Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,914,878 |
T→C |
E42E (GAA→GAG) |
atpD ← |
membrane‑bound ATP synthase, F1 sector, beta‑subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,914,878 | 0 | T | C | 100.0%
| 690.0
/ NA
| 220 | E42E (GAA→GAG) | atpD | membrane‑bound ATP synthase, F1 sector, beta‑subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (120/100); total (120/100) |
Only 100 of 230 total aligned reads displayed.
GAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTAC > NC_000913/3914788‑3914967
|
gAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTc < 2:4379684/93‑1 (MQ=255)
aGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTcc < 1:2601618/93‑1 (MQ=255)
aGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTcc > 2:2340781/1‑93 (MQ=255)
ggTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTCCGATACCGCCGCCGAGCTGCTGCTGAACCTCCa < 2:2314198/93‑1 (MQ=255)
ggTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCCAGCTGCTGCTGAACCTccg > 1:4263442/1‑92 (MQ=255)
tCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGc > 2:1817902/1‑93 (MQ=255)
cTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCa > 1:4066739/1‑93 (MQ=255)
cTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCa < 1:3774258/93‑1 (MQ=255)
ttACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCa < 1:2385512/93‑1 (MQ=255)
ttACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCa < 2:2725022/93‑1 (MQ=255)
ttACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCa > 2:2380359/1‑93 (MQ=255)
ttACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCa < 1:1214153/93‑1 (MQ=255)
ttACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATAACGCAGCCGAGCTGCTGCTGAACCTCCAGCACCa > 1:2852557/1‑93 (MQ=255)
tACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAg > 1:2642683/1‑93 (MQ=255)
tACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAg > 1:1760332/1‑93 (MQ=255)
aCATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGa < 2:1329411/93‑1 (MQ=255)
cATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGAc > 1:1963457/1‑93 (MQ=255)
cATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGAc < 2:3449548/93‑1 (MQ=255)
aTCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACg > 1:2931362/1‑93 (MQ=255)
aTCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACg > 2:3153208/1‑93 (MQ=255)
tCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGc < 1:3041617/93‑1 (MQ=255)
tCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGc > 1:4338228/1‑93 (MQ=255)
cAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTc > 1:2441548/1‑93 (MQ=255)
aGACTGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTAAACCTCCAGCACCAGACGCTCa > 1:502781/1‑93 (MQ=255)
aGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCa < 2:1147312/93‑1 (MQ=255)
aGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCa > 2:3587506/1‑93 (MQ=255)
aGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGAAGCTCa > 1:731680/1‑93 (MQ=255)
gACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCAt > 2:1244232/1‑93 (MQ=255)
aCCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCACAtt < 2:335360/93‑1 (MQ=255)
ccGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTa < 2:4118860/93‑1 (MQ=255)
cgcgACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTAc < 2:1846344/93‑1 (MQ=255)
gcgACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTAcc < 1:2803796/93‑1 (MQ=255)
cgACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCa < 1:229912/93‑1 (MQ=255)
gACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCAt < 1:918233/93‑1 (MQ=255)
cGCAGACCGGCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCAttt < 1:1350007/93‑1 (MQ=255)
gCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCAtttt < 2:853889/93‑1 (MQ=255)
gCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCAtttt > 1:4158365/1‑93 (MQ=255)
gCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCAtttt < 1:3563887/93‑1 (MQ=255)
cAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTg > 2:4279616/1‑93 (MQ=255)
cAGACCGTCGGAGGAACCCATGGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAGCCTCCAGCACCAGACGCTCATTACCATTTTg < 1:942035/93‑1 (MQ=255)
cAGACCCTCGGAGGAACCCCTTGGGATGGTACGTACGAATCCGCCGCCGAGCTGCTTCTTAACCCCCAGCACCAGACGCTCATTACCATTTTg < 2:4178100/93‑1 (MQ=255)
aGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGc > 1:1549956/1‑93 (MQ=255)
aGACCGTCGGAGGAACCCACTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGc > 2:4562889/1‑93 (MQ=255)
gACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCa > 2:3866501/1‑93 (MQ=255)
tCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCa > 1:1265128/1‑93 (MQ=255)
tCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCCCATTACCATTTTGCACCTCa > 2:2641091/1‑93 (MQ=255)
cGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCaa < 2:3094189/93‑1 (MQ=255)
cGGAGAAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCaa < 1:453773/93‑1 (MQ=255)
gaggaACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAaga < 1:1407797/93‑1 (MQ=255)
aggaACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAagag < 1:3703908/93‑1 (MQ=255)
aggaACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAagag < 2:2236929/93‑1 (MQ=255)
aggaACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAagag < 2:4251168/93‑1 (MQ=255)
aggaACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAagag < 1:3714223/93‑1 (MQ=255)
gaACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCa > 2:1189152/1‑93 (MQ=255)
gaACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCa < 1:1074060/93‑1 (MQ=255)
gaACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCa < 2:3892527/93‑1 (MQ=255)
aCCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATc > 2:2747593/1‑93 (MQ=255)
aCCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATc > 1:3510234/1‑93 (MQ=255)
aCCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATc < 2:4205952/93‑1 (MQ=255)
ccATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGt > 1:277879/1‑93 (MQ=255)
ccATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGt > 2:3047638/1‑93 (MQ=255)
ccATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGt > 2:2279579/1‑93 (MQ=255)
aTTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTac > 2:1448532/1‑93 (MQ=255)
aTTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTac < 2:2493614/93‑1 (MQ=255)
aTTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTac > 1:1526867/1‑93 (MQ=255)
aTTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTac < 1:2290153/93‑1 (MQ=255)
ttGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTaca < 2:365146/93‑1 (MQ=255)
tGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTacac < 1:4435267/93‑1 (MQ=255)
cGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACAcgc < 2:2574767/93‑1 (MQ=255)
cGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACAcgc > 2:1897466/1‑93 (MQ=255)
gATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACAcgcg > 1:3349130/1‑93 (MQ=255)
tGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACAcgcgcg > 1:1620625/1‑93 (MQ=255)
gtacgtacGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCgga > 2:2938835/1‑92 (MQ=255)
tacgATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGc < 2:461451/93‑1 (MQ=255)
acgATGCCGCCGCCGAGCTGCTGCGGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCa < 2:3821729/93‑1 (MQ=255)
acgATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCa > 1:100876/1‑93 (MQ=255)
cgATACGGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGGACACGCGCGGTACGGCAt > 2:2139287/1‑93 (MQ=255)
cgATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCAt < 1:3805413/93‑1 (MQ=255)
aTACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATcc > 1:4462863/1‑93 (MQ=255)
aTACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATcc > 2:4074832/1‑93 (MQ=255)
tACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCt > 1:620631/1‑93 (MQ=255)
tACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCt > 1:2551805/1‑93 (MQ=255)
ccgccgccgAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGa < 1:2066752/93‑1 (MQ=255)
cgccgccgAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAg > 2:600391/1‑93 (MQ=255)
gccgAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGaa < 1:3654368/93‑1 (MQ=255)
cgAGCTGCTCCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGATACGGCATCCTGAGGGAAtt < 2:3285142/93‑1 (MQ=255)
gAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGGACGGCATCCTGAGGGAATTc > 2:513399/1‑93 (MQ=255)
gctgctgctGACCCTCAAGCATCAGACGCTCATTACCATTTTGCCCCTCAAGAGCATCGTACACGCGCTGTACGGCATCCTGAGGGAATTCGa < 2:1641834/93‑1 (MQ=255)
gctgctgctGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGa < 2:815845/93‑1 (MQ=255)
ctgctgctgAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGAc < 1:4622783/93‑1 (MQ=255)
tgctgctgAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACg > 2:3086012/1‑93 (MQ=255)
tgctgAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCa < 1:2341111/93‑1 (MQ=255)
tctgAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCaa < 2:1392984/92‑1 (MQ=255)
gctgAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCaa > 2:349178/1‑93 (MQ=255)
ctgAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAAc < 1:983049/93‑1 (MQ=255)
ctgAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAAc < 1:2891423/93‑1 (MQ=255)
ctgAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAAc < 2:1990502/93‑1 (MQ=255)
tgAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACt > 1:4389915/1‑93 (MQ=255)
aaCCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTAc < 1:316273/93‑1 (MQ=255)
aaCCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTAc < 2:2887894/93‑1 (MQ=255)
|
GAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTAC > NC_000913/3914788‑3914967
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCGAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCG > NC_000913/3914785‑3914971
|
TTCGAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACC > SRR4302535.2519279/1‑94 (MQ=60)
TCGAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCT < SRR4302535.3366911/94‑1 (MQ=60)
TCGAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCT < SRR4302535.1530904/94‑1 (MQ=60)
TCGAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATGGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCT < SRR4302535.2744159/94‑1 (MQ=60)
CGAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTC < SRR4302535.4360542/94‑1 (MQ=60)
GAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCC < SRR4302535.2818303/94‑1 (MQ=60)
AGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCA < SRR4302535.2620296/94‑1 (MQ=60)
GGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAG < SRR4302535.2838874/94‑1 (MQ=60)
TCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCA > SRR4302535.4094566/1‑94 (MQ=60)
CTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCAC < SRR4302535.3800286/94‑1 (MQ=60)
TTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATAACGCAGCCGAGCTGCTGCTGAACCTCCAGCACCA > SRR4302535.2872767/1‑94 (MQ=60)
TTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAG < SRR4302535.947394/94‑1 (MQ=60)
TTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAG > SRR4302535.1773076/1‑94 (MQ=60)
TTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAG > SRR4302535.1539159/1‑94 (MQ=60)
TTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAG > SRR4302535.2661608/1‑94 (MQ=60)
TTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAG < SRR4302535.2402652/94‑1 (MQ=60)
TTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAG < SRR4302535.1222859/94‑1 (MQ=60)
ACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGAC > SRR4302535.1977614/1‑94 (MQ=60)
ACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTAAGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGAC > SRR4302535.3697985/1‑94 (MQ=60)
CATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGGGCTGCTGCTGAACCTCCAGCACCAGACG > SRR4302535.1247684/1‑94 (MQ=60)
CATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACG > SRR4302535.2952003/1‑94 (MQ=60)
CATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACG > SRR4302535.1327736/1‑94 (MQ=60)
CATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACG < SRR4302535.4397405/94‑1 (MQ=60)
ATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGC > SRR4302535.3620066/1‑94 (MQ=60)
ATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGC > SRR4302535.2641940/1‑94 (MQ=60)
ATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGC > SRR4302535.4367896/1‑94 (MQ=60)
TCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATCCCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCT < SRR4302535.2998518/94‑1 (MQ=60)
TCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCT < SRR4302535.3062927/94‑1 (MQ=60)
CCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTC < SRR4302535.2098723/94‑1 (MQ=60)
CCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTC > SRR4302535.2459136/1‑94 (MQ=60)
CAGACTGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTAAACCTCCAGCACCAGACGCTCA > SRR4302535.506297/1‑94 (MQ=60)
CAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGAAGCTCA > SRR4302535.736817/1‑94 (MQ=60)
AGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCAT > SRR4302535.4511274/1‑94 (MQ=60)
AGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCAT < SRR4302535.1315681/94‑1 (MQ=60)
CCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTAC < SRR4302535.4068199/94‑1 (MQ=60)
CCGCCACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTAC < SRR4302535.29280/94‑1 (MQ=60)
CGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACC > SRR4302535.1528588/1‑94 (MQ=60)
CGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACC < SRR4302535.2666096/94‑1 (MQ=60)
GCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCA > SRR4302535.1552417/1‑94 (MQ=60)
GCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCA < SRR4302535.2823734/94‑1 (MQ=60)
GCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCA > SRR4302535.2317386/1‑94 (MQ=60)
CGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCAT > SRR4302535.383158/1‑94 (MQ=60)
CGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCAT < SRR4302535.231495/94‑1 (MQ=60)
CGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCAT < SRR4302535.4128073/94‑1 (MQ=60)
CGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCAT < SRR4302535.2737469/94‑1 (MQ=60)
GACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATT < SRR4302535.924744/94‑1 (MQ=60)
CGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTT > SRR4302535.1648452/1‑94 (MQ=60)
CGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTT > SRR4302535.4186830/1‑94 (MQ=60)
CGCAGACCGGCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTT < SRR4302535.1359648/94‑1 (MQ=60)
GCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTG < SRR4302535.3588598/94‑1 (MQ=60)
CAGACTGTCGGAGGAACACACTGCGATAGTACGTACGATACCGCCGCCGAGCTGCTTCTGATCCTCCAGCACCAGACGCTCATTACCATTTTGC < SRR4302535.642187/94‑1 (MQ=60)
CAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGC > SRR4302535.1561121/1‑94 (MQ=60)
CAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGC > SRR4302535.835751/1‑94 (MQ=60)
CAGACCGTCGGAGGAACCCATGGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAGCCTCCAGCACCAGACGCTCATTACCATTTTGC < SRR4302535.948705/94‑1 (MQ=60)
AGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCA > SRR4302535.1910214/1‑94 (MQ=60)
GACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCAC < SRR4302535.2371552/94‑1 (MQ=60)
CCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCT > SRR4302535.4461819/1‑94 (MQ=60)
CGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTC > SRR4302535.4636664/1‑94 (MQ=60)
GTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCA > SRR4302535.1274177/1‑94 (MQ=60)
CGGAGAAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAG < SRR4302535.456952/94‑1 (MQ=60)
GGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGA > SRR4302535.4469489/1‑94 (MQ=60)
GAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAT < SRR4302535.1417855/94‑1 (MQ=60)
GAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAG < SRR4302535.4305318/94‑1 (MQ=60)
AGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGC < SRR4302535.3739955/94‑1 (MQ=60)
AGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGC < SRR4302535.3729559/94‑1 (MQ=60)
GAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCAT < SRR4302535.1081697/94‑1 (MQ=60)
AACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATC > SRR4302535.3732597/1‑94 (MQ=60)
AACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATC > SRR4302535.3534626/1‑94 (MQ=60)
ACCCATTGCGATGGTACGTACGATCCCGCCGCCGAGCTGCTGCTGACCCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCG < SRR4302535.1889335/94‑1 (MQ=60)
ACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCG > SRR4302535.4690903/1‑94 (MQ=60)
CCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGT > SRR4302535.279817/1‑94 (MQ=60)
CCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTA < SRR4302535.621111/94‑1 (MQ=60)
CATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGCACCTCCAGCACCAGACGCTCATTACCACTTTGCAACTCAAGAGCATCGTAC > SRR4302535.786136/1‑94 (MQ=60)
CATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTAC < SRR4302535.2595635/94‑1 (MQ=60)
CATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTAC > SRR4302535.1537868/1‑94 (MQ=60)
CATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTAC > SRR4302535.3398407/1‑94 (MQ=60)
ATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAATCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACA > SRR4302535.3330848/1‑94 (MQ=60)
ATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACA < SRR4302535.2306541/94‑1 (MQ=60)
TTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCTAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTTCAC < SRR4302535.2473846/94‑1 (MQ=60)
TGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACG < SRR4302535.4465665/94‑1 (MQ=60)
CGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCG > SRR4302535.4430770/1‑94 (MQ=60)
CGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCG > SRR4302535.3372461/1‑94 (MQ=60)
ATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCG > SRR4302535.1632317/1‑94 (MQ=60)
ATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCG < SRR4302535.253579/94‑1 (MQ=60)
GGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGT > SRR4302535.1981020/1‑94 (MQ=60)
ACGTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACG < SRR4302535.2307192/94‑1 (MQ=60)
GTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACTATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGA > SRR4302535.1146635/1‑94 (MQ=60)
GTACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACCCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGC > SRR4302535.3567029/1‑94 (MQ=60)
TACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCA > SRR4302535.101587/1‑94 (MQ=60)
ACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCAT > SRR4302535.3670533/1‑94 (MQ=60)
ACGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCAT < SRR4302535.989516/94‑1 (MQ=60)
CGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATC < SRR4302535.3831643/94‑1 (MQ=60)
CGATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATC > SRR4302535.4267914/1‑94 (MQ=60)
GATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCC > SRR4302535.4493472/1‑94 (MQ=60)
GATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCC > SRR4302535.4197427/1‑94 (MQ=60)
GATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCC > SRR4302535.319109/1‑94 (MQ=60)
ATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCT > SRR4302535.624944/1‑94 (MQ=60)
ATACCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCT > SRR4302535.2570178/1‑94 (MQ=60)
CCGCCGCGGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAG < SRR4302535.4700892/94‑1 (MQ=60)
CCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAG < SRR4302535.1609119/94‑1 (MQ=60)
CCGCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAG < SRR4302535.2081653/94‑1 (MQ=60)
GCCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGG > SRR4302535.2423042/1‑94 (MQ=60)
CCGCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGA < SRR4302535.3813474/94‑1 (MQ=60)
GCCGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAAT < SRR4302535.3679668/94‑1 (MQ=60)
CGAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTC > SRR4302535.1034685/1‑94 (MQ=60)
GAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCG < SRR4302535.3752144/94‑1 (MQ=60)
GAGCTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCG < SRR4302535.2911260/94‑1 (MQ=60)
CTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACG < SRR4302535.4654182/94‑1 (MQ=60)
CTGCTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACG > SRR4302535.293903/1‑94 (MQ=60)
CTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCA < SRR4302535.465500/94‑1 (MQ=60)
CTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCA > SRR4302535.3606558/1‑94 (MQ=60)
CTGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCA > SRR4302535.1403840/1‑94 (MQ=60)
TGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAA > SRR4302535.3133344/1‑94 (MQ=60)
TGCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAA < SRR4302535.2357857/94‑1 (MQ=60)
GCTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAAC < SRR4302535.2320829/94‑1 (MQ=60)
CTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACT < SRR4302535.990032/94‑1 (MQ=60)
CTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACT < SRR4302535.2911878/94‑1 (MQ=60)
CTGAACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACT > SRR4302535.4419950/1‑94 (MQ=60)
AACCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACG < SRR4302535.318470/94‑1 (MQ=60)
CCTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGC > SRR4302535.3158616/1‑94 (MQ=60)
CTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCG < SRR4302535.68775/94‑1 (MQ=60)
CTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCG > SRR4302535.2101215/1‑94 (MQ=60)
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TTCGAGGTCTTTTACATCCAGACCGCGACGCAGACCGTCGGAGGAACCCATTGCGATGGTACGTACGATACCGCCGCCGAGCTGCTGCTGAACTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCG > NC_000913/3914785‑3914971
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
