Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,851,510	T→C	intergenic (‑895/‑33)	ivbL ← / → emrD	ilvB operon leader peptide/2‑module integral membrane pump

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,851,510	0	T	C	99.8%	1300.2 / ‑5.5	409	intergenic (‑895/‑33)	ivbL/emrD	ilvB operon leader peptide/2‑module integral membrane pump
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (183/225); total (183/226)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.02e-01

Only 100 of 414 total aligned reads displayed.

GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG  >  NC_000913/3851420‑3851599

  cGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACt                                                                                       <  1:5090834/93‑1 (MQ=255)

  cGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACt                                                                                       >  1:6277044/1‑93 (MQ=255)

   gCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACtt                                                                                      >  1:6948123/1‑93 (MQ=255)

    cTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTa                                                                                     <  1:2070561/93‑1 (MQ=255)

    cTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTa                                                                                     <  2:3261365/93‑1 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  <  2:6854055/93‑1 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  >  2:6530302/1‑93 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  <  1:4298498/93‑1 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  >  2:1034436/1‑93 (MQ=255)

        aCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCt                                                                                 <  2:118017/93‑1 (MQ=255)

          aaTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTaa                                                                               >  1:3231395/1‑93 (MQ=255)

           aTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAat                                                                              >  2:7696468/1‑93 (MQ=255)

           aTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAat                                                                              <  2:1736753/93‑1 (MQ=255)

            ttCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatt                                                                             >  1:4026719/1‑93 (MQ=255)

             tCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatta                                                                            <  2:2462341/93‑1 (MQ=255)

             tCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatta                                                                            <  1:2242587/93‑1 (MQ=255)

              ccccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAattat                                                                           <  1:5756564/93‑1 (MQ=255)

                    tCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTtat                                                                     >  1:6446411/1‑93 (MQ=255)

                    tCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTtat                                                                     >  1:4113634/1‑93 (MQ=255)

                    tCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTtat                                                                     <  2:4628862/93‑1 (MQ=255)

                       tGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaa                                                                  >  2:1445565/1‑93 (MQ=255)

                       tGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaa                                                                  >  2:54408/1‑93 (MQ=255)

                       tGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaa                                                                  >  2:5280524/1‑93 (MQ=255)

                       cggCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaa                                                                  <  1:278386/92‑1 (MQ=255)

                          cGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGc                                                               >  1:6117267/1‑93 (MQ=255)

                          cGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGc                                                               >  1:7724506/1‑93 (MQ=255)

                           gTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCa                                                              >  2:4383080/1‑93 (MQ=255)

                           gTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCa                                                              >  1:3103710/1‑93 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             >  2:336564/1‑93 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             >  1:783150/1‑93 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             >  1:3705118/1‑93 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             >  2:2094351/1‑93 (MQ=255)

                             atgtCTGGCTAACAATCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATc                                                            <  1:4957893/90‑1 (MQ=255)

                             atatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATc                                                            <  2:867374/93‑1 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTATTTATTTTTATAAAAGCATcc                                                           >  1:1659742/1‑93 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc                                                           >  2:427940/1‑93 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc                                                           <  2:7369719/93‑1 (MQ=255)

                               atCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCg                                                          >  1:1054613/1‑93 (MQ=255)

                                tCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGt                                                         >  1:2671154/1‑93 (MQ=255)

                                    gCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATa                                                     >  1:1442461/1‑93 (MQ=255)

                                    gCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATa                                                     <  2:6087407/93‑1 (MQ=255)

                                      tAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATACAAGCATCCGTGATAAt                                                   >  1:7274028/1‑93 (MQ=255)

                                      tAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAt                                                   >  2:488785/1‑93 (MQ=255)

                                      tAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAt                                                   <  2:6980704/93‑1 (MQ=255)

                                          aTTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAATAGCATCCGTGATAATGaaa                                               <  2:2409673/93‑1 (MQ=255)

                                          aTTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaa                                               <  2:7909077/93‑1 (MQ=255)

                                           ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa                                              <  1:1125932/93‑1 (MQ=255)

                                           ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa                                              <  1:4462934/93‑1 (MQ=255)

                                            tcatcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAg                                             <  1:2170267/93‑1 (MQ=255)

                                            tcatcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAg                                             <  1:197175/93‑1 (MQ=255)

                                             catcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAgg                                            >  1:1913275/1‑93 (MQ=255)

                                              atcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGc                                           <  2:2174707/93‑1 (MQ=255)

                                                caATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaa                                         <  2:7872168/93‑1 (MQ=255)

                                                caATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaa                                         >  1:5272243/1‑93 (MQ=255)

                                                 aaTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaaa                                        >  1:636215/1‑93 (MQ=255)

                                                  aTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAg                                       >  1:1328833/1‑93 (MQ=255)

                                                  aTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAg                                       >  2:1968820/1‑93 (MQ=255)

                                                   tgtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGa                                      >  2:5200280/1‑93 (MQ=255)

                                                   tgtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGa                                      <  2:1844367/93‑1 (MQ=255)

                                                   tgtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGa                                      <  1:7424241/93‑1 (MQ=255)

                                                    gtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaa                                     >  2:7474650/1‑93 (MQ=255)

                                                     tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa                                    <  1:3403111/93‑1 (MQ=255)

                                                     tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa                                    >  1:3854628/1‑93 (MQ=255)

                                                     tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa                                    <  1:1179623/93‑1 (MQ=255)

                                                         aGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTc                                <  2:1536843/93‑1 (MQ=255)

                                                          gATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCa                               >  1:5393317/1‑93 (MQ=255)

                                                           aTTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCaa                              >  2:3534217/1‑93 (MQ=255)

                                                           aTTCCGCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCaa                              <  1:6566384/93‑1 (MQ=255)

                                                            ttCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAt                             <  1:546873/93‑1 (MQ=255)

                                                            ttCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAATCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAt                             <  1:17739/93‑1 (MQ=255)

                                                             gccgctcCCGCATGTAGGGGAATGCGGTCCGACGTATTCTAATTATTTTTATAAAAGCACCCGTTATAATGAAAAGCCAAAGAAACGTCAAtt                            <  1:7094984/89‑1 (MQ=255)

                                                              ccTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAttt                           >  2:5517198/1‑93 (MQ=255)

                                                              ccTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAttt                           >  2:4105272/1‑93 (MQ=255)

                                                               ctctCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGCTAATGAAAAGGCCACGAGACGTCAATTTg                          >  1:2968782/1‑93 (MQ=255)

                                                               ctctCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTg                          >  1:7877439/1‑93 (MQ=255)

                                                                tctcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGt                         <  2:3910646/93‑1 (MQ=255)

                                                                tctcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGt                         >  2:59505/1‑93 (MQ=255)

                                                                 ctcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGtt                        <  2:5719558/93‑1 (MQ=255)

                                                                  tcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTa                       >  2:6631557/1‑93 (MQ=255)

                                                                  tcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTa                       <  1:2763662/93‑1 (MQ=255)

                                                                  tcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTa                       >  2:2740227/1‑93 (MQ=255)

                                                                  tcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTa                       <  2:5871160/93‑1 (MQ=255)

                                                                   cccGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAt                      <  2:6205578/93‑1 (MQ=255)

                                                                   cccGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAt                      >  2:1310489/1‑93 (MQ=255)

                                                                    ccGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAtt                     <  2:7233580/93‑1 (MQ=255)

                                                                     cGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAATAGGCAAAGAAACGTCAATTTGTTATTg                    >  2:2807775/1‑93 (MQ=255)

                                                                      gCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGa                   <  1:4751821/93‑1 (MQ=255)

                                                                       cATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGAt                  >  1:2405740/1‑93 (MQ=255)

                                                                         tttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGt                <  1:4587407/93‑1 (MQ=255)

                                                                         tttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGt                <  2:7644639/93‑1 (MQ=255)

                                                                           tATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTg              <  1:7535715/93‑1 (MQ=255)

                                                                              gggAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTa           <  2:3443676/93‑1 (MQ=255)

                                                                               ggAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTAt          <  2:3693151/93‑1 (MQ=255)

                                                                               ggAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTAt          >  1:4830313/1‑93 (MQ=255)

                                                                                 aaTGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTa        <  2:2352570/93‑1 (MQ=255)

                                                                                  aTGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTAc       <  1:5242866/93‑1 (MQ=255)

                                                                                    gCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTc     >  2:2626352/1‑93 (MQ=255)

                                                                                     cGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCg    <  1:6060497/93‑1 (MQ=255)

                                                                                      gTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGt   >  1:6831555/1‑93 (MQ=255)

                                                                                       tAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTg  >  1:3540048/1‑93 (MQ=255)

GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG  >  NC_000913/3851420‑3851599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 227 total aligned reads displayed.

TCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCCG  >  NC_000913/3851417‑3851603

TCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGC                                                                                               <  SRR4302543.859515/94‑1 (MQ=60)

TCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGC                                                                                               <  SRR4302543.3692461/94‑1 (MQ=60)

TCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGC                                                                                               >  SRR4302543.5705226/1‑94 (MQ=60)

 CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCG                                                                                              <  SRR4302543.5470136/94‑1 (MQ=60)

 CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCG                                                                                              >  SRR4302543.6266996/1‑94 (MQ=60)

 CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCG                                                                                              <  SRR4302543.1332608/94‑1 (MQ=60)

   GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAC                                                                                            <  SRR4302543.1110280/94‑1 (MQ=60)

    CCTCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACT                                                                                           <  SRR4302543.7282362/94‑1 (MQ=60)

    CCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACT                                                                                           >  SRR4302543.6336218/1‑94 (MQ=60)

    CCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACT                                                                                           >  SRR4302543.4264814/1‑94 (MQ=60)

    CCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACT                                                                                           <  SRR4302543.2056253/94‑1 (MQ=60)

    CCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACT                                                                                           >  SRR4302543.207566/1‑94 (MQ=60)

    CCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACT                                                                                           <  SRR4302543.7837815/94‑1 (MQ=60)

     CGCTGAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTT                                                                                          <  SRR4302543.7552485/94‑1 (MQ=60)

     CGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTT                                                                                          <  SRR4302543.7552484/94‑1 (MQ=60)

      GCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTA                                                                                         >  SRR4302543.753091/1‑94 (MQ=60)

       CTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAT                                                                                        <  SRR4302543.2089061/94‑1 (MQ=60)

       CTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAT                                                                                        <  SRR4302543.2796118/94‑1 (MQ=60)

       CTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAT                                                                                        <  SRR4302543.193870/94‑1 (MQ=60)

       CTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAT                                                                                        <  SRR4302543.1912932/94‑1 (MQ=60)

        TAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATT                                                                                       <  SRR4302543.725477/94‑1 (MQ=60)

        TAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCANTTNNNGGNATGCGTANNGNCNTNTT                                                                                       >  SRR4302543.873886/1‑94 (MQ=60)

         AAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTC                                                                                      <  SRR4302543.1153934/94‑1 (MQ=60)

         AAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTC                                                                                      <  SRR4302543.4138247/94‑1 (MQ=60)

          AACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCT                                                                                     <  SRR4302543.4339065/94‑1 (MQ=60)

          AACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCT                                                                                     <  SRR4302543.4337559/94‑1 (MQ=60)

          AACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCT                                                                                     <  SRR4302543.6237427/94‑1 (MQ=60)

           ACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTA                                                                                    >  SRR4302543.6925479/1‑94 (MQ=60)

           ACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTA                                                                                    >  SRR4302543.7824190/1‑94 (MQ=60)

            CAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAA                                                                                   >  SRR4302543.3260616/1‑94 (MQ=60)

             AATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAAT                                                                                  <  SRR4302543.4216945/94‑1 (MQ=60)

             AATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAAT                                                                                  <  SRR4302543.2458716/94‑1 (MQ=60)

             AATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAAT                                                                                  <  SRR4302543.1898185/94‑1 (MQ=60)

              ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 <  SRR4302543.7649940/94‑1 (MQ=60)

              ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 >  SRR4302543.4062707/1‑94 (MQ=60)

              ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 >  SRR4302543.1944544/1‑94 (MQ=60)

              ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 <  SRR4302543.2223962/94‑1 (MQ=60)

               TTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTA                                                                                >  SRR4302543.7001431/1‑94 (MQ=60)

                TCCCCATTCCTGGCGTATATCTGGCTAACATTCGTCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT                                                                               <  SRR4302543.7715677/94‑1 (MQ=60)

                TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTGGTGACTTATTCTAATTAT                                                                               <  SRR4302543.6119891/94‑1 (MQ=60)

                TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT                                                                               <  SRR4302543.5397169/94‑1 (MQ=60)

                TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT                                                                               <  SRR4302543.2262924/94‑1 (MQ=60)

                TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT                                                                               <  SRR4302543.2970037/94‑1 (MQ=60)

                TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT                                                                               >  SRR4302543.3071639/1‑94 (MQ=60)

                TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT                                                                               <  SRR4302543.5397171/94‑1 (MQ=60)

                 CCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATT                                                                              <  SRR4302543.5809020/94‑1 (MQ=60)

                 CCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATT                                                                              >  SRR4302543.1229955/1‑94 (MQ=60)

                   CCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTT                                                                            <  SRR4302543.7947403/94‑1 (MQ=60)

                    CATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTT                                                                           <  SRR4302543.5499333/94‑1 (MQ=60)

                     ATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTTTTCTAATTATTTTTT                                                                          >  SRR4302543.5094748/1‑94 (MQ=60)

                     ATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTA                                                                          >  SRR4302543.6466654/1‑94 (MQ=60)

                      TTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTAT                                                                         >  SRR4302543.6507147/1‑94 (MQ=60)

                      TTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTAT                                                                         <  SRR4302543.1969608/94‑1 (MQ=60)

                      TTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTAT                                                                         >  SRR4302543.318637/1‑94 (MQ=60)

                      TTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTAT                                                                         >  SRR4302543.4150680/1‑94 (MQ=60)

                        CCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA                                                                       >  SRR4302543.350136/1‑94 (MQ=60)

                        CCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA                                                                       <  SRR4302543.5829290/94‑1 (MQ=60)

                        CCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA                                                                       >  SRR4302543.4465229/1‑94 (MQ=60)

                          TGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAA                                                                     >  SRR4302543.1620612/1‑94 (MQ=60)

                          TGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAA                                                                     >  SRR4302543.430113/1‑94 (MQ=60)

                          TGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAA                                                                     <  SRR4302543.4837806/94‑1 (MQ=60)

                          CGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAA                                                                     <  SRR4302543.280847/94‑1 (MQ=60)

                           GGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAG                                                                    <  SRR4302543.1371301/94‑1 (MQ=60)

                            GCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGC                                                                   >  SRR4302543.6175212/1‑94 (MQ=60)

                            GCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGC                                                                   <  SRR4302543.1696368/94‑1 (MQ=60)

                            GCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGC                                                                   >  SRR4302543.7797534/1‑94 (MQ=60)

                             CGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCA                                                                  <  SRR4302543.7133907/94‑1 (MQ=60)

                             CGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCA                                                                  <  SRR4302543.7133908/94‑1 (MQ=60)

                             CGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCA                                                                  >  SRR4302543.3131627/1‑94 (MQ=60)

                             CGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCA                                                                  <  SRR4302543.120725/94‑1 (MQ=60)

                             CGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCA                                                                  >  SRR4302543.652036/1‑94 (MQ=60)

                              GTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAT                                                                 >  SRR4302543.3737682/1‑94 (MQ=60)

                              GTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAT                                                                 >  SRR4302543.790042/1‑94 (MQ=60)

                              GTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAT                                                                 >  SRR4302543.3737683/1‑94 (MQ=60)

                              GTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATGTTTATAAAAGCAC                                                                 >  SRR4302543.613793/1‑94 (MQ=60)

                               TATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTTTTCTAATTATTTTTATAAAAGCATC                                                                <  SRR4302543.5585788/94‑1 (MQ=60)

                               TATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATC                                                                <  SRR4302543.5585787/94‑1 (MQ=60)

                               TATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATC                                                                <  SRR4302543.471151/94‑1 (MQ=60)

                                ATGTCTGGCTAACAATCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC                                                               <  SRR4302543.5003030/94‑1 (MQ=60)

                                ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTATTTATTTTTATAAAAGCATCC                                                               >  SRR4302543.1674606/1‑94 (MQ=60)

                                ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC                                                               <  SRR4302543.5002771/94‑1 (MQ=60)

                                 TATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCG                                                              >  SRR4302543.1064075/1‑94 (MQ=60)

                                 TATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCG                                                              <  SRR4302543.5331450/94‑1 (MQ=60)

                                 TATCAGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCG                                                              <  SRR4302543.5271438/94‑1 (MQ=60)

                                  ATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGT                                                             <  SRR4302543.6469970/94‑1 (MQ=60)

                                  ATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGT                                                             >  SRR4302543.5239868/1‑94 (MQ=60)

                                  ATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGT                                                             >  SRR4302543.2695377/1‑94 (MQ=60)

                                   TCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTG                                                            <  SRR4302543.3849100/94‑1 (MQ=60)

                                     TGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAT                                                          >  SRR4302543.4507771/1‑94 (MQ=60)

                                     TGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAT                                                          <  SRR4302543.210695/94‑1 (MQ=60)

                                      GGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATA                                                         >  SRR4302543.1455490/1‑94 (MQ=60)

                                      GGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATA                                                         >  SRR4302543.2176836/1‑94 (MQ=60)

                                       GCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAA                                                        >  SRR4302543.6164582/1‑94 (MQ=60)

                                       GCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAA                                                        >  SRR4302543.1130915/1‑94 (MQ=60)

                                       GCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAA                                                        >  SRR4302543.1838314/1‑94 (MQ=60)

                                        CTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATACAAGCATCCGTGATAAT                                                       >  SRR4302543.7344289/1‑94 (MQ=60)

                                        CTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAT                                                       >  SRR4302543.2252922/1‑94 (MQ=60)

                                        CTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGCGCATGCGTAGCGACTTATTCTCATTATTTTTATAAAAGCATCCGTGATAAT                                                       >  SRR4302543.7467731/1‑94 (MQ=60)

                                         TAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATG                                                      <  SRR4302543.5788376/94‑1 (MQ=60)

                                         TAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATG                                                      <  SRR4302543.6600831/94‑1 (MQ=60)

                                         TAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATG                                                      <  SRR4302543.6600830/94‑1 (MQ=60)

                                            CATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAA                                                   >  SRR4302543.5928642/1‑94 (MQ=60)

                                             ATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAA                                                  >  SRR4302543.551285/1‑94 (MQ=60)

                                             ATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAA                                                  >  SRR4302543.3285940/1‑94 (MQ=60)

                                              TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG                                                 <  SRR4302543.4503373/94‑1 (MQ=60)

                                              TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG                                                 <  SRR4302543.5314770/94‑1 (MQ=60)

                                              TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG                                                 <  SRR4302543.1136151/94‑1 (MQ=60)

                                              TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG                                                 <  SRR4302543.3307358/94‑1 (MQ=60)

                                              TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG                                                 <  SRR4302543.1136150/94‑1 (MQ=60)

                                              TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG                                                 <  SRR4302543.1198969/94‑1 (MQ=60)

                                              TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG                                                 <  SRR4302543.229107/94‑1 (MQ=60)

                                              TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG                                                 <  SRR4302543.4512626/94‑1 (MQ=60)

                                               TCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGG                                                <  SRR4302543.6631587/94‑1 (MQ=60)

                                               TCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGG                                                >  SRR4302543.5310761/1‑94 (MQ=60)

                                               TCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGG                                                <  SRR4302543.6631586/94‑1 (MQ=60)

                                               TCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGG                                                <  SRR4302543.198845/94‑1 (MQ=60)

                                               TCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGG                                                <  SRR4302543.2189711/94‑1 (MQ=60)

                                               TCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGG                                                >  SRR4302543.1930520/1‑94 (MQ=60)

                                                CATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGC                                               <  SRR4302543.2055709/94‑1 (MQ=60)

                                                CATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGC                                               >  SRR4302543.2742326/1‑94 (MQ=60)

                                                 ATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCA                                              >  SRR4302543.4917484/1‑94 (MQ=60)

                                                  TCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAA                                             >  SRR4302543.833038/1‑94 (MQ=60)

                                                    AATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAG                                           >  SRR4302543.1340677/1‑94 (MQ=60)

                                                     ATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGA                                          >  SRR4302543.4011898/1‑94 (MQ=60)

                                                      TGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAA                                         <  SRR4302543.1440467/94‑1 (MQ=60)

                                                      TGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAA                                         <  SRR4302543.2556776/94‑1 (MQ=60)

                                                      TGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAA                                         <  SRR4302543.7495445/94‑1 (MQ=60)

                                                      TGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAA                                         <  SRR4302543.7029288/94‑1 (MQ=60)

                                                       GTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAA                                        >  SRR4302543.3888687/1‑94 (MQ=60)

                                                       GTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAA                                        >  SRR4302543.7244224/1‑94 (MQ=60)

                                                        TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC                                       <  SRR4302543.3221713/94‑1 (MQ=60)

                                                        TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC                                       <  SRR4302543.3433593/94‑1 (MQ=60)

                                                         GATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACG                                      >  SRR4302543.1521513/1‑94 (MQ=60)

                                                          ATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGT                                     >  SRR4302543.7951280/1‑94 (MQ=60)

                                                           TAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTC                                    >  SRR4302543.6240618/1‑94 (MQ=60)

                                                            AGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCA                                   <  SRR4302543.115813/94‑1 (MQ=60)

                                                            AGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCA                                   <  SRR4302543.6378237/94‑1 (MQ=60)

                                                            AGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCA                                   >  SRR4302543.5442354/1‑94 (MQ=60)

                                                            AGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCA                                   >  SRR4302543.2420969/1‑94 (MQ=60)

                                                             GATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAA                                  <  SRR4302543.2218849/94‑1 (MQ=60)

                                                              ATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAT                                 <  SRR4302543.1775866/94‑1 (MQ=60)

                                                              ATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAT                                 <  SRR4302543.3309078/94‑1 (MQ=60)

                                                              ATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAT                                 <  SRR4302543.781997/94‑1 (MQ=60)

                                                               TTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATT                                <  SRR4302543.3991662/94‑1 (MQ=60)

                                                               TTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAATCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATT                                <  SRR4302543.17903/94‑1 (MQ=60)

                                                                TCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTT                               <  SRR4302543.817501/94‑1 (MQ=60)

                                                                TCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTT                               <  SRR4302543.2804287/94‑1 (MQ=60)

                                                                 CCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGCTAATGAAAAGGCCACGAGACGTCAATTTG                              >  SRR4302543.2995743/1‑94 (MQ=60)

                                                                 CCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTG                              <  SRR4302543.7489523/94‑1 (MQ=60)

                                                                 CCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTG                              >  SRR4302543.7951589/1‑94 (MQ=60)

                                                                 CCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTG                              <  SRR4302543.4362572/94‑1 (MQ=60)

                                                                  CTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGT                             >  SRR4302543.4708254/1‑94 (MQ=60)

                                                                  CTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGT                             <  SRR4302543.3519140/94‑1 (MQ=60)

                                                                  CTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGT                             >  SRR4302543.3662454/1‑94 (MQ=60)

                                                                  CTCTCACGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATGTTTATAAAAGCATCCTAGATAATGAAAATGCAAAGAAACGTCAATTTGT                             >  SRR4302543.4708255/1‑94 (MQ=60)

                                                                   TCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTT                            >  SRR4302543.7884517/1‑94 (MQ=60)

                                                                    CTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTA                           >  SRR4302543.6173044/1‑94 (MQ=60)

                                                                    CTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTA                           >  SRR4302543.3048748/1‑94 (MQ=60)

                                                                    CTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTA                           >  SRR4302543.3747726/1‑94 (MQ=60)

                                                                    CTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTA                           >  SRR4302543.5271923/1‑94 (MQ=60)

                                                                     TCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAT                          <  SRR4302543.2788809/94‑1 (MQ=60)

                                                                       CCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTG                        <  SRR4302543.5107845/94‑1 (MQ=60)

                                                                         GCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGAT                      >  SRR4302543.6805025/1‑94 (MQ=60)

                                                                         GCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGAT                      <  SRR4302543.4795252/94‑1 (MQ=60)

                                                                         GCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGAT                      >  SRR4302543.2427491/1‑94 (MQ=60)

                                                                         GCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGAT                      <  SRR4302543.5458081/94‑1 (MQ=60)

                                                                          CATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATG                     <  SRR4302543.3806821/94‑1 (MQ=60)

                                                                           ATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGT                    >  SRR4302543.635771/1‑94 (MQ=60)

                                                                            TTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTT                   >  SRR4302543.5003193/1‑94 (MQ=60)

                                                                            TTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTT                   >  SRR4302543.4523423/1‑94 (MQ=60)

                                                                             TTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTG                  <  SRR4302543.6654684/94‑1 (MQ=60)

                                                                             TTATGGGAATGCGTAGCGAATTATTCGAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTG                  <  SRR4302543.4013727/94‑1 (MQ=60)

                                                                              TATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGG                 <  SRR4302543.7607565/94‑1 (MQ=60)

                                                                              TATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGG                 <  SRR4302543.4142110/94‑1 (MQ=60)

                                                                              TATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGG                 <  SRR4302543.2718392/94‑1 (MQ=60)

                                                                               ATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGT                <  SRR4302543.590985/94‑1 (MQ=60)

                                                                                 GGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTAT              <  SRR4302543.5296355/94‑1 (MQ=60)

                                                                                  GGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATT             >  SRR4302543.1084060/1‑94 (MQ=60)

                                                                                  GGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATT             >  SRR4302543.3725183/1‑94 (MQ=60)

                                                                                  GGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATT             <  SRR4302543.28330/94‑1 (MQ=60)

                                                                                   GAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTA            >  SRR4302543.4970469/1‑94 (MQ=60)

                                                                                    AATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTAC           <  SRR4302543.3025435/94‑1 (MQ=60)

                                                                                     ATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACT          >  SRR4302543.2639330/1‑94 (MQ=60)

                                                                                     ATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACT          >  SRR4302543.6428701/1‑94 (MQ=60)

                                                                                     ATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACT          <  SRR4302543.5290121/94‑1 (MQ=60)

                                                                                      TGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTC         >  SRR4302543.1515723/1‑94 (MQ=60)

                                                                                       GCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCG        <  SRR4302543.4797292/94‑1 (MQ=60)

                                                                                       GCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCG        <  SRR4302543.4797546/94‑1 (MQ=60)

                                                                                        CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT       <  SRR4302543.6913947/94‑1 (MQ=60)

                                                                                        CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT       <  SRR4302543.6117872/94‑1 (MQ=60)

                                                                                        CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT       <  SRR4302543.6357707/94‑1 (MQ=60)

                                                                                        CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT       >  SRR4302543.6896050/1‑94 (MQ=60)

                                                                                         GTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG      >  SRR4302543.3571514/1‑94 (MQ=60)

                                                                                         GTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG      >  SRR4302543.5566326/1‑94 (MQ=60)

                                                                                         GTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG      >  SRR4302543.2794095/1‑94 (MQ=60)

                                                                                         GTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG      >  SRR4302543.2113501/1‑94 (MQ=60)

                                                                                          TAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGG     >  SRR4302543.1337481/1‑94 (MQ=60)

                                                                                          TAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGG     <  SRR4302543.2793943/94‑1 (MQ=60)

                                                                                          TAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGG     <  SRR4302543.4807993/94‑1 (MQ=60)

                                                                                             CGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCCG  >  SRR4302543.4499962/1‑94 (MQ=60)

TCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCCG  >  NC_000913/3851417‑3851603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`