Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,019,057 |
A→G |
V415V (GTA→GTG) |
yigR → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,019,057 | 0 | A | G | 100.0%
| 714.8
/ NA
| 232 | V415V (GTA→GTG) | yigR | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (110/122); total (110/122) |
Only 100 of 241 total aligned reads displayed.
AATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTG > NC_000913/4018968‑4019145
|
aaTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGa > 2:3870483/1‑93 (MQ=255)
aaTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGa < 1:965816/93‑1 (MQ=255)
aaTCTGTTTAACACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGa < 2:3339468/93‑1 (MQ=255)
aaTCTGTGTAATACGGCGCGTCACTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGa < 2:1267742/93‑1 (MQ=255)
aTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGAc > 2:1941284/1‑93 (MQ=255)
aTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGAc > 2:735085/1‑93 (MQ=255)
aTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGAc < 1:1741525/93‑1 (MQ=255)
aTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGCGTTACTCCAGAAAACCCTGCTCTACGTCGTAAGGGTGGGAc > 1:534871/1‑93 (MQ=255)
tCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACg > 2:1722232/1‑93 (MQ=255)
cTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGc > 1:2741739/1‑93 (MQ=255)
tGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGcc > 2:2195317/1‑93 (MQ=255)
tGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGcc > 1:2627048/1‑93 (MQ=255)
gTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCa < 2:4509169/93‑1 (MQ=255)
gTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCa > 1:2011648/1‑93 (MQ=255)
ttAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAgt > 1:699903/1‑92 (MQ=255)
ttAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGc > 2:2948380/1‑93 (MQ=255)
ttAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGc > 1:244086/1‑93 (MQ=255)
ttAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGGGGGACGCCAGc > 2:3904791/1‑93 (MQ=255)
tAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCt < 1:1124533/93‑1 (MQ=255)
aaTACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCtt < 1:4642412/93‑1 (MQ=255)
aTACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCttt > 1:1184168/1‑93 (MQ=255)
tACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTa > 2:1389112/1‑93 (MQ=255)
aCGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAt > 1:2300612/1‑93 (MQ=255)
cGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATc < 2:2499798/93‑1 (MQ=255)
cGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATc < 2:4098044/93‑1 (MQ=255)
ggCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATcc > 1:2785035/1‑93 (MQ=255)
gTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAAc < 1:3500752/93‑1 (MQ=255)
tCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACt > 2:4035891/1‑93 (MQ=255)
tCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACt < 2:3388513/93‑1 (MQ=255)
cGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTc < 2:4269073/93‑1 (MQ=255)
gCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCg > 2:903553/1‑93 (MQ=255)
gCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCg > 1:3958400/1‑93 (MQ=255)
cTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGa > 1:2076507/1‑93 (MQ=255)
cTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGa > 1:886375/1‑93 (MQ=255)
tCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAtt > 2:157608/1‑93 (MQ=255)
cAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAttt < 1:2850711/93‑1 (MQ=255)
aaTATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTa > 1:2400920/1‑93 (MQ=255)
aaTATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTa > 1:1382502/1‑93 (MQ=255)
atatGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACTCCAGCTTTATCCGCAACTCGATTTAt > 2:3792812/1‑93 (MQ=255)
tatGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATg > 2:3529108/1‑93 (MQ=255)
tatGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATg < 1:1440700/93‑1 (MQ=255)
atGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATgg < 2:2553423/93‑1 (MQ=255)
atGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATgg < 2:3681503/93‑1 (MQ=255)
tGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGa < 2:3363003/93‑1 (MQ=255)
tGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGa < 1:3210212/93‑1 (MQ=255)
gAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGCTTTATGGaaa > 1:1091667/1‑93 (MQ=255)
gAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaaa < 2:1427065/93‑1 (MQ=255)
gAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaaa > 2:917259/1‑93 (MQ=255)
aaGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaaaa > 2:3710044/1‑93 (MQ=255)
aaGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaaaa < 1:3950679/93‑1 (MQ=255)
aaGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaaaa < 2:458272/93‑1 (MQ=255)
aGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAc > 1:1858174/1‑93 (MQ=255)
gTGCAGCCGCAACTGGTGTTACTCCAGAAACCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACg < 2:1238154/93‑1 (MQ=255)
gTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACg > 1:3462202/1‑93 (MQ=255)
gTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACg > 1:4412397/1‑93 (MQ=255)
gTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACg < 1:15270/93‑1 (MQ=255)
gCAGCCGCAACTGGTGTTACTCCAGAAAGCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGc < 1:1655527/93‑1 (MQ=255)
gCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGaa > 2:264571/1‑93 (MQ=255)
gCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGaa > 2:2094329/1‑93 (MQ=255)
gCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGct > 2:3058835/1‑92 (MQ=255)
gCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGcc > 1:55193/1‑93 (MQ=255)
gCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGcc > 2:2857250/1‑93 (MQ=255)
aaCTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCtt < 1:4363144/93‑1 (MQ=255)
aCTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCttt < 2:2478192/93‑1 (MQ=255)
cTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTc < 1:1329468/93‑1 (MQ=255)
tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc < 1:3254614/93‑1 (MQ=255)
tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc < 2:618510/93‑1 (MQ=255)
ggTGTTACTCCAGCCAACCCTGCACTACGACAGTGAGGTGGGCCGCCAGCTTTATCCGCGACTCGCTTTATGGACGACGGCGAAGCCTTTCCt < 2:4684482/93‑1 (MQ=255)
ggTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCt < 1:4087560/93‑1 (MQ=255)
ttACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAg > 1:3837178/1‑93 (MQ=255)
aCTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTc > 1:2211223/1‑93 (MQ=255)
cTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCg < 1:370151/93‑1 (MQ=255)
ccAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTg < 2:1140998/93‑1 (MQ=255)
aGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGa < 2:2240071/93‑1 (MQ=255)
aGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCCGGAGTCGTGGa < 2:689058/93‑1 (MQ=255)
aaCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaa < 2:3139493/93‑1 (MQ=255)
aaCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaa < 1:3292748/93‑1 (MQ=255)
aaCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaa < 1:3025637/93‑1 (MQ=255)
aCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaaa < 2:4372700/93‑1 (MQ=255)
aCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaaa > 2:1441882/1‑93 (MQ=255)
cccTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCACCTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAg < 2:1990158/93‑1 (MQ=255)
tGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATc > 1:2615373/1‑93 (MQ=255)
tGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATc > 1:1079904/1‑93 (MQ=255)
tGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATc < 2:1086957/93‑1 (MQ=255)
cgCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATc < 2:3743104/92‑1 (MQ=255)
gCTCTCCGTCGAAGGGGTGCGCCGCGAGCTTTATCCACAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCa < 2:1054059/93‑1 (MQ=255)
gCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCa > 1:1531733/1‑93 (MQ=255)
ctctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAg > 1:2979048/1‑93 (MQ=255)
ctctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAg < 2:2896893/93‑1 (MQ=255)
ctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGt < 2:3634484/93‑1 (MQ=255)
tCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTa > 1:2572526/1‑93 (MQ=255)
tCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACAGCGAAGCCTTTCCTGGAGCCGTGGATTAAAGATCAGGTCggca > 1:1228556/1‑91 (MQ=255)
cGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTAt < 2:2396425/93‑1 (MQ=255)
gAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTAtt > 1:3637913/1‑93 (MQ=255)
gAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTAtt > 1:4069635/1‑93 (MQ=255)
gAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTAtt > 1:4617881/1‑93 (MQ=255)
aaGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTc > 2:2077320/1‑93 (MQ=255)
aGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTcc > 2:210974/1‑93 (MQ=255)
ggggTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCt < 2:4090152/93‑1 (MQ=255)
ggggTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCt > 1:4309597/1‑93 (MQ=255)
|
AATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTG > NC_000913/4018968‑4019145
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGC > NC_000913/4018964‑4019148
|
GTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTG < SRR4302535.1547272/94‑1 (MQ=60)
AATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGAC < SRR4302535.972681/94‑1 (MQ=60)
AATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGCGTTACTCCAGAAAACCCTGCTCTACGTCGTAAGGGTGGGAC > SRR4302535.538610/1‑94 (MQ=60)
ATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACG < SRR4302535.1754112/94‑1 (MQ=60)
TCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGCAGGGGTGGGACGC > SRR4302535.2429830/1‑94 (MQ=60)
TCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGC > SRR4302535.2761280/1‑94 (MQ=60)
CTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAACCCCTGCTCTACGTCGAAGGGGTGGGACGCC < SRR4302535.1920848/94‑1 (MQ=60)
CTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCC > SRR4302535.1175701/1‑94 (MQ=60)
CTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCC > SRR4302535.2645874/1‑94 (MQ=60)
TGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCA > SRR4302535.2026142/1‑94 (MQ=60)
TTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGT > SRR4302535.704813/1‑94 (MQ=60)
TTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGC > SRR4302535.245763/1‑94 (MQ=60)
TAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTT < SRR4302535.1132557/94‑1 (MQ=60)
TAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTT < SRR4302535.1652619/94‑1 (MQ=60)
AATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTT > SRR4302535.1192628/1‑94 (MQ=60)
AATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTT < SRR4302535.4673879/94‑1 (MQ=60)
AATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTT > SRR4302535.3671688/1‑94 (MQ=60)
TACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAT > SRR4302535.2317077/1‑94 (MQ=60)
TACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAT < SRR4302535.4707878/94‑1 (MQ=60)
CGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCC > SRR4302535.2804853/1‑94 (MQ=60)
CGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCC < SRR4302535.1232501/94‑1 (MQ=60)
GGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCG < SRR4302535.2596163/94‑1 (MQ=60)
GTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACT < SRR4302535.3525090/94‑1 (MQ=60)
GTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACT > SRR4302535.4326651/1‑94 (MQ=60)
GTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACT > SRR4302535.2731466/1‑94 (MQ=60)
CGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCG > SRR4302535.3985431/1‑94 (MQ=60)
GCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGA > SRR4302535.892648/1‑94 (MQ=60)
GCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGA > SRR4302535.1351461/1‑94 (MQ=60)
GCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGA > SRR4302535.2091467/1‑94 (MQ=60)
GCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGA > SRR4302535.753744/1‑94 (MQ=60)
CTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAT > SRR4302535.3510699/1‑94 (MQ=60)
CTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAT < SRR4302535.111340/94‑1 (MQ=60)
TTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATT < SRR4302535.2663782/94‑1 (MQ=60)
TTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATT > SRR4302535.1941759/1‑94 (MQ=60)
TCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTT < SRR4302535.3871279/94‑1 (MQ=60)
CAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTA < SRR4302535.59811/94‑1 (MQ=60)
CAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTA < SRR4302535.2870912/94‑1 (MQ=60)
CAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTA > SRR4302535.2418189/1‑94 (MQ=60)
CAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTA < SRR4302535.2870911/94‑1 (MQ=60)
CAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTA > SRR4302535.1392363/1‑94 (MQ=60)
AATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCTAGCTTTATCCGCAACTCGATTTAT > SRR4302535.4649534/1‑94 (MQ=60)
AATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTAT > SRR4302535.392330/1‑94 (MQ=60)
TATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGG < SRR4302535.1451006/94‑1 (MQ=60)
TATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGG < SRR4302535.2029835/94‑1 (MQ=60)
TGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAA < SRR4302535.3232448/94‑1 (MQ=60)
GGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGCTTTATGGAAA > SRR4302535.1099444/1‑94 (MQ=60)
GGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAA < SRR4302535.1407645/94‑1 (MQ=60)
GAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAA > SRR4302535.746647/1‑94 (MQ=60)
GAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAA < SRR4302535.1785713/94‑1 (MQ=60)
AAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCTAGCTTTATCCGCAACTCGATTTATGGAAAAC < SRR4302535.3201551/94‑1 (MQ=60)
AAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAC < SRR4302535.3980021/94‑1 (MQ=60)
AAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAC < SRR4302535.3977654/94‑1 (MQ=60)
AAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAC > SRR4302535.1871573/1‑94 (MQ=60)
AGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACG > SRR4302535.3486271/1‑94 (MQ=60)
AGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACG > SRR4302535.4442594/1‑94 (MQ=60)
AGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACG < SRR4302535.3232485/94‑1 (MQ=60)
GTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGG < SRR4302535.3005509/94‑1 (MQ=60)
GTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGG < SRR4302535.15382/94‑1 (MQ=60)
GGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGC < SRR4302535.947918/94‑1 (MQ=60)
GCAGCCGCAACTGGTGTTACTCCAGAAAGCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCG < SRR4302535.1667501/94‑1 (MQ=60)
AGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAA > SRR4302535.4040854/1‑94 (MQ=60)
AGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAA > SRR4302535.4545984/1‑94 (MQ=60)
CCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGGCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGG > SRR4302535.1703515/1‑94 (MQ=60)
CCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGC < SRR4302535.2137614/94‑1 (MQ=60)
CGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCC > SRR4302535.1488977/1‑94 (MQ=60)
CGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCC > SRR4302535.55598/1‑94 (MQ=60)
GCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCT > SRR4302535.3207053/1‑94 (MQ=60)
AACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT < SRR4302535.4393002/94‑1 (MQ=60)
AACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT > SRR4302535.3549480/1‑94 (MQ=60)
AACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT > SRR4302535.2306977/1‑94 (MQ=60)
ACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTC < SRR4302535.3741896/94‑1 (MQ=60)
CTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCC < SRR4302535.1338951/94‑1 (MQ=60)
CTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCC < SRR4302535.484465/94‑1 (MQ=60)
TGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCT < SRR4302535.3277226/94‑1 (MQ=60)
TGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCT < SRR4302535.2632216/94‑1 (MQ=60)
TGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCT < SRR4302535.1301978/94‑1 (MQ=60)
GGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTG < SRR4302535.4115526/94‑1 (MQ=60)
GTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGG < SRR4302535.2939335/94‑1 (MQ=60)
TGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGA < SRR4302535.3475958/94‑1 (MQ=60)
TGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGA > SRR4302535.3623425/1‑94 (MQ=60)
GTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAG > SRR4302535.3863631/1‑94 (MQ=60)
GTTACACCAGAAAGCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAG < SRR4302535.1650619/94‑1 (MQ=60)
TACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTC > SRR4302535.2226975/1‑94 (MQ=60)
ACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCG > SRR4302535.2569586/1‑94 (MQ=60)
CTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGT < SRR4302535.372710/94‑1 (MQ=60)
TCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTG < SRR4302535.3362866/94‑1 (MQ=60)
CCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGG > SRR4302535.2640773/1‑94 (MQ=60)
CAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGT > SRR4302535.2800325/1‑94 (MQ=60)
AGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGAT > SRR4302535.2418806/1‑94 (MQ=60)
AAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTA > SRR4302535.4026043/1‑94 (MQ=60)
AACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAA > SRR4302535.1090125/1‑94 (MQ=60)
AACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAA < SRR4302535.3315641/94‑1 (MQ=60)
AACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAA < SRR4302535.3046819/94‑1 (MQ=60)
AACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAA > SRR4302535.4399375/1‑94 (MQ=60)
ACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAG < SRR4302535.4528517/94‑1 (MQ=60)
ACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAA > SRR4302535.1277379/1‑94 (MQ=60)
CCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGA < SRR4302535.1180343/94‑1 (MQ=60)
CTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATC > SRR4302535.1087588/1‑94 (MQ=60)
CTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATC > SRR4302535.2634129/1‑94 (MQ=60)
TGCTCTTCGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAGCGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCA < SRR4302535.3293139/94‑1 (MQ=60)
TGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCA > SRR4302535.1542769/1‑94 (MQ=60)
TGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCA < SRR4302535.2359443/94‑1 (MQ=60)
GCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAG > SRR4302535.2999949/1‑94 (MQ=60)
CTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTC > SRR4302535.4365641/1‑94 (MQ=60)
TACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCG < SRR4302535.434285/94‑1 (MQ=60)
GTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTA < SRR4302535.1539080/94‑1 (MQ=60)
GTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTA > SRR4302535.2591014/1‑94 (MQ=60)
GTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACAGCGAAGCCTTTCCTGGAGCCGTGGATTAAAGATCAGGTCGGCA > SRR4302535.1237335/1‑94 (MQ=60)
TCGAAGGGTTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTAT < SRR4302535.1501414/94‑1 (MQ=60)
CGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATT > SRR4302535.4097486/1‑94 (MQ=60)
CGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATT > SRR4302535.3663118/1‑94 (MQ=60)
CGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATT > SRR4302535.4649264/1‑94 (MQ=60)
GAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTC > SRR4302535.4104617/1‑94 (MQ=60)
AGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCT < SRR4302535.555636/94‑1 (MQ=60)
AGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCT > SRR4302535.4339079/1‑94 (MQ=60)
AGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCT < SRR4302535.2838596/94‑1 (MQ=60)
AGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGAAGTCGTGGCTTAAAGATCAGGTCGGTATTCCT > SRR4302535.2109330/1‑94 (MQ=60)
GTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGC < SRR4302535.2152084/94‑1 (MQ=60)
|
GTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGC > NC_000913/4018964‑4019148
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
