Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,980,954 |
A→G |
L128L (TTA→TTG) |
aslB → |
putative arylsulfatase regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,980,954 | 0 | A | G | 100.0%
| 769.7
/ NA
| 244 | L128L (TTA→TTG) | aslB | putative arylsulfatase regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (111/133); total (111/133) |
Only 100 of 251 total aligned reads displayed.
GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC > NC_000913/3980864‑3981043
|
gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTc < 2:160719/93‑1 (MQ=255)
gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTc < 1:1444298/93‑1 (MQ=255)
aaGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCg < 1:2229688/93‑1 (MQ=255)
aGATAAGTAACAGCTTCCAGACTAGCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGc < 2:3894882/93‑1 (MQ=255)
aGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGc < 1:3603993/93‑1 (MQ=255)
aGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGc < 1:3831734/93‑1 (MQ=255)
aGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGc > 2:2198436/1‑93 (MQ=255)
tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTgg > 1:1603603/1‑93 (MQ=255)
aaGTAACATCATCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGa < 1:350646/93‑1 (MQ=255)
aGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAt > 2:4424794/1‑93 (MQ=255)
gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGATGGTTg > 2:1654734/1‑93 (MQ=255)
gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATg < 2:177751/93‑1 (MQ=255)
gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATg < 2:3025579/93‑1 (MQ=255)
aaCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCCTTTTCTTGTTGGTTTGTCGCTGGATGGc > 1:2420051/1‑93 (MQ=255)
aaCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGc > 2:1443281/1‑93 (MQ=255)
aaCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGc < 1:58081/93‑1 (MQ=255)
gCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGc > 1:4494287/1‑93 (MQ=255)
cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc < 1:1168843/93‑1 (MQ=255)
cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc < 1:4404233/93‑1 (MQ=255)
tCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTg > 2:75948/1‑93 (MQ=255)
tCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTg > 1:647367/1‑93 (MQ=255)
ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga < 2:3438178/93‑1 (MQ=255)
ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga < 1:842828/93‑1 (MQ=255)
ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga < 2:2929705/93‑1 (MQ=255)
cAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTgag < 1:4088841/93‑1 (MQ=255)
aGACTAACGGCGTGCTGCTGGATGACGAATGGGGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTgaga < 2:4361957/93‑1 (MQ=255)
gACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAt > 2:2365922/1‑93 (MQ=255)
gACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAt < 1:1262509/93‑1 (MQ=255)
aCTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATc < 2:3528959/93‑1 (MQ=255)
tAACGGCGTTCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCca < 1:2998680/93‑1 (MQ=255)
tAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCca < 1:4002882/93‑1 (MQ=255)
aaCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcac > 1:2924988/1‑93 (MQ=255)
aCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcaca > 2:3829742/1‑93 (MQ=255)
aCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcaca > 1:1275379/1‑93 (MQ=255)
ggCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaat < 1:1657099/93‑1 (MQ=255)
gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGCGATCCAcaatc > 1:1721260/1‑93 (MQ=255)
gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatc < 2:4193096/93‑1 (MQ=255)
gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaa > 1:2076672/1‑93 (MQ=255)
gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaa > 2:2863149/1‑93 (MQ=255)
tgctgcTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaat > 2:4540507/1‑93 (MQ=255)
gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAata < 2:2307614/93‑1 (MQ=255)
gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAata < 2:1933205/93‑1 (MQ=255)
ctgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAatat > 1:3439912/1‑93 (MQ=255)
tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc < 1:4052224/93‑1 (MQ=255)
tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc < 1:2839598/93‑1 (MQ=255)
tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc < 1:3206699/93‑1 (MQ=255)
tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc < 2:606257/93‑1 (MQ=255)
tgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgcg > 2:2147581/1‑93 (MQ=255)
ggATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGt > 1:250392/1‑93 (MQ=255)
gATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTg > 1:740633/1‑93 (MQ=255)
aTGACGAATGGTGCGCGTTTCTCGCGGGGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGa > 1:1008353/1‑93 (MQ=255)
aTGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGa < 1:1439579/93‑1 (MQ=255)
aTGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGa > 2:1755867/1‑93 (MQ=255)
tGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAc > 2:4323158/1‑93 (MQ=255)
tGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAc > 2:2824482/1‑93 (MQ=255)
gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACt > 2:3497442/1‑93 (MQ=255)
gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACt < 1:1938961/93‑1 (MQ=255)
cGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaa > 2:1579587/1‑93 (MQ=255)
cGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaa < 2:482342/93‑1 (MQ=255)
cGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaa > 2:1837180/1‑93 (MQ=255)
gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa < 2:163693/93‑1 (MQ=255)
gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa > 1:11309/1‑93 (MQ=255)
aaTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAg < 2:1213148/93‑1 (MQ=255)
aTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAgg < 1:3563481/93‑1 (MQ=255)
aTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAgg > 1:1642896/1‑93 (MQ=255)
gcgcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCa > 2:2726117/4‑93 (MQ=255)
gcgcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCa < 1:4598855/90‑1 (MQ=255)
ggcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAg < 1:253017/91‑1 (MQ=255)
gcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGa < 1:933681/92‑1 (MQ=255)
gcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGa > 2:3945388/2‑93 (MQ=255)
cGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAc < 1:4585069/93‑1 (MQ=255)
gTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGGGGCAGaac > 2:2532436/1‑91 (MQ=255)
gTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGGGGCAGAcc > 1:4171308/1‑93 (MQ=255)
tcGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGc > 1:3864162/1‑93 (MQ=255)
tcGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGc < 1:2027241/93‑1 (MQ=255)
ccgGAGCATCATCGTCTTGTTCGTTTGTCGCTGGATGGTCCGACTGAGAGCCGCAATCAATAGCGCGTGTCTAAAGGTGGCAGACCCACGCag < 2:538001/92‑2 (MQ=255)
gAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAg < 1:3237471/93‑1 (MQ=255)
aGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGc > 1:3071955/1‑93 (MQ=255)
catcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGTTCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTg > 1:3297585/1‑93 (MQ=255)
catcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTg < 2:862447/93‑1 (MQ=255)
tcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGt > 1:3049746/1‑93 (MQ=255)
tcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGt > 1:2591043/1‑93 (MQ=255)
atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAGCCACGCATAAGCTGGTGa > 2:2007606/1‑93 (MQ=255)
atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa < 1:178058/93‑1 (MQ=255)
atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa < 2:3162161/93‑1 (MQ=255)
atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCCGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa < 1:1498795/93‑1 (MQ=255)
ttttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGCCCCACGCATAAGCTGGTGAt < 1:174371/93‑1 (MQ=255)
ttttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAt > 2:3617708/1‑93 (MQ=255)
ttttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAt < 2:1537291/93‑1 (MQ=255)
ttttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAt < 1:3945963/93‑1 (MQ=255)
tttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATg > 2:2326325/1‑93 (MQ=255)
ttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGc < 2:1333213/93‑1 (MQ=255)
tCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCg < 2:4625758/93‑1 (MQ=255)
gttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGcc < 1:551875/93‑1 (MQ=255)
gttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGcc > 2:57399/1‑93 (MQ=255)
ttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGccc > 2:1382621/1‑93 (MQ=255)
tgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCt < 1:1091382/93‑1 (MQ=255)
gTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGa < 2:1486205/93‑1 (MQ=255)
tttGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAc < 1:895637/93‑1 (MQ=255)
tttGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAc < 2:17165/93‑1 (MQ=255)
|
GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC > NC_000913/3980864‑3981043
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCTC > NC_000913/3980861‑3981047
|
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG > SRR4302535.2742318/1‑94 (MQ=60)
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG > SRR4302535.2447777/1‑94 (MQ=60)
AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT < SRR4302535.2923354/94‑1 (MQ=60)
AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT < SRR4302535.3201235/94‑1 (MQ=60)
AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT < SRR4302535.5697/94‑1 (MQ=60)
GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCG < SRR4302535.1454626/94‑1 (MQ=60)
AAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGC < SRR4302535.2245543/94‑1 (MQ=60)
AGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCT < SRR4302535.3858156/94‑1 (MQ=60)
AGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCT < SRR4302535.3628999/94‑1 (MQ=60)
GATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTG > SRR4302535.2900758/1‑94 (MQ=60)
GATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTG > SRR4302535.4583720/1‑94 (MQ=60)
ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGG > SRR4302535.1615170/1‑94 (MQ=60)
ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGG < SRR4302535.3299650/94‑1 (MQ=60)
AAGTAACATCATCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT < SRR4302535.353062/94‑1 (MQ=60)
AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT < SRR4302535.607537/94‑1 (MQ=60)
AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT < SRR4302535.3077933/94‑1 (MQ=60)
AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGTATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATG < SRR4302535.1159673/94‑1 (MQ=60)
AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATG < SRR4302535.2580851/94‑1 (MQ=60)
GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGG < SRR4302535.1458749/94‑1 (MQ=60)
TAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCCTTTTCTTGTTGGTTTGTCGCTGGATGGC > SRR4302535.2437476/1‑94 (MQ=60)
AACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCC < SRR4302535.58508/94‑1 (MQ=60)
ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCC < SRR4302535.1821472/94‑1 (MQ=60)
ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCC < SRR4302535.770940/94‑1 (MQ=60)
CAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTTGCTGGATGGCCCC > SRR4302535.1672623/1‑94 (MQ=60)
AGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGC > SRR4302535.4525137/1‑94 (MQ=60)
AGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGC < SRR4302535.1626423/94‑1 (MQ=60)
AGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGC > SRR4302535.1369576/1‑94 (MQ=60)
CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT > SRR4302535.2978341/1‑94 (MQ=60)
CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT < SRR4302535.3869467/94‑1 (MQ=60)
CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT < SRR4302535.912798/94‑1 (MQ=60)
CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT < SRR4302535.1177185/94‑1 (MQ=60)
CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT < SRR4302535.4434374/94‑1 (MQ=60)
CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT < SRR4302535.4173226/94‑1 (MQ=60)
TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTG > SRR4302535.651878/1‑94 (MQ=60)
TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTG > SRR4302535.3242450/1‑94 (MQ=60)
TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTG > SRR4302535.1663156/1‑94 (MQ=60)
CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAG < SRR4302535.3999018/94‑1 (MQ=60)
CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAG < SRR4302535.848750/94‑1 (MQ=60)
CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGA < SRR4302535.4116819/94‑1 (MQ=60)
CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGA > SRR4302535.2029762/1‑94 (MQ=60)
AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT < SRR4302535.3946889/94‑1 (MQ=60)
AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT > SRR4302535.81223/1‑94 (MQ=60)
GACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATC < SRR4302535.1271543/94‑1 (MQ=60)
GACTAACGGCGTGCTGCTGGATAACGAATGGTGCGCGTTTCTAGCGGAGCATCATTTTCTTGGTGGTTTGTCGCTGGATGGCCCCCCTGAGATC > SRR4302535.1826424/1‑94 (MQ=60)
CTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCA < SRR4302535.239078/94‑1 (MQ=60)
TAACGGCGTTCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAC < SRR4302535.3019706/94‑1 (MQ=60)
TAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAC > SRR4302535.2945610/1‑94 (MQ=60)
TAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAC < SRR4302535.4030261/94‑1 (MQ=60)
AACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACA > SRR4302535.1632415/1‑94 (MQ=60)
AACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACA > SRR4302535.1284485/1‑94 (MQ=60)
CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAAT < SRR4302535.3859824/94‑1 (MQ=60)
GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGCGATCCACAATC > SRR4302535.1733706/1‑94 (MQ=60)
GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATC < SRR4302535.1669083/94‑1 (MQ=60)
GCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCA > SRR4302535.2654723/1‑94 (MQ=60)
CGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGGGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAA > SRR4302535.872005/1‑94 (MQ=60)
CGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAA > SRR4302535.893064/1‑94 (MQ=60)
CGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAA > SRR4302535.2091632/1‑94 (MQ=60)
GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT > SRR4302535.4419173/1‑94 (MQ=60)
TGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATA < SRR4302535.2444237/94‑1 (MQ=60)
TGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATA > SRR4302535.2105695/1‑94 (MQ=60)
TGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATA > SRR4302535.1728174/1‑94 (MQ=60)
GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT > SRR4302535.3463832/1‑94 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG < SRR4302535.3228909/94‑1 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG < SRR4302535.2859741/94‑1 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG < SRR4302535.1778083/94‑1 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG < SRR4302535.4079968/94‑1 (MQ=60)
CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG > SRR4302535.3695883/1‑94 (MQ=60)
TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT > SRR4302535.3048075/1‑94 (MQ=60)
TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT > SRR4302535.1095264/1‑94 (MQ=60)
TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT > SRR4302535.252117/1‑94 (MQ=60)
GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTG > SRR4302535.745836/1‑94 (MQ=60)
GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTG < SRR4302535.4041763/94‑1 (MQ=60)
GATGACGAATGGTGCGCGTTTCTCGCGGGGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGA > SRR4302535.1015518/1‑94 (MQ=60)
ATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAC < SRR4302535.1449870/94‑1 (MQ=60)
TGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACT > SRR4302535.1507974/1‑94 (MQ=60)
TGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACT > SRR4302535.681188/1‑94 (MQ=60)
GACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTA < SRR4302535.1952923/94‑1 (MQ=60)
CGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAA > SRR4302535.1450814/1‑94 (MQ=60)
CGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAA > SRR4302535.11397/1‑94 (MQ=60)
GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG < SRR4302535.589484/94‑1 (MQ=60)
GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG < SRR4302535.1396011/94‑1 (MQ=60)
GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG > SRR4302535.3998386/1‑94 (MQ=60)
AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG > SRR4302535.1654772/1‑94 (MQ=60)
ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT < SRR4302535.3588188/94‑1 (MQ=60)
ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT < SRR4302535.1181599/94‑1 (MQ=60)
TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG < SRR4302535.3222386/94‑1 (MQ=60)
TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG > SRR4302535.2507431/1‑94 (MQ=60)
TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG < SRR4302535.1183231/94‑1 (MQ=60)
GGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGG < SRR4302535.4220384/94‑1 (MQ=60)
GGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGG < SRR4302535.3459315/94‑1 (MQ=60)
gcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAG < SRR4302535.4630139/91‑1 (MQ=60)
GGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGA < SRR4302535.254761/94‑1 (MQ=60)
GCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAC < SRR4302535.940287/94‑1 (MQ=60)
CGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACC < SRR4302535.4616293/94‑1 (MQ=60)
CGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGGGGCAGACC > SRR4302535.4199866/1‑94 (MQ=60)
GTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCC > SRR4302535.1125394/1‑94 (MQ=60)
GTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCC > SRR4302535.3567448/1‑94 (MQ=60)
TTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCA < SRR4302535.2937385/94‑1 (MQ=60)
TTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCAC < SRR4302535.2003942/94‑1 (MQ=60)
CTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGC > SRR4302535.3890745/1‑94 (MQ=60)
TCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCA < SRR4302535.2041849/94‑1 (MQ=60)
TCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCA < SRR4302535.1786257/94‑1 (MQ=60)
CGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCAT > SRR4302535.362132/1‑94 (MQ=60)
GGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAG > SRR4302535.2576493/1‑94 (MQ=60)
GGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAG < SRR4302535.4622316/94‑1 (MQ=60)
GAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGC > SRR4302535.518185/1‑94 (MQ=60)
GAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGC > SRR4302535.3093402/1‑94 (MQ=60)
GAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGC < SRR4302535.3259946/94‑1 (MQ=60)
GCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGTTCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTG > SRR4302535.3320512/1‑94 (MQ=60)
GCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTG < SRR4302535.3301882/94‑1 (MQ=60)
GCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTG < SRR4302535.3483451/94‑1 (MQ=60)
CATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGG < SRR4302535.410885/94‑1 (MQ=60)
CATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGG < SRR4302535.1751675/94‑1 (MQ=60)
ATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGT < SRR4302535.1116330/94‑1 (MQ=60)
ATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGT > SRR4302535.2609647/1‑94 (MQ=60)
ATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGT > SRR4302535.3071110/1‑94 (MQ=60)
TCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTG > SRR4302535.36258/1‑94 (MQ=60)
CATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGA > SRR4302535.3511473/1‑94 (MQ=60)
ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT > SRR4302535.1272651/1‑94 (MQ=60)
ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT < SRR4302535.179296/94‑1 (MQ=60)
ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT > SRR4302535.2065857/1‑94 (MQ=60)
ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCCGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT < SRR4302535.1509576/94‑1 (MQ=60)
TTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGCCCCACGCATAAGCTGGTGATG < SRR4302535.175577/94‑1 (MQ=60)
TTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATG > SRR4302535.4391324/1‑94 (MQ=60)
TTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATG < SRR4302535.3972911/94‑1 (MQ=60)
TTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATTCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGC > SRR4302535.4095909/1‑94 (MQ=60)
TTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCG < SRR4302535.2481914/94‑1 (MQ=60)
TTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTG < SRR4302535.51325/94‑1 (MQ=60)
CTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTG > SRR4302535.55900/1‑94 (MQ=60)
CTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTG > SRR4302535.4440127/1‑94 (MQ=60)
TGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCC > SRR4302535.211807/1‑94 (MQ=60)
GTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCC < SRR4302535.555739/94‑1 (MQ=60)
GTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCC > SRR4302535.2523011/1‑94 (MQ=60)
TTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCT < SRR4302535.4571488/94‑1 (MQ=60)
TGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTG < SRR4302535.1099159/94‑1 (MQ=60)
TGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTG > SRR4302535.3148662/1‑94 (MQ=60)
TGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTG > SRR4302535.3401929/1‑94 (MQ=60)
GGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGA > SRR4302535.3025474/1‑94 (MQ=60)
TTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACG > SRR4302535.612815/1‑94 (MQ=60)
TTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACG < SRR4302535.901988/94‑1 (MQ=60)
TTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACG < SRR4302535.1594691/94‑1 (MQ=60)
TGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCT > SRR4302535.290515/1‑94 (MQ=60)
GTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCTC < SRR4302535.1863370/94‑1 (MQ=60)
|
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCTC > NC_000913/3980861‑3981047
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
