Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,980,954 A→G L128L (TTA→TTG aslB → putative arylsulfatase regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,980,9540AG99.4% 1109.3 / NA 359L128L (TTA→TTGaslBputative arylsulfatase regulator
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base G (177/179);  minor base T (0/2);  total (177/182)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 377 total aligned reads displayed.

GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC  >  NC_000913/3980864‑3981043
                                                                                          |                                                                                         
gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTc                                                                                         <  1:6140493/93‑1 (MQ=255)
 aaGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCg                                                                                        >  1:1859890/1‑93 (MQ=255)
   gATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCt                                                                                      >  2:2833315/1‑93 (MQ=255)
    aTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTg                                                                                     <  2:7094537/93‑1 (MQ=255)
     tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTTGCTgg                                                                                    >  2:5606706/1‑93 (MQ=255)
     tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTgg                                                                                    <  2:4155238/93‑1 (MQ=255)
     tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTgg                                                                                    >  1:3665964/1‑93 (MQ=255)
      aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGa                                                                                   <  2:743646/93‑1 (MQ=255)
        gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATg                                                                                 >  2:787270/1‑93 (MQ=255)
        gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATg                                                                                 <  1:6480019/93‑1 (MQ=255)
         tAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATgg                                                                                >  2:615808/1‑93 (MQ=255)
           aCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGcc                                                                              <  1:3440797/93‑1 (MQ=255)
             aGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTTTTGGTTTGTCGCTGGATGGCCCg                                                                            >  1:7625627/1‑93 (MQ=255)
             aGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCg                                                                            >  2:595605/1‑93 (MQ=255)
              gCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGc                                                                           >  2:1409622/1‑93 (MQ=255)
               cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc                                                                          <  1:2482155/93‑1 (MQ=255)
               cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc                                                                          >  2:2003117/1‑93 (MQ=255)
                ttCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCt                                                                         >  2:6413410/1‑93 (MQ=255)
                 tCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTg                                                                        <  1:328110/93‑1 (MQ=255)
                  ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga                                                                       <  2:2509305/93‑1 (MQ=255)
                  ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga                                                                       <  1:4311925/93‑1 (MQ=255)
                  ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga                                                                       <  1:573413/93‑1 (MQ=255)
                  acAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga                                                                       <  2:1877976/92‑1 (MQ=255)
                   cAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTgag                                                                      >  1:4230882/1‑93 (MQ=255)
                    aGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTgaga                                                                     >  1:1003109/1‑93 (MQ=255)
                     gACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAt                                                                    >  1:263340/1‑93 (MQ=255)
                       cTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTTGCGGAGCATCATTTTTTTTTTGGTTTTTTGCTGGGTGGTGCGCCCGAGATcc                                                                  >  2:7662040/1‑93 (MQ=255)
                       cTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGGGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGTCAGCCTGAGATcc                                                                  >  2:5972399/1‑93 (MQ=255)
                       cTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATcc                                                                  >  1:6380423/1‑93 (MQ=255)
                       cTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATcc                                                                  <  2:1521733/93‑1 (MQ=255)
                       cTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATcc                                                                  <  2:1135359/93‑1 (MQ=255)
                        tAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCca                                                                 >  1:2403895/1‑93 (MQ=255)
                         aaCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcac                                                                >  2:3767280/1‑93 (MQ=255)
                         aaCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcac                                                                >  2:6791019/1‑93 (MQ=255)
                         aaCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATCGCCCCCCTGAGATTcac                                                                >  2:4682476/1‑93 (MQ=255)
                          aCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcaca                                                               <  1:5817460/93‑1 (MQ=255)
                          aCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcaca                                                               <  2:7353080/93‑1 (MQ=255)
                            ggCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaat                                                             <  1:7009829/93‑1 (MQ=255)
                             gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatc                                                            >  2:4043495/1‑93 (MQ=255)
                             gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatc                                                            <  2:5337658/93‑1 (MQ=255)
                             gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatc                                                            <  2:7934256/93‑1 (MQ=255)
                               gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaa                                                          <  1:3963960/93‑1 (MQ=255)
                               gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaa                                                          <  1:5868783/93‑1 (MQ=255)
                                tgctgcTGGATGACGAATGGTGCGCGTCTCTCGCGGCGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaat                                                         <  1:4069930/93‑1 (MQ=255)
                                  ctgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAatat                                                       <  1:2108612/93‑1 (MQ=255)
                                  ctgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAatat                                                       <  2:5463791/93‑1 (MQ=255)
                                  ctgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAatat                                                       <  1:5456574/93‑1 (MQ=255)
                                   tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc                                                      >  2:3551756/1‑93 (MQ=255)
                                   tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc                                                      <  2:3891322/93‑1 (MQ=255)
                                   tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc                                                      <  1:4542589/93‑1 (MQ=255)
                                     ctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgc                                                    <  1:3755528/93‑1 (MQ=255)
                                      tgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgcg                                                   >  1:5194073/1‑93 (MQ=255)
                                      tgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgcg                                                   >  2:2574221/1‑93 (MQ=255)
                                          tGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGGTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAc                                               >  2:5044991/1‑93 (MQ=255)
                                              gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa                                           >  1:2005567/1‑93 (MQ=255)
                                                aTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAgg                                         >  2:3439910/1‑93 (MQ=255)
                                                    tgcgcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGc                                     >  1:5948264/5‑93 (MQ=255)
                                                     gcgcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCa                                    <  2:2700771/90‑1 (MQ=255)
                                                     gcgcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCa                                    <  1:1198702/90‑1 (MQ=255)
                                                       gcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGa                                  >  1:6684932/2‑93 (MQ=255)
                                                       gcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGa                                  <  2:1698669/92‑1 (MQ=255)
                                                        cGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAc                                 <  2:4463149/93‑1 (MQ=255)
                                                         gTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAcc                                <  2:1261607/93‑1 (MQ=255)
                                                         gTTTCTCGCGGAGCATCATTTTCTTGATGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAcc                                >  2:5240316/1‑93 (MQ=255)
                                                           ttCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCa                              <  1:5050069/93‑1 (MQ=255)
                                                               cgcgGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCATGACTAAAGGTGGCAGGCCCACGCa                          <  1:4462439/93‑1 (MQ=255)
                                                                  ggAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATat                       <  2:4792285/93‑2 (MQ=255)
                                                                  ggAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATaa                       >  1:3191755/1‑93 (MQ=255)
                                                                  ggAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATaa                       <  2:6226696/93‑1 (MQ=255)
                                                                  ggAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATaa                       >  1:564489/1‑93 (MQ=255)
                                                                  ggAGCATCATTTTCTTGTTGGTTTGTCGCTGGACGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATaa                       >  1:7184469/1‑93 (MQ=255)
                                                                   gAGCATCATGTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAg                      <  1:2253625/93‑1 (MQ=255)
                                                                     gCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCt                    <  2:6660644/93‑1 (MQ=255)
                                                                     gCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCt                    <  2:3355052/93‑1 (MQ=255)
                                                                       atcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTgg                  >  1:681565/1‑93 (MQ=255)
                                                                        tcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGt                 >  2:4937574/1‑93 (MQ=255)
                                                                        tcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGt                 <  1:3532798/93‑1 (MQ=255)
                                                                          atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa               <  2:109560/93‑1 (MQ=255)
                                                                          atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa               <  1:306563/93‑1 (MQ=255)
                                                                          atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa               <  1:7489531/93‑1 (MQ=255)
                                                                          atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAGCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa               <  1:5528269/93‑1 (MQ=255)
                                                                           ttttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAt              <  2:7115999/93‑1 (MQ=255)
                                                                           ttttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAt              >  2:3864366/1‑93 (MQ=255)
                                                                           ttttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAt              >  1:4783930/1‑93 (MQ=255)
                                                                           ttttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAt              <  1:914829/93‑1 (MQ=255)
                                                                           ttttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAt              >  1:7264280/1‑93 (MQ=255)
                                                                            tttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATg             <  1:1070398/93‑1 (MQ=255)
                                                                             ttCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGc            <  1:5234166/93‑1 (MQ=255)
                                                                              tCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCg           <  1:1301884/93‑1 (MQ=255)
                                                                                 tgttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGc        >  2:7278092/1‑93 (MQ=255)
                                                                                  gttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGcc       <  2:3200982/93‑1 (MQ=255)
                                                                                   ttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGccc      >  1:2814424/1‑93 (MQ=255)
                                                                                    tgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCt     <  2:2977110/93‑1 (MQ=255)
                                                                                      gTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGCCCCACGCATAAGCTGGTGATGCGTGCCCTGa   <  1:4584257/93‑1 (MQ=255)
                                                                                      gTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGa   >  2:1363535/1‑93 (MQ=255)
                                                                                      gTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGa   <  2:2352670/93‑1 (MQ=255)
                                                                                      gTTTGTCGCTGGATGGCCCGCCTGAGATCCACAAGCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGa   <  2:6943369/93‑1 (MQ=255)
                                                                                       tttGTCGCTGGATGGCCCGCCTGGGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAc  >  2:5863673/1‑93 (MQ=255)
                                                                                       tttGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAc  >  1:7935011/1‑93 (MQ=255)
                                                                                       tttGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAc  >  2:4369717/1‑93 (MQ=255)
                                                                                          |                                                                                         
GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC  >  NC_000913/3980864‑3981043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCT  >  NC_000913/3980861‑3981046
                                                                                             |                                                                                            
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTT                                                                                              >  SRR4302543.2509648/1‑94 (MQ=60)
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG                                                                                              <  SRR4302543.3901408/94‑1 (MQ=60)
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG                                                                                              <  SRR4302543.3428066/94‑1 (MQ=60)
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG                                                                                              <  SRR4302543.359172/94‑1 (MQ=60)
 AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                                                             >  SRR4302543.2249378/1‑94 (MQ=60)
 AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                                                             >  SRR4302543.5862587/1‑94 (MQ=60)
 AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                                                             >  SRR4302543.2609380/1‑94 (MQ=60)
 AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                                                             >  SRR4302543.6223909/1‑94 (MQ=60)
 AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                                                             <  SRR4302543.4498560/94‑1 (MQ=60)
 AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                                                             >  SRR4302543.1897799/1‑94 (MQ=60)
  GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                                                            >  SRR4302543.7964989/1‑94 (MQ=60)
  GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                                                            <  SRR4302543.6190748/94‑1 (MQ=60)
  GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                                                            <  SRR4302543.2648568/94‑1 (MQ=60)
  GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                                                            <  SRR4302543.7784455/94‑1 (MQ=60)
   GAAGATAAGTAACAGCTTCCAGACTACCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCG                                                                                           <  SRR4302543.2873750/94‑1 (MQ=60)
   GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCG                                                                                           >  SRR4302543.1876603/1‑94 (MQ=60)
   GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCG                                                                                           <  SRR4302543.6198650/94‑1 (MQ=60)
    AAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGC                                                                                          >  SRR4302543.1115163/1‑94 (MQ=60)
      GATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATTACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTG                                                                                        >  SRR4302543.528512/1‑94 (MQ=60)
      GATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTG                                                                                        >  SRR4302543.402180/1‑94 (MQ=60)
      GATAAGTAACAGCTTCCAGAATAATTGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTG                                                                                        <  SRR4302543.1897177/94‑1 (MQ=60)
       ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGG                                                                                       >  SRR4302543.3698152/1‑94 (MQ=60)
       ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTCGTTTGTCGCTGG                                                                                       >  SRR4302543.7174996/1‑94 (MQ=60)
        TAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGA                                                                                      >  SRR4302543.3455427/1‑94 (MQ=60)
        TAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGA                                                                                      >  SRR4302543.3675853/1‑94 (MQ=60)
           GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGG                                                                                   <  SRR4302543.6541072/94‑1 (MQ=60)
           GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGG                                                                                   <  SRR4302543.5161625/94‑1 (MQ=60)
             AACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCC                                                                                 >  SRR4302543.5793930/1‑94 (MQ=60)
             AACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCC                                                                                 >  SRR4302543.7581468/1‑94 (MQ=60)
             AACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCC                                                                                 >  SRR4302543.6116999/1‑94 (MQ=60)
              ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCC                                                                                <  SRR4302543.3471599/94‑1 (MQ=60)
              ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCC                                                                                <  SRR4302543.2618529/94‑1 (MQ=60)
               CAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTTTTGGTTTGTCGCTGGATGGCCCG                                                                               >  SRR4302543.7697989/1‑94 (MQ=60)
               CAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCG                                                                               <  SRR4302543.5713139/94‑1 (MQ=60)
                AGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGC                                                                              >  SRR4302543.4604863/1‑94 (MQ=60)
                AGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGC                                                                              >  SRR4302543.6561525/1‑94 (MQ=60)
                  CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT                                                                            >  SRR4302543.3875131/1‑94 (MQ=60)
                  CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT                                                                            <  SRR4302543.2504625/94‑1 (MQ=60)
                   TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTG                                                                           >  SRR4302543.4488772/1‑94 (MQ=60)
                   TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTG                                                                           >  SRR4302543.5745224/1‑94 (MQ=60)
                    TCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGA                                                                          <  SRR4302543.331114/94‑1 (MQ=60)
                    TCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGA                                                                          <  SRR4302543.5831611/94‑1 (MQ=60)
                     TCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAG                                                                         <  SRR4302543.3114017/94‑1 (MQ=60)
                     CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAG                                                                         <  SRR4302543.4351091/94‑1 (MQ=60)
                     CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAG                                                                         <  SRR4302543.578661/94‑1 (MQ=60)
                     CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAG                                                                         <  SRR4302543.7649887/94‑1 (MQ=60)
                     CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAG                                                                         >  SRR4302543.4269260/1‑94 (MQ=60)
                     CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCAGCCTTTTCTTGTTGGTTTGGCGCTGGATGGGCCGCCTGAG                                                                         >  SRR4302543.4269261/1‑94 (MQ=60)
                      CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGC                                                                        >  SRR4302543.2649033/1‑94 (MQ=60)
                      CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGA                                                                        >  SRR4302543.1011975/1‑94 (MQ=60)
                      CAGACTAACGGCGTGCTGCTGGATGACGAATGGGGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGC                                                                        >  SRR4302543.2305550/1‑94 (MQ=60)
                      CAGACTAACGGCGTGCAGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGCTGCATTGTCGCTGGATGGCCCGCCTGggc                                                                        >  SRR4302543.3077664/1‑91 (MQ=60)
                       AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT                                                                       <  SRR4302543.3100839/94‑1 (MQ=60)
                       AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT                                                                       >  SRR4302543.265646/1‑94 (MQ=60)
                        GACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATC                                                                      >  SRR4302543.6503997/1‑94 (MQ=60)
                        GACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATC                                                                      <  SRR4302543.5172327/94‑1 (MQ=60)
                        GACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATC                                                                      <  SRR4302543.3353249/94‑1 (MQ=60)
                         ACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCC                                                                     >  SRR4302543.3480317/1‑94 (MQ=60)
                         ACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCC                                                                     >  SRR4302543.6440454/1‑94 (MQ=60)
                          CTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCA                                                                    >  SRR4302543.4540277/1‑94 (MQ=60)
                          CTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCA                                                                    >  SRR4302543.2425639/1‑94 (MQ=60)
                            AGCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACA                                                                  <  SRR4302543.4526353/94‑1 (MQ=60)
                            AACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACA                                                                  <  SRR4302543.5653884/94‑1 (MQ=60)
                            AACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACA                                                                  <  SRR4302543.5653886/94‑1 (MQ=60)
                            AACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACA                                                                  <  SRR4302543.5312171/94‑1 (MQ=60)
                             ACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAA                                                                 <  SRR4302543.5870364/94‑1 (MQ=60)
                              CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAAT                                                                >  SRR4302543.6871131/1‑94 (MQ=60)
                              CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAAT                                                                <  SRR4302543.4354023/94‑1 (MQ=60)
                               GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACCATC                                                               >  SRR4302543.4316320/1‑94 (MQ=60)
                               GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATC                                                               <  SRR4302543.7076629/94‑1 (MQ=60)
                                  GTGCTGCTGGATGCCGAGTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                                                            <  SRR4302543.7106839/94‑1 (MQ=60)
                                  GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                                                            <  SRR4302543.5923925/94‑1 (MQ=60)
                                  GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                                                            <  SRR4302543.3999068/94‑1 (MQ=60)
                                  GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                                                            <  SRR4302543.5922218/94‑1 (MQ=60)
                                  GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                                                            <  SRR4302543.7549324/94‑1 (MQ=60)
                                   TGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATA                                                           <  SRR4302543.1378432/94‑1 (MQ=60)
                                   TGCTGCTGGATGACGAATGGTGCGCGTCTCTCGCGGCGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATA                                                           <  SRR4302543.4106384/94‑1 (MQ=60)
                                    GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT                                                          <  SRR4302543.1275526/94‑1 (MQ=60)
                                     CTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATC                                                         <  SRR4302543.6263846/94‑1 (MQ=60)
                                     CTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATC                                                         >  SRR4302543.7007409/1‑94 (MQ=60)
                                     CTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATC                                                         <  SRR4302543.2127484/94‑1 (MQ=60)
                                     CTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATC                                                         <  SRR4302543.2732048/94‑1 (MQ=60)
                                     CTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATC                                                         <  SRR4302543.5506042/94‑1 (MQ=60)
                                      TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG                                                        >  SRR4302543.3765563/1‑94 (MQ=60)
                                      TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG                                                        >  SRR4302543.5918810/1‑94 (MQ=60)
                                      TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG                                                        <  SRR4302543.2180193/94‑1 (MQ=60)
                                      TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG                                                        >  SRR4302543.234466/1‑94 (MQ=60)
                                      TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG                                                        <  SRR4302543.4583953/94‑1 (MQ=60)
                                        CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG                                                      <  SRR4302543.3788567/94‑1 (MQ=60)
                                        CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG                                                      >  SRR4302543.5240906/1‑94 (MQ=60)
                                          GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTG                                                    <  SRR4302543.649114/94‑1 (MQ=60)
                                          GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTG                                                    >  SRR4302543.7297351/1‑94 (MQ=60)
                                          GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTG                                                    >  SRR4302543.1233770/1‑94 (MQ=60)
                                            ATGACGAATGGTGCGCGTTTCTCGCGGAGCATCCTTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAC                                                  >  SRR4302543.357178/1‑94 (MQ=60)
                                            ATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAC                                                  <  SRR4302543.6199273/94‑1 (MQ=60)
                                             TGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACT                                                 <  SRR4302543.7896738/94‑1 (MQ=60)
                                              GACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTA                                                >  SRR4302543.2223886/1‑94 (MQ=60)
                                              GACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTA                                                >  SRR4302543.4646989/1‑94 (MQ=60)
                                              GACGAAGGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCTTGACTA                                                >  SRR4302543.2223885/1‑94 (MQ=60)
                                               ACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAA                                               <  SRR4302543.463052/94‑1 (MQ=60)
                                               ACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAA                                               >  SRR4302543.2816067/1‑94 (MQ=60)
                                               ACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAA                                               <  SRR4302543.7509265/94‑1 (MQ=60)
                                                CGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAA                                              >  SRR4302543.2023590/1‑94 (MQ=60)
                                                CGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAA                                              >  SRR4302543.4862724/1‑94 (MQ=60)
                                                CGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAA                                              >  SRR4302543.6913875/1‑94 (MQ=60)
                                                 GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG                                             >  SRR4302543.5930949/1‑94 (MQ=60)
                                                 GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG                                             <  SRR4302543.3773266/94‑1 (MQ=60)
                                                 GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG                                             <  SRR4302543.3312293/94‑1 (MQ=60)
                                                  AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG                                            >  SRR4302543.7788466/1‑94 (MQ=60)
                                                  AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG                                            <  SRR4302543.2100178/94‑1 (MQ=60)
                                                  AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG                                            >  SRR4302543.6898451/1‑94 (MQ=60)
                                                   ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT                                           >  SRR4302543.5169758/1‑94 (MQ=60)
                                                   ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT                                           >  SRR4302543.5169757/1‑94 (MQ=60)
                                                    TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG                                          <  SRR4302543.5272267/94‑1 (MQ=60)
                                                    TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG                                          <  SRR4302543.7999008/94‑1 (MQ=60)
                                                     GGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGG                                         <  SRR4302543.3924029/94‑1 (MQ=60)
                                                      gtgcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGC                                        <  SRR4302543.7370836/89‑1 (MQ=60)
                                                      gtgcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGC                                        >  SRR4302543.6002701/6‑94 (MQ=60)
                                                       tgcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCA                                       >  SRR4302543.3151084/5‑94 (MQ=60)
                                                        gcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAG                                      >  SRR4302543.3064865/4‑94 (MQ=60)
                                                        gcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAG                                      <  SRR4302543.1209497/91‑1 (MQ=60)
                                                         cgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGA                                     >  SRR4302543.4258031/3‑94 (MQ=60)
                                                         cgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGA                                     >  SRR4302543.6748041/3‑94 (MQ=60)
                                                           CGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACC                                   <  SRR4302543.1258862/94‑1 (MQ=60)
                                                           CGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACC                                   >  SRR4302543.4600047/1‑94 (MQ=60)
                                                           CGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACC                                   >  SRR4302543.4600046/1‑94 (MQ=60)
                                                           CGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGAAGACC                                   >  SRR4302543.2040077/1‑94 (MQ=60)
                                                           CGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGGGGCAGACC                                   >  SRR4302543.4096270/1‑94 (MQ=60)
                                                            TTTTCTCGTGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGTTGGCCCGCCTGATATCCTCAATCATTATCGTGTTACTAAAGGTGGCAtactc                                  >  SRR4302543.7070538/1‑89 (MQ=53)
                                                            GTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCC                                  >  SRR4302543.2534239/1‑94 (MQ=60)
                                                            GTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCC                                  >  SRR4302543.687725/1‑94 (MQ=60)
                                                            GTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCC                                  >  SRR4302543.5768106/1‑94 (MQ=60)
                                                              TTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCAC                                <  SRR4302543.5095985/94‑1 (MQ=60)
                                                               TCTCGCGGATCATCATTTTCTTGTTGGTTTTTCTCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACG                               <  SRR4302543.5533863/94‑1 (MQ=60)
                                                               TCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACG                               <  SRR4302543.7647144/94‑1 (MQ=60)
                                                                CTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGC                              <  SRR4302543.7222516/94‑1 (MQ=60)
                                                                CTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGC                              >  SRR4302543.401980/1‑94 (MQ=60)
                                                                 TCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATGAATATCGCGTGACTAAAGGTGGCAGACCCACGCA                             >  SRR4302543.2977755/1‑94 (MQ=60)
                                                                 TCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCA                             >  SRR4302543.2977754/1‑94 (MQ=60)
                                                                  CGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCAT                            <  SRR4302543.5279781/94‑1 (MQ=60)
                                                                  CGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCATGACTAAAGGTGGCAGGCCCACGCAT                            <  SRR4302543.4502873/94‑1 (MQ=60)
                                                                    CGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAA                          >  SRR4302543.2715597/1‑94 (MQ=60)
                                                                    CGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAA                          >  SRR4302543.3220529/1‑94 (MQ=60)
                                                                    CGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAA                          >  SRR4302543.1047334/1‑94 (MQ=60)
                                                                    CGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGACGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAA                          >  SRR4302543.7254179/1‑94 (MQ=60)
                                                                     GGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAG                         <  SRR4302543.5685469/94‑1 (MQ=60)
                                                                     GGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAG                         <  SRR4302543.3803531/94‑1 (MQ=60)
                                                                      GAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGC                        <  SRR4302543.2274119/94‑1 (MQ=60)
                                                                      GAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGC                        <  SRR4302543.249794/94‑1 (MQ=60)
                                                                      GAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGC                        <  SRR4302543.1121798/94‑1 (MQ=60)
                                                                      GAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGC                        >  SRR4302543.6567838/1‑94 (MQ=60)
                                                                      GAGCATCATGTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGC                        <  SRR4302543.2274118/94‑1 (MQ=60)
                                                                       AGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCT                       <  SRR4302543.4782909/94‑1 (MQ=60)
                                                                        GCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGAAGACGCACGCATAAGCTG                      >  SRR4302543.4969427/1‑94 (MQ=60)
                                                                         CATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGG                     >  SRR4302543.687861/1‑94 (MQ=60)
                                                                         CATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAGAGCGTGACTAAAGGCGCGAGACCCACGCATACGCTGG                     >  SRR4302543.2038704/1‑94 (MQ=60)
                                                                          ATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGT                    >  SRR4302543.5265361/1‑94 (MQ=60)
                                                                           TCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTG                   >  SRR4302543.4156496/1‑94 (MQ=60)
                                                                           TCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTG                   <  SRR4302543.3564244/94‑1 (MQ=60)
                                                                            CATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGT                  >  SRR4302543.5841228/1‑94 (MQ=60)
                                                                            CATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGA                  >  SRR4302543.5938661/1‑94 (MQ=60)
                                                                             ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT                 >  SRR4302543.3559253/1‑94 (MQ=60)
                                                                             ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT                 <  SRR4302543.5578486/94‑1 (MQ=60)
                                                                             ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT                 <  SRR4302543.5479452/94‑1 (MQ=60)
                                                                             ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT                 >  SRR4302543.4827659/1‑94 (MQ=60)
                                                                             ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT                 >  SRR4302543.7334467/1‑94 (MQ=60)
                                                                             ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT                 <  SRR4302543.7561192/94‑1 (MQ=60)
                                                                             ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT                 <  SRR4302543.309328/94‑1 (MQ=60)
                                                                             ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAGCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT                 <  SRR4302543.5578487/94‑1 (MQ=60)
                                                                             ATTTTCTTGGTGGTTTGTCGCTGGATGCCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT                 <  SRR4302543.3233910/94‑1 (MQ=60)
                                                                              TTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATG                <  SRR4302543.922854/94‑1 (MQ=60)
                                                                              TTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATG                <  SRR4302543.1019772/94‑1 (MQ=60)
                                                                               TTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGC               <  SRR4302543.921356/94‑1 (MQ=60)
                                                                               TTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGC               <  SRR4302543.1080020/94‑1 (MQ=60)
                                                                                TTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCG              >  SRR4302543.3877594/1‑94 (MQ=60)
                                                                                TTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCG              <  SRR4302543.5281327/94‑1 (MQ=60)
                                                                                 TCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGT             <  SRR4302543.884065/94‑1 (MQ=60)
                                                                                 TCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGT             <  SRR4302543.1313447/94‑1 (MQ=60)
                                                                                  CTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTG            >  SRR4302543.1529189/1‑94 (MQ=60)
                                                                                  CTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTG            <  SRR4302543.3221517/94‑1 (MQ=60)
                                                                                  CTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTG            >  SRR4302543.1863941/1‑94 (MQ=60)
                                                                                   TTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGC           >  SRR4302543.4220214/1‑94 (MQ=60)
                                                                                   TTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGC           >  SRR4302543.196181/1‑94 (MQ=60)
                                                                                     GTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCC         >  SRR4302543.6163561/1‑94 (MQ=60)
                                                                                     GTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCC         >  SRR4302543.6163560/1‑94 (MQ=60)
                                                                                     GTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCC         >  SRR4302543.2840200/1‑94 (MQ=60)
                                                                                      TTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCT        <  SRR4302543.7297935/94‑1 (MQ=60)
                                                                                      TTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCT        >  SRR4302543.1133430/1‑94 (MQ=60)
                                                                                      TTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCT        <  SRR4302543.6447082/94‑1 (MQ=60)
                                                                                      TTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCT        >  SRR4302543.3564355/1‑94 (MQ=60)
                                                                                       TGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTG       <  SRR4302543.5880725/94‑1 (MQ=60)
                                                                                         GTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGCCCCACGCATAAGCTGGTGATGCGTGCCCTGAC     <  SRR4302543.4625909/94‑1 (MQ=60)
                                                                                         GTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC     <  SRR4302543.7544917/94‑1 (MQ=60)
                                                                                         GTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC     >  SRR4302543.8009493/1‑94 (MQ=60)
                                                                                         GTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC     >  SRR4302543.5158757/1‑94 (MQ=60)
                                                                                         GTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC     <  SRR4302543.6203152/94‑1 (MQ=60)
                                                                                         GTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGAGATGCGTGCCCTGAC     >  SRR4302543.4374089/1‑94 (MQ=60)
                                                                                          TTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACG    >  SRR4302543.2453428/1‑94 (MQ=60)
                                                                                            TGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCT  >  SRR4302543.4911583/1‑94 (MQ=60)
                                                                                            TGTCGCTGGATGGCCAGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCT  <  SRR4302543.5488793/94‑1 (MQ=60)
                                                                                             |                                                                                            
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCT  >  NC_000913/3980861‑3981046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: