Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,739,740 |
A→G |
M141T (ATG→ACG) |
yiaJ ← |
putative regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,739,740 | 0 | A | G | 99.6%
| 687.9
/ ‑4.8
| 220 | M141T (ATG→ACG) | yiaJ | putative regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (109/110); total (109/111) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.44e-01 |
Only 100 of 235 total aligned reads displayed.
TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC > NC_000913/3739650‑3739829
|
tAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTc > 1:4473072/1‑93 (MQ=255)
tAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTc < 1:1927343/93‑1 (MQ=255)
aGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTcc < 2:720291/93‑1 (MQ=255)
tCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCg < 1:1108341/93‑1 (MQ=255)
ccGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCgg < 1:2805842/93‑1 (MQ=255)
cGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGt < 1:2922966/93‑1 (MQ=255)
ggTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTATAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtg < 1:1944183/93‑1 (MQ=255)
ggTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGGtg > 2:1828349/1‑93 (MQ=255)
gTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgt < 2:1866316/93‑1 (MQ=255)
tGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgtg < 1:1828145/93‑1 (MQ=255)
tGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgtg < 1:4182745/93‑1 (MQ=255)
tGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgtg > 1:4427931/1‑93 (MQ=255)
aCCAAACGCCATGTAGATCTTGCTCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTggg > 1:967165/1‑93 (MQ=255)
aCCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTggg > 2:2745987/1‑93 (MQ=255)
aCCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTggg < 1:4332516/93‑1 (MQ=255)
ccAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGt < 1:782680/93‑1 (MQ=255)
cAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGtt > 1:517513/1‑93 (MQ=255)
aaaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTc < 1:3618438/93‑1 (MQ=255)
aaaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTc > 2:2661843/1‑93 (MQ=255)
gCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGc > 2:4571210/1‑93 (MQ=255)
aTGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTta > 2:809849/1‑93 (MQ=255)
gcaGATCTTGCCCATAGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtata < 2:47221/91‑1 (MQ=255)
gTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtata < 2:1762505/93‑1 (MQ=255)
gTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtata > 1:6200/1‑93 (MQ=255)
aGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATaaa < 1:2964589/93‑1 (MQ=255)
gATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAAt > 2:4498047/1‑93 (MQ=255)
tCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCa > 2:1161814/1‑93 (MQ=255)
tCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCa > 2:1991467/1‑93 (MQ=255)
tCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCa > 2:2344422/1‑93 (MQ=255)
tCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCa > 1:2683706/1‑93 (MQ=255)
cTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCaa > 1:3428897/1‑93 (MQ=255)
cTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCaa > 2:3499776/1‑93 (MQ=255)
ttGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTGCAGCTTATAAATCaaa > 2:4161348/1‑93 (MQ=255)
ttGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATaaaa > 2:3954482/1‑93 (MQ=255)
ttGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCaaa > 2:1832996/1‑93 (MQ=255)
tGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCaaaa < 1:1737010/93‑1 (MQ=255)
gCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAt > 2:3220713/1‑93 (MQ=255)
cccATTGCGGATCAGTAGAGCGGCATACGCTGGCCAATATATGCACGGGTTCGCAGCCTCCCGGTTGTGGGTTCCATCTTATAAATCAAAATa > 2:4339899/1‑93 (MQ=255)
cccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATa < 2:1455308/93‑1 (MQ=255)
ccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAg < 1:3215437/93‑1 (MQ=255)
ccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAg > 2:3423688/1‑93 (MQ=255)
ccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAg > 1:2837313/1‑93 (MQ=255)
ccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAg > 2:2371235/1‑93 (MQ=255)
cATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc < 1:2744134/93‑1 (MQ=255)
cATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc > 2:1792714/1‑93 (MQ=255)
aTTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCg > 1:929876/1‑93 (MQ=255)
aTTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCg > 1:1463069/1‑93 (MQ=255)
ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt > 2:2834358/1‑93 (MQ=255)
ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt < 2:4174096/93‑1 (MQ=255)
ggAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATc < 2:3251838/93‑1 (MQ=255)
ggAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATc > 2:210552/1‑93 (MQ=255)
gAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCg > 1:3621953/1‑93 (MQ=255)
gAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCg > 1:2340801/1‑93 (MQ=255)
cAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCt < 2:2119701/93‑1 (MQ=255)
cAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCt > 1:2091015/1‑93 (MQ=255)
aGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCtt > 1:384010/1‑93 (MQ=255)
aGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCtt < 1:840653/93‑1 (MQ=255)
gTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTc > 1:1709667/1‑93 (MQ=255)
gTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTc > 2:3513025/1‑93 (MQ=255)
gagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgcg > 2:938939/1‑93 (MQ=255)
gagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgcg > 1:4220424/1‑93 (MQ=255)
ggCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTg > 2:1576288/1‑93 (MQ=255)
tatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgaga > 2:3882437/1‑93 (MQ=255)
tatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgaga > 2:2408253/1‑93 (MQ=255)
atGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGaa < 1:1040178/93‑1 (MQ=255)
atGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGaa > 2:230508/1‑93 (MQ=255)
atGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGaa < 1:2047555/93‑1 (MQ=255)
tGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAg > 2:1150691/1‑93 (MQ=255)
tGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCCGGGGAAGTTa > 2:2898524/1‑93 (MQ=255)
ggCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGGGGAGTTaa > 2:299903/1‑93 (MQ=255)
gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt < 1:2201655/93‑1 (MQ=255)
gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt < 2:2986049/93‑1 (MQ=255)
gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt > 2:2856292/1‑93 (MQ=255)
cAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATgg > 2:2460063/1‑93 (MQ=255)
cAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATgg > 1:2537972/1‑93 (MQ=255)
cAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATgg < 1:1395232/93‑1 (MQ=255)
cAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATgg > 1:1177125/1‑93 (MQ=255)
aaTATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGt < 1:4625078/93‑1 (MQ=255)
atatAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGtt < 1:2408869/93‑1 (MQ=255)
atatAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGtt > 1:1583307/1‑93 (MQ=255)
ataGGCACGGGTTCGCAGCGGCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTc < 1:2986203/93‑1 (MQ=255)
taGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAGAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCa > 1:3299541/1‑93 (MQ=255)
ggCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAcc < 1:3560588/93‑1 (MQ=255)
gCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCa < 2:160099/93‑1 (MQ=255)
gCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCa < 2:2750738/93‑1 (MQ=255)
gCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCa < 1:1971663/93‑1 (MQ=255)
cACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAg < 2:1015574/93‑1 (MQ=255)
aCGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGt < 2:2549976/93‑1 (MQ=255)
aCGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGt > 1:2298129/1‑93 (MQ=255)
gtttCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTGCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGc < 1:4315535/91‑1 (MQ=255)
ggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGc < 2:4034052/93‑1 (MQ=255)
ggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGc < 2:516779/93‑1 (MQ=255)
gTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCg < 2:1953185/93‑1 (MQ=255)
ttCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGa < 2:2196842/93‑1 (MQ=255)
ttCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGGTTCACCAGTGGCGa > 2:1786925/1‑93 (MQ=255)
tCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAt > 1:4070940/1‑93 (MQ=255)
cGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATg < 2:1359169/93‑1 (MQ=255)
cagcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGtt > 2:4442922/1‑93 (MQ=255)
cagcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGtt > 2:3035105/1‑93 (MQ=255)
agcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTc > 1:3791122/1‑93 (MQ=255)
|
TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC > NC_000913/3739650‑3739829
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG > NC_000913/3739647‑3739833
|
ACGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCG < SRR4302535.2116215/94‑1 (MQ=60)
GTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTC > SRR4302535.4503769/1‑94 (MQ=60)
GTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTC < SRR4302535.1761520/94‑1 (MQ=60)
TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCC < SRR4302535.1941234/94‑1 (MQ=60)
TCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGG < SRR4302535.1116259/94‑1 (MQ=60)
TCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGG < SRR4302535.1706512/94‑1 (MQ=60)
CCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGT < SRR4302535.2825790/94‑1 (MQ=60)
CGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTT < SRR4302535.2943580/94‑1 (MQ=60)
GGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTG < SRR4302535.3244335/94‑1 (MQ=60)
GGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTATAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGT < SRR4302535.1958183/94‑1 (MQ=60)
GGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGT > SRR4302535.588183/1‑94 (MQ=60)
GGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGT > SRR4302535.4360131/1‑94 (MQ=60)
GTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTG > SRR4302535.4458262/1‑94 (MQ=60)
TGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGG < SRR4302535.1841345/94‑1 (MQ=60)
TGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGG < SRR4302535.4211364/94‑1 (MQ=60)
GACCAAACGCCATGTAGATCTTGCTCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGG > SRR4302535.974036/1‑94 (MQ=60)
ACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGT < SRR4302535.3863773/94‑1 (MQ=60)
ACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGT < SRR4302535.4362145/94‑1 (MQ=60)
CCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTT > SRR4302535.440869/1‑94 (MQ=60)
CCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTT > SRR4302535.4463303/1‑94 (MQ=60)
CCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTT > SRR4302535.521134/1‑94 (MQ=60)
CCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTT < SRR4302535.788173/94‑1 (MQ=60)
CAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTC < SRR4302535.2910580/94‑1 (MQ=60)
AAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCC < SRR4302535.3643523/94‑1 (MQ=60)
AACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCA < SRR4302535.2246146/94‑1 (MQ=60)
CATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCGGGTTGTGGtttcaagttat > SRR4302535.364347/1‑83 (MQ=60)
CATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTA > SRR4302535.904406/1‑94 (MQ=60)
TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA > SRR4302535.6252/1‑94 (MQ=60)
TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA > SRR4302535.1370657/1‑94 (MQ=60)
TAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAA < SRR4302535.275381/94‑1 (MQ=60)
AGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATATGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAAT > SRR4302535.2345063/1‑94 (MQ=60)
AGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAAT < SRR4302535.2985393/94‑1 (MQ=60)
ATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCA > SRR4302535.3120940/1‑94 (MQ=60)
ATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCA < SRR4302535.285660/94‑1 (MQ=60)
ATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCA > SRR4302535.2702897/1‑94 (MQ=60)
ATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCA > SRR4302535.1092852/1‑94 (MQ=60)
TCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAA > SRR4302535.3452731/1‑94 (MQ=60)
TTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAA < SRR4302535.1931597/94‑1 (MQ=60)
TTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAA < SRR4302535.1742515/94‑1 (MQ=60)
TTGCCCATTGCGAAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAA < SRR4302535.2664717/94‑1 (MQ=60)
TGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAT < SRR4302535.981872/94‑1 (MQ=60)
TGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAT < SRR4302535.1749565/94‑1 (MQ=60)
GCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATA < SRR4302535.1799642/94‑1 (MQ=60)
GCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATA < SRR4302535.2989803/94‑1 (MQ=60)
GCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATA < SRR4302535.474491/94‑1 (MQ=60)
CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG < SRR4302535.4347252/94‑1 (MQ=60)
CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG < SRR4302535.4588556/94‑1 (MQ=60)
CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG < SRR4302535.2813981/94‑1 (MQ=60)
CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG > SRR4302535.2857447/1‑94 (MQ=60)
CCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGC < SRR4302535.3237706/94‑1 (MQ=60)
CATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCG > SRR4302535.1473550/1‑94 (MQ=60)
CATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCG > SRR4302535.936454/1‑94 (MQ=60)
CATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCG < SRR4302535.2763695/94‑1 (MQ=60)
TTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTG < SRR4302535.3527672/94‑1 (MQ=60)
TTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTG < SRR4302535.1945435/94‑1 (MQ=60)
TGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGA > SRR4302535.966231/1‑94 (MQ=60)
CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC < SRR4302535.4152274/94‑1 (MQ=60)
ggagtgggagatCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTACCAGCTTACAAATCAAAATAGCGTGAGCG < SRR4302535.1896871/82‑1 (MQ=60)
GGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCG > SRR4302535.3647061/1‑94 (MQ=60)
GGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCG > SRR4302535.2357546/1‑94 (MQ=60)
GGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCG < SRR4302535.2749090/94‑1 (MQ=60)
GAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGT > SRR4302535.2964105/1‑94 (MQ=60)
GAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGT > SRR4302535.1563723/1‑94 (MQ=60)
GAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGT < SRR4302535.2314337/94‑1 (MQ=60)
ACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCT > SRR4302535.2106083/1‑94 (MQ=60)
CAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTT > SRR4302535.386670/1‑94 (MQ=60)
AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC < SRR4302535.846555/94‑1 (MQ=60)
AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC > SRR4302535.2508639/1‑94 (MQ=60)
AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC > SRR4302535.1722028/1‑94 (MQ=60)
AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC > SRR4302535.4500530/1‑94 (MQ=60)
AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC < SRR4302535.1163443/94‑1 (MQ=60)
GTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCG < SRR4302535.4223365/94‑1 (MQ=60)
GTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCG < SRR4302535.797047/94‑1 (MQ=60)
GTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCG < SRR4302535.2445344/94‑1 (MQ=60)
AGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCG > SRR4302535.4249303/1‑94 (MQ=60)
AGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGC > SRR4302535.1940189/1‑94 (MQ=60)
GGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGG > SRR4302535.1447584/1‑94 (MQ=60)
GGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGG > SRR4302535.551235/1‑94 (MQ=60)
ATATGCTGGCCAATATAGGCACGGGCTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGA > SRR4302535.342864/1‑94 (MQ=60)
TATGCTGGCCAATATAGGCACGGGTTCACAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAA < SRR4302535.2223152/94‑1 (MQ=60)
ATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAG < SRR4302535.1047557/94‑1 (MQ=60)
ATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAG > SRR4302535.2041591/1‑94 (MQ=60)
ATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAG < SRR4302535.2062297/94‑1 (MQ=60)
ATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAG < SRR4302535.3606084/94‑1 (MQ=60)
TGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGT > SRR4302535.2034988/1‑94 (MQ=60)
TGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGT < SRR4302535.1625809/94‑1 (MQ=60)
GCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTT < SRR4302535.876976/94‑1 (MQ=60)
GCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTT < SRR4302535.4315516/94‑1 (MQ=60)
GCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATG < SRR4302535.2217346/94‑1 (MQ=60)
CCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGG < SRR4302535.2933966/94‑1 (MQ=60)
CCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGG > SRR4302535.1185527/1‑94 (MQ=60)
CCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGG > SRR4302535.2556254/1‑94 (MQ=60)
CAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCANAATAGCGTNATCGTCTNCGCGGCTGGgggantnantngt > SRR4302535.959881/1‑81 (MQ=60)
CAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGT < SRR4302535.1405195/94‑1 (MQ=60)
AATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTT < SRR4302535.3178994/94‑1 (MQ=60)
AATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTT > SRR4302535.1594735/1‑94 (MQ=60)
AATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTT < SRR4302535.4656481/94‑1 (MQ=60)
ATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTT < SRR4302535.3777733/94‑1 (MQ=60)
ATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTT < SRR4302535.2426212/94‑1 (MQ=60)
ATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTT < SRR4302535.3480864/94‑1 (MQ=60)
ATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCA > SRR4302535.2193966/1‑94 (MQ=60)
ATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCA < SRR4302535.2368804/94‑1 (MQ=60)
ATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAGAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCA > SRR4302535.3322487/1‑94 (MQ=60)
ATAGGCACGGGTTCGCAGCGGCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCA < SRR4302535.3007147/94‑1 (MQ=60)
TAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAC < SRR4302535.4141315/94‑1 (MQ=60)
GGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCA < SRR4302535.3585276/94‑1 (MQ=60)
GCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAG > SRR4302535.672107/1‑94 (MQ=60)
GCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAG < SRR4302535.1985862/94‑1 (MQ=60)
CACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGT > SRR4302535.2314574/1‑94 (MQ=60)
CGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGCAGTTAATGGTTTCACCAGTGG > SRR4302535.1979871/1‑94 (MQ=60)
GTTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTGCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCG < SRR4302535.4345055/94‑1 (MQ=60)
TTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAT > SRR4302535.4098798/1‑94 (MQ=60)
GTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAT < SRR4302535.1207302/94‑1 (MQ=60)
GTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAT < SRR4302535.2104006/94‑1 (MQ=60)
GCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTT < SRR4302535.3649125/94‑1 (MQ=60)
CAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC > SRR4302535.4050852/1‑94 (MQ=60)
CAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC > SRR4302535.3817262/1‑94 (MQ=60)
GCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAG < SRR4302535.486955/94‑1 (MQ=60)
GCGTCCCGGTTGTGGGTGCCAGCTTAGAAATCAAGAGAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAG < SRR4302535.486954/94‑1 (MQ=60)
CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGT < SRR4302535.1120701/94‑1 (MQ=60)
GTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG < SRR4302535.2287432/94‑1 (MQ=60)
|
ACGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG > NC_000913/3739647‑3739833
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
