Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,941,734 |
A→G |
noncoding (409/2906 nt) |
rrlC → |
23S ribosomal RNA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,941,734 | 0 | A | G | 100.0%
| 600.8
/ NA
| 224 | noncoding (409/2906 nt) | rrlC | 23S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (127/97); total (127/97) |
Only 100 of 235 total aligned reads displayed.
GATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAG > NC_000913/3941644‑3941819
|
gATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgggggg > 1:4021374/1‑93 (MQ=25)
aTACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGAGACGTGGTATCCTGCATGAATATggggggg > 2:3860834/1‑93 (MQ=11)
aTACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATggggggg > 1:1003410/1‑93 (MQ=25)
cAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGAcc > 1:1707448/1‑93 (MQ=255)
aGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCa > 1:2548844/1‑93 (MQ=255)
aGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCa < 2:3406201/93‑1 (MQ=255)
aGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCa < 1:1490614/93‑1 (MQ=255)
aGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGGATCCTGTCTGAATATGGGGGGGACCa > 2:3490481/1‑93 (MQ=255)
ggTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCAtc < 2:390760/93‑1 (MQ=255)
cAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCa > 2:2093441/1‑93 (MQ=255)
aGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCaa > 1:4567562/1‑93 (MQ=255)
cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGc < 2:1722557/93‑1 (MQ=255)
cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGc > 1:3080370/1‑93 (MQ=255)
cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGc < 2:2577126/93‑1 (MQ=255)
cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGc < 1:4047154/93‑1 (MQ=255)
cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGc > 2:1143109/1‑93 (MQ=255)
cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGc > 2:2897219/1‑93 (MQ=255)
cccGTACACAAAAATGCACATATTGGGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGCCCATCCTCCAAGGc < 1:695895/93‑1 (MQ=255)
ccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCTTCCAAGGCt > 1:3427945/1‑93 (MQ=255)
cGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTa > 1:4505561/1‑93 (MQ=255)
tACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTaaa < 2:32736/93‑1 (MQ=255)
tACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTaaa > 1:910937/1‑93 (MQ=255)
tACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTaaa > 2:441797/1‑93 (MQ=255)
acacAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAAt < 1:3517312/93‑1 (MQ=255)
cacaAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATa < 1:1676546/93‑1 (MQ=255)
acaAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATAc > 1:3223730/1‑93 (MQ=255)
caAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACt > 2:2348306/1‑93 (MQ=255)
caAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACt > 1:1909763/1‑93 (MQ=255)
aaaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTc > 2:3101983/1‑93 (MQ=255)
aaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTcc > 1:980858/1‑93 (MQ=255)
aaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctg < 2:1452451/93‑1 (MQ=255)
aTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctga > 1:1352202/1‑93 (MQ=255)
tGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctgac > 1:1500385/1‑93 (MQ=255)
tGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctgac < 2:3733759/93‑1 (MQ=255)
gCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATGCTCctgact < 2:243271/93‑1 (MQ=255)
gCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctgact > 2:3995417/1‑93 (MQ=255)
gCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctgact > 2:1202123/1‑93 (MQ=255)
gCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctgact > 1:1166976/1‑93 (MQ=255)
gCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctgact > 1:884789/1‑93 (MQ=255)
acaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctgactga > 2:138890/1‑93 (MQ=255)
acaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctgactga < 1:502925/93‑1 (MQ=255)
atatTGTGAGCTCGATTAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGAcc < 1:4548445/93‑1 (MQ=255)
atatTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGAcc < 2:1903075/93‑1 (MQ=255)
atTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGa < 2:2260943/93‑1 (MQ=21)
atTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGa < 1:1148889/93‑1 (MQ=25)
atTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGa < 1:534246/93‑1 (MQ=21)
gtgAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAg > 1:663194/1‑93 (MQ=18)
gtgAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAg < 1:806901/93‑1 (MQ=18)
gtgAGCTCGATGAGTAGAGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAg < 1:4069199/93‑1 (MQ=16)
gAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGCCTGACCGATAGTg < 2:4603961/93‑1 (MQ=12)
gCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGaa > 1:2206846/1‑93 (MQ=18)
gCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGaa > 2:1768828/1‑93 (MQ=18)
cGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCa < 1:2888911/93‑1 (MQ=17)
cGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCa < 2:3145299/93‑1 (MQ=17)
gATGAGTAGGGCGGGCCACGTTGTAGCCTGCCTGAATCTGGGGGGGACCATCCTCCAACGCTAAATACTCCTCACTGTCCGAGAGTTAACCAg > 2:3200620/1‑93 (MQ=11)
gATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAg < 1:566689/93‑1 (MQ=18)
aTGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGCCCGATAGTGAACCAGt > 2:4278974/1‑93 (MQ=16)
tGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTa < 2:4654058/93‑1 (MQ=17)
gAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTAc < 2:3959558/93‑1 (MQ=18)
gAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTAc > 2:2191333/1‑93 (MQ=18)
gcaGGGCGGGACACGTGGTATCCTGTCTGGATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCg > 2:4367807/3‑93 (MQ=255)
gTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCg > 2:2526284/1‑93 (MQ=18)
gTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCg > 2:1798732/1‑93 (MQ=18)
gaGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGt < 2:1754531/92‑1 (MQ=18)
aGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCTATAGTGAACCAGTACCGTg < 2:4527321/93‑1 (MQ=16)
ggCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAg > 1:2301786/1‑93 (MQ=18)
gCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAgg > 2:2813868/1‑93 (MQ=18)
gCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAgg > 1:3600631/1‑93 (MQ=18)
cGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAggg < 1:292530/93‑1 (MQ=18)
gACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGaaa < 1:2691867/93‑1 (MQ=18)
cacGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAgg < 2:1125961/93‑1 (MQ=18)
cacGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAgg < 1:2038734/93‑1 (MQ=18)
cGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCg > 2:2461268/1‑93 (MQ=17)
gTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCCAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGa < 1:3199617/93‑1 (MQ=255)
tGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaa > 1:2820089/1‑93 (MQ=17)
tGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaa > 2:848180/1‑93 (MQ=17)
ggTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaaa > 2:4383271/1‑93 (MQ=18)
gTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaaaa < 1:2375540/93‑1 (MQ=18)
gTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaaaa > 2:826202/1‑93 (MQ=17)
gTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaaaa > 1:2014500/1‑93 (MQ=17)
gTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaaaa > 2:4147148/1‑93 (MQ=18)
tATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAg < 1:4286733/93‑1 (MQ=18)
tATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAg > 2:2634184/1‑93 (MQ=17)
aTCCTGTCTGAATATGGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGa > 1:4181236/1‑93 (MQ=12)
aTCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGa > 1:2130539/1‑93 (MQ=18)
tCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGaa < 1:4612528/93‑1 (MQ=18)
tCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGaa < 1:446439/93‑1 (MQ=18)
tCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGaa < 1:1771247/93‑1 (MQ=18)
ccTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAc > 1:3150633/1‑93 (MQ=18)
gTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAcccc < 1:4268552/93‑1 (MQ=18)
gTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAcccc > 1:1246478/1‑93 (MQ=17)
tCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCg > 2:2768418/1‑93 (MQ=17)
tCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCg > 2:1492321/1‑93 (MQ=17)
tCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCg > 2:2890814/1‑93 (MQ=17)
cTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCgg < 1:3277409/93‑1 (MQ=18)
tGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGc < 1:136358/93‑1 (MQ=18)
gAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCg < 2:4116586/93‑1 (MQ=18)
aaTATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGa < 2:1640162/93‑1 (MQ=18)
atatGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAg > 1:1636381/1‑93 (MQ=14)
atatGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAg > 2:1607591/1‑93 (MQ=14)
|
GATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAG > NC_000913/3941644‑3941819
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGG > NC_000913/3941643‑3941820
|
CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG < SRR4302535.3850068/94‑1 (MQ=10)
CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG > SRR4302535.4048890/1‑94 (MQ=10)
CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG < SRR4302535.4367864/94‑1 (MQ=10)
CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG < SRR4302535.1819487/94‑1 (MQ=10)
CGATACAGGGTGACAGCCCCGCACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG > SRR4302535.517771/1‑94 (MQ=9)
GATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGG > SRR4302535.1010534/1‑94 (MQ=10)
ACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACC > SRR4302535.1719793/1‑94 (MQ=23)
CAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCA > SRR4302535.1816734/1‑94 (MQ=25)
CAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCA > SRR4302535.2567186/1‑94 (MQ=25)
AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCAT > SRR4302535.816586/1‑94 (MQ=28)
AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCAT > SRR4302535.3315973/1‑94 (MQ=28)
AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCAT < SRR4302535.1501318/94‑1 (MQ=28)
AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCAT > SRR4302535.4066062/1‑94 (MQ=28)
CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAA > SRR4302535.4598717/1‑94 (MQ=33)
AGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAG > SRR4302535.2631572/1‑94 (MQ=33)
CCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGC > SRR4302535.3101847/1‑94 (MQ=33)
CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGTGGGGACCATCCTCCAAGGCT > SRR4302535.4628427/1‑94 (MQ=19)
CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCTTCCAAGGCT > SRR4302535.3451773/1‑94 (MQ=31)
CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCT < SRR4302535.4074859/94‑1 (MQ=33)
CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCT < SRR4302535.968976/94‑1 (MQ=33)
CCCGTACACAAAAATGCACATATTGGGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGCCCATCCTCCAAGGCT < SRR4302535.700776/94‑1 (MQ=30)
CCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTA > SRR4302535.161248/1‑94 (MQ=33)
CCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTA > SRR4302535.4536492/1‑94 (MQ=33)
GTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAA > SRR4302535.2930947/1‑94 (MQ=33)
GTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAA > SRR4302535.917414/1‑94 (MQ=33)
TACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAAT > SRR4302535.1382484/1‑94 (MQ=33)
TACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAAT > SRR4302535.4553036/1‑94 (MQ=33)
TACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAAT < SRR4302535.581675/94‑1 (MQ=33)
ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATA < SRR4302535.3541748/94‑1 (MQ=33)
ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATA > SRR4302535.3432902/1‑94 (MQ=33)
CACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATAC < SRR4302535.1688686/94‑1 (MQ=33)
CACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATAC > SRR4302535.3246078/1‑94 (MQ=33)
CACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATAC > SRR4302535.565701/1‑94 (MQ=33)
ACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACT < SRR4302535.1706637/94‑1 (MQ=33)
ACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACT > SRR4302535.1923529/1‑94 (MQ=33)
AAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCC > SRR4302535.987827/1‑94 (MQ=33)
AAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCC > SRR4302535.2185682/1‑94 (MQ=33)
AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCT > SRR4302535.3277098/1‑94 (MQ=33)
AATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGA > SRR4302535.1361880/1‑94 (MQ=33)
ATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGAC < SRR4302535.2126147/94‑1 (MQ=33)
ATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGAC > SRR4302535.1511179/1‑94 (MQ=33)
TGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACT > SRR4302535.1175308/1‑94 (MQ=30)
TGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACT > SRR4302535.891050/1‑94 (MQ=30)
GCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTG > SRR4302535.3462471/1‑94 (MQ=28)
ACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGAC > SRR4302535.1928006/1‑94 (MQ=23)
ACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGAC > SRR4302535.1319847/1‑94 (MQ=23)
ACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGAC < SRR4302535.506441/94‑1 (MQ=23)
CATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACC < SRR4302535.4504255/94‑1 (MQ=20)
ATATTGTGAGCTCGATTAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCG < SRR4302535.4579542/94‑1 (MQ=9)
ATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCG < SRR4302535.1253019/94‑1 (MQ=10)
ATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCG < SRR4302535.2472357/94‑1 (MQ=10)
ATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCG > SRR4302535.1043256/1‑94 (MQ=10)
ATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGAT < SRR4302535.537982/94‑1 (MQ=5)
ATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGAT < SRR4302535.2052875/94‑1 (MQ=5)
ATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGAT > SRR4302535.3727348/1‑94 (MQ=5)
ATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGAT < SRR4302535.1157072/94‑1 (MQ=5)
TGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATGCTCCTGACTGACCGATAG < SRR4302535.787553/94‑1 (MQ=0)
TGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAG > SRR4302535.667826/1‑94 (MQ=0)
GTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGT < SRR4302535.812559/94‑1 (MQ=0)
GTGAGCTCGATGAGTAGAGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGT < SRR4302535.4097047/94‑1 (MQ=0)
TGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTG < SRR4302535.3813354/94‑1 (MQ=0)
AGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAA > SRR4302535.2222565/1‑94 (MQ=0)
CTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACC < SRR4302535.1206748/94‑1 (MQ=0)
TCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCA > SRR4302535.2370501/1‑94 (MQ=0)
CGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAG < SRR4302535.2909348/94‑1 (MQ=0)
GATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGT < SRR4302535.570657/94‑1 (MQ=0)
ATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTA > SRR4302535.3239226/1‑94 (MQ=0)
TGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTAC < SRR4302535.4652558/94‑1 (MQ=0)
TGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTAC < SRR4302535.4250677/94‑1 (MQ=0)
GAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACC < SRR4302535.3556039/94‑1 (MQ=0)
AGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCG > SRR4302535.4679892/1‑94 (MQ=0)
AGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCG < SRR4302535.1650530/94‑1 (MQ=0)
GTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGG > SRR4302535.1658594/1‑94 (MQ=0)
AGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGA > SRR4302535.4360452/1‑94 (MQ=0)
GGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAG > SRR4302535.2318257/1‑94 (MQ=0)
GGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAG < SRR4302535.292483/94‑1 (MQ=0)
GGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAG > SRR4302535.674499/1‑94 (MQ=0)
GGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGG > SRR4302535.3625616/1‑94 (MQ=0)
GGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGGGAACCAGTACCGCGAGG > SRR4302535.3087092/1‑94 (MQ=0)
GCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGG < SRR4302535.1771441/94‑1 (MQ=0)
CGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGA < SRR4302535.294577/94‑1 (MQ=0)
GACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAG < SRR4302535.2711109/94‑1 (MQ=0)
GACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAG < SRR4302535.4127607/94‑1 (MQ=0)
GACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAG < SRR4302535.2694944/94‑1 (MQ=0)
ACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGG > SRR4302535.902104/1‑94 (MQ=0)
CACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGC < SRR4302535.858796/94‑1 (MQ=0)
CACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGC < SRR4302535.2053414/94‑1 (MQ=0)
tgttttatcctTGTCTGAACATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCG < SRR4302535.3666035/83‑1 (MQ=0)
CGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGA > SRR4302535.4303388/1‑94 (MQ=0)
GTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAA > SRR4302535.2840118/1‑94 (MQ=0)
GTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAA > SRR4302535.2106900/1‑94 (MQ=0)
GTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCCAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAA < SRR4302535.3221768/94‑1 (MQ=0)
TGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAA > SRR4302535.1794399/1‑94 (MQ=0)
GGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATATTGAACCGAGACCGGGGGGGAAAGGCGAAAA > SRR4302535.1506677/1‑94 (MQ=0)
GGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAA > SRR4302535.2742159/1‑94 (MQ=0)
GGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAA > SRR4302535.2029010/1‑94 (MQ=0)
GTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAG < SRR4302535.2392607/94‑1 (MQ=0)
GTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAG < SRR4302535.1005189/94‑1 (MQ=0)
TATCCTGTCTGAATATGGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGA > SRR4302535.4209851/1‑94 (MQ=0)
TATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGA > SRR4302535.2145898/1‑94 (MQ=0)
TATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGA < SRR4302535.4316057/94‑1 (MQ=0)
TATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGA > SRR4302535.4586233/1‑94 (MQ=0)
ATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAA < SRR4302535.1173950/94‑1 (MQ=0)
ATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAA < SRR4302535.411604/94‑1 (MQ=0)
ATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAA > SRR4302535.1465500/1‑94 (MQ=0)
TCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAC < SRR4302535.619835/94‑1 (MQ=0)
TCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAC < SRR4302535.449562/94‑1 (MQ=0)
TCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAC > SRR4302535.3172530/1‑94 (MQ=0)
TCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAC < SRR4302535.1784082/94‑1 (MQ=0)
TCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAC < SRR4302535.4643866/94‑1 (MQ=0)
CCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACC < SRR4302535.2319523/94‑1 (MQ=0)
CCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACC > SRR4302535.4086879/1‑94 (MQ=0)
CCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACC > SRR4302535.3196425/1‑94 (MQ=0)
CCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACC > SRR4302535.3193730/1‑94 (MQ=0)
CTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCC > SRR4302535.286041/1‑94 (MQ=0)
TGTCTGAATATGGGGGGGACTATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCC < SRR4302535.3148822/94‑1 (MQ=0)
TGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCC > SRR4302535.1255372/1‑94 (MQ=0)
TGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCC < SRR4302535.4437195/94‑1 (MQ=0)
TGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCC < SRR4302535.1367784/94‑1 (MQ=0)
GTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCG < SRR4302535.4297778/94‑1 (MQ=0)
CTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGC < SRR4302535.3300177/94‑1 (MQ=0)
TGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCG < SRR4302535.137310/94‑1 (MQ=0)
AATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAG > SRR4302535.1648204/1‑94 (MQ=0)
ATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGG < SRR4302535.4578586/94‑1 (MQ=0)
|
CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGG > NC_000913/3941643‑3941820
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
