Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,019,057	A→G	V415V (GTA→GTG)	yigR →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,019,057	0	A	G	99.7%	1031.9 / ‑5.3	333	V415V (GTA→GTG)	yigR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (161/171); total (161/172)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.71e-01

Only 100 of 351 total aligned reads displayed.

AAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGC  >  NC_000913/4018967‑4019146

aaaTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTggg                                                                                         >  1:5242637/1‑93 (MQ=255)

aaaTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTggg                                                                                         >  1:46598/1‑93 (MQ=255)

 aaTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGa                                                                                        <  2:2668500/93‑1 (MQ=255)

  aTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGAc                                                                                       >  2:1408525/1‑93 (MQ=255)

   tCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACg                                                                                      >  1:6353892/1‑93 (MQ=255)

     tGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGcc                                                                                    >  1:4410500/1‑93 (MQ=255)

        ttAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGc                                                                                 <  1:3653226/93‑1 (MQ=255)

        ttAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGc                                                                                 >  2:1253996/1‑93 (MQ=255)

          aaTGCGGCGCGTCGCTTCAATATGCAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCtt                                                                               <  2:4475714/93‑1 (MQ=255)

          aaTACGGCGCGTCGCTTCAATATGGAAGTCCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCtt                                                                               <  1:5547732/93‑1 (MQ=255)

           aTACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCttt                                                                              >  1:4234480/1‑93 (MQ=255)

            tgcGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTa                                                                             <  1:530624/91‑1 (MQ=255)

             aCGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAt                                                                            >  1:2634453/1‑93 (MQ=255)

             aCGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAt                                                                            <  1:2671609/93‑1 (MQ=255)

               ggCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATcc                                                                          <  1:3766721/93‑1 (MQ=255)

                  gcgTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCa                                                                       >  1:3363335/1‑93 (MQ=255)

                   cgTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCac                                                                      >  1:5862070/1‑92 (MQ=255)

                   cgTCACTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCTCaa                                                                      >  2:2022792/1‑93 (MQ=255)

                    gTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCGGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAAc                                                                     >  2:7451435/1‑93 (MQ=255)

                       gCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCg                                                                  >  2:5228544/1‑93 (MQ=255)

                       gCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCg                                                                  <  2:2644658/93‑1 (MQ=255)

                        cTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGa                                                                 <  2:5608252/93‑1 (MQ=255)

                         ttCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAt                                                                <  2:4833281/93‑1 (MQ=255)

                         ttCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAt                                                                >  2:5350723/1‑93 (MQ=255)

                         ttCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAt                                                                <  2:4131970/93‑1 (MQ=255)

                          tCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAtt                                                               >  2:604895/1‑93 (MQ=255)

                          tCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAtt                                                               <  1:1499250/93‑1 (MQ=255)

                           cAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAttt                                                              <  1:1344544/93‑1 (MQ=255)

                            aaTATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTa                                                             <  2:5721626/93‑1 (MQ=255)

                            aaTATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTa                                                             >  1:4576738/1‑93 (MQ=255)

                            aaTATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTa                                                             >  1:7455423/1‑93 (MQ=255)

                              tatGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATg                                                           >  2:4975162/1‑93 (MQ=255)

                                tGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGa                                                         >  2:4686634/1‑93 (MQ=255)

                                tGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGa                                                         <  2:6271713/93‑1 (MQ=255)

                                 ggAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaa                                                        <  2:148353/93‑1 (MQ=255)

                                 ggAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaa                                                        >  2:7593930/1‑93 (MQ=255)

                                  gAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaaa                                                       <  2:2548098/93‑1 (MQ=255)

                                   aaGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaaaa                                                      <  2:4643078/93‑1 (MQ=255)

                                    aGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAc                                                     <  2:5994243/93‑1 (MQ=255)

                                    aGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAc                                                     <  2:6375406/93‑1 (MQ=255)

                                      tGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACgg                                                   >  2:288112/1‑93 (MQ=255)

                                       gCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGc                                                  <  2:6838623/93‑1 (MQ=255)

                                       gCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGc                                                  >  1:7176122/1‑93 (MQ=255)

                                          gCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGaa                                               >  1:1200069/1‑93 (MQ=255)

                                             gCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGcc                                            >  1:3492535/1‑93 (MQ=255)

                                             gCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGcc                                            >  1:2263585/1‑93 (MQ=255)

                                              cAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCt                                           >  1:4917052/1‑93 (MQ=255)

                                              cAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCt                                           <  2:1792129/93‑1 (MQ=255)

                                                 cTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTc                                        >  1:1781895/1‑93 (MQ=255)

                                                 cTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTc                                        >  2:678802/1‑93 (MQ=255)

                                                  tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc                                       <  1:1841037/93‑1 (MQ=255)

                                                  tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc                                       >  2:4751355/1‑93 (MQ=255)

                                                  tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc                                       >  1:2392947/1‑93 (MQ=255)

                                                    gtgtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTg                                     >  2:659456/1‑93 (MQ=255)

                                                    gtgtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTg                                     <  1:3915334/93‑1 (MQ=255)

                                                    gtgtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTg                                     >  2:4426095/1‑93 (MQ=255)

                                                     tgtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTgg                                    <  2:228983/93‑1 (MQ=255)

                                                      gtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGa                                   <  2:6885527/93‑1 (MQ=255)

                                                      gtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGa                                   >  2:1055796/1‑93 (MQ=255)

                                                      gtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGa                                   <  2:3086722/93‑1 (MQ=255)

                                                        tACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGt                                 <  2:6965097/93‑1 (MQ=255)

                                                        tACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGt                                 >  2:5065350/1‑93 (MQ=255)

                                                          cTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCg                               >  2:3359223/1‑93 (MQ=255)

                                                           cccAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGt                              <  1:2144277/92‑1 (MQ=255)

                                                             cAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTgg                            <  1:6458185/93‑1 (MQ=255)

                                                               gAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGAt                          <  1:1356913/93‑1 (MQ=255)

                                                                 aaaCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTa                        >  1:7804561/1‑93 (MQ=255)

                                                                   aCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGCAGCCTTTCCTGGAGTCGTGGATTaaa                      >  1:4647196/1‑93 (MQ=255)

                                                                   aCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaaa                      >  2:3879099/1‑93 (MQ=255)

                                                                   aCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaaa                      >  1:893975/1‑93 (MQ=255)

                                                                   aCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaaa                      <  1:2180125/93‑1 (MQ=255)

                                                                   aCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaaa                      <  1:1623185/93‑1 (MQ=255)

                                                                       tGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATc                  <  2:7814145/93‑1 (MQ=255)

                                                                        gCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCa                 >  1:1025900/1‑93 (MQ=255)

                                                                        gCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCa                 <  1:2873993/93‑1 (MQ=255)

                                                                        gCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCa                 <  2:2504487/93‑1 (MQ=255)

                                                                         ctctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAg                <  2:1741477/93‑1 (MQ=255)

                                                                          tctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGTAAAATGGCGAAGCCTTTCCTGGAGTCGTGGTTTAAAGATCAgg               >  1:6005002/1‑93 (MQ=255)

                                                                          tctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAgg               <  2:6670141/93‑1 (MQ=255)

                                                                          tctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAgg               >  2:1940154/1‑93 (MQ=255)

                                                                          tctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAgg               <  1:1890935/93‑1 (MQ=255)

                                                                           ctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGt              >  2:5142711/1‑93 (MQ=255)

                                                                            tACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTc             >  1:3062707/1‑93 (MQ=255)

                                                                            tACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTc             >  1:1397764/1‑93 (MQ=255)

                                                                            tACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTc             <  2:2406326/93‑1 (MQ=255)

                                                                              cGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCgg           >  1:731021/1‑93 (MQ=255)

                                                                               gTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGt          <  1:6595045/93‑1 (MQ=255)

                                                                               gTCGAAGGGGGGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGt          <  1:5649706/93‑1 (MQ=255)

                                                                                tCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTa         <  1:6238451/93‑1 (MQ=255)

                                                                                 cGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTAt        <  1:7100322/93‑1 (MQ=255)

                                                                                  gAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGCGGATTAAAGATCAGGTCGGTAtt       >  2:772687/1‑93 (MQ=255)

                                                                                   aaGGGGTGGGACGCCAGCTTTATCCGCAACTCGTTTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTc      <  1:7639983/93‑1 (MQ=255)

                                                                                   aaGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTc      >  1:6137699/1‑93 (MQ=255)

                                                                                   aaGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTc      <  2:7231657/93‑1 (MQ=255)

                                                                                   aaGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTAGGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTc      <  2:4048859/93‑1 (MQ=255)

                                                                                    aGGGGTGGGGCGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTcc     <  2:7128184/93‑1 (MQ=255)

                                                                                    aGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTcc     <  2:5465639/93‑1 (MQ=255)

                                                                                     ggggTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCt    <  2:6525149/93‑1 (MQ=255)

                                                                                     ggggTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCt    <  1:6886979/93‑1 (MQ=255)

                                                                                      gggTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTg   <  1:4391525/93‑1 (MQ=255)

AAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGC  >  NC_000913/4018967‑4019146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTG  >  NC_000913/4018964‑4019150

GTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTG                                                                                                >  SRR4302543.6162160/1‑94 (MQ=60)

GTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTG                                                                                                >  SRR4302543.6162159/1‑94 (MQ=60)

GTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTG                                                                                                <  SRR4302543.3699556/94‑1 (MQ=60)

 TTAAATCTTTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGG                                                                                               <  SRR4302543.5941357/94‑1 (MQ=60)

 TTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGG                                                                                               <  SRR4302543.4896964/94‑1 (MQ=60)

 TTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGG                                                                                               <  SRR4302543.3069459/94‑1 (MQ=60)

 TTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGG                                                                                               <  SRR4302543.3393558/94‑1 (MQ=60)

  TAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGG                                                                                              >  SRR4302543.5289892/1‑94 (MQ=60)

  TAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGG                                                                                              >  SRR4302543.47025/1‑94 (MQ=60)

   AAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGA                                                                                             >  SRR4302543.2320552/1‑94 (MQ=60)

    AATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGAC                                                                                            >  SRR4302543.2076083/1‑94 (MQ=60)

    AATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGAC                                                                                            >  SRR4302543.4692269/1‑94 (MQ=60)

    AATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGAC                                                                                            >  SRR4302543.4692268/1‑94 (MQ=60)

     ATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAATGGGTGGGACG                                                                                           >  SRR4302543.2975891/1‑94 (MQ=60)

     ATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACG                                                                                           >  SRR4302543.6715220/1‑94 (MQ=60)

     ATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACG                                                                                           >  SRR4302543.6413637/1‑94 (MQ=60)

     ATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACG                                                                                           >  SRR4302543.1599063/1‑94 (MQ=60)

       CTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCC                                                                                         >  SRR4302543.4450474/1‑94 (MQ=60)

       CTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCC                                                                                         >  SRR4302543.6348364/1‑94 (MQ=60)

       CTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCC                                                                                         >  SRR4302543.7780263/1‑94 (MQ=60)

        TGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCA                                                                                        <  SRR4302543.4330832/94‑1 (MQ=60)

        TGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCA                                                                                        >  SRR4302543.1402961/1‑94 (MQ=60)

        TGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTACACGTCGAAGGGGTAGGACGCCA                                                                                        <  SRR4302543.1405227/94‑1 (MQ=60)

          TTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGT                                                                                      >  SRR4302543.3912295/1‑94 (MQ=60)

           TTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCT                                                                                     <  SRR4302543.3685320/94‑1 (MQ=60)

            TAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCACCTT                                                                                    >  SRR4302543.6490546/1‑94 (MQ=60)

             AATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTTGGACGCCAGCTTT                                                                                   >  SRR4302543.7882624/1‑94 (MQ=60)

             AATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTT                                                                                   >  SRR4302543.4272890/1‑94 (MQ=60)

             AATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTT                                                                                   <  SRR4302543.3879366/94‑1 (MQ=60)

             AATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTT                                                                                   <  SRR4302543.1424111/94‑1 (MQ=60)

             AATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTT                                                                                   >  SRR4302543.2228940/1‑94 (MQ=60)

             AATACGGCGCGTCGCTTCAATATGGAAGTCCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTT                                                                                   <  SRR4302543.5598184/94‑1 (MQ=60)

              ATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTA                                                                                  <  SRR4302543.1828863/94‑1 (MQ=60)

              ATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTA                                                                                  >  SRR4302543.3119137/1‑94 (MQ=60)

              ATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTA                                                                                  >  SRR4302543.5647815/1‑94 (MQ=60)

               TGCGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAT                                                                                 <  SRR4302543.535537/94‑1 (MQ=60)

               TACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTGCTCCAGAAATCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAT                                                                                 <  SRR4302543.7650561/94‑1 (MQ=60)

               TACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAT                                                                                 >  SRR4302543.2658305/1‑94 (MQ=60)

                ACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCTAGCTTTATC                                                                                >  SRR4302543.7519893/1‑94 (MQ=60)

                ACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATC                                                                                <  SRR4302543.6291008/94‑1 (MQ=60)

                ACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATC                                                                                <  SRR4302543.2695835/94‑1 (MQ=60)

                 CGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCC                                                                               >  SRR4302543.3100312/1‑94 (MQ=60)

                 CGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCC                                                                               <  SRR4302543.2833299/94‑1 (MQ=60)

                  GGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCG                                                                              <  SRR4302543.3799878/94‑1 (MQ=60)

                  GGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCG                                                                              >  SRR4302543.5142279/1‑94 (MQ=60)

                    CGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCA                                                                            <  SRR4302543.4981712/94‑1 (MQ=60)

                    CGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCA                                                                            >  SRR4302543.3393575/1‑94 (MQ=60)

                     GCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAC                                                                           >  SRR4302543.5915424/1‑94 (MQ=60)

                     GCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAA                                                                           >  SRR4302543.6108656/1‑94 (MQ=60)

                      CGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAAC                                                                          >  SRR4302543.1103560/1‑94 (MQ=60)

                       GTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACT                                                                         >  SRR4302543.2530633/1‑94 (MQ=60)

                       GTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACT                                                                         >  SRR4302543.7507770/1‑94 (MQ=60)

                         CGCTTCAATATGGAAGTGCAGCCGAAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCG                                                                       <  SRR4302543.2377434/94‑1 (MQ=60)

                          GCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGT                                                                      >  SRR4302543.2190227/1‑94 (MQ=60)

                          GCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGA                                                                      >  SRR4302543.3000512/1‑94 (MQ=60)

                            TTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATT                                                                    <  SRR4302543.5866890/94‑1 (MQ=60)

                             TCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTT                                                                   <  SRR4302543.1512735/94‑1 (MQ=60)

                             TCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTT                                                                   <  SRR4302543.1365407/94‑1 (MQ=60)

                              CAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTA                                                                  >  SRR4302543.7526848/1‑94 (MQ=60)

                              CAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTA                                                                  >  SRR4302543.7526851/1‑94 (MQ=60)

                              CAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTA                                                                  >  SRR4302543.4618344/1‑94 (MQ=60)

                              CAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTA                                                                  <  SRR4302543.1356557/94‑1 (MQ=60)

                               AATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTAT                                                                 <  SRR4302543.3592745/94‑1 (MQ=60)

                               AATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTAT                                                                 >  SRR4302543.7797790/1‑94 (MQ=60)

                               AATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTAT                                                                 >  SRR4302543.71355/1‑94 (MQ=60)

                               AATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTAT                                                                 <  SRR4302543.1550492/94‑1 (MQ=60)

                                ATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATG                                                                <  SRR4302543.3503058/94‑1 (MQ=60)

                                   TGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAA                                                             <  SRR4302543.1797935/94‑1 (MQ=60)

                                    GGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAA                                                            <  SRR4302543.4491512/94‑1 (MQ=60)

                                    GGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAA                                                            >  SRR4302543.5446224/1‑94 (MQ=60)

                                    GGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAA                                                            <  SRR4302543.5988811/94‑1 (MQ=60)

                                      GAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAC                                                          <  SRR4302543.2665954/94‑1 (MQ=60)

                                      AAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAC                                                          <  SRR4302543.4083925/94‑1 (MQ=60)

                                      AAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCACAACTCGATTTATGGAAAAC                                                          >  SRR4302543.1665719/1‑94 (MQ=60)

                                       AGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACG                                                         <  SRR4302543.3329135/94‑1 (MQ=60)

                                       AGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACG                                                         <  SRR4302543.3431201/94‑1 (MQ=60)

                                       AGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACG                                                         <  SRR4302543.6538387/94‑1 (MQ=60)

                                       AGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACG                                                         <  SRR4302543.5322227/94‑1 (MQ=60)

                                         TGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGC                                                       >  SRR4302543.7245787/1‑94 (MQ=60)

                                          GCAGCCGCAACTGGTGGTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCG                                                      <  SRR4302543.2264765/94‑1 (MQ=60)

                                            AGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAA                                                    >  SRR4302543.1210872/1‑94 (MQ=60)

                                             GCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAGCTCGATTTATGGAAAACGGCGAAG                                                   <  SRR4302543.6465366/94‑1 (MQ=60)

                                             GCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAG                                                   <  SRR4302543.5554510/94‑1 (MQ=60)

                                               CGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCC                                                 >  SRR4302543.5428200/1‑94 (MQ=60)

                                               CGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCC                                                 >  SRR4302543.2284241/1‑94 (MQ=60)

                                               CGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCC                                                 >  SRR4302543.1183071/1‑94 (MQ=60)

                                               CGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCC                                                 >  SRR4302543.3523793/1‑94 (MQ=60)

                                               CGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACCCGATTTATGGAAAACGGCGAAGCC                                                 >  SRR4302543.4436860/1‑94 (MQ=60)

                                                GCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCT                                                <  SRR4302543.5708035/94‑1 (MQ=60)

                                                GCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCT                                                >  SRR4302543.4961850/1‑94 (MQ=60)

                                                 CAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGACTT                                               >  SRR4302543.1724596/1‑94 (MQ=60)

                                                  CACTGGTGTTACTCCAGAAAACCCTGCTCTTCGTTGAAGGGATGGGACGCCATCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT                                              <  SRR4302543.2217620/94‑1 (MQ=60)

                                                  AACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT                                              <  SRR4302543.1966179/94‑1 (MQ=60)

                                                  AACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT                                              <  SRR4302543.2217621/94‑1 (MQ=60)

                                                  AACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT                                              >  SRR4302543.4038311/1‑94 (MQ=60)

                                                  AACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGAGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT                                              >  SRR4302543.6621369/1‑94 (MQ=60)

                                                   ACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑C                                            >  SRR4302543.4539724/1‑94 (MQ=60)

                                                   ACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑C                                            >  SRR4302543.1797828/1‑94 (MQ=60)

                                                   ACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑C                                            <  SRR4302543.7330288/94‑1 (MQ=60)

                                                    CTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CC                                           >  SRR4302543.2414599/1‑94 (MQ=60)

                                                     TGGTGTTACTCCAGACAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCT                                          <  SRR4302543.7096675/94‑1 (MQ=60)

                                                     TGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCT                                          >  SRR4302543.1861626/1‑94 (MQ=60)

                                                     TGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCT                                          <  SRR4302543.1857599/94‑1 (MQ=60)

                                                      GGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGGGGGACGCCAGCTTTATCCGCAACTCGATTTATGGCAAACGGCGAAGCCTTT‑CCTG                                         >  SRR4302543.6383360/1‑94 (MQ=60)

                                                       GTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGG                                        <  SRR4302543.2686968/94‑1 (MQ=60)

                                                       GTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGG                                        <  SRR4302543.7912602/94‑1 (MQ=60)

                                                       GTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGG                                        <  SRR4302543.3949893/94‑1 (MQ=60)

                                                       GTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCCCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGG                                        <  SRR4302543.6680562/94‑1 (MQ=60)

                                                        TGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGA                                       <  SRR4302543.4693922/94‑1 (MQ=60)

                                                        TGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGA                                       <  SRR4302543.5764794/94‑1 (MQ=60)

                                                         GTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAG                                      <  SRR4302543.217171/94‑1 (MQ=60)

                                                         GTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAG                                      >  SRR4302543.3805912/1‑94 (MQ=60)

                                                         GTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAG                                      <  SRR4302543.184072/94‑1 (MQ=60)

                                                           TACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTC                                    <  SRR4302543.4409652/94‑1 (MQ=60)

                                                           TACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTC                                    <  SRR4302543.1866367/94‑1 (MQ=60)

                                                            ACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCG                                   <  SRR4302543.1451666/94‑1 (MQ=60)

                                                              TCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTG                                 <  SRR4302543.4674497/94‑1 (MQ=60)

                                                              CCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTG                                 <  SRR4302543.2163475/94‑1 (MQ=60)

                                                               CCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGG                                >  SRR4302543.7986417/1‑94 (MQ=60)

                                                                CAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCGGCACCTCGATTTATGGAAAAGGGCGAAGCCTTT‑CCGGGAGTCGTGGT                               >  SRR4302543.3797130/1‑94 (MQ=60)

                                                                CAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGA                               <  SRR4302543.6519038/94‑1 (MQ=60)

                                                                 CGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGAT                              <  SRR4302543.1568448/94‑1 (MQ=60)

                                                                 AGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGAT                              >  SRR4302543.2059658/1‑94 (MQ=60)

                                                                 AGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGAT                              <  SRR4302543.7275025/94‑1 (MQ=60)

                                                                  GAAAGCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATT                             <  SRR4302543.1369051/94‑1 (MQ=60)

                                                                  GAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATT                             <  SRR4302543.1369052/94‑1 (MQ=60)

                                                                   AAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTA                            >  SRR4302543.7878133/1‑94 (MQ=60)

                                                                    AAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAA                           <  SRR4302543.6648539/94‑1 (MQ=60)

                                                                    AAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAA                           >  SRR4302543.7188305/1‑94 (MQ=60)

                                                                     ACCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAA                          <  SRR4302543.6120954/94‑1 (MQ=60)

                                                                     AACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGCAGCCTTT‑CCTGGAGTCGTGGATTAAA                          >  SRR4302543.4689479/1‑94 (MQ=60)

                                                                     AACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAA                          >  SRR4302543.901873/1‑94 (MQ=60)

                                                                     AACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAA                          >  SRR4302543.4689478/1‑94 (MQ=60)

                                                                     AACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAA                          <  SRR4302543.5326423/94‑1 (MQ=60)

                                                                      ACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAG                         <  SRR4302543.1637650/94‑1 (MQ=60)

                                                                      ACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAG                         <  SRR4302543.2199672/94‑1 (MQ=60)

                                                                      ACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAG                         <  SRR4302543.2513247/94‑1 (MQ=60)

                                                                       CCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGA                        <  SRR4302543.1309587/94‑1 (MQ=60)

                                                                       CCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGA                        <  SRR4302543.1256840/94‑1 (MQ=60)

                                                                       CCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGA                        >  SRR4302543.951763/1‑94 (MQ=60)

                                                                        CCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGAT                       <  SRR4302543.4355309/94‑1 (MQ=60)

                                                                         CTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATC                      <  SRR4302543.6297507/94‑1 (MQ=60)

                                                                         CTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATC                      >  SRR4302543.7550402/1‑94 (MQ=60)

                                                                          TGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCA                     >  SRR4302543.1034988/1‑94 (MQ=60)

                                                                           GCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAG                    >  SRR4302543.4756602/1‑94 (MQ=60)

                                                                           GCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAG                    <  SRR4302543.2900154/94‑1 (MQ=60)

                                                                           GCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAG                    <  SRR4302543.7185923/94‑1 (MQ=60)

                                                                            GTCTAAGTCGAAAGGGTGGGACGCCAGCTTTAGCCGTAAATCGGTTTATTGAAAACGGCGAAGCCTTTCCCTGGAGTCGTGGATTAAAGATCAG                    <  SRR4302543.4148656/94‑1 (MQ=44)

                                                                            CTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGTAAAATGGCGAAGCCTTT‑CCTGGAGTCGTGGTTTAAAGATCAGG                   >  SRR4302543.6060243/1‑94 (MQ=60)

                                                                            CTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGTCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGG                   >  SRR4302543.1342879/1‑94 (MQ=60)

                                                                            CTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGG                   >  SRR4302543.6079474/1‑94 (MQ=60)

                                                                            CTCTACGTCGAAGGGGTGGGACGCCAGCTTGATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTAGAGTCGTGGATTAAAGATCAGG                   <  SRR4302543.2767396/94‑1 (MQ=60)

                                                                             TCTACGTCGAAGGGGTGGGACGCGAGCTTTATCCGCAACTCAATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGT                  <  SRR4302543.5021809/94‑1 (MQ=60)

                                                                             TCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGT                  <  SRR4302543.1907936/94‑1 (MQ=60)

                                                                             TCTACGTCGAAGGGGTGGGACGCAAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGT                  <  SRR4302543.3574111/94‑1 (MQ=60)

                                                                              CTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTC                 >  SRR4302543.3090254/1‑94 (MQ=60)

                                                                              CTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTC                 <  SRR4302543.6021046/94‑1 (MQ=60)

                                                                              CTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTC                 >  SRR4302543.1410369/1‑94 (MQ=60)

                                                                              CTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTC                 <  SRR4302543.2890708/94‑1 (MQ=60)

                                                                                ACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGG               >  SRR4302543.737573/1‑94 (MQ=60)

                                                                                 CGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGT              >  SRR4302543.5624512/1‑94 (MQ=60)

                                                                                 CGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGT              >  SRR4302543.1384195/1‑94 (MQ=60)

                                                                                  GTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTA             >  SRR4302543.3704423/1‑94 (MQ=60)

                                                                                  GTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTA             >  SRR4302543.4715883/1‑94 (MQ=60)

                                                                                  GTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTA             <  SRR4302543.4482622/94‑1 (MQ=60)

                                                                                  GTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTA             <  SRR4302543.6657188/94‑1 (MQ=60)

                                                                                  GTCGAAGGGGGGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTA             <  SRR4302543.5701208/94‑1 (MQ=60)

                                                                                   TCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTAT            <  SRR4302543.6297319/94‑1 (MQ=60)

                                                                                   TCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTAT            <  SRR4302543.3525055/94‑1 (MQ=60)

                                                                                    CGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATT           >  SRR4302543.6244879/1‑94 (MQ=60)

                                                                                    CGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATT           <  SRR4302543.7169273/94‑1 (MQ=60)

                                                                                     GAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTC          >  SRR4302543.6195839/1‑94 (MQ=60)

                                                                                      AAGGGGTGGGACGCCAGCTTTATCCGCAACTCGTTTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCC         <  SRR4302543.7712456/94‑1 (MQ=60)

                                                                                      AAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCC         >  SRR4302543.444491/1‑94 (MQ=60)

                                                                                        GGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTG       <  SRR4302543.6951753/94‑1 (MQ=60)

                                                                                         GGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGC      <  SRR4302543.7074643/94‑1 (MQ=60)

                                                                                         GGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGC      <  SRR4302543.4431331/94‑1 (MQ=60)

                                                                                         GGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGC      <  SRR4302543.7377625/94‑1 (MQ=60)

                                                                                          GGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGACATT‑CCTGGAGTCCTGGATTAAAGATCAGGTCGGTATTCCTacc     >  SRR4302543.1644285/1‑91 (MQ=60)

                                                                                           GTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGC    >  SRR4302543.3289759/1‑94 (MQ=60)

                                                                                           GTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGC    >  SRR4302543.4306546/1‑94 (MQ=60)

                                                                                            TGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCT   >  SRR4302543.5648907/1‑94 (MQ=60)

                                                                                             GGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTG  <  SRR4302543.2035606/94‑1 (MQ=60)

GTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTT‑CCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTG  >  NC_000913/4018964‑4019150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`