Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,735,415	G→A	R97H (CGC→CAC)	malS →	alpha‑amylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,735,415	0	G	A	98.4%	1250.1 / NA	384	R97H (CGC→CAC)	malS	alpha‑amylase
Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (193/184); minor base C (1/5); total (194/190)
Fisher's exact test for biased strand distribution p-value = 1.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 396 total aligned reads displayed.

ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGAT  >  NC_000913/3735325‑3735504

aTCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACt                                                                                         <  1:7452331/93‑1 (MQ=255)

 tCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTc                                                                                        >  1:5614544/1‑93 (MQ=255)

 tCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTc                                                                                        >  1:3063903/1‑93 (MQ=255)

  cAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTcc                                                                                       >  2:758550/1‑93 (MQ=255)

    gATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCgg                                                                                     >  1:4542722/1‑93 (MQ=255)

      tGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTa                                                                                   <  1:6534706/93‑1 (MQ=255)

       gCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAc                                                                                  >  1:5307520/1‑93 (MQ=255)

        cTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACg                                                                                 >  2:4432557/1‑93 (MQ=255)

         tttCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGc                                                                                <  2:6321229/93‑1 (MQ=255)

              cTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACa                                                                           >  1:1583475/1‑93 (MQ=255)

              cTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACa                                                                           <  1:3766234/93‑1 (MQ=255)

               tGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAt                                                                          <  2:4941220/93‑1 (MQ=255)

               tGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAt                                                                          >  2:4707018/1‑93 (MQ=255)

               tGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAt                                                                          >  2:6729256/1‑93 (MQ=255)

                gCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAtt                                                                         <  1:164579/93‑1 (MQ=255)

                gCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAtt                                                                         <  1:5434225/93‑1 (MQ=255)

                  aaCCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATtga                                                                       <  2:1554065/93‑1 (MQ=255)

                      ttGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTgatgat                                                                   >  2:5049609/1‑93 (MQ=255)

                       tGTAGCAACGCGCCACCGCAATGGCGAGTGTTCAGGGACGGCGAATATACGCGGCAAATAGACCCCCACTCCGGTACGCCAACATTGATGAtt                                                                  <  2:115123/93‑1 (MQ=255)

                        gTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGAttt                                                                 >  2:3128511/1‑93 (MQ=255)

                          aGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGCTTtcc                                                               >  1:2540765/1‑93 (MQ=255)

                          aGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtcc                                                               <  1:648051/93‑1 (MQ=255)

                           gCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtcca                                                              >  1:6856880/1‑93 (MQ=255)

                             aaCACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtccatc                                                            >  2:5478073/1‑93 (MQ=255)

                             aaCACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtccatc                                                            <  2:7233924/93‑1 (MQ=255)

                               cacGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTtccatcca                                                          >  2:3781959/1‑93 (MQ=255)

                                acGCCGCCTCAAAGGCGATTGTTCAGGGACGGCGAATATACGCTGCACATAGACACCCACTCCGGTACGCCAACATAGATGATTTCCATCCAg                                                         <  2:7021248/93‑1 (MQ=255)

                                  gccgccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGaa                                                       <  2:1410966/93‑1 (MQ=255)

                                  gccgccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGaa                                                       <  1:1935207/93‑1 (MQ=255)

                                   ccgccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAc                                                      <  2:5246452/93‑1 (MQ=255)

                                     gccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgc                                                    <  1:6241689/93‑1 (MQ=255)

                                      ccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgcc                                                   <  1:2027293/93‑1 (MQ=255)

                                      ccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgcc                                                   <  1:4465562/93‑1 (MQ=255)

                                      ccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgcc                                                   <  2:5609729/93‑1 (MQ=255)

                                      ccTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgcc                                                   <  1:4037350/93‑1 (MQ=255)

                                       cTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccg                                                  >  1:1104095/1‑93 (MQ=255)

                                       cTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccg                                                  <  2:3042497/93‑1 (MQ=255)

                                        tCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccgc                                                 <  1:3832542/93‑1 (MQ=255)

                                        tCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAcgccgc                                                 <  1:4926045/93‑1 (MQ=255)

                                         cAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACgccgcc                                                <  1:5143066/93‑1 (MQ=255)

                                          aaTGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGccgccg                                               >  1:1417481/1‑93 (MQ=255)

                                            tGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTGCATCCAGAACGCCGCCGaa                                             >  1:7693407/1‑93 (MQ=255)

                                            tGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGaa                                             >  1:4797493/1‑93 (MQ=255)

                                             ggCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCTGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAAc                                            <  1:1816149/93‑1 (MQ=255)

                                             ggCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAAc                                            <  2:909801/93‑1 (MQ=255)

                                              gCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAAcc                                           <  1:5823212/93‑1 (MQ=255)

                                              gCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAAcc                                           <  2:5944651/93‑1 (MQ=255)

                                               cGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCg                                          <  2:4083956/93‑1 (MQ=255)

                                                gATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCGACGTTGATGATTTCCATCCAGAACGCCGCAGAAACgg                                         >  1:266376/1‑93 (MQ=255)

                                                 aTTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGt                                        <  2:1986444/93‑1 (MQ=255)

                                                  ttGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTa                                       <  1:5753276/93‑1 (MQ=255)

                                                   tGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAg                                      >  1:590058/1‑93 (MQ=255)

                                                     ttCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCa                                    >  1:887910/1‑93 (MQ=255)

                                                      tCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCaa                                   >  1:6958904/1‑93 (MQ=255)

                                                      tCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCaa                                   <  1:2116915/93‑1 (MQ=255)

                                                         gggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGcc                                <  1:7203615/93‑1 (MQ=255)

                                                         gggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGcc                                >  2:3989815/1‑93 (MQ=255)

                                                         gggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGcc                                >  2:3267171/1‑93 (MQ=255)

                                                          ggACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCt                               <  2:769777/93‑1 (MQ=255)

                                                           gACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTg                              <  2:2803868/93‑1 (MQ=255)

                                                           gACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTg                              <  1:1735282/93‑1 (MQ=255)

                                                            aCGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTgg                             <  1:4328572/93‑1 (MQ=255)

                                                             cGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGt                            >  2:2197371/1‑93 (MQ=255)

                                                               gCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTcc                          >  1:3563468/1‑93 (MQ=255)

                                                               gCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTcc                          >  2:3443482/1‑93 (MQ=255)

                                                                 gAATATACGCTGCAAATAGACGCACATTCCGGTGCGTCAACATTAATGATTCCCATCCAGAGCGCCGCCGAACGGGTAGCAAGCCTGGTCCGt                        <  2:2438994/93‑1 (MQ=255)

                                                                 gAATATACGCTGCAAATAGACACCCACTCCGGTACGCCGACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGt                        >  2:802779/1‑93 (MQ=255)

                                                                 gAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGt                        >  1:2866798/1‑93 (MQ=255)

                                                                 gAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGt                        <  2:2332134/93‑1 (MQ=255)

                                                                  aaTATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTg                       >  2:7873627/1‑93 (MQ=255)

                                                                  aaTATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTg                       >  1:1535263/1‑93 (MQ=255)

                                                                   atatACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGa                      >  2:3578067/1‑93 (MQ=255)

                                                                   atatACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGCCCGTGa                      <  1:67189/93‑1 (MQ=255)

                                                                    tatcCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCCCCGAACCGGTAGCAAGCCTGGTCCGTGaa                     <  1:2207167/93‑1 (MQ=255)

                                                                    tataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGaa                     >  1:6050962/1‑93 (MQ=255)

                                                                    tataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGaa                     >  1:4234909/1‑93 (MQ=255)

                                                                    tataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGaa                     >  2:2913194/1‑93 (MQ=255)

                                                                    tataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAG‑CTGGGCCGGGAAt                    >  1:1251856/1‑93 (MQ=255)

                                                                     ataCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAt                    >  1:3336332/1‑93 (MQ=255)

                                                                      taCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATg                   <  2:43460/93‑1 (MQ=255)

                                                                      taCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATg                   <  2:6646731/93‑1 (MQ=255)

                                                                      taCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATg                   >  1:6126103/1‑93 (MQ=255)

                                                                       aCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGc                  <  1:7285414/93‑1 (MQ=255)

                                                                        cGCTTCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGcc                 <  2:5657225/93‑1 (MQ=255)

                                                                         gCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGccc                >  1:3476734/1‑93 (MQ=255)

                                                                         gCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGccc                >  1:100919/1‑93 (MQ=255)

                                                                          cTGCAAATAGACACCCACCCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGCACCGGTAGCAAGCCTGGCCCGTGAATGCCCg               <  2:717496/93‑1 (MQ=255)

                                                                           tGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGCAGCAAGCCTGGTCCGTGAATGCCCGa              >  2:7398331/1‑93 (MQ=255)

                                                                            gCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGaa             >  2:1935038/1‑93 (MQ=255)

                                                                             cAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGaaa            <  2:4577213/93‑1 (MQ=255)

                                                                                aTAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATgg         <  1:5473425/93‑1 (MQ=255)

                                                                                  aGACGCCCTCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGgga       <  2:1717199/93‑1 (MQ=255)

                                                                                  aGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGgga       <  2:5680815/93‑1 (MQ=255)

                                                                                  aGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGgga       <  1:2437970/93‑1 (MQ=255)

                                                                                   gACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggat      <  2:5832169/93‑1 (MQ=255)

                                                                                     cacCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggatgg    <  2:1025993/93‑1 (MQ=255)

                                                                                      ccccACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggatgga   <  2:6912502/92‑1 (MQ=255)

                                                                                      ccccACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggatgga   <  1:2598365/92‑1 (MQ=255)

                                                                                      acCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggatggt   >  1:5672151/1‑92 (MQ=255)

                                                                                      acCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGggatgga   >  2:6421486/1‑93 (MQ=255)

ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGAT  >  NC_000913/3735325‑3735504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 226 total aligned reads displayed.

CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTACC  >  NC_000913/3735323‑3735508

caagtcactgcctttcgTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGGCGGCGAATATACGCTGCAAATAGACACCCAC                                                                                              <  SRR4302543.1057922/77‑1 (MQ=60)

CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCAC                                                                                              <  SRR4302543.4480705/94‑1 (MQ=60)

CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCAC                                                                                              <  SRR4302543.1057921/94‑1 (MQ=60)

CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCAC                                                                                              >  SRR4302543.1733607/1‑94 (MQ=60)

CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCAC                                                                                              <  SRR4302543.2591344/94‑1 (MQ=60)

CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCAC                                                                                              >  SRR4302543.1838626/1‑94 (MQ=60)

CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCAC                                                                                              >  SRR4302543.3940921/1‑94 (MQ=60)

 AATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACTGCGAATATACACTGCAAATACACACCCACT                                                                                             >  SRR4302543.1711827/1‑94 (MQ=60)

 AATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACT                                                                                             <  SRR4302543.2455443/94‑1 (MQ=60)

  ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTC                                                                                            >  SRR4302543.2438888/1‑94 (MQ=60)

  ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTC                                                                                            <  SRR4302543.7523741/94‑1 (MQ=60)

  ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTC                                                                                            <  SRR4302543.4919633/94‑1 (MQ=60)

  ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTC                                                                                            >  SRR4302543.6677975/1‑94 (MQ=60)

  ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTC                                                                                            >  SRR4302543.1293572/1‑94 (MQ=60)

  ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTC                                                                                            >  SRR4302543.3648521/1‑94 (MQ=60)

  ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTC                                                                                            >  SRR4302543.5665706/1‑94 (MQ=60)

  ATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTC                                                                                            >  SRR4302543.3091463/1‑94 (MQ=60)

   TCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCC                                                                                           <  SRR4302543.2475419/94‑1 (MQ=60)

    CAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCG                                                                                          >  SRR4302543.1787926/1‑94 (MQ=60)

    CAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCG                                                                                          >  SRR4302543.5517015/1‑94 (MQ=60)

    CAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCG                                                                                          >  SRR4302543.5862453/1‑94 (MQ=60)

     AGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGG                                                                                         <  SRR4302543.3890540/94‑1 (MQ=60)

     AGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGG                                                                                         >  SRR4302543.4584087/1‑94 (MQ=60)

      GATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGT                                                                                        >  SRR4302543.6294631/1‑94 (MQ=60)

       ATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCTAATAGACACCCACTCCGGTA                                                                                       >  SRR4302543.2149721/1‑94 (MQ=60)

       ATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTA                                                                                       >  SRR4302543.3404221/1‑94 (MQ=60)

        TGCTTTCCCTGCAACCTTGTANCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAC                                                                                      <  SRR4302543.371458/94‑1 (MQ=60)

        TGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAC                                                                                      <  SRR4302543.6596222/94‑1 (MQ=60)

        TGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAC                                                                                      <  SRR4302543.6277788/94‑1 (MQ=60)

        TGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAC                                                                                      >  SRR4302543.5355455/1‑94 (MQ=60)

        TGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTAC                                                                                      <  SRR4302543.5199438/94‑1 (MQ=60)

            TTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCA                                                                                  >  SRR4302543.7321502/1‑94 (MQ=60)

               CCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACT                                                                               >  SRR4302543.4465286/1‑94 (MQ=60)

               CCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACA                                                                               >  SRR4302543.4909787/1‑94 (MQ=60)

               CCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACA                                                                               >  SRR4302543.5109896/1‑94 (MQ=60)

               CCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACA                                                                               >  SRR4302543.1597610/1‑94 (MQ=60)

               CCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACA                                                                               >  SRR4302543.4773261/1‑94 (MQ=60)

               CCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACA                                                                               >  SRR4302543.1624027/1‑94 (MQ=60)

                CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACCCCCACTCCGGTACGCCAACAT                                                                              >  SRR4302543.698215/1‑94 (MQ=60)

                CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT                                                                              <  SRR4302543.7150961/94‑1 (MQ=60)

                CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT                                                                              <  SRR4302543.7150960/94‑1 (MQ=60)

                CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT                                                                              <  SRR4302543.2174184/94‑1 (MQ=60)

                CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT                                                                              <  SRR4302543.3799387/94‑1 (MQ=60)

                CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT                                                                              >  SRR4302543.1035082/1‑94 (MQ=60)

                CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT                                                                              >  SRR4302543.3675330/1‑94 (MQ=60)

                CTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACAT                                                                              <  SRR4302543.6584533/94‑1 (MQ=60)

                 TGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATT                                                                             >  SRR4302543.203231/1‑94 (MQ=60)

                 TGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATT                                                                             >  SRR4302543.111959/1‑94 (MQ=60)

                  GCACCCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTG                                                                            <  SRR4302543.3078912/94‑1 (MQ=60)

                  GCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTG                                                                            <  SRR4302543.165996/94‑1 (MQ=60)

                  GCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTG                                                                            <  SRR4302543.5483588/94‑1 (MQ=60)

                   CAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGA                                                                           <  SRR4302543.7829603/94‑1 (MQ=60)

                    AACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGAT                                                                          <  SRR4302543.612268/94‑1 (MQ=60)

                    AACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGAT                                                                          <  SRR4302543.1399637/94‑1 (MQ=60)

                       CTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCACCATTGATGAT                                                                       >  SRR4302543.5003002/1‑94 (MQ=60)

                       CTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGAT                                                                       <  SRR4302543.3579359/94‑1 (MQ=60)

                       CTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGAT                                                                       >  SRR4302543.7649293/1‑94 (MQ=60)

                       CTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGAT                                                                       >  SRR4302543.3828048/1‑94 (MQ=60)

                       CTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGAT                                                                       >  SRR4302543.5734510/1‑94 (MQ=60)

                        TTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATTATT                                                                      >  SRR4302543.5858966/1‑94 (MQ=60)

                         TGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTT                                                                     >  SRR4302543.6828593/1‑94 (MQ=60)

                         TGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTT                                                                     >  SRR4302543.6875675/1‑94 (MQ=60)

                         TGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTT                                                                     >  SRR4302543.570290/1‑94 (MQ=60)

                         TGTAGCAACACGCCGACTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTT                                                                     <  SRR4302543.5910701/94‑1 (MQ=60)

                          GTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTC                                                                    <  SRR4302543.6291405/94‑1 (MQ=60)

                           TAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCC                                                                   <  SRR4302543.1952152/94‑1 (MQ=60)

                           TAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCC                                                                   <  SRR4302543.5615225/94‑1 (MQ=60)

                            AGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCA                                                                  >  SRR4302543.6921527/1‑94 (MQ=60)

                            AGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCA                                                                  <  SRR4302543.653977/94‑1 (MQ=60)

                            AGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCA                                                                  >  SRR4302543.5713124/1‑94 (MQ=60)

                             GCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCAT                                                                 <  SRR4302543.5213054/94‑1 (MQ=60)

                              CAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATC                                                                <  SRR4302543.3537200/94‑1 (MQ=60)

                               AACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCC                                                               <  SRR4302543.2066174/94‑1 (MQ=60)

                                 CACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAG                                                             <  SRR4302543.902612/94‑1 (MQ=60)

                                 CACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAG                                                             <  SRR4302543.7495192/94‑1 (MQ=60)

                                 CACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAG                                                             <  SRR4302543.7495191/94‑1 (MQ=60)

                                    GCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAC                                                          <  SRR4302543.1952605/94‑1 (MQ=60)

                                    GCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAC                                                          <  SRR4302543.4345040/94‑1 (MQ=60)

                                    GCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAC                                                          <  SRR4302543.7418060/94‑1 (MQ=60)

                                    GCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAC                                                          <  SRR4302543.7016492/94‑1 (MQ=60)

                                    GCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAAC                                                          <  SRR4302543.1240429/94‑1 (MQ=60)

                                     CCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACG                                                         <  SRR4302543.3036492/94‑1 (MQ=60)

                                      CGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTGCATCCACAACGC                                                        >  SRR4302543.4021164/1‑94 (MQ=60)

                                      CGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGC                                                        >  SRR4302543.1571611/1‑94 (MQ=60)

                                      CGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGC                                                        >  SRR4302543.188466/1‑94 (MQ=60)

                                       GCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCCTCCAGAACGCC                                                       >  SRR4302543.4227264/1‑94 (MQ=60)

                                       GCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCC                                                       >  SRR4302543.1802638/1‑94 (MQ=60)

                                       GCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCC                                                       <  SRR4302543.6300579/94‑1 (MQ=60)

                                       GCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCC                                                       >  SRR4302543.4227266/1‑94 (MQ=60)

                                       GCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCC                                                       <  SRR4302543.6134942/94‑1 (MQ=60)

                                        CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG                                                      <  SRR4302543.3861876/94‑1 (MQ=60)

                                        CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG                                                      >  SRR4302543.1114049/1‑94 (MQ=60)

                                        CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG                                                      <  SRR4302543.4506040/94‑1 (MQ=60)

                                        CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG                                                      <  SRR4302543.4073477/94‑1 (MQ=60)

                                        CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG                                                      <  SRR4302543.4506039/94‑1 (MQ=60)

                                        CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG                                                      >  SRR4302543.5480833/1‑94 (MQ=60)

                                        CCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACGCGGGTACGCCAACATTGATGATTTCCATCCAGAACGCCG                                                      >  SRR4302543.3740000/1‑94 (MQ=60)

                                         CTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGC                                                     >  SRR4302543.1717480/1‑94 (MQ=60)

                                         CTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGC                                                     >  SRR4302543.1527455/1‑94 (MQ=60)

                                         CTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGC                                                     >  SRR4302543.3450712/1‑94 (MQ=60)

                                         CTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGC                                                     >  SRR4302543.718650/1‑94 (MQ=60)

                                         CTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGC                                                     >  SRR4302543.2019354/1‑94 (MQ=60)

                                         CTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGC                                                     >  SRR4302543.6027725/1‑94 (MQ=60)

                                          TCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCC                                                    <  SRR4302543.4970918/94‑1 (MQ=60)

                                          TCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCC                                                    <  SRR4302543.3866351/94‑1 (MQ=60)

                                          TCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCC                                                    <  SRR4302543.2646972/94‑1 (MQ=60)

                                           CAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCG                                                   >  SRR4302543.1430312/1‑94 (MQ=60)

                                           CAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCG                                                   >  SRR4302543.5505604/1‑94 (MQ=60)

                                           CAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCG                                                   <  SRR4302543.5189566/94‑1 (MQ=60)

                                           CAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCG                                                   <  SRR4302543.5705196/94‑1 (MQ=60)

                                           CAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCG                                                   >  SRR4302543.1580976/1‑94 (MQ=60)

                                             ATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAA                                                 >  SRR4302543.4841340/1‑94 (MQ=60)

                                              TGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCCCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAAC                                                <  SRR4302543.4787881/94‑1 (MQ=60)

                                               GGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCCCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACC                                               <  SRR4302543.1832441/94‑1 (MQ=60)

                                                GCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCG                                              <  SRR4302543.5876168/94‑1 (MQ=60)

                                                 CGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGG                                             >  SRR4302543.2225846/1‑94 (MQ=60)

                                                 CGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGG                                             <  SRR4302543.6555859/94‑1 (MQ=60)

                                                   ATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTA                                           <  SRR4302543.7839658/94‑1 (MQ=60)

                                                   ATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTA                                           >  SRR4302543.2332175/1‑94 (MQ=60)

                                                    TTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAG                                          >  SRR4302543.595479/1‑94 (MQ=60)

                                                    TTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAG                                          <  SRR4302543.5805708/94‑1 (MQ=60)

                                                      GTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCA                                        >  SRR4302543.895774/1‑94 (MQ=60)

                                                       TTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAA                                       >  SRR4302543.7024379/1‑94 (MQ=60)

                                                       TTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAA                                       <  SRR4302543.101948/94‑1 (MQ=60)

                                                       TTCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAA                                       <  SRR4302543.342227/94‑1 (MQ=60)

                                                        TCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAG                                      <  SRR4302543.2135865/94‑1 (MQ=60)

                                                        TCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAG                                      <  SRR4302543.137764/94‑1 (MQ=60)

                                                        TCAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAG                                      <  SRR4302543.4391816/94‑1 (MQ=60)

                                                         CAGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGC                                     >  SRR4302543.755346/1‑94 (MQ=60)

                                                          AGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCC                                    >  SRR4302543.2516796/1‑94 (MQ=60)

                                                          AGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCC                                    >  SRR4302543.679802/1‑94 (MQ=60)

                                                          AGGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCC                                    >  SRR4302543.4515051/1‑94 (MQ=60)

                                                           GGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCT                                   <  SRR4302543.2609650/94‑1 (MQ=60)

                                                           GGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCT                                   <  SRR4302543.7273457/94‑1 (MQ=60)

                                                           GGGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCT                                   >  SRR4302543.5559021/1‑94 (MQ=60)

                                                            GGACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTG                                  <  SRR4302543.1516758/94‑1 (MQ=60)

                                                             GACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGG                                 <  SRR4302543.4843884/94‑1 (MQ=60)

                                                             GACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGG                                 <  SRR4302543.1750751/94‑1 (MQ=60)

                                                              ACGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGT                                <  SRR4302543.4367855/94‑1 (MQ=60)

                                                               CGGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTC                               >  SRR4302543.5518564/1‑94 (MQ=60)

                                                                GGCGAATATACGCTGCAAATAGACCCCCACTCCCGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCC                              <  SRR4302543.1572965/94‑1 (MQ=60)

                                                                GGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCC                              >  SRR4302543.3595008/1‑94 (MQ=60)

                                                                GGCGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCC                              >  SRR4302543.5978900/1‑94 (MQ=60)

                                                                  CGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGT                            >  SRR4302543.4001733/1‑94 (MQ=60)

                                                                  CGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGT                            >  SRR4302543.451464/1‑94 (MQ=60)

                                                                  CGAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGT                            >  SRR4302543.2892922/1‑94 (MQ=60)

                                                                   GAATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTG                           >  SRR4302543.2099142/1‑94 (MQ=60)

                                                                    AATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGA                          >  SRR4302543.1641232/1‑94 (MQ=60)

                                                                    AATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGA                          >  SRR4302543.2794583/1‑94 (MQ=60)

                                                                    AATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGACTGGTCCGTGA                          >  SRR4302543.5920608/1‑94 (MQ=60)

                                                                     ATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCtgggccgggaat                         >  SRR4302543.1263080/1‑82 (MQ=60)

                                                                     ATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAA                         >  SRR4302543.4273328/1‑94 (MQ=60)

                                                                     ATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAA                         >  SRR4302543.6108237/1‑94 (MQ=60)

                                                                     ATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAA                         >  SRR4302543.5071392/1‑94 (MQ=60)

                                                                     ATATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGCCCGTGAA                         <  SRR4302543.67789/94‑1 (MQ=60)

                                                                      TATCCGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCCCCGAACCGGTAGCAAGCCTGGTCCGTGAAT                        <  SRR4302543.2227047/94‑1 (MQ=60)

                                                                      TATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAT                        <  SRR4302543.6572491/94‑1 (MQ=60)

                                                                      TATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAT                        <  SRR4302543.3207405/94‑1 (MQ=60)

                                                                      TATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAT                        <  SRR4302543.3285237/94‑1 (MQ=60)

                                                                      TATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAT                        >  SRR4302543.3366394/1‑94 (MQ=60)

                                                                      TATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAAT                        >  SRR4302543.5851670/1‑94 (MQ=60)

                                                                       ATACGCTGCAAATAGACCCCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATG                       <  SRR4302543.948793/94‑1 (MQ=60)

                                                                       ATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATG                       >  SRR4302543.6475845/1‑94 (MQ=60)

                                                                       ATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATG                       >  SRR4302543.635538/1‑94 (MQ=60)

                                                                       ATACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATG                       >  SRR4302543.6184126/1‑94 (MQ=60)

                                                                       ATACGCGTCAAATAGACACCCACTCCGGTACGCCAGCATTGATGATTTCCATCCAGACCGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATG                       <  SRR4302543.4274955/94‑1 (MQ=60)

                                                                        TACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGC                      <  SRR4302543.266758/94‑1 (MQ=60)

                                                                        TACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGC                      >  SRR4302543.1613028/1‑94 (MQ=60)

                                                                         ACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCC                     >  SRR4302543.5769695/1‑94 (MQ=60)

                                                                         ACGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCC                     <  SRR4302543.7355756/94‑1 (MQ=60)

                                                                          CGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCC                    >  SRR4302543.101856/1‑94 (MQ=60)

                                                                          CGCTGCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCC                    >  SRR4302543.3507875/1‑94 (MQ=60)

                                                                            CTGCAAATAGACACCCCCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGA                  <  SRR4302543.2545000/94‑1 (MQ=60)

                                                                              GCAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAA                <  SRR4302543.609957/94‑1 (MQ=60)

                                                                               CAAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAAG               >  SRR4302543.2756797/1‑94 (MQ=60)

                                                                                AAATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATG              <  SRR4302543.5244541/94‑1 (MQ=60)

                                                                                 AATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGG             >  SRR4302543.2609075/1‑94 (MQ=60)

                                                                                 AATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGG             <  SRR4302543.2107203/94‑1 (MQ=60)

                                                                                  ATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGG            <  SRR4302543.5523016/94‑1 (MQ=60)

                                                                                  ATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGG            <  SRR4302543.2665948/94‑1 (MQ=60)

                                                                                  ATAGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGG            >  SRR4302543.2599875/1‑94 (MQ=60)

                                                                                    AGACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGAT          <  SRR4302543.2459952/94‑1 (MQ=60)

                                                                                    AAACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGAT          <  SRR4302543.1968872/94‑1 (MQ=60)

                                                                                     GACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATG         <  SRR4302543.2818374/94‑1 (MQ=60)

                                                                                      ACTCCCTCTCCGGTACGCCAACATTGATGATTTCCATCCAGAAAGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGG        <  SRR4302543.3020037/94‑1 (MQ=60)

                                                                                      ACACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGG        <  SRR4302543.1776036/94‑1 (MQ=60)

                                                                                       CACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGT       >  SRR4302543.5723921/1‑94 (MQ=60)

                                                                                       CACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGA       <  SRR4302543.7316494/94‑1 (MQ=60)

                                                                                        cgCCGCTCCGGTACGCAAACATTGATGACTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGCCGGTGAATGCCCGAAATGGGATGGAT      <  SRR4302543.5184226/92‑1 (MQ=60)

                                                                                        ACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGAT      <  SRR4302543.6622026/94‑1 (MQ=60)

                                                                                        ACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGAT      >  SRR4302543.5435489/1‑94 (MQ=60)

                                                                                        ACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGAT      >  SRR4302543.795823/1‑94 (MQ=60)

                                                                                        ACCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGAT      >  SRR4302543.1490878/1‑94 (MQ=60)

                                                                                         CCCACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATT     >  SRR4302543.7915683/1‑94 (MQ=60)

                                                                                           CACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTAC   >  SRR4302543.6492483/1‑94 (MQ=60)

                                                                                           CACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTAC   >  SRR4302543.4660976/1‑94 (MQ=60)

                                                                                           CACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTAC   >  SRR4302543.759195/1‑94 (MQ=60)

                                                                                           CACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTAC   >  SRR4302543.2633064/1‑94 (MQ=60)

                                                                                           CACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTAC   >  SRR4302543.5759880/1‑94 (MQ=60)

                                                                                            ACTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTACC  >  SRR4302543.6134686/1‑94 (MQ=60)

CAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTACC  >  NC_000913/3735323‑3735508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`