Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,735,415 |
G→A |
R97H (CGC→CAC) |
malS → |
alpha‑amylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,735,415 | 0 | G | A | 99.1%
| 786.0
/ ‑5.8
| 235 | R97H (CGC→CAC) | malS | alpha‑amylase |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (125/106); total (125/110) |
| Fisher's exact test for biased strand distribution p-value = 2.14e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 |
Only 100 of 247 total aligned reads displayed.
ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGAT > NC_000913/3735325‑3735504
|
tCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTc < 1:3201985/93‑1 (MQ=255)
tCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTc > 1:2087034/1‑93 (MQ=255)
aGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCg > 1:628836/1‑93 (MQ=255)
aTGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGt > 1:1091099/1‑93 (MQ=255)
aTGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGt > 2:2971863/1‑93 (MQ=255)
tGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTa < 2:1977000/93‑1 (MQ=255)
tGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTa < 1:302142/93‑1 (MQ=255)
tGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAAAATACGCTGCAAATAGACACCCACTCCGGTa > 2:1016495/1‑93 (MQ=255)
gCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAc > 2:2172437/1‑93 (MQ=255)
gCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAc < 2:1738426/93‑1 (MQ=255)
cTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACg > 2:886598/1‑93 (MQ=255)
cTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACg > 1:445953/1‑93 (MQ=255)
cTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACg < 1:2654235/93‑1 (MQ=255)
ttCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGcc > 1:2309541/1‑93 (MQ=255)
cccTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCaa < 2:401555/93‑1 (MQ=255)
cccTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCaa < 2:2781237/93‑1 (MQ=255)
cccTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCaa < 1:4167158/93‑1 (MQ=255)
ccTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACGCCCACTCCGGTACGCCAAc > 1:155616/1‑93 (MQ=255)
ccTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAAc > 1:2200089/1‑93 (MQ=255)
ccTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAAc < 2:4294438/93‑1 (MQ=255)
cTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACa > 2:1419887/1‑93 (MQ=255)
cTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACa < 1:4564736/93‑1 (MQ=255)
tGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAt < 1:1041181/93‑1 (MQ=255)
cAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATtg > 1:242916/1‑93 (MQ=255)
aaCCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATtga < 2:3441626/93‑1 (MQ=255)
aaCCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATtga < 1:922648/93‑1 (MQ=255)
aCCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATtgat > 1:2962570/1‑93 (MQ=255)
aCCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATtgat > 1:1697977/1‑93 (MQ=255)
ccTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATtgatg < 1:3052942/93‑1 (MQ=255)
ccTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATAGACGCTGCAAATAGACACCCACTCCGGTACGCCAACATtgatg > 1:3288495/1‑93 (MQ=255)
ttGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTgatgat > 2:3331511/1‑93 (MQ=255)
ttGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTgatgat < 1:3801059/93‑1 (MQ=255)
aGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGTTTCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtcc > 1:4686131/1‑93 (MQ=255)
aGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtcc < 1:1352089/93‑1 (MQ=255)
gCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtcca > 1:3639904/1‑93 (MQ=255)
gCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtcca < 1:3406043/93‑1 (MQ=255)
cAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtccat < 2:2912551/93‑1 (MQ=255)
acacGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtccatcc > 2:1387974/1‑93 (MQ=255)
acacGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtccatcc > 1:781851/1‑93 (MQ=255)
cgccgcCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGa > 1:4024592/1‑93 (MQ=255)
gccgccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGaa < 1:412584/93‑1 (MQ=255)
ccgccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAc < 2:654315/93‑1 (MQ=255)
cgccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcg > 1:1388031/1‑93 (MQ=255)
gccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgc > 1:2747099/1‑93 (MQ=255)
ccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgcc > 1:3742051/1‑93 (MQ=255)
ccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgcc < 1:2710488/93‑1 (MQ=255)
ccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgcc > 2:437828/1‑93 (MQ=255)
cTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccg > 1:1965577/1‑93 (MQ=255)
cTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccg > 2:2997743/1‑93 (MQ=255)
cTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccg > 1:4224871/1‑93 (MQ=255)
tCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccgc > 2:2874288/1‑93 (MQ=255)
tCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccgc < 2:538572/93‑1 (MQ=255)
tCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccgc > 2:1235188/1‑93 (MQ=255)
aTGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGa < 1:3091630/93‑1 (MQ=255)
tGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGaa > 1:911974/1‑93 (MQ=255)
tGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGaa > 1:3365086/1‑93 (MQ=255)
ggCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAAc < 2:2053649/93‑1 (MQ=255)
ggCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAAc < 2:3679045/93‑1 (MQ=255)
cGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCg < 1:3368907/93‑1 (MQ=255)
ttGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTa > 1:2636260/1‑93 (MQ=255)
tGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAg > 2:3839236/1‑93 (MQ=255)
gTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGc > 2:568286/1‑93 (MQ=255)
gTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGc > 1:1931564/1‑93 (MQ=255)
ttCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCa > 1:4484562/1‑93 (MQ=255)
aGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGc > 2:3228143/1‑93 (MQ=255)
aGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGc > 1:4378284/1‑93 (MQ=255)
aGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGc < 1:3559106/93‑1 (MQ=255)
gggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGcc < 1:1146007/93‑1 (MQ=255)
gggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGcc < 2:2612814/93‑1 (MQ=255)
gggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGcc < 1:68997/93‑1 (MQ=255)
gggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGcc < 1:1846168/93‑1 (MQ=255)
ggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCt < 2:3508389/93‑1 (MQ=255)
ggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCt > 2:3900631/1‑93 (MQ=255)
gACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTg < 1:1743951/93‑1 (MQ=255)
gACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTg > 2:4623449/1‑93 (MQ=255)
gACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTg < 1:348031/93‑1 (MQ=255)
aCGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTgg < 2:2457198/93‑1 (MQ=255)
cGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGt < 1:4251507/93‑1 (MQ=255)
ggCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGACCGCCGCCGAACCGGTAGCAAGCCTGGTc < 1:863832/93‑1 (MQ=255)
ggCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTc > 1:4643050/1‑93 (MQ=255)
gAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGt > 1:2534766/1‑93 (MQ=255)
atatACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGa > 2:225205/1‑93 (MQ=255)
atatACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTAGTCCGTGa > 2:2340078/1‑93 (MQ=255)
tataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGGACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGaa > 1:3894029/1‑93 (MQ=255)
tataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGaa < 1:708468/93‑1 (MQ=255)
tataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGaa > 2:2663874/1‑93 (MQ=255)
tataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTCCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGaa < 2:3948433/93‑1 (MQ=255)
ataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAt > 2:1657882/1‑93 (MQ=255)
taCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATg < 2:1867348/93‑1 (MQ=255)
gCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGccc > 1:2806084/1‑93 (MQ=255)
gCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGaa < 1:1513265/93‑1 (MQ=255)
cAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGaaa < 1:4619645/93‑1 (MQ=255)
aGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGgga < 2:3578774/93‑1 (MQ=255)
aGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGgga < 1:874992/93‑1 (MQ=255)
aGACACCCACTCCGGTACGCCAACATTAATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGgga < 1:1624251/93‑1 (MQ=255)
gACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggat > 2:3452921/1‑93 (MQ=255)
gACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggat < 1:3704164/93‑1 (MQ=255)
gACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggat > 1:2920960/1‑93 (MQ=255)
cacCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggatgg < 2:1055328/93‑1 (MQ=255)
acCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggatgga > 2:4178003/1‑93 (MQ=255)
|
ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGAT > NC_000913/3735325‑3735504
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTACC > NC_000913/3735323‑3735508
|
CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCAC > SRR4302535.3652575/1‑94 (MQ=60)
AATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACT > SRR4302535.1971490/1‑94 (MQ=60)
ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTC > SRR4302535.2102064/1‑94 (MQ=60)
TCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCC < SRR4302535.3224153/94‑1 (MQ=60)
TCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCC > SRR4302535.2756580/1‑94 (MQ=60)
CAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCG > SRR4302535.633220/1‑94 (MQ=60)
GATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGT > SRR4302535.1098874/1‑94 (MQ=60)
TGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAC > SRR4302535.3231774/1‑94 (MQ=60)
TGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAC < SRR4302535.304246/94‑1 (MQ=60)
GCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACG < SRR4302535.199548/94‑1 (MQ=60)
GCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACG < SRR4302535.8555/94‑1 (MQ=60)
GCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACG > SRR4302535.449072/1‑94 (MQ=60)
CTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTCCGC > SRR4302535.258648/1‑94 (MQ=60)
CTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGC < SRR4302535.2673251/94‑1 (MQ=60)
CTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGC > SRR4302535.2150854/1‑94 (MQ=60)
CTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGC > SRR4302535.876150/1‑94 (MQ=60)
TTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCC > SRR4302535.2326071/1‑94 (MQ=60)
TTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGCACGCCA > SRR4302535.4210785/1‑94 (MQ=60)
TCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAA > SRR4302535.1605946/1‑94 (MQ=60)
CCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACGCCCACTCCGGTACGCCAAC > SRR4302535.156718/1‑94 (MQ=60)
CCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAAC > SRR4302535.2215773/1‑94 (MQ=60)
CCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAAC < SRR4302535.4195692/94‑1 (MQ=60)
CCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAAC > SRR4302535.3418775/1‑94 (MQ=60)
CCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACA < SRR4302535.1766814/94‑1 (MQ=60)
CTGCAACCTTGTAGCACCACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT < SRR4302535.409534/94‑1 (MQ=60)
CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT < SRR4302535.3473689/94‑1 (MQ=60)
CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT < SRR4302535.4595883/94‑1 (MQ=60)
CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT < SRR4302535.3606813/94‑1 (MQ=60)
CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT > SRR4302535.1937119/1‑94 (MQ=60)
CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCCGCCAATAGACACCCACTCCGGTACGCCAACAT > SRR4302535.3750258/1‑94 (MQ=60)
TGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATT < SRR4302535.1048565/94‑1 (MQ=60)
GCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTG > SRR4302535.244578/1‑94 (MQ=60)
CAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGA > SRR4302535.1132900/1‑94 (MQ=60)
CAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGA < SRR4302535.1607366/94‑1 (MQ=60)
AACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGAT < SRR4302535.929187/94‑1 (MQ=60)
AACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGAT > SRR4302535.2983366/1‑94 (MQ=60)
AACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGAT > SRR4302535.1710248/1‑94 (MQ=60)
AACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGAT > SRR4302535.4642781/1‑94 (MQ=60)
ACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATG < SRR4302535.358933/94‑1 (MQ=60)
ACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATG < SRR4302535.962511/94‑1 (MQ=60)
ACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATG < SRR4302535.850638/94‑1 (MQ=60)
ACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATAGACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATG > SRR4302535.3311358/1‑94 (MQ=60)
CCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGT > SRR4302535.109836/1‑94 (MQ=60)
CCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGA < SRR4302535.1744382/94‑1 (MQ=60)
CCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGA < SRR4302535.3074320/94‑1 (MQ=60)
CTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGAT > SRR4302535.2979919/1‑94 (MQ=60)
CTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGAT > SRR4302535.2710913/1‑94 (MQ=60)
TTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATT < SRR4302535.3827260/94‑1 (MQ=60)
GTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTC < SRR4302535.14190/94‑1 (MQ=60)
TAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGTTTCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCC > SRR4302535.4717887/1‑94 (MQ=60)
TAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCC > SRR4302535.1536965/1‑94 (MQ=60)
AGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCA > SRR4302535.3720019/1‑94 (MQ=60)
AGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCA < SRR4302535.1361766/94‑1 (MQ=60)
AGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCA > SRR4302535.3665119/1‑94 (MQ=60)
AGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACA‑CCACTCCGGTACCCCAACATTGATGATTTCCAT > SRR4302535.3065982/1‑94 (MQ=60)
GCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCAT < SRR4302535.695202/94‑1 (MQ=60)
GCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCAT < SRR4302535.2822890/94‑1 (MQ=60)
GCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCAT < SRR4302535.3429750/94‑1 (MQ=60)
CAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATC > SRR4302535.3014266/1‑94 (MQ=60)
CAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATC < SRR4302535.4268871/94‑1 (MQ=60)
AACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCC < SRR4302535.449766/94‑1 (MQ=60)
AACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCC > SRR4302535.787339/1‑94 (MQ=60)
ACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGA > SRR4302535.1755545/1‑94 (MQ=60)
ACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGA > SRR4302535.4052128/1‑94 (MQ=60)
CGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAA > SRR4302535.2253938/1‑94 (MQ=60)
GCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAC < SRR4302535.3376073/94‑1 (MQ=60)
GCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAC < SRR4302535.415482/94‑1 (MQ=60)
GCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAC > SRR4302535.2982219/1‑94 (MQ=60)
CCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACG > SRR4302535.1397938/1‑94 (MQ=60)
CCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACG < SRR4302535.1505382/94‑1 (MQ=60)
CCGCCTCAAAGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACG < SRR4302535.4667384/94‑1 (MQ=60)
CGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCCACATTGATGATTTCCATCCAGAACGC > SRR4302535.3391325/1‑94 (MQ=60)
CGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGC > SRR4302535.3394931/1‑94 (MQ=60)
CGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGC > SRR4302535.2766680/1‑94 (MQ=60)
CGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGC < SRR4302535.561876/94‑1 (MQ=60)
GCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCC > SRR4302535.3767943/1‑94 (MQ=60)
GCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCC > SRR4302535.3071898/1‑94 (MQ=60)
CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG < SRR4302535.2729862/94‑1 (MQ=60)
CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG > SRR4302535.1979742/1‑94 (MQ=60)
CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG > SRR4302535.4645206/1‑94 (MQ=60)
CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG > SRR4302535.4253779/1‑94 (MQ=60)
CAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCG < SRR4302535.2592759/94‑1 (MQ=60)
ATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAA > SRR4302535.918458/1‑94 (MQ=60)
ATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAA > SRR4302535.904561/1‑94 (MQ=60)
ATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAA > SRR4302535.3388502/1‑94 (MQ=60)
ATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAA > SRR4302535.2899384/1‑94 (MQ=60)
ATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAA < SRR4302535.3113160/94‑1 (MQ=60)
ATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAA > SRR4302535.3132010/1‑94 (MQ=60)
CGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGG > SRR4302535.1702252/1‑94 (MQ=60)
CGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGG < SRR4302535.3392348/94‑1 (MQ=60)
ATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTA < SRR4302535.704705/94‑1 (MQ=60)
ATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTA > SRR4302535.2655147/1‑94 (MQ=60)
TTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAG < SRR4302535.3099846/94‑1 (MQ=60)
TTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAG < SRR4302535.1394236/94‑1 (MQ=60)
TGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGC > SRR4302535.1945483/1‑94 (MQ=60)
GTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCA > SRR4302535.4515349/1‑94 (MQ=60)
TTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAA < SRR4302535.4160814/94‑1 (MQ=60)
TCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAG < SRR4302535.753592/94‑1 (MQ=60)
CAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGC > SRR4302535.4408242/1‑94 (MQ=60)
CAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGC > SRR4302535.3857789/1‑94 (MQ=60)
CAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGC > SRR4302535.4298981/1‑94 (MQ=60)
AGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCC > SRR4302535.4302461/1‑94 (MQ=60)
AGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCC < SRR4302535.3583789/94‑1 (MQ=60)
GGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCT < SRR4302535.69504/94‑1 (MQ=60)
GGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCT > SRR4302535.2710572/1‑94 (MQ=60)
GGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCT < SRR4302535.1859473/94‑1 (MQ=60)
GGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCT < SRR4302535.1154174/94‑1 (MQ=60)
GGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTG < SRR4302535.634408/94‑1 (MQ=60)
GACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGG < SRR4302535.4436669/94‑1 (MQ=60)
GACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGG < SRR4302535.1756570/94‑1 (MQ=60)
GACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGG > SRR4302535.4218154/1‑94 (MQ=60)
GACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGG < SRR4302535.350428/94‑1 (MQ=60)
CGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTC < SRR4302535.3386236/94‑1 (MQ=60)
CGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTC < SRR4302535.4280635/94‑1 (MQ=60)
CGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTC > SRR4302535.4674520/1‑94 (MQ=60)
GGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGACCGCCGCCGAACCGGTAGCAAGCCTGGTCC < SRR4302535.869936/94‑1 (MQ=60)
GGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCC < SRR4302535.616324/94‑1 (MQ=60)
GCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCG < SRR4302535.3961684/94‑1 (MQ=60)
CGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGT < SRR4302535.1303729/94‑1 (MQ=60)
CGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGT > SRR4302535.319933/1‑94 (MQ=60)
CGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGT > SRR4302535.2553024/1‑94 (MQ=60)
AATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGA < SRR4302535.1162305/94‑1 (MQ=60)
AATATACGCTGCAAATAGACACCCACTCCGGTACCCCAACATTGATGATTTCCACCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGA < SRR4302535.4431024/94‑1 (MQ=60)
ATATCCGCTGCAAATAGACACCCCCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAA < SRR4302535.906645/94‑1 (MQ=60)
ATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGGACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAA > SRR4302535.3920720/1‑94 (MQ=60)
ATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAA > SRR4302535.3529434/1‑94 (MQ=60)
ATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAA > SRR4302535.1992472/1‑94 (MQ=60)
TATACGCTGCAAATAGACACCTACTCCGGTACGCCAACATGGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAT < SRR4302535.2844453/94‑1 (MQ=60)
TATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAT < SRR4302535.713441/94‑1 (MQ=60)
TATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAT < SRR4302535.4508395/94‑1 (MQ=60)
TATACGCTGCAAATAGACACACACTCCGGTACGCCAACATTGATGATTTACATCCAGAACGACGCCGAACCGGTAGCAAGCCTGGTCCGTGAAT > SRR4302535.1928296/1‑94 (MQ=60)
ATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATG > SRR4302535.3743761/1‑94 (MQ=60)
CGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCC > SRR4302535.2826032/1‑94 (MQ=60)
CTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGA > SRR4302535.3839157/1‑94 (MQ=60)
GCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAA < SRR4302535.1524168/94‑1 (MQ=60)
CAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAAT < SRR4302535.4651034/94‑1 (MQ=60)
AATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCAGGTCCGTGAATGCCCGAAATGG > SRR4302535.4577263/1‑94 (MQ=60)
ATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGG > SRR4302535.995955/1‑94 (MQ=60)
TAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGA > SRR4302535.4675818/1‑94 (MQ=60)
TAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGA < SRR4302535.2793073/94‑1 (MQ=60)
AGACACCCTCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGAT < SRR4302535.2219206/94‑1 (MQ=60)
AGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGAT > SRR4302535.265553/1‑94 (MQ=60)
AGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGAT > SRR4302535.2941567/1‑94 (MQ=60)
AGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGAT < SRR4302535.881193/94‑1 (MQ=60)
AGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGAT > SRR4302535.3769840/1‑94 (MQ=60)
AGACACCCACTCCGGTACGCCAACATTAATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGAT < SRR4302535.1635977/94‑1 (MQ=60)
GACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATG < SRR4302535.3729816/94‑1 (MQ=60)
ACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGG < SRR4302535.923014/94‑1 (MQ=60)
CACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAACTGGGATGGA > SRR4302535.2387300/1‑94 (MQ=60)
AACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGA > SRR4302535.4088556/1‑94 (MQ=60)
CCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATT > SRR4302535.3356257/1‑94 (MQ=60)
CCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATT > SRR4302535.3197704/1‑94 (MQ=60)
CCACTCCGTTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTA < SRR4302535.3139744/94‑1 (MQ=60)
CCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTA < SRR4302535.4036000/94‑1 (MQ=60)
ACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTACC > SRR4302535.1108363/1‑94 (MQ=60)
ACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTACC > SRR4302535.687178/1‑94 (MQ=60)
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CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTACC > NC_000913/3735323‑3735508
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
