Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,870,765 |
+G |
coding (476/1764 nt) |
dgoA ← |
2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,870,764 | 1 | . | G | 100.0%
| 863.9
/ NA
| 272 | A159A (GCA→GCC) | dgoA | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (120/152); total (120/152) |
Only 100 of 285 total aligned reads displayed.
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG > NC_000913/3870672‑3870851
|
cgGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑g < 1:969932/93‑1 (MQ=255)
ggTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑gg > 2:2478206/1‑92 (MQ=255)
ctctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAc < 1:567537/93‑1 (MQ=255)
tctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcg > 2:3354234/1‑93 (MQ=255)
ttACGGATGGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgc < 2:1691782/92‑1 (MQ=255)
tACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgcc < 2:2261200/93‑1 (MQ=255)
tACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgcc > 1:2553288/1‑93 (MQ=255)
ggATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCTCCAGGTTTTCTGGCGTCACgccgcc > 1:546183/1‑93 (MQ=255)
ggATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACgccgcc > 2:1198576/1‑93 (MQ=255)
ttGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAc > 1:2786094/1‑93 (MQ=255)
tGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACg < 2:2881563/93‑1 (MQ=255)
cccGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGc > 1:1409098/1‑93 (MQ=255)
ccGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCa < 1:1561219/93‑1 (MQ=255)
ggCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCaaa < 1:4489870/93‑1 (MQ=255)
gcgcGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCTCCAACGGCAAAg < 1:4088057/93‑1 (MQ=255)
gcgcGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAg < 1:1720016/93‑1 (MQ=255)
gcgcGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAg > 1:736102/1‑93 (MQ=255)
gcgcGATAGAGAGCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAg < 2:3374530/93‑1 (MQ=255)
gATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTg < 1:837659/93‑1 (MQ=255)
gATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTg > 2:4367010/1‑93 (MQ=255)
aTAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc < 2:1330187/93‑1 (MQ=255)
aTAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc < 1:1578752/93‑1 (MQ=255)
aTAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc < 2:2378309/93‑1 (MQ=255)
aTAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc > 1:768866/1‑93 (MQ=255)
tAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCg > 1:1358990/1‑93 (MQ=255)
agagATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGa < 1:302169/93‑1 (MQ=255)
agaTCTCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg < 1:510136/93‑1 (MQ=255)
agaTCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg > 2:4540928/1‑93 (MQ=255)
agaTCGCT‑CCGAAGCCCCGCCCCTGCACAACCGGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg < 2:1620918/93‑1 (MQ=255)
gaTCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt < 1:4200284/93‑1 (MQ=255)
gaTCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt < 1:1176731/93‑1 (MQ=255)
aTCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTc > 1:2102516/1‑93 (MQ=255)
tCGCTGCCTAAG‑CGCGCCCCTGCACAACCTGCGCCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCCACGGCAAAGACTGCGATGttc > 2:4061900/1‑91 (MQ=255)
tCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTcc > 1:4403888/1‑93 (MQ=255)
tCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTcc < 2:4428654/93‑1 (MQ=255)
cGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCg < 2:3711289/93‑1 (MQ=255)
gCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTTCgt > 2:540023/1‑92 (MQ=255)
gCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGa < 2:3058681/93‑1 (MQ=255)
gCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGa > 1:610111/1‑93 (MQ=255)
gCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGa < 2:2779309/93‑1 (MQ=255)
tGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATg < 1:1081926/93‑1 (MQ=255)
cgCCTAGG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCCCGCCGCCAACGGCAAAGACTGCGATGTCCGATg < 2:477682/92‑1 (MQ=255)
tAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCaa > 1:3380382/1‑93 (MQ=255)
tAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCaa > 1:2859890/1‑93 (MQ=255)
g‑cccgcccCTGCACACCCTGCGTCTATCCGCTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAc < 1:1305308/93‑1 (MQ=255)
g‑cccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAc < 2:3859499/93‑1 (MQ=255)
g‑cccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAc > 2:1035469/1‑93 (MQ=255)
cccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAcc < 1:2068463/93‑1 (MQ=255)
ccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCg > 2:2981634/1‑93 (MQ=255)
gcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCt > 2:474809/1‑93 (MQ=255)
cccccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCt < 1:2721971/92‑1 (MQ=255)
cccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCGAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCttt < 2:3770397/93‑1 (MQ=255)
cTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTa < 1:2481703/93‑1 (MQ=255)
tGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTaa < 2:3484144/93‑1 (MQ=255)
tGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTaa > 2:62441/1‑93 (MQ=255)
tGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTaa > 2:4187302/1‑93 (MQ=255)
gCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAc < 1:2197091/93‑1 (MQ=255)
gCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAc < 1:3831035/93‑1 (MQ=255)
gCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAc > 1:1641182/1‑93 (MQ=255)
acaACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGc > 1:3701716/1‑93 (MQ=255)
caACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCt > 1:3952801/1‑93 (MQ=255)
caACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCt < 1:4326417/93‑1 (MQ=255)
aaCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCtt < 2:4518290/93‑1 (MQ=255)
aaCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCtt > 1:1160943/1‑93 (MQ=255)
aaCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCtt < 1:235447/93‑1 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt < 2:828582/93‑1 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt > 1:2893324/1‑93 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt < 2:3956003/93‑1 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt < 2:3149764/93‑1 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt > 2:2746539/1‑93 (MQ=255)
tGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAt < 2:701355/93‑1 (MQ=255)
tGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAt < 1:4032571/93‑1 (MQ=255)
gCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATg < 1:3126386/93‑1 (MQ=255)
gCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATg < 1:3117113/93‑1 (MQ=255)
gTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTa < 1:3593783/93‑1 (MQ=255)
tCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAt > 1:1907526/1‑93 (MQ=255)
tCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAt < 1:4532833/93‑1 (MQ=255)
cTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAtt < 1:2330203/93‑1 (MQ=255)
cTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAtt < 1:635241/93‑1 (MQ=255)
cTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAtt < 2:15385/93‑1 (MQ=255)
cTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAtt < 1:4457983/93‑1 (MQ=255)
tATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTg > 2:3182015/1‑93 (MQ=255)
tATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTg < 2:3542033/93‑1 (MQ=255)
aTCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGc < 2:3238524/93‑1 (MQ=255)
ccACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCgg > 1:3524653/1‑93 (MQ=255)
aCTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAc < 1:4174773/93‑1 (MQ=255)
aCTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAc < 1:2395432/93‑1 (MQ=255)
aCTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAc > 2:1514432/1‑93 (MQ=255)
cTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAcc > 2:146364/1‑93 (MQ=255)
gcaaGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCaaaa < 1:2959108/90‑1 (MQ=255)
gcCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCaaaa < 2:197712/93‑1 (MQ=255)
gcCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCaaaa > 2:1111588/1‑93 (MQ=255)
cAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGc < 2:330146/93‑1 (MQ=255)
cAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGc > 2:2233925/1‑93 (MQ=255)
aGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGcc > 1:3933216/1‑93 (MQ=255)
aGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGcc < 1:4589759/93‑1 (MQ=255)
aGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGcc < 2:2416416/93‑1 (MQ=255)
gTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGa > 2:871492/1‑93 (MQ=255)
ttttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt < 2:291853/93‑1 (MQ=255)
ttttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt > 1:226676/1‑93 (MQ=255)
|
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAG‑CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG > NC_000913/3870672‑3870851
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA > NC_000913/3870672‑3870856
|
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G < SRR4302535.2929342/94‑1 (MQ=60)
CGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GG < SRR4302535.976819/94‑1 (MQ=60)
GCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTC < SRR4302535.1615739/94‑1 (MQ=60)
CGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCA > SRR4302535.1101147/1‑94 (MQ=60)
GCTCTACGGATTGCCCGGCGCGATAGAAGTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTGTCCACTGCGCCAGGTTTTGTGGCGTCAC > SRR4302535.1203990/1‑94 (MQ=60)
CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACG > SRR4302535.3143155/1‑94 (MQ=60)
CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACG < SRR4302535.571516/94‑1 (MQ=60)
CTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCC > SRR4302535.2571671/1‑94 (MQ=60)
CTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCC > SRR4302535.2624322/1‑94 (MQ=60)
CGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCTCCAGGTTTTCTGGCGTCACGCCGCC > SRR4302535.550002/1‑94 (MQ=60)
ggagggcccggcggaaaagcgcgcgctcCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCA < SRR4302535.2415306/66‑1 (MQ=60)
GGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCA > SRR4302535.4298435/1‑94 (MQ=60)
GGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCA > SRR4302535.2839611/1‑94 (MQ=60)
GGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCA > SRR4302535.1605672/1‑94 (MQ=60)
GATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAA > SRR4302535.15746/1‑94 (MQ=60)
ATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAC < SRR4302535.2302554/94‑1 (MQ=60)
ATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAC > SRR4302535.2260082/1‑94 (MQ=60)
ATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAC > SRR4302535.2805922/1‑94 (MQ=60)
TTGCCCGGCGCGATAGATATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACG < SRR4302535.4455701/94‑1 (MQ=60)
TTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACG > SRR4302535.4216011/1‑94 (MQ=60)
TGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGG < SRR4302535.3962472/94‑1 (MQ=60)
GCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGC > SRR4302535.1419160/1‑94 (MQ=60)
CCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAA < SRR4302535.1572469/94‑1 (MQ=60)
CGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCACCAACGGCAAA > SRR4302535.3818547/1‑94 (MQ=60)
GGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAG < SRR4302535.4520689/94‑1 (MQ=60)
GGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAG < SRR4302535.332538/94‑1 (MQ=60)
GGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAG < SRR4302535.814129/94‑1 (MQ=60)
GGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAG > SRR4302535.741277/1‑94 (MQ=60)
GCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCTCCAACGGCAAAGA < SRR4302535.4116030/94‑1 (MQ=60)
GCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGA < SRR4302535.1732456/94‑1 (MQ=60)
GCGCAATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCGCGCCGCCAACGGCAAAGA < SRR4302535.627512/94‑1 (MQ=60)
GATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGC > SRR4302535.774277/1‑94 (MQ=60)
GATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGC < SRR4302535.843540/94‑1 (MQ=60)
GATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGC < SRR4302535.4403552/94‑1 (MQ=60)
GATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGC > SRR4302535.165683/1‑94 (MQ=60)
ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG < SRR4302535.1590150/94‑1 (MQ=60)
ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG < SRR4302535.2200602/94‑1 (MQ=60)
ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG > SRR4302535.1368708/1‑94 (MQ=60)
ATAGAGACCGCTGCCTACGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG < SRR4302535.4037830/94‑1 (MQ=60)
TAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGA > SRR4302535.4487643/1‑94 (MQ=60)
AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAT > SRR4302535.2651961/1‑94 (MQ=60)
AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAT < SRR4302535.1197776/94‑1 (MQ=60)
AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAT < SRR4302535.304273/94‑1 (MQ=60)
GAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATG < SRR4302535.4217985/94‑1 (MQ=60)
GAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATG > SRR4302535.3870780/1‑94 (MQ=60)
AGATCTCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGT < SRR4302535.513703/94‑1 (MQ=60)
AGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGT < SRR4302535.2343307/94‑1 (MQ=60)
GATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTC < SRR4302535.1185129/94‑1 (MQ=60)
GATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTC > SRR4302535.2117679/1‑94 (MQ=60)
GATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTC < SRR4302535.4229027/94‑1 (MQ=60)
ATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCC > SRR4302535.4434025/1‑94 (MQ=60)
CGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGA > SRR4302535.2360342/1‑94 (MQ=60)
CGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGA > SRR4302535.614362/1‑94 (MQ=60)
cgccctaacccccCCCCTCCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG < SRR4302535.2469532/81‑1 (MQ=60)
TGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGG > SRR4302535.3667124/1‑94 (MQ=60)
TGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGG < SRR4302535.1089618/94‑1 (MQ=60)
CCTAAGCCCGCCCCTGCACAACCTGCTTCTAGCCACTGCGCCAGGTTTTCTGGCGCCCCGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCA < SRR4302535.1215331/94‑1 (MQ=60)
CCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCA > SRR4302535.3540053/1‑94 (MQ=60)
CTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAA > SRR4302535.3403884/1‑94 (MQ=60)
CTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAA > SRR4302535.2880147/1‑94 (MQ=60)
TACGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAT < SRR4302535.2880620/94‑1 (MQ=60)
TAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAT < SRR4302535.4547568/94‑1 (MQ=60)
AAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATA > SRR4302535.723123/1‑94 (MQ=60)
AAGCCCCCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACTCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATA < SRR4302535.1174392/94‑1 (MQ=60)
AGCCCGCCCCTGCACATCCTGCGTCTATCCACTGCGCCAGGTTGTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAC < SRR4302535.953699/94‑1 (MQ=60)
AGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAC > SRR4302535.4669803/1‑94 (MQ=60)
GCCCGCCCCTGCGCAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACC < SRR4302535.2768776/94‑1 (MQ=60)
GCCCGCCCCTGCACACCCTGCGTCTATCCGCTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACC < SRR4302535.1314626/94‑1 (MQ=60)
GCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACC < SRR4302535.3551723/94‑1 (MQ=60)
GCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACC < SRR4302535.4139364/94‑1 (MQ=60)
CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCG < SRR4302535.620090/94‑1 (MQ=60)
CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCG < SRR4302535.2083373/94‑1 (MQ=60)
CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCG > SRR4302535.690007/1‑94 (MQ=60)
CGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCT > SRR4302535.3448160/1‑94 (MQ=60)
CGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCT > SRR4302535.1179207/1‑94 (MQ=60)
GCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTT < SRR4302535.2399642/94‑1 (MQ=60)
CCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTT < SRR4302535.2741415/94‑1 (MQ=60)
CCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTT > SRR4302535.584299/1‑94 (MQ=60)
CCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTT > SRR4302535.2111572/1‑94 (MQ=60)
CCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTT > SRR4302535.2111571/1‑94 (MQ=60)
CCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTT > SRR4302535.799719/1‑94 (MQ=60)
CCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTT > SRR4302535.2879993/1‑94 (MQ=60)
CCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTT < SRR4302535.3074168/94‑1 (MQ=60)
CCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTA > SRR4302535.1903220/1‑94 (MQ=60)
CTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAA < SRR4302535.2499595/94‑1 (MQ=60)
CTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAA < SRR4302535.1723882/94‑1 (MQ=60)
CTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAACGCTTTTAA > SRR4302535.238844/1‑94 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC < SRR4302535.2132774/94‑1 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC < SRR4302535.3120782/94‑1 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC > SRR4302535.1653044/1‑94 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC > SRR4302535.2354392/1‑94 (MQ=60)
GCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACG < SRR4302535.3857454/94‑1 (MQ=60)
GCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACG < SRR4302535.770839/94‑1 (MQ=60)
GCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACG < SRR4302535.2212750/94‑1 (MQ=60)
CACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACTGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGC > SRR4302535.4518535/1‑94 (MQ=60)
CACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGC > SRR4302535.3727353/1‑94 (MQ=60)
CACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGC > SRR4302535.75247/1‑94 (MQ=60)
ACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCT < SRR4302535.2486453/94‑1 (MQ=60)
ACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCT > SRR4302535.3979788/1‑94 (MQ=60)
CAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT > SRR4302535.1169243/1‑94 (MQ=60)
CAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT < SRR4302535.4356002/94‑1 (MQ=60)
AACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTT < SRR4302535.1421869/94‑1 (MQ=60)
AACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTT > SRR4302535.2913788/1‑94 (MQ=60)
AACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTT < SRR4302535.237073/94‑1 (MQ=60)
ACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTG < SRR4302535.880495/94‑1 (MQ=60)
ACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTG > SRR4302535.524910/1‑94 (MQ=60)
ACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTG < SRR4302535.4603214/94‑1 (MQ=60)
ACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTG < SRR4302535.3882604/94‑1 (MQ=60)
CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT < SRR4302535.2886655/94‑1 (MQ=60)
TGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATG < SRR4302535.4060158/94‑1 (MQ=60)
TGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATG < SRR4302535.2566722/94‑1 (MQ=60)
TGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATG > SRR4302535.4625527/1‑94 (MQ=60)
GCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGT < SRR4302535.3148160/94‑1 (MQ=60)
GCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGT < SRR4302535.3138813/94‑1 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT < SRR4302535.2523318/94‑1 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT > SRR4302535.4049604/1‑94 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT > SRR4302535.604851/1‑94 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT < SRR4302535.3618724/94‑1 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT > SRR4302535.1509373/1‑94 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT > SRR4302535.1921277/1‑94 (MQ=60)
TCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATT < SRR4302535.4563856/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302535.4096976/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302535.639667/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302535.4488558/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG > SRR4302535.3603306/1‑94 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302535.2346870/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302535.3796667/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302535.3691607/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG > SRR4302535.2055658/1‑94 (MQ=60)
ATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCG > SRR4302535.568704/1‑94 (MQ=60)
ATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCG < SRR4302535.4096660/94‑1 (MQ=60)
TCCACTGCGCCAGGTTTTCTGGCGTCACGTCGCCAACGGCAAAGACTGCGATGTCCGGTGGCAATACCGCTTTTAACGCTTTGATGTATTGCGG > SRR4302535.4494381/1‑94 (MQ=60)
TCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGG > SRR4302535.3549131/1‑94 (MQ=60)
CACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC < SRR4302535.4142733/94‑1 (MQ=60)
CACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC < SRR4302535.4583928/94‑1 (MQ=60)
ACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACC < SRR4302535.4203346/94‑1 (MQ=60)
ACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACC < SRR4302535.2412649/94‑1 (MQ=60)
GCTAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG < SRR4302535.4534475/94‑1 (MQ=60)
GCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG > SRR4302535.1338413/1‑94 (MQ=60)
GCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG > SRR4302535.1376915/1‑94 (MQ=60)
GCAAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG < SRR4302535.2979888/94‑1 (MQ=60)
CCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGC > SRR4302535.1410670/1‑94 (MQ=60)
CAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC < SRR4302535.301964/94‑1 (MQ=60)
CAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC > SRR4302535.3035304/1‑94 (MQ=60)
CAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC > SRR4302535.3960060/1‑94 (MQ=60)
CAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC < SRR4302535.1796762/94‑1 (MQ=60)
CAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC < SRR4302535.1363686/94‑1 (MQ=60)
CGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG < SRR4302535.3379938/94‑1 (MQ=60)
AGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG < SRR4302535.4621003/94‑1 (MQ=60)
AGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAAGCTTTGATGTATTGCGGACCAAAAGCCG > SRR4302535.541590/1‑94 (MQ=60)
GTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT > SRR4302535.228236/1‑94 (MQ=60)
GTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT > SRR4302535.4275611/1‑94 (MQ=60)
GTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT < SRR4302535.2969360/94‑1 (MQ=60)
GTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT < SRR4302535.1947731/94‑1 (MQ=60)
GTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT < SRR4302535.4356395/94‑1 (MQ=60)
TTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGAC < SRR4302535.3930404/94‑1 (MQ=60)
ctgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGG > SRR4302535.588075/4‑94 (MQ=60)
ctgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGG > SRR4302535.277947/4‑94 (MQ=60)
tgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA > SRR4302535.3586622/3‑94 (MQ=60)
tgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA < SRR4302535.3895970/92‑1 (MQ=60)
|
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA > NC_000913/3870672‑3870856
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |