Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,961,966 |
A→G |
intergenic (‑122/+14) |
gppA ← / ← rhlB |
guanosine pentaphosphatase/putative ATP‑dependent RNA helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,961,966 | 0 | A | G | 100.0%
| 919.7
/ NA
| 285 | intergenic (‑122/+14) | gppA/rhlB | guanosine pentaphosphatase/putative ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (151/134); total (151/134) |
Only 100 of 290 total aligned reads displayed.
GCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTATGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGC > NC_000913/3961876‑3962055
|
cTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGa < 2:4621986/93‑1 (MQ=255)
tGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGAc > 1:2495013/1‑93 (MQ=255)
tGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGAc > 2:450093/1‑93 (MQ=255)
aTTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAtt > 2:1079650/1‑93 (MQ=255)
ttCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAttt < 2:3777028/93‑1 (MQ=255)
tCTTTCGCCTGAATCACTTACGACACTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAtttt < 2:4184395/93‑1 (MQ=37)
tCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAtttt < 2:3689073/93‑1 (MQ=255)
tttCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAtttttt > 2:587095/1‑93 (MQ=255)
tttCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAtttttt > 1:1306993/1‑93 (MQ=255)
ttCACCTCAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTttta < 1:1518682/93‑1 (MQ=255)
ccACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttat > 1:1965227/2‑93 (MQ=255)
aCCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttattt > 2:4002319/1‑93 (MQ=255)
aCCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttattt < 1:2679439/93‑1 (MQ=255)
cTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTaa < 1:3116111/93‑1 (MQ=255)
cTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTaa < 2:4526917/93‑1 (MQ=255)
cTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGCGACATTTTTTATTTaa > 1:2131082/1‑93 (MQ=255)
tGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAc > 2:2378262/1‑93 (MQ=255)
tGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTACCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAc > 1:3295034/1‑93 (MQ=255)
gAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAcc < 1:2395418/93‑1 (MQ=255)
gAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAcc < 1:287254/93‑1 (MQ=255)
aaTCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCt < 1:403/93‑1 (MQ=255)
tCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGa < 1:3717789/93‑1 (MQ=255)
aCTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAac < 2:552772/93‑1 (MQ=255)
ttACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAacga < 1:4541327/93‑1 (MQ=255)
ttACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAacga > 1:1618556/1‑93 (MQ=255)
tactacAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAacgac > 2:223638/1‑93 (MQ=255)
tactacAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAacgac < 1:1136091/93‑1 (MQ=255)
ctacAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAacgacga < 1:3327273/93‑1 (MQ=255)
acAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAacgacgacg > 1:3520003/1‑93 (MQ=255)
acAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAacgacgacg > 1:2786970/1‑93 (MQ=255)
cAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAAcgacgacga < 2:964605/93‑1 (MQ=255)
cAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAAcgacgacga < 2:2949303/93‑1 (MQ=255)
gTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGAtt < 2:3482967/93‑1 (MQ=255)
gTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGAtt < 1:2896021/93‑1 (MQ=255)
tAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTa < 1:1796070/93‑1 (MQ=255)
tAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTa < 1:3877614/93‑1 (MQ=255)
aaGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAc < 1:3215564/93‑1 (MQ=255)
aaGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAc < 2:4053770/93‑1 (MQ=255)
aGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAcg > 1:499617/1‑93 (MQ=255)
gCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAcgc > 2:854432/1‑93 (MQ=255)
cTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAcgcg > 2:2451225/1‑93 (MQ=255)
cTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAcgcg > 2:2305929/1‑93 (MQ=255)
tCACCGGGATTCATTCTCTTGTCATCTTGATACGGTTTCAATGATTTTGAGTGTGCTATTTTTTATTTAACCTGAACGACGACGATTACGCgg > 2:1523512/1‑93 (MQ=255)
cATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGa < 2:3274872/93‑1 (MQ=255)
cATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGa < 2:274415/93‑1 (MQ=255)
aTCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAg < 2:3086244/93‑1 (MQ=255)
aTCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAg > 2:715161/1‑93 (MQ=255)
cGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAgcg > 1:1002800/1‑93 (MQ=255)
ggATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGcc > 1:1585193/1‑93 (MQ=255)
ggATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGcc > 2:1560103/1‑93 (MQ=255)
attcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAg > 1:2247222/1‑93 (MQ=255)
attcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAg > 1:1356115/1‑93 (MQ=255)
attcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAg > 2:2020507/1‑93 (MQ=255)
ttcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGt > 2:4222389/1‑93 (MQ=255)
tcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTa < 1:929676/93‑1 (MQ=255)
cattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTac > 1:2701597/1‑93 (MQ=255)
attcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTACCCTGAACGACGACGATTACGCGGAGCGCCAGTacg < 2:2470765/93‑1 (MQ=255)
attcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacg > 2:1245693/1‑93 (MQ=255)
ttcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacgc > 1:429697/1‑92 (MQ=255)
ttcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacga < 2:3067792/93‑1 (MQ=255)
ttcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacga > 1:3405847/1‑93 (MQ=255)
tctcTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacgac < 2:3723641/93‑1 (MQ=255)
ctctTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacgacg > 1:1937248/1‑93 (MQ=255)
ctctTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacgacg > 1:1175765/1‑93 (MQ=255)
ttGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCgg > 2:3895613/1‑93 (MQ=255)
tGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGa < 1:4550859/93‑1 (MQ=255)
gCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGAc > 2:3649545/1‑93 (MQ=255)
gCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGAc > 2:3457608/1‑93 (MQ=255)
ccATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGAcc > 1:3661691/1‑93 (MQ=255)
cATCTTGATACAGTTTGAATTATTTTGAGTGTGACATTTGTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCa < 1:707749/93‑1 (MQ=255)
aTCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAt > 2:4261473/1‑93 (MQ=255)
aTCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAt > 1:4310307/1‑93 (MQ=255)
aTCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAt > 1:257755/1‑93 (MQ=255)
tCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAtt > 1:831760/1‑93 (MQ=255)
cTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTg > 2:1441399/1‑93 (MQ=255)
ttGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGc > 1:2973034/1‑93 (MQ=255)
gATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCt > 2:251759/1‑93 (MQ=255)
cAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTgc < 2:2213280/93‑1 (MQ=255)
gTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTgcgg > 1:1983398/1‑92 (MQ=255)
ttGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCgg < 1:1831707/93‑1 (MQ=255)
tGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCggg > 2:3208963/1‑93 (MQ=255)
taaTGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGgc < 1:3828358/92‑1 (MQ=255)
gAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGgc > 2:1971042/1‑93 (MQ=255)
aTGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGgcgc > 1:4079497/1‑93 (MQ=255)
aTGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGgcgc > 2:3941873/1‑93 (MQ=255)
tGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGcgcg < 2:506620/93‑1 (MQ=255)
gATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGt > 2:778651/1‑93 (MQ=255)
aTTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTg > 2:3870591/1‑93 (MQ=255)
aTTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTg < 1:4351403/93‑1 (MQ=255)
ttttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGa > 1:3139706/1‑93 (MQ=255)
ttttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGa < 1:2558793/93‑1 (MQ=255)
ttttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGa < 2:1872978/93‑1 (MQ=255)
ttttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGa > 2:1655559/1‑93 (MQ=255)
tttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAg < 2:1003650/93‑1 (MQ=255)
ttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAgg > 2:4464878/1‑93 (MQ=255)
ttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAgg < 2:2106629/93‑1 (MQ=255)
ttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAgg < 1:419824/93‑1 (MQ=255)
tGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGgc < 1:1489688/93‑1 (MQ=255)
tGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGgc > 2:1132740/1‑93 (MQ=255)
gAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGgcg > 2:4309189/1‑93 (MQ=255)
|
GCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTATGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGC > NC_000913/3961876‑3962055
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGGCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTATGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCAGCG > NC_000913/3961873‑3962059
|
TTGGCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTG < SRR4302535.75068/94‑1 (MQ=60)
TTGGCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTG < SRR4302535.195262/94‑1 (MQ=60)
TGGCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGT < SRR4302535.346491/94‑1 (MQ=60)
TGGCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGT < SRR4302535.1217246/94‑1 (MQ=60)
GGCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTG > SRR4302535.1662291/1‑94 (MQ=60)
CTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGAC > SRR4302535.2513015/1‑94 (MQ=60)
CTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGAC < SRR4302535.3803840/94‑1 (MQ=60)
CTGCATTCTTTCACCTGAATCACTTACGACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGAC < SRR4302535.1480369/94‑1 (MQ=60)
CATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATT > SRR4302535.2886149/1‑94 (MQ=60)
CATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATT < SRR4302535.2880972/94‑1 (MQ=60)
TTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTT > SRR4302535.3877484/1‑94 (MQ=60)
TTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTT > SRR4302535.2556645/1‑94 (MQ=60)
TTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTT < SRR4302535.4348339/94‑1 (MQ=60)
TCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTT < SRR4302535.4581915/94‑1 (MQ=60)
TCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTT < SRR4302535.1819706/94‑1 (MQ=60)
TCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTT < SRR4302535.43424/94‑1 (MQ=60)
CTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTT < SRR4302535.1671999/94‑1 (MQ=60)
CTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTT > SRR4302535.1316328/1‑94 (MQ=60)
TTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTAT > SRR4302535.3216412/1‑94 (MQ=60)
TTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTAT < SRR4302535.1192044/94‑1 (MQ=60)
TTCACCTCAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTAT < SRR4302535.1529619/94‑1 (MQ=60)
TCCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTAT > SRR4302535.1979392/1‑94 (MQ=60)
TCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATT < SRR4302535.4073338/94‑1 (MQ=60)
CACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTT < SRR4302535.1347954/94‑1 (MQ=60)
CACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTT > SRR4302535.1523871/1‑94 (MQ=60)
ACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTA < SRR4302535.1619460/94‑1 (MQ=60)
ACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTA < SRR4302535.2698607/94‑1 (MQ=60)
ACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTA > SRR4302535.857424/1‑94 (MQ=60)
CCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAA > SRR4302535.3515613/1‑94 (MQ=60)
CCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGCGACATTTTTTATTTAA > SRR4302535.2146446/1‑94 (MQ=60)
CTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAC > SRR4302535.3021367/1‑94 (MQ=60)
CTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAC < SRR4302535.3137804/94‑1 (MQ=60)
CTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAC > SRR4302535.3796032/1‑94 (MQ=60)
CTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTACCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAC > SRR4302535.3317940/1‑94 (MQ=60)
GAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCT < SRR4302535.289267/94‑1 (MQ=60)
GAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCT < SRR4302535.3314537/94‑1 (MQ=60)
GAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCT < SRR4302535.2412635/94‑1 (MQ=60)
GAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCT < SRR4302535.4422674/94‑1 (MQ=60)
AATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTG < SRR4302535.408/94‑1 (MQ=60)
AATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTG < SRR4302535.3563102/94‑1 (MQ=60)
ATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGA > SRR4302535.2718416/1‑94 (MQ=60)
TCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAA < SRR4302535.3743550/94‑1 (MQ=60)
TCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAA < SRR4302535.2204191/94‑1 (MQ=60)
CACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAAC > SRR4302535.196987/1‑94 (MQ=60)
ACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTTACATTTTTTATTTAACCTGAACG > SRR4302535.3714560/1‑94 (MQ=60)
CTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGA > SRR4302535.667316/1‑94 (MQ=60)
CTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGA > SRR4302535.1630228/1‑94 (MQ=60)
CTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGA > SRR4302535.4656010/1‑94 (MQ=60)
TTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGAC < SRR4302535.4572386/94‑1 (MQ=60)
TACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGGATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACG > SRR4302535.4239415/1‑94 (MQ=60)
TACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACG < SRR4302535.1144191/94‑1 (MQ=60)
CTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGAC < SRR4302535.3350425/94‑1 (MQ=60)
TACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACG < SRR4302535.976175/94‑1 (MQ=60)
TACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACG > SRR4302535.2806801/1‑94 (MQ=60)
TACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACG > SRR4302535.3544454/1‑94 (MQ=60)
TACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACCACGACG > SRR4302535.116044/1‑94 (MQ=60)
ACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGA > SRR4302535.4236429/1‑94 (MQ=60)
GTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTA < SRR4302535.2916502/94‑1 (MQ=60)
TAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAC < SRR4302535.3904243/94‑1 (MQ=60)
TAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAC < SRR4302535.1809055/94‑1 (MQ=60)
TAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAC < SRR4302535.3979660/94‑1 (MQ=60)
TAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAC < SRR4302535.2584675/94‑1 (MQ=60)
TAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAC > SRR4302535.3740647/1‑94 (MQ=60)
AAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACG < SRR4302535.3237833/94‑1 (MQ=60)
AAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACG < SRR4302535.2513457/94‑1 (MQ=60)
AAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACG > SRR4302535.503119/1‑94 (MQ=60)
AAGCTCATCGGGATTCATTCTCTCGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACG < SRR4302535.2493339/94‑1 (MQ=60)
AGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGC < SRR4302535.2768885/94‑1 (MQ=60)
CTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGG < SRR4302535.3568015/94‑1 (MQ=60)
TCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGA > SRR4302535.618098/1‑94 (MQ=60)
ATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGC > SRR4302535.1560223/1‑94 (MQ=60)
ATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGC < SRR4302535.223653/94‑1 (MQ=60)
TCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCG > SRR4302535.1009920/1‑94 (MQ=60)
CGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAGCGACGACGATTACGCGGAGCGC > SRR4302535.4576129/1‑94 (MQ=60)
GGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCC > SRR4302535.1596631/1‑94 (MQ=60)
GGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCC > SRR4302535.1816186/1‑94 (MQ=60)
GGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCA > SRR4302535.796022/1‑94 (MQ=60)
GATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAG > SRR4302535.1365820/1‑94 (MQ=60)
GATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAG > SRR4302535.2263218/1‑94 (MQ=60)
ATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGT > SRR4302535.849145/1‑94 (MQ=60)
TTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAGCCTGAACGACGACGATTACGCGGAGCGCCAGTA > SRR4302535.1005475/1‑94 (MQ=60)
TTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTA > SRR4302535.1379626/1‑94 (MQ=60)
TTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTA > SRR4302535.1848253/1‑94 (MQ=60)
TTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTA > SRR4302535.3150448/1‑94 (MQ=60)
TCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTAC < SRR4302535.936253/94‑1 (MQ=60)
TCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTAC > SRR4302535.2720898/1‑94 (MQ=60)
TCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTAC < SRR4302535.3203144/94‑1 (MQ=60)
CATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACG < SRR4302535.4361816/94‑1 (MQ=60)
CATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACG > SRR4302535.2427471/1‑94 (MQ=60)
CATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACG < SRR4302535.3138611/94‑1 (MQ=60)
ATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGC > SRR4302535.432685/1‑94 (MQ=60)
ATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGA > SRR4302535.3429549/1‑94 (MQ=60)
TCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACG > SRR4302535.1951195/1‑94 (MQ=60)
TCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACG > SRR4302535.1184157/1‑94 (MQ=60)
TCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACG < SRR4302535.3376958/94‑1 (MQ=60)
TCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCG < SRR4302535.1163857/94‑1 (MQ=60)
CTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGG > SRR4302535.4106116/1‑94 (MQ=60)
CTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGG > SRR4302535.1264994/1‑94 (MQ=60)
TGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGAC < SRR4302535.1121209/94‑1 (MQ=60)
TGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGAC < SRR4302535.1564817/94‑1 (MQ=60)
TGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGAC < SRR4302535.4581964/94‑1 (MQ=60)
GCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACC > SRR4302535.3687040/1‑94 (MQ=60)
GCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACC < SRR4302535.3975355/94‑1 (MQ=60)
CCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCA < SRR4302535.4485273/94‑1 (MQ=60)
CATCTTGATACAGTTTGAATTATTTTGAGTGTGACATTTGTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAT < SRR4302535.712716/94‑1 (MQ=60)
CATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAT > SRR4302535.4339791/1‑94 (MQ=60)
CATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAT > SRR4302535.259534/1‑94 (MQ=60)
ATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATT > SRR4302535.2759586/1‑94 (MQ=60)
ATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATT < SRR4302535.2894068/94‑1 (MQ=60)
ATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATT < SRR4302535.2011580/94‑1 (MQ=60)
ATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATT > SRR4302535.2351041/1‑94 (MQ=60)
ATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATT > SRR4302535.837588/1‑94 (MQ=60)
CTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGC > SRR4302535.289993/1‑94 (MQ=60)
CTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGC > SRR4302535.2993903/1‑94 (MQ=60)
CTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGC < SRR4302535.2665922/94‑1 (MQ=60)
CTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGC > SRR4302535.2333298/1‑94 (MQ=60)
TTGATACAGTTTGAATGATTTTAAGTGTGACATTTTTTCTTTAACCTGAACGACGACGATTACGCGCAGCGCCAGTACGACGTGGACCATTGCC > SRR4302535.1984928/1‑94 (MQ=60)
TGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCT > SRR4302535.2926300/1‑94 (MQ=60)
ATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGT > SRR4302535.3344202/1‑94 (MQ=60)
TACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTG < SRR4302535.1618038/94‑1 (MQ=60)
TACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTG < SRR4302535.743545/94‑1 (MQ=60)
ACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGC > SRR4302535.1361690/1‑94 (MQ=60)
ACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGC < SRR4302535.419613/94‑1 (MQ=60)
ACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGC < SRR4302535.2027932/94‑1 (MQ=60)
CAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTACCCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCG < SRR4302535.3332658/94‑1 (MQ=60)
CAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCG < SRR4302535.4112880/94‑1 (MQ=60)
CAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCG > SRR4302535.2948850/1‑94 (MQ=60)
AGTTTGAATGATTTTGAGTGTGGCATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGC < SRR4302535.3461220/94‑1 (MQ=60)
AGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGG > SRR4302535.1997679/1‑94 (MQ=60)
GTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCG > SRR4302535.2592943/1‑94 (MQ=60)
TTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGG < SRR4302535.1844924/94‑1 (MQ=60)
TAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCG < SRR4302535.3854766/94‑1 (MQ=60)
GAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCG > SRR4302535.1511140/1‑94 (MQ=60)
GAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCG > SRR4302535.3245931/1‑94 (MQ=60)
AATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGC > SRR4302535.1985215/1‑94 (MQ=60)
AATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGC > SRR4302535.4107403/1‑94 (MQ=60)
ATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGA < SRR4302535.4381176/94‑1 (MQ=60)
ATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGA > SRR4302535.3161552/1‑94 (MQ=60)
ATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGA > SRR4302535.1967856/1‑94 (MQ=60)
TTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAG < SRR4302535.2577212/94‑1 (MQ=60)
TTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAG < SRR4302535.3875640/94‑1 (MQ=60)
TTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGG < SRR4302535.3130385/94‑1 (MQ=60)
TTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGG < SRR4302535.2630919/94‑1 (MQ=60)
TTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGC < SRR4302535.422760/94‑1 (MQ=60)
TGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCG < SRR4302535.1500380/94‑1 (MQ=60)
GAGTGTGACAGTTTTTATTTAACCAGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAATGCCTGTGCGCGGGCGCGTGAGGCGC > SRR4302535.4715975/1‑94 (MQ=60)
AGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCA > SRR4302535.836886/1‑94 (MQ=60)
AGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCA > SRR4302535.2402468/1‑94 (MQ=60)
GTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCAGCG < SRR4302535.65727/94‑1 (MQ=60)
GTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCAGCG > SRR4302535.2859083/1‑94 (MQ=60)
GTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCAGCG < SRR4302535.1939238/94‑1 (MQ=60)
GTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCAGCG < SRR4302535.3147570/94‑1 (MQ=60)
GTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCAGCG > SRR4302535.4047876/1‑94 (MQ=60)
GTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCAGCG > SRR4302535.2610739/1‑94 (MQ=60)
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TTGGCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTATGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGCAGCG > NC_000913/3961873‑3962059
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
