Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,739,740	A→G	M141T (ATG→ACG)	yiaJ ←	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,739,740	0	A	G	99.8%	1385.0 / NA	441	M141T (ATG→ACG)	yiaJ	putative regulator
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (222/218); minor base C (0/1); total (222/219)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 459 total aligned reads displayed.

TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC  >  NC_000913/3739650‑3739829

   tCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCg                                                                                      <  2:5810852/93‑1 (MQ=255)

   tCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCg                                                                                      >  2:4494078/1‑93 (MQ=255)

    ccGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCgg                                                                                     <  2:4968770/93‑1 (MQ=255)

      gggTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGtt                                                                                   >  1:7527373/1‑93 (MQ=255)

      gggTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGtt                                                                                   <  2:5688545/93‑1 (MQ=255)

        gTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgt                                                                                 >  1:4923031/1‑93 (MQ=255)

         tGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgtg                                                                                >  1:1044255/1‑93 (MQ=255)

         tGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgtg                                                                                >  2:436035/1‑93 (MQ=255)

         tGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgtg                                                                                <  2:4664942/93‑1 (MQ=255)

         tGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgtg                                                                                <  2:476288/93‑1 (MQ=255)

          gACCAAACGCGATGTAGATCTTGCCCATGGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTgg                                                                               <  2:229793/93‑1 (MQ=255)

          gACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTgg                                                                               <  1:4413428/93‑1 (MQ=255)

             cAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGtt                                                                            >  2:2911865/1‑93 (MQ=255)

              aaaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTc                                                                           <  2:3102774/93‑1 (MQ=255)

               aaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTcc                                                                          <  2:2093980/93‑1 (MQ=255)

                aCGCCATGTAGATCTTGCCCATTGCGGAGCAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCa                                                                         <  1:2042794/93‑1 (MQ=255)

                aCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCa                                                                         <  2:5591906/93‑1 (MQ=255)

                aCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCa                                                                         <  2:6616378/93‑1 (MQ=255)

                aCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCa                                                                         <  2:1179328/93‑1 (MQ=255)

                  gCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGc                                                                       >  2:331107/1‑93 (MQ=255)

                    cATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCtt                                                                     >  1:2903779/1‑93 (MQ=255)

                     aTGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTta                                                                    >  1:56597/1‑93 (MQ=255)

                     aTGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTta                                                                    >  1:7444078/1‑93 (MQ=255)

                     aTGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGAACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTta                                                                    >  2:5255362/1‑93 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtat                                                                   <  2:2387195/93‑1 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtat                                                                   <  1:7856380/93‑1 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtat                                                                   >  1:961953/1‑93 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTaat                                                                   >  1:7761425/1‑93 (MQ=255)

                       gTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtata                                                                  >  1:4641106/1‑93 (MQ=255)

                        tAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATGTAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATaa                                                                 >  1:860882/1‑93 (MQ=255)

                        tAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATaa                                                                 >  2:6813647/1‑93 (MQ=255)

                        tAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATaa                                                                 >  1:6106311/1‑93 (MQ=255)

                          gATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAAt                                                               >  1:6423257/1‑93 (MQ=255)

                           aTCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATc                                                              >  2:3023862/1‑93 (MQ=255)

                           aTCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATc                                                              <  2:2658464/93‑1 (MQ=255)

                             cTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCGCGGGTTCGCAGCGTCCGGGGTGTGGGTTCCAGCTTATAAATCaa                                                            <  2:7238723/93‑1 (MQ=255)

                              ttGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCaaa                                                           <  1:3283338/93‑1 (MQ=255)

                              ttGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCaaa                                                           >  1:3062907/1‑93 (MQ=255)

                                gCCCATGGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAt                                                         <  2:4155539/93‑1 (MQ=255)

                                 cccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATa                                                        <  1:2759119/93‑1 (MQ=255)

                                   cATTGCGGAACAGTAGAGCGGNATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc                                                      <  1:1129909/93‑1 (MQ=255)

                                   cATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc                                                      >  2:499348/1‑93 (MQ=255)

                                   cATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc                                                      >  1:4730151/1‑93 (MQ=255)

                                   cATTGCGGAACAGTAGAGCGGCATATGCTCGCCAATATAGGCATGGGTTCGCAGCCTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc                                                      <  1:5222325/93‑1 (MQ=255)

                                    aTTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCg                                                     <  1:5777908/93‑1 (MQ=255)

                                     ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt                                                    <  2:1928470/93‑1 (MQ=255)

                                       gCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGa                                                  <  2:6002121/93‑1 (MQ=255)

                                        acgAACAGTAGAGGCGGATATTCGGGCCAACATTGGCACGGGTTCGCACCGCCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGAt                                                 <  1:2514643/91‑1 (MQ=255)

                                         ggAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATc                                                >  2:619361/1‑93 (MQ=255)

                                         ggAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATc                                                <  2:6713249/93‑1 (MQ=255)

                                         ggAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATc                                                >  1:4792685/1‑93 (MQ=255)

                                         ggAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATc                                                >  1:3565106/1‑93 (MQ=255)

                                          gAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCg                                               <  1:1588121/93‑1 (MQ=255)

                                          gAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCg                                               >  2:1631031/1‑93 (MQ=255)

                                          gAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCg                                               >  1:3151819/1‑93 (MQ=255)

                                             cAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCt                                            <  1:1781544/93‑1 (MQ=255)

                                               gTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTc                                          <  1:349207/93‑1 (MQ=255)

                                               gTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTc                                          <  2:6761152/93‑1 (MQ=255)

                                               gTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTc                                          >  1:6899564/1‑93 (MQ=255)

                                                tAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcg                                         <  1:3924928/93‑1 (MQ=255)

                                                 agagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgc                                        <  2:7629041/93‑1 (MQ=255)

                                                 agagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgc                                        >  1:6221694/1‑93 (MQ=255)

                                                  gagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTtgcg                                       >  2:5378784/1‑93 (MQ=255)

                                                  gagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgcg                                       >  2:1447508/1‑93 (MQ=255)

                                                    gCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGc                                     >  2:6325182/1‑93 (MQ=255)

                                                      ggCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTg                                   <  2:1352412/93‑1 (MQ=255)

                                                       gCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTgg                                  >  2:7404592/1‑93 (MQ=255)

                                                        cATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGga                                 >  2:6560054/1‑93 (MQ=255)

                                                        cATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGga                                 <  2:3711759/93‑1 (MQ=255)

                                                         atatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgag                                >  1:124806/1‑93 (MQ=255)

                                                          tatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgaga                               >  1:2414760/1‑93 (MQ=255)

                                                          tatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgaga                               >  1:4335121/1‑93 (MQ=255)

                                                          tatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgaga                               >  2:3575158/1‑93 (MQ=255)

                                                                ggCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTaa                         <  2:1042897/93‑1 (MQ=255)

                                                                gcccATTATTGGCACGGTTTCGCGGCGTCCCGTTTGTGGGTCCCGGC‑TATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt                        <  2:642929/91‑1 (MQ=255)

                                                                 gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt                        >  2:5142618/1‑93 (MQ=255)

                                                                 gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt                        <  1:6553933/93‑1 (MQ=255)

                                                                 gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt                        <  1:3717900/93‑1 (MQ=255)

                                                                 gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt                        <  2:713557/93‑1 (MQ=255)

                                                                 gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt                        >  1:1005327/1‑93 (MQ=255)

                                                                  ccAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATg                       <  1:7416083/93‑1 (MQ=255)

                                                                    aaTATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGt                     <  1:5430777/93‑1 (MQ=255)

                                                                    aaTATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGt                     >  1:6471139/1‑93 (MQ=255)

                                                                      tataGGCACGGGTTCGCAGCGTCCCGGTTGCGGGGTCCAGCTTATAAATCAAAATAGCGCGATCGTCTTCACGCGTGGGGTAGTTAATGGttt                   >  1:5943256/1‑93 (MQ=255)

                                                                        taGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCa                 <  1:2243897/93‑1 (MQ=255)

                                                                             aCGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCatt            <  2:4234789/93‑3 (MQ=255)

                                                                             aCGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGt            <  2:961650/93‑1 (MQ=255)

                                                                             aCGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGt            <  1:5155562/93‑1 (MQ=255)

                                                                              cGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTg           >  2:1557764/1‑93 (MQ=255)

                                                                              cGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTg           >  2:846662/1‑93 (MQ=255)

                                                                               gggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGGTAATGGTTTCACCAGTgg          >  2:2059761/1‑93 (MQ=255)

                                                                                ggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCCGTggg         >  2:6978479/1‑92 (MQ=255)

                                                                                ggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGc         <  2:7862983/93‑1 (MQ=255)

                                                                                ggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGGTTCACCAGTGGc         >  1:1463681/1‑93 (MQ=255)

                                                                                ggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGGTAATTGTTTCACCAggggg         >  1:4171424/1‑92 (MQ=255)

                                                                                 gTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCg        >  1:6799665/1‑93 (MQ=255)

                                                                                  ttCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGa       <  2:3382503/93‑1 (MQ=255)

                                                                                   tCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAt      <  2:2853800/93‑1 (MQ=255)

                                                                                     gcagcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGt    >  1:7155271/1‑93 (MQ=255)

                                                                                       agcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTc  >  1:53630/1‑93 (MQ=255)

TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC  >  NC_000913/3739650‑3739829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 238 total aligned reads displayed.

CGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG  >  NC_000913/3739648‑3739833

CGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGT                                                                                              >  SRR4302543.7505876/1‑94 (MQ=60)

CGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGT                                                                                              >  SRR4302543.7288758/1‑94 (MQ=60)

 GTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTC                                                                                             <  SRR4302543.5800644/94‑1 (MQ=60)

   AGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCC                                                                                           >  SRR4302543.7949387/1‑94 (MQ=60)

   AGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCC                                                                                           >  SRR4302543.637871/1‑94 (MQ=60)

    GTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          >  SRR4302543.3416418/1‑94 (MQ=60)

    GTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          >  SRR4302543.5305951/1‑94 (MQ=60)

    GTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          <  SRR4302543.6320171/94‑1 (MQ=60)

    GTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          <  SRR4302543.1580238/94‑1 (MQ=60)

    GTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          <  SRR4302543.7527126/94‑1 (MQ=60)

    GTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          >  SRR4302543.1570822/1‑94 (MQ=60)

    ATCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          <  SRR4302543.6515133/94‑1 (MQ=60)

     TCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGG                                                                                         >  SRR4302543.2886433/1‑94 (MQ=60)

       CGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTT                                                                                       >  SRR4302543.7599183/1‑94 (MQ=60)

         GGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGT                                                                                     >  SRR4302543.4967884/1‑94 (MQ=60)

          GTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTG                                                                                    >  SRR4302543.1053569/1‑94 (MQ=60)

          GTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTG                                                                                    >  SRR4302543.7506774/1‑94 (MQ=60)

           TGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGG                                                                                   >  SRR4302543.5181906/1‑94 (MQ=60)

           TGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGG                                                                                   <  SRR4302543.6920125/94‑1 (MQ=60)

            GACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGG                                                                                  <  SRR4302543.1106388/94‑1 (MQ=60)

            GACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGG                                                                                  >  SRR4302543.3620432/1‑94 (MQ=60)

            GACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGG                                                                                  <  SRR4302543.4453430/94‑1 (MQ=60)

             ACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGT                                                                                 >  SRR4302543.5760284/1‑94 (MQ=60)

             ACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGT                                                                                 >  SRR4302543.4687786/1‑94 (MQ=60)

              CCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTT                                                                                <  SRR4302543.3141897/94‑1 (MQ=60)

              CCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTT                                                                                >  SRR4302543.7626222/1‑94 (MQ=60)

              CCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTT                                                                                >  SRR4302543.4453952/1‑94 (MQ=60)

               CAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTC                                                                               >  SRR4302543.7487373/1‑94 (MQ=60)

                AAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCC                                                                              >  SRR4302543.314796/1‑94 (MQ=60)

                AAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCC                                                                              >  SRR4302543.2465197/1‑94 (MQ=60)

                 AACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCA                                                                             <  SRR4302543.6524577/94‑1 (MQ=60)

                 AACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCA                                                                             >  SRR4302543.717843/1‑94 (MQ=60)

                  ACGCCATGTAGATCTTGCCCATTGCGGAGCAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAG                                                                            <  SRR4302543.2061110/94‑1 (MQ=60)

                  ACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAG                                                                            <  SRR4302543.5230935/94‑1 (MQ=60)

                  ACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAG                                                                            <  SRR4302543.886779/94‑1 (MQ=60)

                  ACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAG                                                                            <  SRR4302543.6399947/94‑1 (MQ=60)

                   CGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGC                                                                           >  SRR4302543.5628403/1‑94 (MQ=60)

                   CGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGC                                                                           >  SRR4302543.732034/1‑94 (MQ=60)

                     CCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTT                                                                         >  SRR4302543.5786977/1‑94 (MQ=60)

                     CCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTT                                                                         <  SRR4302543.6230845/94‑1 (MQ=60)

                     CCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTT                                                                         >  SRR4302543.2930178/1‑94 (MQ=60)

                      CATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTA                                                                        >  SRR4302543.3871141/1‑94 (MQ=60)

                       ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302543.970394/1‑94 (MQ=60)

                       ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302543.5708649/1‑94 (MQ=60)

                       ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302543.970395/1‑94 (MQ=60)

                       ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302543.1017612/1‑94 (MQ=60)

                       ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTAAT                                                                       >  SRR4302543.7834674/1‑94 (MQ=60)

                        TGTAGATCTTGCCCATTGCGGAACAGTAGATCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      <  SRR4302543.1171310/94‑1 (MQ=60)

                        TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGGATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      >  SRR4302543.4393891/1‑94 (MQ=60)

                        TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      >  SRR4302543.4683322/1‑94 (MQ=60)

                        TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      <  SRR4302543.749189/94‑1 (MQ=60)

                        TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      <  SRR4302543.7930392/94‑1 (MQ=60)

                         GTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATGTAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAA                                                                     >  SRR4302543.868552/1‑94 (MQ=60)

                         GTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAA                                                                     >  SRR4302543.3238205/1‑94 (MQ=60)

                         GTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAA                                                                     >  SRR4302543.5182164/1‑94 (MQ=60)

                         GTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAA                                                                     >  SRR4302543.6164164/1‑94 (MQ=60)

                          TAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCCGCTTATAAA                                                                    >  SRR4302543.1033581/1‑94 (MQ=60)

                          TAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAA                                                                    <  SRR4302543.898338/94‑1 (MQ=60)

                          TAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAA                                                                    >  SRR4302543.1033580/1‑94 (MQ=60)

                           AGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAAT                                                                   >  SRR4302543.5168187/1‑94 (MQ=60)

                            GATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATC                                                                  >  SRR4302543.2158412/1‑94 (MQ=60)

                            GATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATC                                                                  >  SRR4302543.4943771/1‑94 (MQ=60)

                             ATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCA                                                                 <  SRR4302543.1596659/94‑1 (MQ=60)

                               CTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAA                                                               >  SRR4302543.3090456/1‑94 (MQ=60)

                                TTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAA                                                              <  SRR4302543.3312973/94‑1 (MQ=60)

                                  GCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATA                                                            <  SRR4302543.4411651/94‑1 (MQ=60)

                                   CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG                                                           >  SRR4302543.426787/1‑94 (MQ=60)

                                   CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG                                                           <  SRR4302543.6852186/94‑1 (MQ=60)

                                   CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG                                                           <  SRR4302543.2784222/94‑1 (MQ=60)

                                   CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG                                                           <  SRR4302543.1398173/94‑1 (MQ=60)

                                    CCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGC                                                          >  SRR4302543.1309695/1‑94 (MQ=60)

                                    CCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGC                                                          <  SRR4302543.6054804/94‑1 (MQ=60)

                                    CCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGC                                                          <  SRR4302543.4729369/94‑1 (MQ=60)

                                    CCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGC                                                          >  SRR4302543.4773117/1‑94 (MQ=60)

                                    CCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGC                                                          <  SRR4302543.3535585/94‑1 (MQ=60)

                                    CCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGC                                                          <  SRR4302543.231775/94‑1 (MQ=60)

                                    CCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGC                                                          >  SRR4302543.2686885/1‑94 (MQ=60)

                                     CATTGCGGAACAGTAGAGCGGNATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCG                                                         <  SRR4302543.1140162/94‑1 (MQ=60)

                                     CATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCG                                                         <  SRR4302543.4884715/94‑1 (MQ=60)

                                     CATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCG                                                         >  SRR4302543.28664/1‑94 (MQ=60)

                                     CATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCG                                                         <  SRR4302543.3118300/94‑1 (MQ=60)

                                     CATTGCGGAACAGTAGAGCGGCATATGCTCGCCAATATAGGCATGGGTTCGCAGCCTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCG                                                         <  SRR4302543.5269352/94‑1 (MQ=60)

                                      ATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATGAATCAAAATAGCGG                                                        >  SRR4302543.1800553/1‑94 (MQ=60)

                                      ATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGT                                                        <  SRR4302543.313035/94‑1 (MQ=60)

                                      ATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGT                                                        <  SRR4302543.5830501/94‑1 (MQ=60)

                                        TGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGA                                                      <  SRR4302543.6126929/94‑1 (MQ=60)

                                        TGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGA                                                      <  SRR4302543.1441373/94‑1 (MQ=60)

                                         GCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGAT                                                     <  SRR4302543.1199060/94‑1 (MQ=60)

                                         GCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGAT                                                     <  SRR4302543.1061728/94‑1 (MQ=60)

                                          acgaacagtagaggcggatattcgggccaacattGGCACGGGTTCGCACCGCCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    <  SRR4302543.2537478/60‑1 (MQ=60)

                                          CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    >  SRR4302543.4836490/1‑94 (MQ=60)

                                          CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    <  SRR4302543.2537479/94‑1 (MQ=60)

                                          CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    <  SRR4302543.5267294/94‑1 (MQ=60)

                                          CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    >  SRR4302543.4836491/1‑94 (MQ=60)

                                          CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    >  SRR4302543.3596655/1‑94 (MQ=60)

                                          CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    <  SRR4302543.3952941/94‑1 (MQ=60)

                                           GGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCG                                                   <  SRR4302543.5385611/94‑1 (MQ=60)

                                           GGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCG                                                   >  SRR4302543.7607902/1‑94 (MQ=60)

                                           GGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCG                                                   >  SRR4302543.566456/1‑94 (MQ=60)

                                           GGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCG                                                   <  SRR4302543.1692636/94‑1 (MQ=60)

                                            GAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGT                                                  <  SRR4302543.1602300/94‑1 (MQ=60)

                                             AACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTC                                                 >  SRR4302543.3767615/1‑94 (MQ=60)

                                             AACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGCCCCGGTGGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTT                                                 >  SRR4302543.3423092/1‑94 (MQ=60)

                                              ACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCT                                                >  SRR4302543.4504674/1‑94 (MQ=60)

                                              ACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCT                                                <  SRR4302543.949864/94‑1 (MQ=60)

                                               CAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTT                                               <  SRR4302543.2525488/94‑1 (MQ=60)

                                               CAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTT                                               <  SRR4302543.1797474/94‑1 (MQ=60)

                                                AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC                                              >  SRR4302543.2068918/1‑94 (MQ=60)

                                                AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC                                              >  SRR4302543.6964402/1‑94 (MQ=60)

                                                AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC                                              >  SRR4302543.4817171/1‑94 (MQ=60)

                                                AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC                                              >  SRR4302543.2430734/1‑94 (MQ=60)

                                                 GTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCG                                             <  SRR4302543.352437/94‑1 (MQ=60)

                                                 GTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCG                                             <  SRR4302543.4740884/94‑1 (MQ=60)

                                                  TAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGC                                            >  SRR4302543.1907085/1‑94 (MQ=60)

                                                  TAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGC                                            >  SRR4302543.6280427/1‑94 (MQ=60)

                                                  TAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGC                                            >  SRR4302543.7590588/1‑94 (MQ=60)

                                                   AGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCG                                           <  SRR4302543.107807/94‑1 (MQ=60)

                                                   AGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCG                                           <  SRR4302543.1788702/94‑1 (MQ=60)

                                                    GAGCGGCATATGCTGGCCACTCTCGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTCTAAATCAAAGTAGCGTGATCGTCTTCGCGG                                          <  SRR4302543.7089041/94‑1 (MQ=60)

                                                    GAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGG                                          <  SRR4302543.4855519/94‑1 (MQ=60)

                                                    GAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGG                                          <  SRR4302543.7845581/94‑1 (MQ=60)

                                                      GCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCT                                        <  SRR4302543.7239540/94‑1 (MQ=60)

                                                       CGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTG                                       >  SRR4302543.5460803/1‑94 (MQ=60)

                                                        GGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGG                                      >  SRR4302543.4155133/1‑94 (MQ=60)

                                                        GGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGG                                      <  SRR4302543.4071013/94‑1 (MQ=60)

                                                         GCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGG                                     >  SRR4302543.795679/1‑94 (MQ=60)

                                                         GCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGA                                     >  SRR4302543.3545221/1‑94 (MQ=60)

                                                          CATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAG                                    >  SRR4302543.125933/1‑94 (MQ=60)

                                                          CATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAG                                    >  SRR4302543.3789025/1‑94 (MQ=60)

                                                           ATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGA                                   >  SRR4302543.5260447/1‑94 (MQ=60)

                                                           ATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGA                                   >  SRR4302543.2313487/1‑94 (MQ=60)

                                                           ATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGA                                   >  SRR4302543.4374444/1‑94 (MQ=60)

                                                           ATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGA                                   >  SRR4302543.4221195/1‑94 (MQ=60)

                                                              TGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGT                                <  SRR4302543.7839513/94‑1 (MQ=60)

                                                                  GGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAT                            >  SRR4302543.6606222/1‑94 (MQ=60)

                                                                  GGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAT                            >  SRR4302543.1014218/1‑94 (MQ=60)

                                                                   GCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATG                           <  SRR4302543.6615613/94‑1 (MQ=60)

                                                                   GCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATG                           <  SRR4302543.3750594/94‑1 (MQ=60)

                                                                   GCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATG                           >  SRR4302543.5963994/1‑94 (MQ=60)

                                                                   GCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATG                           <  SRR4302543.559510/94‑1 (MQ=60)

                                                                   GCCAATATAGACACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATG                           <  SRR4302543.2376091/94‑1 (MQ=60)

                                                                    CCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGG                          <  SRR4302543.5989122/94‑1 (MQ=60)

                                                                    CCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGG                          >  SRR4302543.3051282/1‑94 (MQ=60)

                                                                    CCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGG                          <  SRR4302543.7842517/94‑1 (MQ=60)

                                                                     CAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGT                         >  SRR4302543.6532104/1‑94 (MQ=60)

                                                                     CAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGT                         <  SRR4302543.357145/94‑1 (MQ=60)

                                                                     CAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAACTTATAAATCAAAATAGCGTGATCCTCTTCGCGGCTGTAGGAGTTAGTGGT                         >  SRR4302543.6532103/1‑94 (MQ=60)

                                                                      AATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTT                        <  SRR4302543.5480117/94‑1 (MQ=60)

                                                                       ATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTT                       >  SRR4302543.5814374/1‑94 (MQ=60)

                                                                       ATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTT                       <  SRR4302543.6228078/94‑1 (MQ=60)

                                                                       ATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTT                       <  SRR4302543.7491655/94‑1 (MQ=60)

                                                                       ATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTT                       <  SRR4302543.7379535/94‑1 (MQ=60)

                                                                       ATATAGGCACGGGTTCGCAGCGTCCCGGTTGCGGGGTCCAGCTTATAAATCAAAATAGCGCGATCGTCTTCACGCGTGGGGTAGTTAATGGTTT                       >  SRR4302543.5997645/1‑94 (MQ=57)

                                                                        TATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTC                      <  SRR4302543.5978838/94‑1 (MQ=60)

                                                                        TATAGGCACGGGTTCGCAGCGTCCAGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTC                      >  SRR4302543.6551361/1‑94 (MQ=60)

                                                                         ATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCA                     <  SRR4302543.4462943/94‑1 (MQ=60)

                                                                          TAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAC                    <  SRR4302543.2264251/94‑1 (MQ=60)

                                                                           AGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACC                   <  SRR4302543.1757563/94‑1 (MQ=60)

                                                                           AGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACC                   <  SRR4302543.3267808/94‑1 (MQ=60)

                                                                             GCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAG                 <  SRR4302543.3493586/94‑1 (MQ=60)

                                                                             GCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGGTTCACCAG                 >  SRR4302543.2981981/1‑94 (MQ=60)

                                                                             GCACGGGTTAGCAGCGTCCCGGTTGGGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCGCCAG                 <  SRR4302543.1444706/94‑1 (MQ=60)

                                                                              CACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCTCCAGG                >  SRR4302543.7599727/1‑94 (MQ=60)

                                                                              CACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGT                >  SRR4302543.5312990/1‑94 (MQ=60)

                                                                              CACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGT                >  SRR4302543.6602550/1‑94 (MQ=60)

                                                                              CACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGT                <  SRR4302543.6801457/94‑1 (MQ=60)

                                                                              CACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGG                >  SRR4302543.6329382/1‑94 (MQ=60)

                                                                               ACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTG               >  SRR4302543.2508323/1‑94 (MQ=60)

                                                                               ACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTG               >  SRR4302543.692860/1‑94 (MQ=60)

                                                                                CGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGGTTCACCAGTGG              >  SRR4302543.367613/1‑94 (MQ=60)

                                                                                 GGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCCCCAGTGGC             >  SRR4302543.2012393/1‑94 (MQ=60)

                                                                                 GGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGC             >  SRR4302543.5268920/1‑94 (MQ=60)

                                                                                 GGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGC             >  SRR4302543.4209200/1‑94 (MQ=60)

                                                                                 GGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGGTAATTGTTTCACCAGgggg             >  SRR4302543.4209198/1‑90 (MQ=60)

                                                                                  GGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCG            >  SRR4302543.6863875/1‑94 (MQ=60)

                                                                                  GGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCG            >  SRR4302543.2611220/1‑94 (MQ=60)

                                                                                  GGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCG            <  SRR4302543.3283056/94‑1 (MQ=60)

                                                                                  GGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCG            <  SRR4302543.7114336/94‑1 (MQ=60)

                                                                                   GTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGGAGTTAATGGCTTCACCAGTGGCGA           >  SRR4302543.7943001/1‑94 (MQ=60)

                                                                                   GTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGA           >  SRR4302543.4140363/1‑94 (MQ=60)

                                                                                    TTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAT          >  SRR4302543.2840600/1‑94 (MQ=60)

                                                                                    TTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAT          >  SRR4302543.7589075/1‑94 (MQ=60)

                                                                                    TTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAT          <  SRR4302543.4806773/94‑1 (MQ=60)

                                                                                      CGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGT        >  SRR4302543.6702760/1‑94 (MQ=60)

                                                                                      CGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGT        >  SRR4302543.6158233/1‑94 (MQ=60)

                                                                                      CGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGT        >  SRR4302543.6874762/1‑94 (MQ=60)

                                                                                        CAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGCGGAGTTCATGGTTGCACCAGGGGCGATGTTC      >  SRR4302543.54104/1‑94 (MQ=60)

                                                                                        CAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC      >  SRR4302543.54103/1‑94 (MQ=60)

                                                                                        CAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC      <  SRR4302543.6201533/94‑1 (MQ=60)

                                                                                         AGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCA     >  SRR4302543.2028901/1‑94 (MQ=60)

                                                                                         AGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCA     >  SRR4302543.1480121/1‑94 (MQ=60)

                                                                                          GCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAG    <  SRR4302543.7250594/94‑1 (MQ=60)

                                                                                          GCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAG    <  SRR4302543.4378711/94‑1 (MQ=60)

                                                                                           CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGGAGTTAATGGTTTCACCAGTGGCGATGTTCAGT   >  SRR4302543.2886753/1‑94 (MQ=60)

                                                                                           CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGT   >  SRR4302543.6983131/1‑94 (MQ=60)

                                                                                           CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGT   >  SRR4302543.6983130/1‑94 (MQ=60)

                                                                                           CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGT   <  SRR4302543.2489331/94‑1 (MQ=60)

                                                                                           CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGT   <  SRR4302543.4478975/94‑1 (MQ=60)

                                                                                           CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTGTCACCAGTGGCGATGTTCAGT   <  SRR4302543.3596342/94‑1 (MQ=60)

                                                                                            GTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG  >  SRR4302543.3476207/1‑94 (MQ=60)

CGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG  >  NC_000913/3739648‑3739833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`