Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,850,058 |
G→A |
G118G (GGC→GGT) |
ilvB ← |
acetolactate synthase I large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,850,058 | 0 | G | A | 100.0%
| 814.1
/ NA
| 230 | G118G (GGC→GGT) | ilvB | acetolactate synthase I large subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (127/103); total (127/103) |
Only 100 of 245 total aligned reads displayed.
CGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGT > NC_000913/3849968‑3850147
|
cGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTAcc < 2:2499789/93‑1 (MQ=255)
cGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTAcc > 1:996873/1‑93 (MQ=255)
gggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCg > 2:667971/1‑93 (MQ=255)
ggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGCTAGAGATGCCGTAGGTGTCCACTTCCCGGGAGGCGTCGGTACCGa > 2:2013966/1‑93 (MQ=255)
ggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGa > 2:3139591/1‑93 (MQ=255)
gAGTTCTTCGATATGTCTGACCGGATAGTTGTGATTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTAccaaa > 2:3240531/1‑90 (MQ=255)
gAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGat > 1:2868171/1‑93 (MQ=255)
aGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatc > 1:4551159/1‑93 (MQ=255)
gTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatca > 1:1073958/1‑93 (MQ=255)
gTTCTTCGATATGTCTGACCAGATAGTTCTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatca < 1:4508911/93‑1 (MQ=255)
tcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatcatc < 2:2735692/93‑1 (MQ=255)
tcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatcatc < 1:1854694/93‑1 (MQ=255)
cttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCg > 1:1235646/1‑93 (MQ=255)
cttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCg > 1:2704693/1‑93 (MQ=255)
ttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGa > 1:4446399/1‑93 (MQ=255)
ttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGa > 2:417160/1‑93 (MQ=255)
tcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAg < 2:3933025/93‑1 (MQ=255)
cGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAgg < 2:1752869/93‑1 (MQ=255)
gATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGc > 2:1184608/1‑93 (MQ=255)
gATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGGCGGGACCGATCATCGAggg > 2:3875877/1‑92 (MQ=255)
gATATGTCTAACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGc > 2:3775702/1‑93 (MQ=255)
catatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCCCTTCCTGGAAGGCGTCGGTACCGATCATCGAGGc < 1:3719344/92‑1 (MQ=255)
atatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCg > 1:886948/1‑93 (MQ=255)
tatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCgg > 1:1296648/1‑93 (MQ=255)
atGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCggg > 1:768710/1‑93 (MQ=255)
atGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCggg > 2:2128046/1‑93 (MQ=255)
gTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGaa < 1:3529185/93‑1 (MQ=255)
tCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAc < 2:4078109/93‑1 (MQ=255)
cTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAcc < 2:2815992/93‑1 (MQ=255)
cTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAcc < 1:2792231/93‑1 (MQ=255)
gACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTg > 2:150546/1‑93 (MQ=255)
gACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTg > 1:938576/1‑93 (MQ=255)
aCCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGa > 2:3058078/1‑93 (MQ=255)
aCCAGATAGCTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGa > 2:2082426/1‑93 (MQ=255)
ccAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAc > 1:3262582/1‑93 (MQ=255)
cAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAcc < 1:665980/93‑1 (MQ=255)
cAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAcc > 1:437747/1‑93 (MQ=255)
cAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTCTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAcc > 1:2514102/1‑93 (MQ=255)
aGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGCCCa > 1:1158102/1‑93 (MQ=255)
aGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCa < 2:1591246/93‑1 (MQ=255)
aGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCa < 1:2170042/93‑1 (MQ=255)
aGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCa > 1:4676179/1‑93 (MQ=255)
aGATAGTTGTGTTTGGGGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGAACCGATCATCGAGGCGGGAACCTGACCa > 2:3829537/1‑93 (MQ=255)
gATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAg > 1:1219262/1‑93 (MQ=255)
tAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGGACCTGACCAgcg > 2:1055272/1‑91 (MQ=255)
tAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTg > 2:3711675/1‑93 (MQ=255)
gTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAt > 2:4323379/1‑93 (MQ=255)
gTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAt > 1:1102872/1‑93 (MQ=255)
ttGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCCGTGATg > 2:2558121/1‑93 (MQ=255)
ttGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATg > 2:2242063/1‑93 (MQ=255)
ttGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATg > 1:4019867/1‑93 (MQ=255)
ttGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATg > 1:3544321/1‑93 (MQ=255)
tttGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAAt > 1:4574225/1‑93 (MQ=255)
ttGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATc < 1:3788890/93‑1 (MQ=255)
ttGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATc < 1:2580441/93‑1 (MQ=255)
gTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGc < 2:555396/93‑1 (MQ=255)
gATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCgg > 1:1954719/1‑93 (MQ=255)
gATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCgg < 2:3415209/93‑1 (MQ=255)
aTGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAACAGTGATGGAAATCAGCggg > 2:351741/1‑93 (MQ=255)
tGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGa < 1:1315853/93‑1 (MQ=255)
ggggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAt < 1:3404445/93‑1 (MQ=255)
ggggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAt < 1:4214423/93‑1 (MQ=255)
ggggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAt > 2:4275015/1‑93 (MQ=255)
ggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATgg < 2:2296381/93‑1 (MQ=255)
aTAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAg < 1:3303221/93‑1 (MQ=255)
aTAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAg > 2:4647196/1‑93 (MQ=255)
aTAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAg < 2:4399825/93‑1 (MQ=255)
tAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAgc > 1:3875361/1‑92 (MQ=255)
tAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGt > 1:190929/1‑93 (MQ=255)
agaTGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCa < 1:3138304/93‑1 (MQ=255)
gaTGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAg < 1:3022609/93‑1 (MQ=255)
gaTGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAg > 1:2942115/1‑93 (MQ=255)
tGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGcc < 1:1668856/93‑1 (MQ=255)
gTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCcgcga > 1:4634859/1‑92 (MQ=255)
gTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCgcgc > 1:3631843/1‑93 (MQ=255)
tAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCa > 1:3676910/1‑93 (MQ=255)
tgtCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCgg < 1:2457282/93‑1 (MQ=255)
gtCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGc > 2:1358861/1‑93 (MQ=255)
tCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGGGCATCGGCa > 2:3393795/1‑93 (MQ=255)
ccACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCaa < 1:823847/93‑1 (MQ=255)
ccACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCaa < 1:2018817/93‑1 (MQ=255)
ccACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCaa < 1:3368212/93‑1 (MQ=255)
ttCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGc > 2:4479177/1‑93 (MQ=255)
ccTGCAAGGCGCCGGTACCGATCATCGAGGCGGGACCCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGAAAAGGCgg < 2:1877412/93‑1 (MQ=255)
tGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCGAGCCGCGCCTCGGCAATGGCGGTc > 2:835386/1‑93 (MQ=255)
tGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTc < 2:4588030/93‑1 (MQ=255)
gAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAc > 1:2226336/1‑93 (MQ=255)
aaGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAcc < 1:1492861/93‑1 (MQ=255)
aGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCa > 2:900771/1‑93 (MQ=255)
aGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCa < 1:2317330/93‑1 (MQ=255)
aGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCa > 1:3062331/1‑93 (MQ=255)
ggCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAg > 2:3003092/1‑93 (MQ=255)
ggCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAg < 1:2398310/93‑1 (MQ=255)
ggCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGGGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCTGCAATTGCGGTCACCAg > 2:4514612/1‑93 (MQ=255)
cGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGt < 2:3465536/93‑1 (MQ=255)
gTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGtt > 2:2669032/1‑93 (MQ=255)
tCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTa < 2:744104/93‑1 (MQ=255)
tCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGCGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTa < 2:3029795/93‑1 (MQ=255)
gcGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTa < 2:2407771/92‑1 (MQ=255)
cGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAg > 2:4154189/1‑93 (MQ=255)
|
CGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGT > NC_000913/3849968‑3850147
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCG > NC_000913/3849965‑3850149
|
CTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTA > SRR4302535.4089731/1‑94 (MQ=60)
TGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGTGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTAC < SRR4302535.4667952/94‑1 (MQ=60)
GCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACC > SRR4302535.1003951/1‑94 (MQ=60)
GGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGA > SRR4302535.818784/1‑94 (MQ=60)
GGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGAT > SRR4302535.2888485/1‑94 (MQ=60)
GGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGAT > SRR4302535.2554517/1‑94 (MQ=60)
GAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATC > SRR4302535.4582264/1‑94 (MQ=60)
AGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCA > SRR4302535.1784743/1‑94 (MQ=60)
AGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCA > SRR4302535.1081595/1‑94 (MQ=60)
AGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCA < SRR4302535.230626/94‑1 (MQ=60)
GTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCAT < SRR4302535.916896/94‑1 (MQ=60)
GTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCAT > SRR4302535.1229048/1‑94 (MQ=60)
GTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCAT > SRR4302535.2174263/1‑94 (MQ=60)
GTTCTTCGATATGTCTGACCAGATAGTTCTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCAT < SRR4302535.4539851/94‑1 (MQ=60)
TCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCG > SRR4302535.1244474/1‑94 (MQ=60)
TCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCG > SRR4302535.3812844/1‑94 (MQ=60)
TCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCG < SRR4302535.1868053/94‑1 (MQ=60)
TCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCG > SRR4302535.2724020/1‑94 (MQ=60)
CTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGA > SRR4302535.4476895/1‑94 (MQ=60)
CTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGA > SRR4302535.549735/1‑94 (MQ=60)
TTCTATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAG < SRR4302535.3769376/94‑1 (MQ=60)
TTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAG < SRR4302535.4217146/94‑1 (MQ=60)
CGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGG > SRR4302535.2599618/1‑94 (MQ=60)
CGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGC < SRR4302535.461162/94‑1 (MQ=60)
CGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGC < SRR4302535.2720850/94‑1 (MQ=60)
GATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCG > SRR4302535.893229/1‑94 (MQ=60)
CATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCCCTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCG < SRR4302535.3745109/94‑1 (MQ=60)
ATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGG > SRR4302535.1664952/1‑94 (MQ=60)
ATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGG > SRR4302535.1305899/1‑94 (MQ=60)
TATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGG < SRR4302535.3946616/94‑1 (MQ=60)
TATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGG > SRR4302535.774120/1‑94 (MQ=60)
ATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGA > SRR4302535.2440266/1‑94 (MQ=60)
GTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAC < SRR4302535.3553692/94‑1 (MQ=60)
GTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAC < SRR4302535.4697776/94‑1 (MQ=60)
CTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCT < SRR4302535.2812101/94‑1 (MQ=60)
TGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTG > SRR4302535.2212952/1‑94 (MQ=60)
TGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTG > SRR4302535.945223/1‑94 (MQ=60)
ACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAC > SRR4302535.3285244/1‑94 (MQ=60)
CCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACC < SRR4302535.673441/94‑1 (MQ=60)
CCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACC > SRR4302535.440809/1‑94 (MQ=60)
CCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTCTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACC > SRR4302535.2532227/1‑94 (MQ=60)
CAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGCCCA > SRR4302535.1166382/1‑94 (MQ=60)
CAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCA < SRR4302535.670625/94‑1 (MQ=60)
CAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCA > SRR4302535.4707742/1‑94 (MQ=60)
CAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCA > SRR4302535.1141172/1‑94 (MQ=60)
AGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAG < SRR4302535.2185581/94‑1 (MQ=60)
AGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAG > SRR4302535.1228009/1‑94 (MQ=60)
AGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAG > SRR4302535.3159943/1‑94 (MQ=60)
AGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACAAG > SRR4302535.3204705/1‑94 (MQ=60)
GATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGCACCTGACCAGG > SRR4302535.276533/1‑94 (MQ=60)
ATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTG < SRR4302535.1269733/94‑1 (MQ=60)
AGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAT > SRR4302535.616124/1‑94 (MQ=60)
AGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAT > SRR4302535.1110752/1‑94 (MQ=60)
AGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAT < SRR4302535.1493398/94‑1 (MQ=60)
AGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAT < SRR4302535.4586343/94‑1 (MQ=60)
AGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAACTGACCAGTGAT > SRR4302535.1892930/1‑94 (MQ=60)
GTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATG > SRR4302535.4047373/1‑94 (MQ=60)
GTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATG > SRR4302535.3568937/1‑94 (MQ=60)
TTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGC > SRR4302535.3045258/1‑94 (MQ=60)
GTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAA > SRR4302535.3582459/1‑94 (MQ=60)
GTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAGGCAA > SRR4302535.1310763/1‑94 (MQ=60)
TGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAA > SRR4302535.3564826/1‑94 (MQ=60)
GTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAAT > SRR4302535.2890998/1‑94 (MQ=60)
GTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAAT < SRR4302535.4545897/94‑1 (MQ=60)
GTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAAT > SRR4302535.4605404/1‑94 (MQ=60)
TTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCA < SRR4302535.3815023/94‑1 (MQ=60)
TTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCA < SRR4302535.2598977/94‑1 (MQ=60)
TTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCA < SRR4302535.4380289/94‑1 (MQ=60)
TTGGGGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCA < SRR4302535.252432/94‑1 (MQ=60)
TGGTGATGGGGATAGAGATGCCGCAGGTGTCCACTTCCTGGAAGGCGTCGGGACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAG > SRR4302535.3690561/1‑94 (MQ=60)
GTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCG < SRR4302535.2342621/94‑1 (MQ=60)
TGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGG > SRR4302535.1968789/1‑94 (MQ=60)
ATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTAACGATCATCGAGGCGGGAACCTGACCAGTGATGCACATCAGCGGGA > SRR4302535.2029280/1‑94 (MQ=60)
TGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAT < SRR4302535.1325251/94‑1 (MQ=60)
TGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAT < SRR4302535.4439211/94‑1 (MQ=60)
TGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAT < SRR4302535.2499321/94‑1 (MQ=60)
GGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATG < SRR4302535.4243266/94‑1 (MQ=60)
GGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATG < SRR4302535.3428136/94‑1 (MQ=60)
GATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAG > SRR4302535.126914/1‑94 (MQ=60)
GATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAG < SRR4302535.3845011/94‑1 (MQ=60)
GATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAG < SRR4302535.3565851/94‑1 (MQ=60)
ATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGT < SRR4302535.1218147/94‑1 (MQ=60)
ATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGT < SRR4302535.3326191/94‑1 (MQ=60)
ATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGT > SRR4302535.192250/1‑94 (MQ=60)
ATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGC > SRR4302535.3901984/1‑94 (MQ=60)
TAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTC < SRR4302535.4665211/94‑1 (MQ=60)
TAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTC > SRR4302535.3366469/1‑94 (MQ=60)
GAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCA < SRR4302535.3342905/94‑1 (MQ=60)
AGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAG < SRR4302535.1081678/94‑1 (MQ=60)
AGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAG < SRR4302535.3160143/94‑1 (MQ=60)
AGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAG > SRR4302535.2962804/1‑94 (MQ=60)
GATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGC < SRR4302535.3697595/94‑1 (MQ=60)
GATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGC < SRR4302535.3043773/94‑1 (MQ=60)
ATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACAAGCAATGCAAATCACCGGGATGGAGTCCTGCC > SRR4302535.2971219/1‑94 (MQ=60)
TGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCG < SRR4302535.1203124/94‑1 (MQ=60)
TGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCG < SRR4302535.1680931/94‑1 (MQ=60)
CCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCG < SRR4302535.4517685/94‑1 (MQ=60)
CGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATTGAGGCGGGAACCTGACCAGAGATGCAAATCAGCGGGATGGAGTCCAGGCGCGC > SRR4302535.3452680/1‑94 (MQ=60)
CGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGC > SRR4302535.3657017/1‑94 (MQ=60)
CGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGA > SRR4302535.4666296/1‑94 (MQ=60)
GTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCA > SRR4302535.3702366/1‑94 (MQ=60)
AGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATC > SRR4302535.3051572/1‑94 (MQ=60)
GGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCG > SRR4302535.1795930/1‑94 (MQ=60)
TGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGC < SRR4302535.2475005/94‑1 (MQ=60)
TGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGC > SRR4302535.796945/1‑94 (MQ=60)
CCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAAT < SRR4302535.3391648/94‑1 (MQ=60)
CCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAAT > SRR4302535.2195724/1‑94 (MQ=60)
CCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAAT < SRR4302535.829621/94‑1 (MQ=60)
CCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAAT < SRR4302535.2033367/94‑1 (MQ=60)
CACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATG < SRR4302535.2931887/94‑1 (MQ=60)
CTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC < SRR4302535.3931494/94‑1 (MQ=60)
CTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC < SRR4302535.3392065/94‑1 (MQ=60)
TTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCG > SRR4302535.2871216/1‑94 (MQ=60)
CTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTC < SRR4302535.3173152/94‑1 (MQ=60)
GGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAC > SRR4302535.2242176/1‑94 (MQ=60)
GGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAC > SRR4302535.2341829/1‑94 (MQ=60)
GAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACC < SRR4302535.4562797/94‑1 (MQ=60)
AAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCA > SRR4302535.3083743/1‑94 (MQ=60)
AAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCA < SRR4302535.1503584/94‑1 (MQ=60)
AGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCTGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAG < SRR4302535.3325511/94‑1 (MQ=60)
AGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAG < SRR4302535.2333914/94‑1 (MQ=60)
GGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGG < SRR4302535.2415554/94‑1 (MQ=60)
GCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGT < SRR4302535.87032/94‑1 (MQ=60)
CGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTT < SRR4302535.1000834/94‑1 (MQ=60)
CGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTT < SRR4302535.2001765/94‑1 (MQ=60)
GTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTA < SRR4302535.1474020/94‑1 (MQ=60)
TCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAG > SRR4302535.978632/1‑94 (MQ=60)
CGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGT > SRR4302535.4272735/1‑94 (MQ=60)
CGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGT < SRR4302535.3715899/94‑1 (MQ=60)
GGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTC < SRR4302535.1945465/94‑1 (MQ=60)
GGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTC > SRR4302535.1352724/1‑94 (MQ=60)
GTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCG > SRR4302535.2622855/1‑94 (MQ=60)
GTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCG < SRR4302535.2188546/94‑1 (MQ=60)
GTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCG > SRR4302535.2119306/1‑94 (MQ=60)
|
CTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCG > NC_000913/3849965‑3850149
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
