Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,851,411	A→G	intergenic (‑796/‑132)	ivbL ← / → emrD	ilvB operon leader peptide/2‑module integral membrane pump

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,851,411	0	A	G	99.8%	1469.6 / ‑5.2	455	intergenic (‑796/‑132)	ivbL/emrD	ilvB operon leader peptide/2‑module integral membrane pump
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (180/273); total (181/274)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.54e-01

Only 100 of 471 total aligned reads displayed.

TTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG  >  NC_000913/3851321‑3851500

tttAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCa                                                                                         >  2:5420845/1‑93 (MQ=255)

  tAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGGCGCTTTTGTTTGCata                                                                                       <  2:3110047/93‑1 (MQ=255)

  tAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCata                                                                                       <  2:2260698/93‑1 (MQ=255)

     cGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTc                                                                                    <  1:3812369/93‑1 (MQ=255)

     cGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTc                                                                                    <  2:7222936/93‑1 (MQ=255)

     cGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTc                                                                                    <  2:1661997/93‑1 (MQ=255)

      gTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCt                                                                                   <  2:146209/93‑1 (MQ=255)

       tGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTg                                                                                  >  1:4248490/1‑93 (MQ=255)

        gCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGc                                                                                 <  2:7094932/93‑1 (MQ=255)

        gCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGc                                                                                 <  1:4454363/93‑1 (MQ=255)

         cGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGcc                                                                                <  1:3344319/93‑1 (MQ=255)

          gggTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCg                                                                               >  1:1335438/1‑93 (MQ=255)

           ggTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGc                                                                              <  2:1079828/93‑1 (MQ=255)

           ggTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGc                                                                              >  2:3803237/1‑93 (MQ=255)

             ttGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTa                                                                            <  2:2524324/93‑1 (MQ=255)

               ggTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTGTTGCCGCTTTTGTTTGCATATTCTGCCGCTaaa                                                                          >  2:1881280/1‑93 (MQ=255)

                  gtCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACaa                                                                       <  2:7555093/93‑1 (MQ=255)

                   tCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAAt                                                                      <  1:727077/93‑1 (MQ=255)

                     ggATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTc                                                                    <  1:1029334/93‑1 (MQ=255)

                      gatgcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTcc                                                                   >  1:5307150/1‑93 (MQ=255)

                      gatgcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTcc                                                                   >  2:4195593/1‑93 (MQ=255)

                       atgcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAAc                                                                         <  1:3506575/86‑1 (MQ=255)

                       atgcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTccc                                                                  <  2:58963/93‑1 (MQ=255)

                         gcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCa                                                                <  1:861200/93‑1 (MQ=255)

                           gatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCGtt                                                              >  2:332716/1‑93 (MQ=255)

                            atgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTc                                                             <  1:2229623/93‑1 (MQ=255)

                             tgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTcc                                                            >  1:3567185/1‑93 (MQ=255)

                                 gACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGc                                                        >  2:5206311/1‑93 (MQ=255)

                                 gACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGc                                                        >  2:3192927/1‑93 (MQ=255)

                                    gCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGta                                                     >  2:5283764/1‑93 (MQ=255)

                                    gCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGta                                                     <  2:5929050/93‑1 (MQ=255)

                                    ccATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGta                                                     <  1:5232719/92‑1 (MQ=255)

                                     cATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGtat                                                    >  1:5589557/1‑93 (MQ=255)

                                     cATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGtat                                                    >  2:5600427/1‑93 (MQ=255)

                                      aTCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGtata                                                   >  1:1557526/1‑93 (MQ=255)

                                       tCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTatat                                                  >  1:2050564/1‑93 (MQ=255)

                                       tCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTatat                                                  <  1:5794611/93‑1 (MQ=255)

                                       tCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCACCATTCCTGGCGTatat                                                  >  1:7680134/1‑93 (MQ=255)

                                        cTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATc                                                 <  1:2715566/93‑1 (MQ=255)

                                         ttATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCt                                                <  1:6467118/93‑1 (MQ=255)

                                         ttATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCt                                                >  1:39428/1‑93 (MQ=255)

                                         ttATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCt                                                <  2:4396610/93‑1 (MQ=255)

                                          tATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTg                                               <  1:1086134/93‑1 (MQ=255)

                                          tATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTg                                               >  1:4621304/1‑93 (MQ=255)

                                                 ccTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTAGCGTATATCTGGCTAACa                                        <  2:833958/93‑1 (MQ=255)

                                                  cTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAt                                       >  1:7483561/1‑93 (MQ=255)

                                                  cTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAt                                       >  2:5453693/1‑93 (MQ=255)

                                                  cTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAt                                       >  1:6189611/1‑93 (MQ=255)

                                                  cTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAt                                       <  1:734635/93‑1 (MQ=255)

                                                   tACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGACTAACAtt                                      <  1:1855299/93‑1 (MQ=255)

                                                    aCCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtc                                     <  1:2780533/93‑1 (MQ=255)

                                                     ccATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtca                                    <  1:7794135/93‑1 (MQ=255)

                                                      cATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcat                                   >  1:894872/1‑93 (MQ=255)

                                                      cATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcat                                   <  2:6215845/93‑1 (MQ=255)

                                                      cATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcat                                   >  2:2776513/1‑93 (MQ=255)

                                                       aTCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcatc                                  >  1:6980705/1‑93 (MQ=255)

                                                       aTCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcatc                                  <  2:5723811/93‑1 (MQ=255)

                                                        tctctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcatca                                 >  1:6320316/1‑93 (MQ=255)

                                                          tctcCCGGCAACATTTATTGCTGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAt                               >  2:2104142/1‑93 (MQ=255)

                                                          tctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAt                               <  2:7441248/93‑1 (MQ=255)

                                                          tctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAt                               <  2:4975951/93‑1 (MQ=255)

                                                          tctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAt                               >  2:4639591/1‑93 (MQ=255)

                                                           ctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAtg                              <  2:6085497/93‑1 (MQ=255)

                                                            tcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAtgt                             <  1:4368404/93‑1 (MQ=255)

                                                            tcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAtgt                             <  1:4895848/93‑1 (MQ=255)

                                                                ggCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATa                         <  2:1980467/93‑1 (MQ=255)

                                                                ggCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATa                         <  2:3718571/93‑1 (MQ=255)

                                                                 gCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAg                        >  2:4038699/1‑93 (MQ=255)

                                                                  cAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGa                       <  1:6635130/93‑1 (MQ=255)

                                                                   aaCATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAt                      <  1:7111277/93‑1 (MQ=255)

                                                                   aaCATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAt                      <  2:5121810/93‑1 (MQ=255)

                                                                   aaCATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAt                      <  2:3527048/93‑1 (MQ=255)

                                                                   aaCATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAt                      <  1:5418983/93‑1 (MQ=255)

                                                                     cATTTATTTCCGCTTTTGCTTGCCTATTCTGATGCTAAACAATTTCCCATTCCTGTCGTATATCTGGCTAACATTCATCACTGTGATAGATTc                    >  2:4779271/1‑93 (MQ=255)

                                                                      aTTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTcc                   <  1:7222074/93‑1 (MQ=255)

                                                                       tttATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCct                  <  1:3005854/93‑1 (MQ=255)

                                                                       tttATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCct                  >  1:3693152/1‑93 (MQ=255)

                                                                        ttATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCctc                 <  1:1215517/93‑1 (MQ=255)

                                                                        ttATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCctc                 <  2:6789773/93‑1 (MQ=255)

                                                                        ttATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCctc                 <  2:2647306/93‑1 (MQ=255)

                                                                          aTTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCtctc               >  1:668689/1‑93 (MQ=255)

                                                                          aTTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCtctc               <  2:153062/93‑1 (MQ=255)

                                                                           ttGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTcc              <  1:4935947/93‑1 (MQ=255)

                                                                           ttGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTcc              <  2:1267151/93‑1 (MQ=255)

                                                                             gCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCg            >  2:6913475/1‑93 (MQ=255)

                                                                               cGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCa          >  1:3262680/1‑93 (MQ=255)

                                                                               cGCTTTTGTTGCCATGTTCTGCCGCTAATCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCa          <  2:137120/93‑1 (MQ=255)

                                                                                gCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAt         >  1:5919228/1‑93 (MQ=255)

                                                                                gCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAt         >  1:7913121/1‑93 (MQ=255)

                                                                                gCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAt         >  2:6523919/1‑93 (MQ=255)

                                                                                 cTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATCGATTCCTCTCCCGCAtt        >  2:2944668/1‑93 (MQ=255)

                                                                                  ttttGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAttt       >  2:1184059/1‑93 (MQ=255)

                                                                                  ttttGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAttt       >  2:7656591/1‑93 (MQ=255)

                                                                                  ttttGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAttt       >  2:3917920/1‑93 (MQ=255)

                                                                                   tttgtttgCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTa      <  1:5485156/93‑1 (MQ=255)

                                                                                    ttGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAt     <  1:234235/93‑1 (MQ=255)

                                                                                    ttGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAt     <  1:6080639/93‑1 (MQ=255)

                                                                                     tGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATg    <  2:7782544/93‑1 (MQ=255)

                                                                                      gTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATgg   <  1:250538/93‑1 (MQ=255)

                                                                                      gTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATgg   <  2:3421673/93‑1 (MQ=255)

TTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG  >  NC_000913/3851321‑3851500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 253 total aligned reads displayed.

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  >  NC_000913/3851318‑3851504

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTG                                                                                               <  SRR4302543.7469149/94‑1 (MQ=60)

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTG                                                                                               <  SRR4302543.5884217/94‑1 (MQ=60)

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTG                                                                                               <  SRR4302543.1212429/94‑1 (MQ=60)

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTG                                                                                               <  SRR4302543.6478567/94‑1 (MQ=60)

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTG                                                                                               >  SRR4302543.4511629/1‑94 (MQ=60)

  ATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCA                                                                                             >  SRR4302543.2183365/1‑94 (MQ=60)

  ATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCA                                                                                             >  SRR4302543.5510470/1‑94 (MQ=60)

  ATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCA                                                                                             >  SRR4302543.479282/1‑94 (MQ=60)

  ATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCA                                                                                             >  SRR4302543.6020767/1‑94 (MQ=60)

   TTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCAT                                                                                            <  SRR4302543.509428/94‑1 (MQ=60)

    TTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATA                                                                                           <  SRR4302543.6609708/94‑1 (MQ=60)

    TTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATA                                                                                           >  SRR4302543.2484544/1‑94 (MQ=60)

     TAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATAT                                                                                          <  SRR4302543.791465/94‑1 (MQ=60)

     TAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATAT                                                                                          <  SRR4302543.1249288/94‑1 (MQ=60)

     TAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATAT                                                                                          <  SRR4302543.7873065/94‑1 (MQ=60)

      AGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATT                                                                                         <  SRR4302543.4478197/94‑1 (MQ=60)

      AGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATT                                                                                         <  SRR4302543.6947587/94‑1 (MQ=60)

        CGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCT                                                                                       <  SRR4302543.3845975/94‑1 (MQ=60)

        CGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCT                                                                                       <  SRR4302543.5730720/94‑1 (MQ=60)

        CGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCT                                                                                       <  SRR4302543.232057/94‑1 (MQ=60)

        CGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCT                                                                                       >  SRR4302543.4941227/1‑94 (MQ=60)

        CGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCT                                                                                       <  SRR4302543.2801480/94‑1 (MQ=60)

         GTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTG                                                                                      >  SRR4302543.4287046/1‑94 (MQ=60)

         GTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTG                                                                                      >  SRR4302543.1909801/1‑94 (MQ=60)

           GCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCC                                                                                    <  SRR4302543.4494708/94‑1 (MQ=60)

            CGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCG                                                                                   <  SRR4302543.3374431/94‑1 (MQ=60)

            CGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCG                                                                                   <  SRR4302543.2964468/94‑1 (MQ=60)

            CGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCG                                                                                   >  SRR4302543.1347347/1‑94 (MQ=60)

             GGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGC                                                                                  <  SRR4302543.6421038/94‑1 (MQ=60)

               GTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTA                                                                                >  SRR4302543.5519743/1‑94 (MQ=60)

               GTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTA                                                                                <  SRR4302543.6188782/94‑1 (MQ=60)

                 TGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAA                                                                              <  SRR4302543.5313537/94‑1 (MQ=60)

                 TGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAA                                                                              <  SRR4302543.7459466/94‑1 (MQ=60)

                 TGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAA                                                                              >  SRR4302543.5600310/1‑94 (MQ=60)

                   cactctGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACA                                                                            <  SRR4302543.3537921/88‑1 (MQ=60)

                   GTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACA                                                                            >  SRR4302543.564093/1‑94 (MQ=60)

                    TGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAA                                                                           <  SRR4302543.709716/94‑1 (MQ=60)

                     GTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAAT                                                                          <  SRR4302543.6273822/94‑1 (MQ=60)

                     GTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAAT                                                                          >  SRR4302543.3089003/1‑94 (MQ=60)

                      TCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATT                                                                         <  SRR4302543.733614/94‑1 (MQ=60)

                       CGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTC                                                                        <  SRR4302543.2799347/94‑1 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATCTTCTGCCGCTAAACAATTCC                                                                       >  SRR4302543.2469630/1‑94 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       >  SRR4302543.3338416/1‑94 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       <  SRR4302543.1038459/94‑1 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       <  SRR4302543.62329/94‑1 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       <  SRR4302543.4804118/94‑1 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       >  SRR4302543.5355076/1‑94 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       <  SRR4302543.2338106/94‑1 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       <  SRR4302543.1321700/94‑1 (MQ=60)

                         GATGCGATGCTGACGCATCTTATCCGCCCTCCCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCC                                                                      <  SRR4302543.535984/94‑1 (MQ=60)

                         GATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCC                                                                      <  SRR4302543.5864634/94‑1 (MQ=60)

                         GATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCC                                                                      <  SRR4302543.7209306/94‑1 (MQ=60)

                         GATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCC                                                                      <  SRR4302543.7285830/94‑1 (MQ=60)

                          ATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCC                                                                     >  SRR4302543.818350/1‑94 (MQ=60)

                          ATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCC                                                                     >  SRR4302543.1860953/1‑94 (MQ=60)

                            GCGATGNTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCAT                                                                   <  SRR4302543.330082/94‑1 (MQ=60)

                            GCGATGCTGACGCATCTTATCCGTCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCAT                                                                   <  SRR4302543.854262/94‑1 (MQ=60)

                            GCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCAT                                                                   <  SRR4302543.868876/94‑1 (MQ=60)

                            GCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCAT                                                                   <  SRR4302543.868877/94‑1 (MQ=60)

                             CGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATT                                                                  >  SRR4302543.3590423/1‑94 (MQ=60)

                              GATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTC                                                                 >  SRR4302543.1244476/1‑94 (MQ=60)

                               ATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCC                                                                <  SRR4302543.2249760/94‑1 (MQ=60)

                               ATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCC                                                                >  SRR4302543.3598736/1‑94 (MQ=60)

                                TGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCT                                                               >  SRR4302543.3149883/1‑94 (MQ=60)

                                  CTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGG                                                             >  SRR4302543.4066639/1‑94 (MQ=60)

                                  CTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGG                                                             <  SRR4302543.2679039/94‑1 (MQ=60)

                                      CGCATCTTATCCGCTCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTA                                                         <  SRR4302543.3566513/94‑1 (MQ=60)

                                      CGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTA                                                         >  SRR4302543.5290031/1‑94 (MQ=60)

                                      CGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTA                                                         >  SRR4302543.5865301/1‑94 (MQ=60)

                                       GCATCTTATCCGCCCTACCATCTCTCCCGGCATCATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTAT                                                        <  SRR4302543.1076607/94‑1 (MQ=60)

                                       GCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTAT                                                        <  SRR4302543.3234432/94‑1 (MQ=60)

                                       GCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTAT                                                        >  SRR4302543.5640473/1‑94 (MQ=60)

                                       GCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTAT                                                        >  SRR4302543.6981882/1‑94 (MQ=60)

                                       CCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTAT                                                        <  SRR4302543.5279861/94‑1 (MQ=60)

                                        CATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATA                                                       >  SRR4302543.1571445/1‑94 (MQ=60)

                                         ATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATAT                                                      >  SRR4302543.2068927/1‑94 (MQ=60)

                                         ATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATAT                                                      >  SRR4302543.2268584/1‑94 (MQ=60)

                                         ATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATAT                                                      <  SRR4302543.287923/94‑1 (MQ=60)

                                         ATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATAT                                                      <  SRR4302543.5261554/94‑1 (MQ=60)

                                         ATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATAT                                                      >  SRR4302543.1931422/1‑94 (MQ=60)

                                         ATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATAT                                                      >  SRR4302543.6733742/1‑94 (MQ=60)

                                          TCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATC                                                     <  SRR4302543.5847330/94‑1 (MQ=60)

                                          TCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATC                                                     <  SRR4302543.7535214/94‑1 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    >  SRR4302543.1059596/1‑94 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    <  SRR4302543.2740242/94‑1 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    <  SRR4302543.7332151/94‑1 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    >  SRR4302543.39793/1‑94 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    <  SRR4302543.7746033/94‑1 (MQ=60)

                                            TTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTG                                                   <  SRR4302543.7808725/94‑1 (MQ=60)

                                            TTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTG                                                   <  SRR4302543.5502138/94‑1 (MQ=60)

                                            TTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTG                                                   <  SRR4302543.6528048/94‑1 (MQ=60)

                                             TATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGG                                                  <  SRR4302543.1095895/94‑1 (MQ=60)

                                              ATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGC                                                 >  SRR4302543.824097/1‑94 (MQ=60)

                                              ATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGC                                                 <  SRR4302543.7745828/94‑1 (MQ=60)

                                                  GCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAAC                                             <  SRR4302543.4128315/94‑1 (MQ=60)

                                                  GCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAAC                                             >  SRR4302543.4757636/1‑94 (MQ=60)

                                                    CCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAT                                           >  SRR4302543.6248091/1‑94 (MQ=60)

                                                     CTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATT                                          <  SRR4302543.741214/94‑1 (MQ=60)

                                                     CTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATT                                          >  SRR4302543.3648055/1‑94 (MQ=60)

                                                     CTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATT                                          <  SRR4302543.6179326/94‑1 (MQ=60)

                                                     CTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATT                                          <  SRR4302543.3614297/94‑1 (MQ=60)

                                                      TACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTC                                         >  SRR4302543.5577961/1‑94 (MQ=60)

                                                      TACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGACTAACATTC                                         <  SRR4302543.1871981/94‑1 (MQ=60)

                                                       ACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCA                                        <  SRR4302543.2805872/94‑1 (MQ=60)

                                                       ACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCA                                        >  SRR4302543.7380469/1‑94 (MQ=60)

                                                       ACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCA                                        <  SRR4302543.7096940/94‑1 (MQ=60)

                                                        CCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCAT                                       >  SRR4302543.902779/1‑94 (MQ=60)

                                                        CCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCAT                                       <  SRR4302543.7867588/94‑1 (MQ=60)

                                                         CATCTCTCCCGTCAACATTGATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATC                                      <  SRR4302543.1114932/94‑1 (MQ=60)

                                                         CATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATC                                      <  SRR4302543.3894190/94‑1 (MQ=60)

                                                         CATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATC                                      <  SRR4302543.1114933/94‑1 (MQ=60)

                                                         CATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATC                                      <  SRR4302543.5009167/94‑1 (MQ=60)

                                                         CATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATC                                      <  SRR4302543.4722645/94‑1 (MQ=60)

                                                         CATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTCGCTAACATTCATC                                      >  SRR4302543.4502926/1‑94 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     <  SRR4302543.3375675/94‑1 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     >  SRR4302543.6379751/1‑94 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     >  SRR4302543.453464/1‑94 (MQ=60)

                                                            CTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAT                                   >  SRR4302543.223756/1‑94 (MQ=60)

                                                            CTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAT                                   <  SRR4302543.648335/94‑1 (MQ=60)

                                                            CTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAT                                   <  SRR4302543.537862/94‑1 (MQ=60)

                                                             TCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATG                                  <  SRR4302543.5420274/94‑1 (MQ=60)

                                                              CTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGT                                 >  SRR4302543.434759/1‑94 (MQ=60)

                                                              CTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGT                                 <  SRR4302543.1096494/94‑1 (MQ=60)

                                                              CTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGT                                 >  SRR4302543.7303629/1‑94 (MQ=60)

                                                               TCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTG                                <  SRR4302543.4940476/94‑1 (MQ=60)

                                                               TCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTG                                <  SRR4302543.7897652/94‑1 (MQ=60)

                                                               TCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTG                                <  SRR4302543.4407972/94‑1 (MQ=60)

                                                               TCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTG                                <  SRR4302543.3417671/94‑1 (MQ=60)

                                                                 CCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGAT                              >  SRR4302543.4437447/1‑94 (MQ=60)

                                                                 CCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGAT                              <  SRR4302543.3669512/94‑1 (MQ=60)

                                                                  CGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATA                             <  SRR4302543.1533586/94‑1 (MQ=60)

                                                                  CGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATA                             >  SRR4302543.938024/1‑94 (MQ=60)

                                                                   GGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAG                            <  SRR4302543.3806792/94‑1 (MQ=60)

                                                                   GGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAG                            <  SRR4302543.6914380/94‑1 (MQ=60)

                                                                   GGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAG                            <  SRR4302543.348205/94‑1 (MQ=60)

                                                                   GGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAG                            <  SRR4302543.7787408/94‑1 (MQ=60)

                                                                    GCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGA                           <  SRR4302543.5631070/94‑1 (MQ=60)

                                                                    GCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGA                           >  SRR4302543.798812/1‑94 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          >  SRR4302543.1924771/1‑94 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          <  SRR4302543.7656321/94‑1 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          <  SRR4302543.882506/94‑1 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          <  SRR4302543.6697739/94‑1 (MQ=60)

                                                                      AACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATT                         >  SRR4302543.737920/1‑94 (MQ=60)

                                                                      AACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATT                         <  SRR4302543.7180360/94‑1 (MQ=60)

                                                                      AACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATT                         <  SRR4302543.7455757/94‑1 (MQ=60)

                                                                       ACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTC                        >  SRR4302543.2949905/1‑94 (MQ=60)

                                                                       ACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTC                        <  SRR4302543.6607321/94‑1 (MQ=60)

                                                                         ATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCT                      <  SRR4302543.5288616/94‑1 (MQ=60)

                                                                         ATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCT                      <  SRR4302543.7292062/94‑1 (MQ=60)

                                                                         ATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCT                      >  SRR4302543.3725615/1‑94 (MQ=60)

                                                                         ATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCT                      >  SRR4302543.2658316/1‑94 (MQ=60)

                                                                         ATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCT                      <  SRR4302543.1464528/94‑1 (MQ=60)

                                                                          TTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACGATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTC                     <  SRR4302543.2679426/94‑1 (MQ=60)

                                                                          TTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTC                     <  SRR4302543.7382372/94‑1 (MQ=60)

                                                                          TTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTC                     <  SRR4302543.3033087/94‑1 (MQ=60)

                                                                          TTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTC                     <  SRR4302543.6507418/94‑1 (MQ=60)

                                                                           TTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCT                    <  SRR4302543.1226435/94‑1 (MQ=60)

                                                                           TTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCT                    <  SRR4302543.3823675/94‑1 (MQ=60)

                                                                            TATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTC                   >  SRR4302543.674851/1‑94 (MQ=60)

                                                                            TATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTC                   <  SRR4302543.6324162/94‑1 (MQ=60)

                                                                            TATTGCCGCTTTTGTTTCCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTC                   >  SRR4302543.2377053/1‑94 (MQ=60)

                                                                             ATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCC                  >  SRR4302543.3851653/1‑94 (MQ=60)

                                                                             ATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCC                  >  SRR4302543.3851654/1‑94 (MQ=60)

                                                                              TTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCC                 <  SRR4302543.7065378/94‑1 (MQ=60)

                                                                              TTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCC                 <  SRR4302543.5987321/94‑1 (MQ=60)

                                                                              TTGCCGCTTTTGTTCGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCC                 <  SRR4302543.4980898/94‑1 (MQ=60)

                                                                               TGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCG                <  SRR4302543.3359793/94‑1 (MQ=60)

                                                                                GCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGC               <  SRR4302543.695257/94‑1 (MQ=60)

                                                                                 CCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCA              >  SRR4302543.407082/1‑94 (MQ=60)

                                                                                  CGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAT             >  SRR4302543.7196401/1‑94 (MQ=60)

                                                                                  CGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAT             >  SRR4302543.4364818/1‑94 (MQ=60)

                                                                                  CGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAT             >  SRR4302543.7987464/1‑94 (MQ=60)

                                                                                  CGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAT             >  SRR4302543.5973298/1‑94 (MQ=60)

                                                                                  CGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAT             >  SRR4302543.5973297/1‑94 (MQ=60)

                                                                                   GCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATT            >  SRR4302543.4428265/1‑94 (MQ=60)

                                                                                     TTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTA          >  SRR4302543.3583837/1‑94 (MQ=60)

                                                                                     TTTTGTTTGCATATTCTGCCGCCAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTA          >  SRR4302543.1667547/1‑94 (MQ=60)

                                                                                      TTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAT         <  SRR4302543.1763216/94‑1 (MQ=60)

                                                                                      TTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAT         <  SRR4302543.5534879/94‑1 (MQ=60)

                                                                                       TTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATG        <  SRR4302543.236258/94‑1 (MQ=60)

                                                                                       TTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATG        <  SRR4302543.6138258/94‑1 (MQ=60)

                                                                                        TGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGG       <  SRR4302543.6573785/94‑1 (MQ=60)

                                                                                         GTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG      <  SRR4302543.1007711/94‑1 (MQ=60)

                                                                                         GTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG      <  SRR4302543.5655765/94‑1 (MQ=60)

                                                                                         GTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG      <  SRR4302543.7834810/94‑1 (MQ=60)

                                                                                         GTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG      <  SRR4302543.6738581/94‑1 (MQ=60)

                                                                                         GTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG      <  SRR4302543.465327/94‑1 (MQ=60)

                                                                                         GTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG      <  SRR4302543.252719/94‑1 (MQ=60)

                                                                                           TTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGCA    >  SRR4302543.6256190/1‑94 (MQ=60)

                                                                                           TTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAA    >  SRR4302543.7717137/1‑94 (MQ=60)

                                                                                           TTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAA    >  SRR4302543.7983389/1‑94 (MQ=60)

                                                                                           TTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATACATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAA    <  SRR4302543.2059008/94‑1 (MQ=60)

                                                                                            TGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAAT   <  SRR4302543.4301342/94‑1 (MQ=60)

                                                                                            TGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAAT   <  SRR4302543.4301341/94‑1 (MQ=60)

                                                                                            TGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAAT   <  SRR4302543.3398832/94‑1 (MQ=60)

                                                                                            TGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAAT   >  SRR4302543.2998745/1‑94 (MQ=60)

                                                                                             TCATATTCCGCCGCTAAACAATTCCCCATCCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  <  SRR4302543.5052142/94‑1 (MQ=60)

                                                                                             GCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  <  SRR4302543.6419386/94‑1 (MQ=60)

                                                                                             GCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  >  SRR4302543.1587576/1‑94 (MQ=60)

                                                                                             GCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  >  SRR4302543.4010144/1‑94 (MQ=60)

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  >  NC_000913/3851318‑3851504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`