                    <  SRR4302535.3718843/94‑1 (MQ=60)
                                                          TAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGG                                    >  SRR4302535.867304/1‑94 (MQ=60)
                                                           AGATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGA                                   >  SRR4302535.956672/1‑94 (MQ=60)
                                                            GATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGAC                                  <  SRR4302535.1332468/94‑1 (MQ=60)
                                                             ATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACG                                 <  SRR4302535.4628033/94‑1 (MQ=60)
                                                             ATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACG                                 >  SRR4302535.730434/1‑94 (MQ=60)
                                                             ATACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACG                                 >  SRR4302535.113491/1‑94 (MQ=60)
                                                              TACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGA                                <  SRR4302535.3035137/94‑1 (MQ=60)
                                                              TACACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGGACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGA                                >  SRR4302535.1978017/1‑94 (MQ=60)
                                                                CACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGT                              <  SRR4302535.928341/94‑1 (MQ=60)
                                                                 ACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTC                             <  SRR4302535.3224024/94‑1 (MQ=60)
                                                                 ACGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTC                             >  SRR4302535.4191873/1‑94 (MQ=60)
                                                                  CGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCG                            >  SRR4302535.14280/1‑94 (MQ=60)
                                                                  CGTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCG                            <  SRR4302535.4554260/94‑1 (MQ=60)
                                                                   GTTTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGG                           >  SRR4302535.3321720/1‑94 (MQ=60)
                                                                     TTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGAC                         <  SRR4302535.3003776/94‑1 (MQ=60)
                                                                     TTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGAC                         <  SRR4302535.510653/94‑1 (MQ=60)
                                                                     TTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGAC                         <  SRR4302535.2352956/94‑1 (MQ=60)
                                                                     TTGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGAC                         <  SRR4302535.4646348/94‑1 (MQ=60)
                                                                      TGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACG                        >  SRR4302535.957099/1‑94 (MQ=60)
                                                                      TGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACG                        >  SRR4302535.595270/1‑94 (MQ=60)
                                                                      TGTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACG                        <  SRR4302535.1587072/94‑1 (MQ=60)
                                                                       GTTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGA                       >  SRR4302535.1106676/1‑94 (MQ=60)
                                                                        TTCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGAC                      <  SRR4302535.4531553/94‑1 (MQ=60)
                                                                         TCGCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACG                     <  SRR4302535.3092620/94‑1 (MQ=60)
                                                                           GCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCG                   <  SRR4302535.1513294/94‑1 (MQ=60)
                                                                           GCCGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCG                   >  SRR4302535.1773064/1‑94 (MQ=60)
                                                                             CGCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCC                 >  SRR4302535.2545476/1‑94 (MQ=60)
                                                                              GCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCA                >  SRR4302535.3535121/1‑94 (MQ=60)
                                                                              GCCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCA                >  SRR4302535.3917089/1‑94 (MQ=60)
                                                                               CCGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAG               >  SRR4302535.110263/1‑94 (MQ=60)
                                                                                CGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGT              >  SRR4302535.2000610/1‑94 (MQ=60)
                                                                                CGCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGT              >  SRR4302535.2276709/1‑94 (MQ=60)
                                                                                 GCCAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTA             <  SRR4302535.4535692/94‑1 (MQ=60)
                                                                                   CAGTGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACC           >  SRR4302535.3973745/1‑94 (MQ=60)
                                                                                      TGCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCC        >  SRR4302535.797003/1‑94 (MQ=60)
                                                                                       GCAGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCT       <  SRR4302535.4527914/94‑1 (MQ=60)
                                                                                         AGCGGCTGGATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGG     <  SRR4302535.765307/94‑1 (MQ=60)
                                                                                         AGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGG     <  SRR4302535.405303/94‑1 (MQ=60)
                                                                                         AGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGG     >  SRR4302535.358257/1‑94 (MQ=60)
                                                                                         AGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGG     >  SRR4302535.2302223/1‑94 (MQ=60)
                                                                                         AGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGG     <  SRR4302535.2233241/94‑1 (MQ=60)
                                                                                         AGCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGG     >  SRR4302535.1730579/1‑94 (MQ=60)
                                                                                          GCGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGA    <  SRR4302535.4442794/94‑1 (MQ=60)
                                                                                           CGGCTGCATCCAGGGTAGGGAAATGCTATACCGCTTTCATACGGAAATAGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGAT   <  SRR4302535.3994728/94‑1 (MQ=60)
                                                                                           CGGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGAT   <  SRR4302535.4389723/94‑1 (MQ=60)
                                                                                            GGCTGCGTCCAGGGTACGGAAATGCGATACCGTTTTCATACGGGCATCGAAATCGGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATG  <  SRR4302535.99576/94‑1 (MQ=60)
                                                                                            GGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATG  <  SRR4302535.2566659/94‑1 (MQ=60)
                                                                                            GGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATG  >  SRR4302535.4496372/1‑94 (MQ=60)
                                                                                            |                                                                                             
TTCAGGGTAGAGGCATTCACGCGGTCGCTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATG  >  NC_000913/3720207‑3720392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑