Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,043,237 |
A→G |
intergenic (+28/+13) |
b3861 → / ← yihG |
putative GTP‑binding protein/putative endonuclease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,043,237 | 0 | A | G | 100.0%
| 833.4
/ NA
| 258 | intergenic (+28/+13) | b3861/yihG | putative GTP‑binding protein/putative endonuclease |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (132/126); total (132/126) |
Only 100 of 280 total aligned reads displayed.
TTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATT > NC_000913/4043147‑4043326
|
tttAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAgggg < 1:893002/93‑1 (MQ=255)
tttAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAgggg < 1:1446416/93‑1 (MQ=255)
tttAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAgggg < 1:2936884/93‑1 (MQ=255)
aaCGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGa < 1:4316043/93‑1 (MQ=255)
aaCGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGa < 1:4199652/93‑1 (MQ=255)
aCGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAg < 1:2292808/93‑1 (MQ=255)
cGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGt < 2:4001696/93‑1 (MQ=255)
cGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGt > 1:2084700/1‑93 (MQ=255)
cGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGt < 1:3330346/93‑1 (MQ=255)
gACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTaa < 1:789792/93‑1 (MQ=255)
gACAGCAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCCCTCGCCTCTGCTCATTCAGGGGCGAGTaa > 2:2969506/1‑93 (MQ=255)
aCAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTaaa < 1:2877753/93‑1 (MQ=255)
cAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTaaaa > 1:4622772/1‑93 (MQ=255)
cAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTaaaa < 1:2773797/93‑1 (MQ=255)
aGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAac < 2:1121431/93‑1 (MQ=255)
aGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAac > 2:142625/1‑93 (MQ=255)
aGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATCAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAac < 1:2515594/93‑1 (MQ=255)
ggAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAact > 1:682029/1‑93 (MQ=255)
ggAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAact < 2:4182826/93‑1 (MQ=255)
ggAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAact > 1:4153239/1‑93 (MQ=255)
gaTGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGGAAAacttac > 1:3563566/1‑93 (MQ=255)
tGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAacttactt < 2:716634/93‑1 (MQ=255)
tGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAacttactt > 1:3616886/1‑93 (MQ=255)
gAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAActtactta < 2:3659244/93‑1 (MQ=255)
gAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAActtactta < 2:1526019/93‑1 (MQ=255)
gCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTAtt < 2:2039821/93‑1 (MQ=255)
cGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTc < 1:1011720/93‑1 (MQ=255)
cGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTc < 1:3212722/93‑1 (MQ=255)
gaagaagaaTTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCt < 1:1371491/93‑1 (MQ=255)
caagaagaaTTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCt < 2:847612/92‑1 (MQ=255)
agaagaaTTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGa > 1:4591489/1‑93 (MQ=255)
gaagaaTTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGAc > 1:2208271/1‑93 (MQ=255)
agaaTTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGc > 2:4048695/1‑93 (MQ=255)
agaaTTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGc > 1:33799/1‑93 (MQ=255)
aaTTTATGTCTCGTGCCGGACGTTTTGTTCATTTAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCtg > 1:2815202/1‑93 (MQ=255)
aaTTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCtg > 2:1349943/1‑93 (MQ=255)
aTTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCtgt > 2:2285118/1‑93 (MQ=255)
tttATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCtgtg > 2:3731430/1‑93 (MQ=255)
ttATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGtga < 2:1681858/93‑1 (MQ=255)
ttATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGtga < 2:3147719/93‑1 (MQ=255)
ttATGTCTCGTGCCGGACGCTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGtga > 2:4547699/1‑93 (MQ=255)
tATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCCTTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGtgat > 2:1226385/1‑93 (MQ=255)
tATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGtgat > 2:261275/1‑93 (MQ=255)
tATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGtgat < 2:3451958/93‑1 (MQ=255)
tGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGtgatga < 1:968712/93‑1 (MQ=255)
tctcGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACa < 2:2218154/93‑1 (MQ=255)
ctcGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACAt < 2:2855351/93‑1 (MQ=255)
cGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATga < 2:3075317/93‑1 (MQ=255)
tGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATgaga > 1:1531529/1‑93 (MQ=255)
tGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATgaga < 2:2133977/93‑1 (MQ=255)
tGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATgaga < 2:3906920/93‑1 (MQ=255)
cGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGAc > 2:3132068/1‑93 (MQ=255)
cGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGAc < 1:940421/93‑1 (MQ=255)
cGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGAc > 1:3429736/1‑93 (MQ=255)
ggACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACg > 1:2550525/1‑93 (MQ=255)
gACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGt > 2:4383200/1‑93 (MQ=255)
gACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGt > 2:4409145/1‑93 (MQ=255)
gACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAAATTACTTATTCTGACGCTGTGATGACATGAGAGACGt > 1:1122625/1‑93 (MQ=255)
cGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCa > 1:3736981/1‑93 (MQ=255)
ttttGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGa > 1:3272185/1‑93 (MQ=255)
tttGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGaa < 2:271234/93‑1 (MQ=255)
tttGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGaa > 2:3952235/1‑93 (MQ=255)
ttGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAg > 2:3332190/1‑93 (MQ=255)
tGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGc < 2:2330228/93‑1 (MQ=255)
tGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGc < 1:516257/93‑1 (MQ=255)
gTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGcc < 1:2681849/93‑1 (MQ=255)
gTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGcc > 1:2958257/1‑93 (MQ=255)
ttCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCg > 1:232807/1‑93 (MQ=255)
ttCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCg > 1:863778/1‑93 (MQ=255)
aTTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTc > 2:3242204/1‑93 (MQ=255)
aaaaTACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCttt > 1:61843/1‑93 (MQ=255)
aaaaTACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCttt < 1:1266435/93‑1 (MQ=255)
aaaTACTCCCTCGCCTCTGCTCATTCAGGGTCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCtttt < 2:2583077/93‑1 (MQ=255)
aaaTACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCtttt < 2:3424586/93‑1 (MQ=255)
aaaTACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCtttt > 2:431643/1‑93 (MQ=255)
aaaactcactcGCCTCTGCTCATTCAGGGGCGAATAAAACTTGCTTATTCTGACGCTGTGATTACATGAGAGGCGTCAAAAGCCGTTCttttt < 2:638185/90‑1 (MQ=255)
aaTACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCttttt < 2:3819609/93‑1 (MQ=255)
aTACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTc > 1:692608/1‑93 (MQ=255)
tACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTcc < 2:4657532/93‑1 (MQ=255)
ctcactcGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTg > 2:3628601/1‑93 (MQ=255)
ctcactcGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTg > 1:3803432/1‑93 (MQ=255)
tcactcGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGc > 2:2800871/1‑93 (MQ=255)
tcactcGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGc > 1:4133520/1‑93 (MQ=255)
cactcGCCTCTGCTCATTCAGGGGCGAGTAAAACTTCCTTATTCTGACGCTGTGATGACATGAGAGAGTTCAGAAGCCGGTCTTTTTCCTGcc < 2:2486284/93‑1 (MQ=255)
cctcGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCca < 2:1578674/92‑1 (MQ=255)
tcGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCcaca > 1:4265133/1‑93 (MQ=255)
cGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACaa < 1:1723988/93‑1 (MQ=255)
gCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAAt < 1:4680439/93‑1 (MQ=255)
gCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAAt > 1:2243393/1‑93 (MQ=255)
ctctGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGa < 1:1062082/93‑1 (MQ=255)
ctctGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGa > 1:1976336/1‑93 (MQ=255)
tctGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAg > 2:179448/1‑93 (MQ=255)
ctGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGt < 1:3698831/93‑1 (MQ=255)
ctGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGt < 2:2426139/93‑1 (MQ=255)
tGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGtt > 2:2760915/1‑93 (MQ=255)
cTCATTCAGGGGCGAGTAAAACTTACTTATCCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCa < 1:2714648/93‑1 (MQ=255)
cATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGc < 2:3513400/93‑1 (MQ=255)
aTTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGcc < 1:3896812/93‑1 (MQ=255)
ttCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCa < 1:1645826/93‑1 (MQ=255)
ttCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGACa > 2:3863631/1‑93 (MQ=255)
|
TTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATT > NC_000913/4043147‑4043326
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCT > NC_000913/4043144‑4043329
|
GTTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGG < SRR4302535.830938/94‑1 (MQ=60)
GTTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGG < SRR4302535.4391286/94‑1 (MQ=60)
TTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATTCTCCCTCGCCTCTGCTCATTCAGGG < SRR4302535.881955/94‑1 (MQ=60)
TTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGG < SRR4302535.2493651/94‑1 (MQ=60)
TTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTAGGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGG < SRR4302535.1641748/94‑1 (MQ=60)
TTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGG < SRR4302535.1695525/94‑1 (MQ=60)
TTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGG < SRR4302535.3924657/94‑1 (MQ=60)
TTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGC < SRR4302535.899330/94‑1 (MQ=60)
TTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGC < SRR4302535.2957548/94‑1 (MQ=60)
TTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGC < SRR4302535.1456761/94‑1 (MQ=60)
TTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCG < SRR4302535.1379092/94‑1 (MQ=60)
TTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCG < SRR4302535.3556931/94‑1 (MQ=60)
AACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAG < SRR4302535.2045842/94‑1 (MQ=60)
AACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAG < SRR4302535.4228390/94‑1 (MQ=60)
AACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAG < SRR4302535.4345569/94‑1 (MQ=60)
AACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAG < SRR4302535.4467441/94‑1 (MQ=60)
AACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAG < SRR4302535.3391461/94‑1 (MQ=60)
ACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGT < SRR4302535.2309208/94‑1 (MQ=60)
ACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGT > SRR4302535.2099715/1‑94 (MQ=60)
ACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGAGAGT > SRR4302535.933768/1‑94 (MQ=60)
CGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTA < SRR4302535.2293380/94‑1 (MQ=60)
CGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTA < SRR4302535.3353526/94‑1 (MQ=60)
GGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTAGCCTCTGCTCATTCAGGGGCGAGTAA > SRR4302535.2407903/1‑94 (MQ=60)
GACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAA < SRR4302535.4670387/94‑1 (MQ=60)
GACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAA < SRR4302535.65325/94‑1 (MQ=60)
GACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAA < SRR4302535.3413516/94‑1 (MQ=60)
GACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAA < SRR4302535.795334/94‑1 (MQ=60)
ACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAA > SRR4302535.4654171/1‑94 (MQ=60)
ACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAA < SRR4302535.2898132/94‑1 (MQ=60)
ACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAA < SRR4302535.2972014/94‑1 (MQ=60)
CAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAAC < SRR4302535.2793549/94‑1 (MQ=60)
AGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACT > SRR4302535.686803/1‑94 (MQ=60)
AGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACT > SRR4302535.4181678/1‑94 (MQ=60)
AGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACT < SRR4302535.508756/94‑1 (MQ=60)
AGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATCAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACT < SRR4302535.2533726/94‑1 (MQ=60)
GAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTA > SRR4302535.4343058/1‑94 (MQ=60)
AGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGGAAAACTTAC > SRR4302535.3588273/1‑94 (MQ=60)
ATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTT > SRR4302535.3641959/1‑94 (MQ=60)
TGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTA < SRR4302535.4316862/94‑1 (MQ=60)
GCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTC < SRR4302535.2900850/94‑1 (MQ=60)
CGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCT < SRR4302535.3234973/94‑1 (MQ=60)
CGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCT < SRR4302535.1018909/94‑1 (MQ=60)
GAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTG < SRR4302535.2895738/94‑1 (MQ=60)
GAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTG < SRR4302535.1381288/94‑1 (MQ=60)
GAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTG > SRR4302535.2763897/1‑94 (MQ=60)
GAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTG > SRR4302535.270946/1‑94 (MQ=60)
GAAGAAGAATTTATGT‑TCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGA < SRR4302535.2335135/94‑1 (MQ=60)
AAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGA > SRR4302535.4622744/1‑94 (MQ=60)
AGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGAC < SRR4302535.660100/94‑1 (MQ=60)
AGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGAC > SRR4302535.2224001/1‑94 (MQ=60)
GAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACG < SRR4302535.3847091/94‑1 (MQ=60)
AAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGC > SRR4302535.2327661/1‑94 (MQ=60)
AAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGC > SRR4302535.34060/1‑94 (MQ=60)
AGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCT < SRR4302535.3271496/94‑1 (MQ=60)
GAATTTATGTCTCGTGCCGGACGTTTTGTTCATTTAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTG > SRR4302535.2835203/1‑94 (MQ=60)
GAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTGATTCAGGGGCGAGTAAAACTTACTTATTCTGAGGCTG > SRR4302535.3827978/1‑94 (MQ=60)
ATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTG < SRR4302535.3625205/94‑1 (MQ=60)
TTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGA < SRR4302535.894069/94‑1 (MQ=60)
TTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGAT < SRR4302535.4098371/94‑1 (MQ=60)
TTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGAT < SRR4302535.862041/94‑1 (MQ=60)
TTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGAT > SRR4302535.3633834/1‑94 (MQ=60)
ATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGA < SRR4302535.2274883/94‑1 (MQ=60)
TGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGAC < SRR4302535.4652341/94‑1 (MQ=60)
TGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGAC < SRR4302535.975594/94‑1 (MQ=60)
TCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACAT < SRR4302535.4501176/94‑1 (MQ=60)
TCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACAT > SRR4302535.1763648/1‑94 (MQ=60)
TCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGA < SRR4302535.1506586/94‑1 (MQ=60)
CGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAG > SRR4302535.1087317/1‑94 (MQ=60)
GTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGA < SRR4302535.580433/94‑1 (MQ=60)
GTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGA > SRR4302535.1542565/1‑94 (MQ=60)
CCGGCCGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGAC < SRR4302535.95460/94‑1 (MQ=60)
CCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGAC < SRR4302535.1254110/94‑1 (MQ=60)
CCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGAC < SRR4302535.3664860/94‑1 (MQ=60)
CCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGAC > SRR4302535.3220574/1‑94 (MQ=60)
CCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGAC > SRR4302535.3453574/1‑94 (MQ=60)
CGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACG < SRR4302535.947077/94‑1 (MQ=60)
CGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACG > SRR4302535.815481/1‑94 (MQ=60)
CGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACG > SRR4302535.2568887/1‑94 (MQ=60)
GGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGT > SRR4302535.726118/1‑94 (MQ=60)
GGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGT > SRR4302535.351834/1‑94 (MQ=60)
GGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAAATTACTTATTCTGACGCTGTGATGACATGAGAGACGT > SRR4302535.1130636/1‑94 (MQ=60)
GACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTC > SRR4302535.1569043/1‑94 (MQ=60)
ACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCA > SRR4302535.3762845/1‑94 (MQ=60)
CGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAG < SRR4302535.690137/94‑1 (MQ=60)
CGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAG < SRR4302535.4208833/94‑1 (MQ=60)
GTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGA > SRR4302535.3396233/1‑94 (MQ=60)
GTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGA > SRR4302535.3294918/1‑94 (MQ=60)
TTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAA > SRR4302535.262450/1‑94 (MQ=60)
TTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGC < SRR4302535.2800993/94‑1 (MQ=60)
TGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCC < SRR4302535.2934329/94‑1 (MQ=60)
TGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCC < SRR4302535.519866/94‑1 (MQ=60)
TGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCC > SRR4302535.2979032/1‑94 (MQ=60)
GTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCG > SRR4302535.234412/1‑94 (MQ=60)
GTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCG < SRR4302535.469282/94‑1 (MQ=60)
GTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCG > SRR4302535.869882/1‑94 (MQ=60)
GTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCG < SRR4302535.2701033/94‑1 (MQ=60)
TTCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGG > SRR4302535.1734859/1‑94 (MQ=60)
TCATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGT > SRR4302535.4271956/1‑94 (MQ=60)
CATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTC < SRR4302535.3403930/94‑1 (MQ=60)
CATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTC > SRR4302535.2711532/1‑94 (MQ=60)
ATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCT > SRR4302535.916942/1‑94 (MQ=60)
ATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCT > SRR4302535.4242005/1‑94 (MQ=60)
ATTAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCT > SRR4302535.221585/1‑94 (MQ=60)
TAAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTT > SRR4302535.62306/1‑94 (MQ=60)
AAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTT < SRR4302535.1275493/94‑1 (MQ=60)
AAAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTT > SRR4302535.61562/1‑94 (MQ=60)
AAATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTT < SRR4302535.306234/94‑1 (MQ=60)
AATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTC > SRR4302535.697460/1‑94 (MQ=60)
AATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTC < SRR4302535.3341975/94‑1 (MQ=60)
ATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCC > SRR4302535.4174718/1‑94 (MQ=60)
ATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCC < SRR4302535.2230347/94‑1 (MQ=60)
ATACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCC < SRR4302535.2521749/94‑1 (MQ=60)
TACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCT < SRR4302535.4193812/94‑1 (MQ=60)
TACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCT < SRR4302535.1641664/94‑1 (MQ=60)
ACTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTG > SRR4302535.3829653/1‑94 (MQ=60)
CTCACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGC > SRR4302535.4161815/1‑94 (MQ=60)
CACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCA > SRR4302535.1326635/1‑94 (MQ=60)
CACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCA > SRR4302535.3790358/1‑94 (MQ=60)
CACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCA > SRR4302535.1185638/1‑94 (MQ=60)
CCTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCAC < SRR4302535.3761298/94‑1 (MQ=60)
ACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCAC > SRR4302535.2812121/1‑94 (MQ=60)
ACTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCAC > SRR4302535.4065876/1‑94 (MQ=60)
CTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACA > SRR4302535.4294341/1‑94 (MQ=60)
CTCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACATATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACA > SRR4302535.3276334/1‑94 (MQ=60)
TCGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAA > SRR4302535.1396632/1‑94 (MQ=60)
CGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAAT < SRR4302535.2677603/94‑1 (MQ=60)
CGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAAT < SRR4302535.1736457/94‑1 (MQ=60)
CGCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAAT > SRR4302535.2259348/1‑94 (MQ=60)
GCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGCCGTCAGAAGCCGGTCTTTTTCCTGCCACAATG < SRR4302535.731790/94‑1 (MQ=60)
GCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATG > SRR4302535.1720730/1‑94 (MQ=60)
GCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATG < SRR4302535.4712050/94‑1 (MQ=60)
GCCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATG > SRR4302535.2006167/1‑94 (MQ=60)
CCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGA > SRR4302535.1990569/1‑94 (MQ=60)
CCTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGA > SRR4302535.253344/1‑94 (MQ=60)
CTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAG < SRR4302535.2744546/94‑1 (MQ=60)
CTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAG < SRR4302535.1069643/94‑1 (MQ=60)
CTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAG > SRR4302535.898729/1‑94 (MQ=60)
CTCTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAG < SRR4302535.1090167/94‑1 (MQ=60)
CTCTGCGCATGCAGGGGCGAGTAAAACTTCATTATGCTGACGCTGTGATGACATGAGAGAGGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAG < SRR4302535.374686/94‑1 (MQ=60)
CTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTT < SRR4302535.3724454/94‑1 (MQ=60)
CTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTT > SRR4302535.2967794/1‑94 (MQ=60)
CTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTT > SRR4302535.179618/1‑94 (MQ=60)
CTGCTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTT > SRR4302535.223363/1‑94 (MQ=60)
CTCATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAG > SRR4302535.3877366/1‑94 (MQ=60)
CTCATTCAGGGGCGAGTAAAACTTACTTATCCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAG < SRR4302535.2734041/94‑1 (MQ=60)
CATTCGGGGGCGAGTAAAACTTACTTATTCTGACGTTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCC < SRR4302535.1043736/94‑1 (MQ=60)
ATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCA < SRR4302535.3923516/94‑1 (MQ=60)
ATTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCA > SRR4302535.510694/1‑94 (MQ=60)
TTCAGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCAT < SRR4302535.1657717/94‑1 (MQ=60)
TCAGGGGCGAGTAAAACTTACTTATTCTGCCGGTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATT < SRR4302535.1414751/94‑1 (MQ=60)
TCAGGGGCGAGAAAAACTTACTTATTCTGACGCTGTGATGCCATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATT < SRR4302535.3748176/94‑1 (MQ=60)
AGGGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGC > SRR4302535.2626208/1‑94 (MQ=60)
GGGGCAAGTAAAACTTACTTATTCTGACGCTGTGATGCCATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCT < SRR4302535.4423912/94‑1 (MQ=60)
|
GTTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAAAATACTCACTCGCCTCTGCTCATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCT > NC_000913/4043144‑4043329
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
