Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,724,581	T→C	Q137R (CAG→CGG)	yiaA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,724,581	0	T	C	99.8%	1425.6 / ‑5.5	452	Q137R (CAG→CGG)	yiaA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (235/216); total (235/217)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.00e-01

Only 100 of 471 total aligned reads displayed.

AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA  >  NC_000913/3724491‑3724670

aGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCcgt                                                                                         <  1:453102/93‑1 (MQ=255)

 gAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCcgtg                                                                                        >  1:344730/1‑93 (MQ=255)

  aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt                                                                                       <  2:1804452/93‑1 (MQ=255)

  aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt                                                                                       <  2:1166144/93‑1 (MQ=255)

  aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt                                                                                       >  2:6353211/1‑93 (MQ=255)

   aaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGtt                                                                                      <  1:4924277/93‑1 (MQ=255)

     cAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTc                                                                                    <  1:206796/93‑1 (MQ=255)

     cAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTc                                                                                    >  2:1464058/1‑93 (MQ=255)

       gATTAGTGTGTTACGTAAAAGCCCGGTCACATTGGACGGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCATGGGTAACCCGTGTTTCtt                                                                                  <  1:3349823/93‑1 (MQ=255)

       gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt                                                                                  >  1:1623648/1‑93 (MQ=255)

         ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt                                                                                >  1:2846889/1‑93 (MQ=255)

         ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt                                                                                >  1:1485384/1‑93 (MQ=255)

           aGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtgg                                                                              <  2:3632883/93‑1 (MQ=255)

            gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggt                                                                             >  2:423261/1‑93 (MQ=255)

            gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggt                                                                             >  2:3995781/1‑93 (MQ=255)

             tGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtg                                                                            >  1:2591380/1‑93 (MQ=255)

              gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg                                                                           <  2:6735232/93‑1 (MQ=255)

              gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg                                                                           <  2:5460813/93‑1 (MQ=255)

              gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg                                                                           <  1:6589578/93‑1 (MQ=255)

               aGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTggg                                                                          >  1:6313533/1‑93 (MQ=255)

                gtgaaGTAAAAGCCGGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGt                                                                         <  1:5264048/90‑1 (MQ=255)

                gTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGTTGGGt                                                                         >  1:4761777/1‑93 (MQ=255)

                gTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGt                                                                         >  1:7930312/1‑93 (MQ=255)

                gTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGt                                                                         >  1:817944/1‑93 (MQ=255)

                 ttAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGtt                                                                        >  1:5467178/1‑93 (MQ=255)

                   aaGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTa                                                                      >  2:2679500/1‑93 (MQ=255)

                      tAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTc                                                                   <  1:5404902/93‑1 (MQ=255)

                       aaaaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTcc                                                                  >  1:1747891/1‑93 (MQ=255)

                        aaaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCg                                                                 >  2:4859930/1‑93 (MQ=255)

                        aaaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCg                                                                 >  2:5337619/1‑93 (MQ=255)

                        aaaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCg                                                                 >  2:7332955/1‑93 (MQ=255)

                         aaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCgg                                                                <  1:1994534/93‑1 (MQ=255)

                         aaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCgg                                                                >  2:2370615/1‑93 (MQ=255)

                           gCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCa                                                              >  1:5570498/1‑93 (MQ=255)

                            cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAt                                                             >  2:2227313/1‑93 (MQ=255)

                            cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAt                                                             <  2:888405/93‑1 (MQ=255)

                            cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAt                                                             <  1:4145981/93‑1 (MQ=255)

                             ccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATc                                                            >  1:4410375/1‑93 (MQ=255)

                              cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa                                                           >  1:510599/1‑93 (MQ=255)

                               ggTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAc                                                          >  1:7379701/1‑93 (MQ=255)

                                gTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACg                                                         >  1:2306004/1‑93 (MQ=255)

                                  cacaTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGaa                                                       <  2:7128586/93‑1 (MQ=255)

                                  cacaTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGaa                                                       <  2:7631100/93‑1 (MQ=255)

                                  cacaTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGaa                                                       >  1:733651/1‑93 (MQ=255)

                                   tcaTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAat                                                      <  2:4162304/92‑1 (MQ=255)

                                   acaTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAat                                                      >  1:4279504/1‑93 (MQ=255)

                                   acaTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAat                                                      <  2:1274525/93‑1 (MQ=255)

                                    caTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAata                                                     <  1:5825522/93‑1 (MQ=255)

                                     aTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAatat                                                    >  1:1139684/1‑93 (MQ=255)

                                     aTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAatat                                                    <  1:6892312/93‑1 (MQ=255)

                                     aTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAatat                                                    >  1:6010686/1‑93 (MQ=255)

                                     aTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAatat                                                    >  1:241087/1‑93 (MQ=255)

                                      ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtt                                                   >  2:3724538/1‑93 (MQ=255)

                                      ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtt                                                   >  2:7516176/1‑93 (MQ=255)

                                        ggACTGACCGGGCTTACGTGATTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt                                                 >  1:1380611/1‑93 (MQ=255)

                                        ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt                                                 <  2:4449005/93‑1 (MQ=255)

                                             gACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGc                                            >  2:4389227/1‑93 (MQ=255)

                                              aCCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCa                                           <  1:1825584/93‑1 (MQ=255)

                                                  ggCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGc                                       >  1:764523/1‑93 (MQ=255)

                                                  ggCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGc                                       >  2:1998166/1‑93 (MQ=255)

                                                     ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc                                    >  2:6878417/1‑93 (MQ=255)

                                                     ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc                                    >  1:2749052/1‑93 (MQ=255)

                                                     ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc                                    >  2:3296999/1‑93 (MQ=255)

                                                     ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc                                    <  2:4177950/93‑1 (MQ=255)

                                                      tACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACt                                   >  2:7805612/1‑93 (MQ=255)

                                                        cGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGc                                 >  2:1324672/1‑93 (MQ=255)

                                                        cGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGc                                 >  1:5149202/1‑93 (MQ=255)

                                                         gTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGGTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCa                                >  1:3814414/1‑93 (MQ=255)

                                                          tGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAc                               >  2:6143485/1‑93 (MQ=255)

                                                             gTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaa                            >  1:463558/1‑93 (MQ=255)

                                                              ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa                           >  2:2167679/1‑93 (MQ=255)

                                                              ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa                           >  1:7487109/1‑93 (MQ=255)

                                                               tATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc                          >  2:6003022/1‑93 (MQ=255)

                                                                aTTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACa                         >  1:7836766/1‑93 (MQ=255)

                                                                 ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa                        >  1:1328589/1‑93 (MQ=255)

                                                                 ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa                        >  2:4651666/1‑93 (MQ=255)

                                                                    gCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCt                     <  2:1739325/93‑1 (MQ=255)

                                                                    gCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCAGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCt                     >  2:5584453/1‑93 (MQ=255)

                                                                    gCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTAGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCt                     <  1:6364067/93‑1 (MQ=255)

                                                                      tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa                   >  1:7142551/1‑93 (MQ=255)

                                                                      tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa                   >  1:5655307/1‑93 (MQ=255)

                                                                      tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa                   >  2:5873232/1‑93 (MQ=255)

                                                                        tATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaag                 <  2:2864902/93‑1 (MQ=255)

                                                                         aTTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaaga                <  2:4542043/93‑1 (MQ=255)

                                                                          ttcttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaagaa               <  1:3207916/93‑1 (MQ=255)

                                                                            cttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAagaaga             <  1:7901450/93‑1 (MQ=255)

                                                                             ttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAgaagaa            >  1:1041489/1‑93 (MQ=255)

                                                                              tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa           <  1:2704265/93‑1 (MQ=255)

                                                                              tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa           >  1:4037155/1‑93 (MQ=255)

                                                                               ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg          <  2:5158237/93‑1 (MQ=255)

                                                                               ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg          <  1:6176650/93‑1 (MQ=255)

                                                                                cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc         <  2:7685455/93‑1 (MQ=255)

                                                                                cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc         >  1:3945281/1‑93 (MQ=255)

                                                                                 tGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGcc        >  2:5701154/1‑93 (MQ=255)

                                                                                 tGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGcc        >  1:4349081/1‑93 (MQ=255)

                                                                                   ggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAg      >  2:7161582/1‑93 (MQ=255)

                                                                                     tAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTc    <  1:3641515/93‑1 (MQ=255)

                                                                                     tAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTc    <  2:3242310/93‑1 (MQ=255)

                                                                                      aaCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTcc   <  2:1670805/93‑1 (MQ=255)

                                                                                       aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa  <  2:2994433/93‑1 (MQ=255)

AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA  >  NC_000913/3724491‑3724670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 262 total aligned reads displayed.

GACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAAA  >  NC_000913/3724488‑3724674

GACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCC                                                                                               >  SRR4302543.4604885/1‑94 (MQ=60)

GACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCC                                                                                               <  SRR4302543.7545434/94‑1 (MQ=60)

 ACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCG                                                                                              >  SRR4302543.4299776/1‑94 (MQ=60)

  CAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGT                                                                                             >  SRR4302543.1570172/1‑94 (MQ=60)

  CAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATGGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGT                                                                                             <  SRR4302543.7772749/94‑1 (MQ=60)

   AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTG                                                                                            >  SRR4302543.4941722/1‑94 (MQ=60)

   AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTG                                                                                            >  SRR4302543.4941723/1‑94 (MQ=60)

   AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTG                                                                                            >  SRR4302543.347918/1‑94 (MQ=60)

   AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGATGTATTCTTCCTGGGTAACCCGTG                                                                                            >  SRR4302543.4848228/1‑94 (MQ=60)

     AAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTT                                                                                          >  SRR4302543.2832368/1‑94 (MQ=60)

     AAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTT                                                                                          <  SRR4302543.1976242/94‑1 (MQ=60)

      AACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTT                                                                                         <  SRR4302543.4969138/94‑1 (MQ=60)

        CAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCT                                                                                       <  SRR4302543.6115464/94‑1 (MQ=60)

        CAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCT                                                                                       <  SRR4302543.208551/94‑1 (MQ=60)

        CAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCT                                                                                       <  SRR4302543.4650448/94‑1 (MQ=60)

         AGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTT                                                                                      >  SRR4302543.1638118/1‑94 (MQ=60)

          GATTAGTGTGTTACGTAAAAGCCCGGTCACATTGGACGGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCATGGGTAACCCGTGTTTCTTT                                                                                     <  SRR4302543.3379985/94‑1 (MQ=60)

          GATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTT                                                                                     <  SRR4302543.2598810/94‑1 (MQ=60)

          GAGTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTT                                                                                     <  SRR4302543.5553920/94‑1 (MQ=60)

           ATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTT                                                                                    >  SRR4302543.5305673/1‑94 (MQ=60)

           ATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTT                                                                                    >  SRR4302543.1498756/1‑94 (MQ=60)

           ATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTT                                                                                    >  SRR4302543.2872882/1‑94 (MQ=60)

           ATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTG                                                                                    >  SRR4302543.5436793/1‑94 (MQ=60)

            TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG                                                                                   <  SRR4302543.4750395/94‑1 (MQ=60)

            TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG                                                                                   >  SRR4302543.759982/1‑94 (MQ=60)

            TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG                                                                                   <  SRR4302543.1991594/94‑1 (MQ=60)

             TAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGG                                                                                  <  SRR4302543.2047578/94‑1 (MQ=60)

              AGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGT                                                                                 >  SRR4302543.3428956/1‑94 (MQ=60)

              AGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGT                                                                                 <  SRR4302543.7504630/94‑1 (MQ=60)

               GTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTG                                                                                >  SRR4302543.2614928/1‑94 (MQ=60)

               GTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTG                                                                                >  SRR4302543.246994/1‑94 (MQ=60)

                 GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG                                                                              <  SRR4302543.2768114/94‑1 (MQ=60)

                 GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG                                                                              >  SRR4302543.6372910/1‑94 (MQ=60)

                 GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG                                                                              <  SRR4302543.5860138/94‑1 (MQ=60)

                 GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG                                                                              <  SRR4302543.5654840/94‑1 (MQ=60)

                 GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG                                                                              <  SRR4302543.6651660/94‑1 (MQ=60)

                 GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG                                                                              <  SRR4302543.1517042/94‑1 (MQ=60)

                 GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG                                                                              <  SRR4302543.4790156/94‑1 (MQ=60)

                 GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCGTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG                                                                              >  SRR4302543.3312711/1‑94 (MQ=60)

                  AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGTTGGGT                                                                             >  SRR4302543.4805289/1‑94 (MQ=60)

                  AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT                                                                             >  SRR4302543.2938760/1‑94 (MQ=60)

                  AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT                                                                             >  SRR4302543.8004765/1‑94 (MQ=60)

                   GTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTT                                                                            >  SRR4302543.5516713/1‑94 (MQ=60)

                   GTGAAGTAAAAGCCGGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTT                                                                            <  SRR4302543.5311541/94‑1 (MQ=60)

                    TTAAGTAAAATCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTT                                                                           <  SRR4302543.2204883/94‑1 (MQ=60)

                     TAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCGTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTA                                                                          <  SRR4302543.6382879/94‑1 (MQ=60)

                      AAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTAT                                                                         <  SRR4302543.7718380/94‑1 (MQ=60)

                      AAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAT                                                                         <  SRR4302543.4281442/94‑1 (MQ=60)

                      AAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAT                                                                         >  SRR4302543.1823595/1‑94 (MQ=60)

                      AAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAT                                                                         <  SRR4302543.5558717/94‑1 (MQ=60)

                       AGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATT                                                                        >  SRR4302543.2033968/1‑94 (MQ=60)

                       AGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATT                                                                        >  SRR4302543.1248395/1‑94 (MQ=60)

                        GTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTC                                                                       <  SRR4302543.1947532/94‑1 (MQ=60)

                        GTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTC                                                                       >  SRR4302543.3793223/1‑94 (MQ=60)

                         TAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCC                                                                      <  SRR4302543.5454038/94‑1 (MQ=60)

                         TAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCC                                                                      >  SRR4302543.1810957/1‑94 (MQ=60)

                         TAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCC                                                                      >  SRR4302543.33199/1‑94 (MQ=60)

                          AAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCG                                                                     <  SRR4302543.2041952/94‑1 (MQ=60)

                          AAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCG                                                                     <  SRR4302543.403808/94‑1 (MQ=60)

                          AAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCG                                                                     <  SRR4302543.7434871/94‑1 (MQ=60)

                           AAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGG                                                                    >  SRR4302543.1382814/1‑94 (MQ=60)

                             AGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCA                                                                  >  SRR4302543.5621188/1‑94 (MQ=60)

                             AGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCA                                                                  <  SRR4302543.1135821/94‑1 (MQ=60)

                             AGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCA                                                                  <  SRR4302543.7409620/94‑1 (MQ=60)

                             AGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCA                                                                  >  SRR4302543.5034014/1‑94 (MQ=60)

                              GCCCGGTGACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAT                                                                 <  SRR4302543.4228715/94‑1 (MQ=60)

                              GCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAT                                                                 <  SRR4302543.7346569/94‑1 (MQ=60)

                              GCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAT                                                                 <  SRR4302543.7533140/94‑1 (MQ=60)

                               CCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATC                                                                >  SRR4302543.4450348/1‑94 (MQ=60)

                               CCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATC                                                                <  SRR4302543.4183448/94‑1 (MQ=60)

                                CCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCA                                                               >  SRR4302543.515347/1‑94 (MQ=60)

                                CCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCA                                                               <  SRR4302543.1708523/94‑1 (MQ=60)

                                 CGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAC                                                              >  SRR4302543.7450632/1‑94 (MQ=60)

                                 CGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAC                                                              >  SRR4302543.7450631/1‑94 (MQ=60)

                                  GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG                                                             >  SRR4302543.4033537/1‑94 (MQ=60)

                                  GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG                                                             >  SRR4302543.4583634/1‑94 (MQ=60)

                                  GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG                                                             >  SRR4302543.5001596/1‑94 (MQ=60)

                                  GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG                                                             >  SRR4302543.2327009/1‑94 (MQ=60)

                                  GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG                                                             <  SRR4302543.5474008/94‑1 (MQ=60)

                                   GTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGA                                                            <  SRR4302543.1052179/94‑1 (MQ=60)

                                   GTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGA                                                            >  SRR4302543.220521/1‑94 (MQ=60)

                                    TCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAA                                                           <  SRR4302543.3650614/94‑1 (MQ=60)

                                    TCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAA                                                           <  SRR4302543.1590772/94‑1 (MQ=60)

                                    TCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAA                                                           >  SRR4302543.740223/1‑94 (MQ=60)

                                     CACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGACT                                                          >  SRR4302543.4446815/1‑94 (MQ=60)

                                     CACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAAT                                                          >  SRR4302543.3010403/1‑94 (MQ=60)

                                     CACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAAT                                                          >  SRR4302543.5176924/1‑94 (MQ=60)

                                     CACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAAT                                                          >  SRR4302543.4318400/1‑94 (MQ=60)

                                      ACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATA                                                         >  SRR4302543.7738259/1‑94 (MQ=60)

                                      ACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATA                                                         >  SRR4302543.4380266/1‑94 (MQ=60)

                                       CATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCCTCACGAATAT                                                        >  SRR4302543.817287/1‑94 (MQ=60)

                                       CATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAT                                                        >  SRR4302543.243175/1‑94 (MQ=60)

                                       CATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAT                                                        <  SRR4302543.7526778/94‑1 (MQ=60)

                                       CATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAT                                                        >  SRR4302543.817288/1‑94 (MQ=60)

                                        ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT                                                       >  SRR4302543.5357989/1‑94 (MQ=60)

                                        ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT                                                       <  SRR4302543.6957110/94‑1 (MQ=60)

                                        ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT                                                       <  SRR4302543.706885/94‑1 (MQ=60)

                                         TTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTT                                                      <  SRR4302543.1937282/94‑1 (MQ=60)

                                          TGGACTGACCGGGCTTACGTGATTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTT                                                     >  SRR4302543.1393027/1‑94 (MQ=60)

                                          TGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTT                                                     <  SRR4302543.4358873/94‑1 (MQ=60)

                                          TGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTT                                                     <  SRR4302543.561772/94‑1 (MQ=60)

                                          TGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTT                                                     <  SRR4302543.1363281/94‑1 (MQ=60)

                                           GGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTT                                                    >  SRR4302543.3331080/1‑94 (MQ=60)

                                           GGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTT                                                    <  SRR4302543.6348506/94‑1 (MQ=60)

                                            GACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTT                                                   >  SRR4302543.5652263/1‑94 (MQ=60)

                                            GACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTC                                                   <  SRR4302543.4747816/94‑1 (MQ=60)

                                             GCTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCT                                                  <  SRR4302543.2714121/94‑1 (MQ=60)

                                             ACTTACCGTGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCT                                                  <  SRR4302543.6416616/94‑1 (MQ=60)

                                             ACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCT                                                  <  SRR4302543.2385039/94‑1 (MQ=60)

                                             ACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCT                                                  <  SRR4302543.6163777/94‑1 (MQ=60)

                                             ACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCT                                                  <  SRR4302543.6473991/94‑1 (MQ=60)

                                             ACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCT                                                  <  SRR4302543.6817945/94‑1 (MQ=60)

                                                 ACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAC                                              >  SRR4302543.1494960/1‑94 (MQ=60)

                                                    GGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGC                                           >  SRR4302543.1698742/1‑94 (MQ=60)

                                                    GGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGC                                           >  SRR4302543.771252/1‑94 (MQ=60)

                                                    GGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAGTCCGGCATCACGAATATTTTTCTGCACCGC                                           >  SRR4302543.3832306/1‑94 (MQ=60)

                                                      GCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTA                                         >  SRR4302543.3914196/1‑94 (MQ=60)

                                                      GCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTA                                         >  SRR4302543.3914195/1‑94 (MQ=60)

                                                       CTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAC                                        >  SRR4302543.4692747/1‑94 (MQ=60)

                                                       CTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAC                                        <  SRR4302543.1338102/94‑1 (MQ=60)

                                                        TTACGAGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACT                                       >  SRR4302543.7134099/1‑94 (MQ=60)

                                                         TACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTG                                      >  SRR4302543.1106892/1‑94 (MQ=60)

                                                          ACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGC                                     <  SRR4302543.36291/94‑1 (MQ=60)

                                                          ACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGC                                     <  SRR4302543.5694247/94‑1 (MQ=60)

                                                          ACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGC                                     >  SRR4302543.5195745/1‑94 (MQ=60)

                                                           CGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCA                                    >  SRR4302543.4416876/1‑94 (MQ=60)

                                                           CGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCA                                    >  SRR4302543.7645842/1‑94 (MQ=60)

                                                           CGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCA                                    >  SRR4302543.6028068/1‑94 (MQ=60)

                                                           CGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGGTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCA                                    >  SRR4302543.3848040/1‑94 (MQ=60)

                                                            GTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAC                                   >  SRR4302543.4603460/1‑94 (MQ=60)

                                                            GTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAC                                   >  SRR4302543.4214072/1‑94 (MQ=60)

                                                            GTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAC                                   <  SRR4302543.6029131/94‑1 (MQ=60)

                                                             TGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACC                                  <  SRR4302543.819536/94‑1 (MQ=60)

                                                             TGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACC                                  >  SRR4302543.7823912/1‑94 (MQ=60)

                                                                GTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAA                               >  SRR4302543.7558751/1‑94 (MQ=60)

                                                                 TTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAC                              <  SRR4302543.414326/94‑1 (MQ=60)

                                                                  TATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACA                             >  SRR4302543.7910529/1‑94 (MQ=60)

                                                                  TATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACA                             >  SRR4302543.7910530/1‑94 (MQ=60)

                                                                   ATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAA                            <  SRR4302543.2526959/94‑1 (MQ=60)

                                                                   ATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAA                            >  SRR4302543.1340429/1‑94 (MQ=60)

                                                                   ATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAA                            <  SRR4302543.5256648/94‑1 (MQ=60)

                                                                     TCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGC                          <  SRR4302543.4479312/94‑1 (MQ=60)

                                                                      CGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCT                         >  SRR4302543.7304708/1‑94 (MQ=60)

                                                                      CGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCT                         <  SRR4302543.6808896/94‑1 (MQ=60)

                                                                      CGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCT                         >  SRR4302543.3790692/1‑94 (MQ=60)

                                                                       GCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTT                        >  SRR4302543.2237344/1‑94 (MQ=60)

                                                                       GCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTT                        >  SRR4302543.6454336/1‑94 (MQ=60)

                                                                       GCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTAGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTT                        <  SRR4302543.6423911/94‑1 (MQ=60)

                                                                        CTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGTCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTA                       >  SRR4302543.3059947/1‑94 (MQ=60)

                                                                        CTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTA                       >  SRR4302543.7211953/1‑94 (MQ=60)

                                                                        CTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTA                       <  SRR4302543.1827553/94‑1 (MQ=60)

                                                                        CTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTA                       >  SRR4302543.4493295/1‑94 (MQ=60)

                                                                        CTGTATTCTTCCTGGGTAACCCGTGATTCTTTTGGTGGGTTTATTCCGGCCTCACGAATATTTTTCTGTACCGCTACTGCCCCAACCCAGCTTA                       >  SRR4302543.5706872/1‑94 (MQ=60)

                                                                        CTGTATTCTGCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTA                       <  SRR4302543.1414497/94‑1 (MQ=60)

                                                                         TGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAA                      <  SRR4302543.7963711/94‑1 (MQ=60)

                                                                         TGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAA                      <  SRR4302543.4110073/94‑1 (MQ=60)

                                                                          GTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG                     <  SRR4302543.265452/94‑1 (MQ=60)

                                                                          GTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG                     <  SRR4302543.3662115/94‑1 (MQ=60)

                                                                          GTATTCTTCCTGGGTAACCCGTGTTTCTTTTCGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG                     >  SRR4302543.5950468/1‑94 (MQ=60)

                                                                           TATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTCTTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGA                    >  SRR4302543.7994090/1‑94 (MQ=60)

                                                                           TATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGA                    >  SRR4302543.7994092/1‑94 (MQ=60)

                                                                           TATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGA                    <  SRR4302543.1669392/94‑1 (MQ=60)

                                                                            ATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAA                   >  SRR4302543.608646/1‑94 (MQ=60)

                                                                             TTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAG                  <  SRR4302543.2750494/94‑1 (MQ=60)

                                                                             TTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAG                  <  SRR4302543.3236870/94‑1 (MQ=60)

                                                                               TTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA                <  SRR4302543.6851145/94‑1 (MQ=60)

                                                                               CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA                >  SRR4302543.1050770/1‑94 (MQ=60)

                                                                               CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA                <  SRR4302543.7975722/94‑1 (MQ=60)

                                                                               CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA                >  SRR4302543.5840411/1‑94 (MQ=60)

                                                                               CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA                <  SRR4302543.7975721/94‑1 (MQ=60)

                                                                               CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA                >  SRR4302543.7290879/1‑94 (MQ=60)

                                                                               CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA                <  SRR4302543.518217/94‑1 (MQ=60)

                                                                               CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA                <  SRR4302543.5892432/94‑1 (MQ=60)

                                                                                TTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAA               >  SRR4302543.1349104/1‑94 (MQ=60)

                                                                                 TCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAG              <  SRR4302543.2664670/94‑1 (MQ=60)

                                                                                 TCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAG              <  SRR4302543.6559807/94‑1 (MQ=60)

                                                                                 TCCTGGGTAACCCGTGTTGCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAG              <  SRR4302543.2728804/94‑1 (MQ=60)

                                                                                  CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC             <  SRR4302543.6235049/94‑1 (MQ=60)

                                                                                  CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC             >  SRR4302543.3980164/1‑94 (MQ=60)

                                                                                  CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC             >  SRR4302543.4492594/1‑94 (MQ=60)

                                                                                   CTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCC            <  SRR4302543.34639/94‑1 (MQ=60)

                                                                                   CTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCC            >  SRR4302543.4388503/1‑94 (MQ=60)

                                                                                    TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA           <  SRR4302543.6283785/94‑1 (MQ=60)

                                                                                    TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA           <  SRR4302543.5152062/94‑1 (MQ=60)

                                                                                    TGGGTAACCCGTGTTTCTTTTGGAGGGCTTATTCCTGCATCACGAATATTTTTCTGCACCGCTACTGCACCACACAAGCTTAAGAAGAAAGCCA           >  SRR4302543.4145685/1‑94 (MQ=60)

                                                                                      GGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGT         <  SRR4302543.2844938/94‑1 (MQ=60)

                                                                                      GGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGT         >  SRR4302543.1164840/1‑94 (MQ=60)

                                                                                       GTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTC        >  SRR4302543.2408408/1‑94 (MQ=60)

                                                                                        TAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCC       <  SRR4302543.3673552/94‑1 (MQ=60)

                                                                                        TAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCC       <  SRR4302543.5401058/94‑1 (MQ=60)

                                                                                         AACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA      <  SRR4302543.5461469/94‑1 (MQ=60)

                                                                                         AACCAGTGTTTCTTTTGGGGGGTTTAGTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA      <  SRR4302543.4000356/94‑1 (MQ=60)

                                                                                          ACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT     <  SRR4302543.2782956/94‑1 (MQ=60)

                                                                                          ACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT     <  SRR4302543.6246759/94‑1 (MQ=60)

                                                                                           CCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATA    >  SRR4302543.4099136/1‑94 (MQ=60)

                                                                                           CCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATA    >  SRR4302543.5220514/1‑94 (MQ=60)

                                                                                           CCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATA    <  SRR4302543.2270494/94‑1 (MQ=60)

                                                                                           CCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATA    <  SRR4302543.1605235/94‑1 (MQ=60)

                                                                                            CCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAA   <  SRR4302543.6509882/94‑1 (MQ=60)

                                                                                             CGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAAA  >  SRR4302543.5243508/1‑94 (MQ=60)

GACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAAA  >  NC_000913/3724488‑3724674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`