Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,724,581 |
T→C |
Q137R (CAG→CGG) |
yiaA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,724,581 | 0 | T | C | 100.0%
| 764.6
/ NA
| 241 | Q137R (CAG→CGG) | yiaA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/132); total (109/132) |
Only 100 of 251 total aligned reads displayed.
AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA > NC_000913/3724491‑3724670
|
aGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCcgt > 1:3480650/1‑93 (MQ=255)
gAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCcgtg < 2:1460020/93‑1 (MQ=255)
aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt > 2:4462798/1‑93 (MQ=255)
aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt > 2:1848768/1‑93 (MQ=255)
aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt < 1:3369361/93‑1 (MQ=255)
aaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGtt > 2:757847/1‑93 (MQ=255)
aaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGtt < 1:3232696/93‑1 (MQ=255)
aGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCt > 2:3414122/1‑93 (MQ=255)
gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt < 2:4136999/93‑1 (MQ=255)
gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt > 2:4036043/1‑93 (MQ=255)
gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt < 1:2352559/93‑1 (MQ=255)
aTTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCttt < 2:556107/93‑1 (MQ=255)
aTTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCttt < 2:2938102/93‑1 (MQ=255)
aTTAGTGAGTTAACTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCttt < 1:2677149/93‑1 (MQ=255)
ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt > 1:2460389/1‑93 (MQ=255)
ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt < 1:715705/93‑1 (MQ=255)
ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt < 2:1667808/93‑1 (MQ=255)
gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGTGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTATCCCGTGTTTCTTTtggt < 2:81638/93‑1 (MQ=255)
gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggt < 2:3810221/93‑1 (MQ=255)
tGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtg < 2:1422440/93‑1 (MQ=255)
gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg > 2:2532480/1‑93 (MQ=255)
gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg > 2:2373964/1‑93 (MQ=255)
gTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGt < 1:2778643/93‑1 (MQ=255)
gTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGt > 1:1352922/1‑93 (MQ=255)
aGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAt > 1:3616037/1‑93 (MQ=255)
gTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAtt < 1:4543941/93‑1 (MQ=255)
tAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTc < 2:3233582/93‑1 (MQ=255)
tAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTc > 1:3038764/1‑93 (MQ=255)
tAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTc < 1:570301/93‑1 (MQ=255)
aGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGc > 1:1011816/1‑93 (MQ=255)
gCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCa < 1:3025281/93‑1 (MQ=255)
gCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCa < 1:4290298/93‑1 (MQ=255)
cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAt < 1:3670799/93‑1 (MQ=255)
cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAt < 1:4121615/93‑1 (MQ=255)
cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa < 1:1915161/93‑1 (MQ=255)
cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa < 1:2010085/93‑1 (MQ=255)
ggTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAc < 2:2872572/93‑1 (MQ=255)
ggTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAc > 1:3100958/1‑93 (MQ=255)
gTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACg > 1:4371670/1‑93 (MQ=255)
cacaTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGaa < 1:3314117/93‑1 (MQ=255)
caTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAata < 1:2929866/93‑1 (MQ=255)
ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtt < 1:4687553/93‑1 (MQ=255)
ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtt > 2:3331113/1‑93 (MQ=255)
tGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAttt < 1:3940199/93‑1 (MQ=255)
ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt < 2:4294336/93‑1 (MQ=255)
ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt < 2:3885780/93‑1 (MQ=255)
ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt < 1:1135257/93‑1 (MQ=255)
gACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAttttt < 2:4494478/93‑1 (MQ=255)
aCTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTc > 1:4632484/1‑93 (MQ=255)
cTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCt < 2:3027650/93‑1 (MQ=255)
cTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCt < 2:487542/93‑1 (MQ=255)
cTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGCGGGTTTATTCCGGCATCACGAATATTTTTCt < 2:3755123/93‑1 (MQ=255)
ggCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGc < 1:4048702/93‑1 (MQ=255)
gCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCt > 2:2354612/1‑93 (MQ=255)
ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc > 1:778980/1‑93 (MQ=255)
ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc < 2:3855829/93‑1 (MQ=255)
ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc > 2:2129295/1‑93 (MQ=255)
cGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGc > 2:1053583/1‑93 (MQ=255)
tGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAc > 1:2182307/1‑93 (MQ=255)
tGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAc > 2:2192759/1‑93 (MQ=255)
gTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaa > 1:2462715/1‑93 (MQ=255)
gTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaa > 1:896422/1‑93 (MQ=255)
ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa < 1:655136/93‑1 (MQ=255)
ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa > 1:2557674/1‑93 (MQ=255)
tATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc > 2:3177645/1‑93 (MQ=255)
ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa < 1:2842286/93‑1 (MQ=255)
ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa < 2:4237228/93‑1 (MQ=255)
ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa < 2:3702650/93‑1 (MQ=255)
ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa < 2:696253/93‑1 (MQ=255)
tCGCTGTAGTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAg < 2:4282675/93‑1 (MQ=255)
tgttGTATTCTTCCTGGGTACCCCGTGTTTCTTTTGGTGGCTTTATTCGGGCATCACGAATATTTTTCTGCACCGCTACTGCCCCAAACAAGc < 2:4326030/90‑1 (MQ=255)
cGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGc < 1:1298406/93‑1 (MQ=255)
cGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGc < 2:180417/93‑1 (MQ=255)
cTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCtt > 1:1813034/1‑93 (MQ=255)
cTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCtt < 1:2886934/93‑1 (MQ=255)
cTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCtt > 1:3224137/1‑93 (MQ=255)
tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCTGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa < 1:1569069/93‑1 (MQ=255)
tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa > 2:545332/1‑93 (MQ=255)
tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa > 2:2293827/1‑93 (MQ=255)
tATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaag < 1:631949/93‑1 (MQ=255)
tATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaag > 2:3462903/1‑93 (MQ=255)
aTTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaaga < 1:4608491/93‑1 (MQ=255)
aTTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaaga < 2:723716/93‑1 (MQ=255)
tcttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaagaag > 1:2624831/1‑93 (MQ=255)
tcttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaagaag < 2:264576/93‑1 (MQ=255)
cttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAagaaga < 2:640393/93‑1 (MQ=255)
tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa < 1:4475753/93‑1 (MQ=255)
ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg < 1:1270848/93‑1 (MQ=255)
ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg < 2:1168032/93‑1 (MQ=255)
cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc > 1:3134730/1‑93 (MQ=255)
cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc < 2:474240/93‑1 (MQ=255)
cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc < 1:1875371/93‑1 (MQ=255)
cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGAACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc < 1:3572058/93‑1 (MQ=255)
gggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCa < 2:2405364/93‑1 (MQ=255)
ggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGGACCGCTACTGCACCAAACAAGCTTAAGAAGAAAACCAg > 1:2947352/1‑93 (MQ=255)
ggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAg < 1:1376880/93‑1 (MQ=255)
aaCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTcc < 2:2016035/93‑1 (MQ=255)
aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa < 1:2168057/93‑1 (MQ=255)
aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa < 1:3893694/93‑1 (MQ=255)
aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa < 2:2514485/93‑1 (MQ=255)
|
AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA > NC_000913/3724491‑3724670
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAA > NC_000913/3724490‑3724673
|
CAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGT > SRR4302535.3504829/1‑94 (MQ=60)
AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTG > SRR4302535.257240/1‑94 (MQ=60)
AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTG > SRR4302535.4590679/1‑94 (MQ=60)
AGAAACAGATTAGTGAGTTAAATAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTG < SRR4302535.3205166/94‑1 (MQ=60)
AAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTT > SRR4302535.4598945/1‑94 (MQ=60)
AAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTT < SRR4302535.3392805/94‑1 (MQ=60)
AACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTT < SRR4302535.3255112/94‑1 (MQ=60)
AACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTT > SRR4302535.1898084/1‑94 (MQ=60)
ACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTC < SRR4302535.889315/94‑1 (MQ=60)
ACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTC > SRR4302535.3623100/1‑94 (MQ=60)
CAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCT < SRR4302535.3252649/94‑1 (MQ=60)
CAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCT > SRR4302535.4683839/1‑94 (MQ=60)
CAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCT > SRR4302535.922669/1‑94 (MQ=60)
AGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTT > SRR4302535.3392307/1‑94 (MQ=60)
AGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTT > SRR4302535.631793/1‑94 (MQ=60)
AGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTT < SRR4302535.4304451/94‑1 (MQ=60)
AGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTT > SRR4302535.1978216/1‑94 (MQ=60)
GATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTT < SRR4302535.2369424/94‑1 (MQ=60)
ATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTT > SRR4302535.2478126/1‑94 (MQ=60)
ATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTT < SRR4302535.4429975/94‑1 (MQ=60)
ATTAGTGAGTTAACTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTT < SRR4302535.2696300/94‑1 (MQ=60)
TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG > SRR4302535.3668444/1‑94 (MQ=60)
TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG > SRR4302535.619833/1‑94 (MQ=60)
TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG < SRR4302535.720733/94‑1 (MQ=60)
AGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGT < SRR4302535.2088951/94‑1 (MQ=60)
GTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTG < SRR4302535.2191858/94‑1 (MQ=60)
TGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGG < SRR4302535.481525/94‑1 (MQ=60)
GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG > SRR4302535.3025463/1‑94 (MQ=60)
AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT > SRR4302535.1496556/1‑94 (MQ=60)
AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT > SRR4302535.1362605/1‑94 (MQ=60)
AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT > SRR4302535.2508115/1‑94 (MQ=60)
GTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTT < SRR4302535.2798427/94‑1 (MQ=60)
GTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTT < SRR4302535.2716347/94‑1 (MQ=60)
GTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTT < SRR4302535.3974867/94‑1 (MQ=60)
TTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTT < SRR4302535.1366184/94‑1 (MQ=60)
AAGTAAAAGCCTGGTTACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAT < SRR4302535.3714396/94‑1 (MQ=60)
AAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAT > SRR4302535.3641104/1‑94 (MQ=60)
AAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAT < SRR4302535.4150312/94‑1 (MQ=60)
AGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATT > SRR4302535.2392746/1‑94 (MQ=60)
AGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATT > SRR4302535.124727/1‑94 (MQ=60)
AGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATT < SRR4302535.2818263/94‑1 (MQ=60)
GTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTC > SRR4302535.3060047/1‑94 (MQ=60)
GTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTC < SRR4302535.4575018/94‑1 (MQ=60)
TAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCC > SRR4302535.3197853/1‑94 (MQ=60)
TAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCC < SRR4302535.574307/94‑1 (MQ=60)
AAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCG < SRR4302535.2190407/94‑1 (MQ=60)
AAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCG > SRR4302535.3472747/1‑94 (MQ=60)
AAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCG > SRR4302535.188359/1‑94 (MQ=60)
AAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGC > SRR4302535.1019005/1‑94 (MQ=60)
AGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCA > SRR4302535.3152213/1‑94 (MQ=60)
AGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGGTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCA > SRR4302535.2479682/1‑94 (MQ=60)
GCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAT < SRR4302535.4319639/94‑1 (MQ=60)
GCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAT < SRR4302535.3046460/94‑1 (MQ=60)
CCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATC < SRR4302535.3696220/94‑1 (MQ=60)
CCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATC < SRR4302535.4149819/94‑1 (MQ=60)
CCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATC < SRR4302535.74001/94‑1 (MQ=60)
CGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAC < SRR4302535.1928963/94‑1 (MQ=60)
CGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAC > SRR4302535.3122545/1‑94 (MQ=60)
CGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAC < SRR4302535.2024556/94‑1 (MQ=60)
GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG > SRR4302535.4401584/1‑94 (MQ=60)
CACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAAT < SRR4302535.719578/94‑1 (MQ=60)
CACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAAT < SRR4302535.3337175/94‑1 (MQ=60)
ACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATA > SRR4302535.3119380/1‑94 (MQ=60)
ACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATA > SRR4302535.3326694/1‑94 (MQ=60)
CATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAT < SRR4302535.2950506/94‑1 (MQ=60)
ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT > SRR4302535.3524507/1‑94 (MQ=60)
ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT < SRR4302535.2632439/94‑1 (MQ=60)
TTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTT < SRR4302535.4719392/94‑1 (MQ=60)
TGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTT < SRR4302535.3967097/94‑1 (MQ=60)
GGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTT < SRR4302535.1143355/94‑1 (MQ=60)
GACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTC > SRR4302535.4663915/1‑94 (MQ=60)
CTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTG > SRR4302535.2676917/1‑94 (MQ=60)
CTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTG < SRR4302535.44427/94‑1 (MQ=60)
GACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCA > SRR4302535.4106900/1‑94 (MQ=60)
GCCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAC < SRR4302535.94327/94‑1 (MQ=60)
ACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTGTTCTGCAC > SRR4302535.1673199/1‑94 (MQ=60)
CGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCG > SRR4302535.2891519/1‑94 (MQ=60)
GGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCT < SRR4302535.4076414/94‑1 (MQ=60)
GGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCT < SRR4302535.3782875/94‑1 (MQ=60)
CTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAC > SRR4302535.784451/1‑94 (MQ=60)
CTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAC > SRR4302535.4506740/1‑94 (MQ=60)
TTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACT < SRR4302535.4322479/94‑1 (MQ=60)
ACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGC > SRR4302535.466417/1‑94 (MQ=60)
CGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCA > SRR4302535.2935352/1‑94 (MQ=60)
CGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCA > SRR4302535.3929701/1‑94 (MQ=60)
GTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAC > SRR4302535.2197869/1‑94 (MQ=60)
GTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAC > SRR4302535.3267893/1‑94 (MQ=60)
TGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACC > SRR4302535.1940394/1‑94 (MQ=60)
AGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAA > SRR4302535.902779/1‑94 (MQ=60)
AGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAA > SRR4302535.2480469/1‑94 (MQ=60)
GTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAA > SRR4302535.4058101/1‑94 (MQ=60)
GTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAA > SRR4302535.2576089/1‑94 (MQ=60)
GTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAA > SRR4302535.654283/1‑94 (MQ=60)
TTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAC < SRR4302535.659711/94‑1 (MQ=60)
TTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAG < SRR4302535.2862443/94‑1 (MQ=60)
TTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAG > SRR4302535.2661454/1‑94 (MQ=60)
CGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCT < SRR4302535.765317/94‑1 (MQ=60)
CGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCT < SRR4302535.1307665/94‑1 (MQ=60)
GCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTT > SRR4302535.1826145/1‑94 (MQ=60)
GCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTT > SRR4302535.3246488/1‑94 (MQ=60)
CTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTA > SRR4302535.2799569/1‑94 (MQ=60)
CTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTA < SRR4302535.2907359/94‑1 (MQ=60)
TGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCTGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAA < SRR4302535.1580394/94‑1 (MQ=60)
TGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAA < SRR4302535.3049825/94‑1 (MQ=60)
TGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAA > SRR4302535.3029025/1‑94 (MQ=60)
GTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG > SRR4302535.129839/1‑94 (MQ=60)
GTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG < SRR4302535.2918849/94‑1 (MQ=60)
GTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG < SRR4302535.3632890/94‑1 (MQ=60)
TATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGA < SRR4302535.636355/94‑1 (MQ=60)
ATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAA < SRR4302535.2235655/94‑1 (MQ=60)
ATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAA < SRR4302535.4639810/94‑1 (MQ=60)
TTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAG > SRR4302535.2643644/1‑94 (MQ=60)
TTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA < SRR4302535.3107714/94‑1 (MQ=60)
CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA > SRR4302535.131372/1‑94 (MQ=60)
CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA < SRR4302535.1333768/94‑1 (MQ=60)
TTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAA < SRR4302535.1093801/94‑1 (MQ=60)
TTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAA < SRR4302535.1493230/94‑1 (MQ=60)
TCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAG < SRR4302535.676195/94‑1 (MQ=60)
TCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAG < SRR4302535.4506469/94‑1 (MQ=60)
CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC < SRR4302535.1279927/94‑1 (MQ=60)
CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC < SRR4302535.1198362/94‑1 (MQ=60)
CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC > SRR4302535.3156552/1‑94 (MQ=60)
CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC > SRR4302535.2959032/1‑94 (MQ=60)
CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC > SRR4302535.388150/1‑94 (MQ=60)
CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC > SRR4302535.2429552/1‑94 (MQ=60)
CTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCC < SRR4302535.4711448/94‑1 (MQ=60)
CTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCC < SRR4302535.1888877/94‑1 (MQ=60)
CTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGAACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCC < SRR4302535.3596830/94‑1 (MQ=60)
GGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGGACCGCTACTGCACCAAACAAGCTTAAGAAGAAAACCAG > SRR4302535.2968062/1‑94 (MQ=60)
GGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGT > SRR4302535.1847474/1‑94 (MQ=60)
GGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGT < SRR4302535.1386709/94‑1 (MQ=60)
TAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCC < SRR4302535.3425042/94‑1 (MQ=60)
ACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT > SRR4302535.4530523/1‑94 (MQ=60)
ACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT < SRR4302535.2183593/94‑1 (MQ=60)
ACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT > SRR4302535.2648814/1‑94 (MQ=60)
ACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT < SRR4302535.3920383/94‑1 (MQ=60)
ACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT > SRR4302535.553923/1‑94 (MQ=60)
ACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT > SRR4302535.1580495/1‑94 (MQ=60)
CCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATA < SRR4302535.1753031/94‑1 (MQ=60)
CCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATA > SRR4302535.144505/1‑94 (MQ=60)
CCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCACTCCATA > SRR4302535.92854/1‑94 (MQ=60)
CCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAA > SRR4302535.294461/1‑94 (MQ=60)
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CAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAA > NC_000913/3724490‑3724673
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
