Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,061,961 |
Δ1 bp |
coding (1386/1458 nt) |
b3876 ← |
putative permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,061,959 | 0 | C | . | 100.0%
| 1192.4
/ NA
| 260 | coding (1388/1458 nt) | b3876 | putative permease |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (146/114); total (146/114) |
Only 100 of 276 total aligned reads displayed.
TTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTA > NC_000913/4061867‑4062047
|
tttttCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGc > 1:2073003/1‑93 (MQ=255)
tttttCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGc > 1:1981634/1‑93 (MQ=255)
tttCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGccg > 2:224145/1‑92 (MQ=255)
tttCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGccg < 2:2278293/93‑2 (MQ=255)
ataataAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGtttt > 1:1679956/1‑93 (MQ=255)
taataaGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGttttt < 1:3296921/93‑1 (MQ=255)
aataaGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCCATTGACATTTATAACGTTACGGAAG‑CCGtttttt > 1:2000090/1‑93 (MQ=255)
ataaGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTttc > 1:615668/1‑93 (MQ=255)
aGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTttcttt > 2:437653/1‑92 (MQ=255)
aGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTttcttc < 1:3173492/93‑1 (MQ=255)
aGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTttcttc < 1:3507538/93‑1 (MQ=255)
aGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTttcttc > 2:885377/1‑93 (MQ=255)
aGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTttcttc < 1:2460425/93‑1 (MQ=255)
gTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTtcttct < 2:1600046/93‑1 (MQ=255)
gTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTtcttct > 1:2316064/1‑93 (MQ=255)
gTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTtcttct > 1:3137118/1‑93 (MQ=255)
gTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTtcttct > 1:2647998/1‑93 (MQ=255)
tCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTg > 2:768814/1‑93 (MQ=255)
tCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTg > 2:4260255/1‑93 (MQ=255)
tCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGGTTTTtcttctt > 1:2480903/1‑92 (MQ=255)
ccATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGt < 2:1845983/93‑1 (MQ=255)
ttttttAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGc > 2:3269865/1‑93 (MQ=255)
ttttAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCa > 1:426980/1‑93 (MQ=255)
tttAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCAt < 1:298983/93‑1 (MQ=255)
ttAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCAtc > 1:2399013/1‑93 (MQ=255)
ttAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGATTTTTCTTCTGTCGCCAtc < 2:4559486/93‑1 (MQ=255)
tAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCAtct < 2:479404/93‑1 (MQ=255)
aaaCGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCAtctc < 1:922095/93‑1 (MQ=255)
aaaCGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCAtctc < 1:1854245/93‑1 (MQ=255)
aaaCGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCAtctc < 1:1286057/93‑1 (MQ=255)
aaaCGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCAtctc < 1:3695758/93‑1 (MQ=255)
aaCGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATctct > 2:3226413/1‑93 (MQ=255)
cGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCttt < 1:2250650/93‑1 (MQ=255)
gTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTa < 2:2405150/93‑1 (MQ=255)
tAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCCTCTCTTTAt > 2:2014605/1‑93 (MQ=255)
aGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAtt > 2:734733/1‑93 (MQ=255)
aGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAtt < 1:2574120/93‑1 (MQ=255)
gggAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttt < 2:2136149/93‑1 (MQ=255)
gggAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttt > 1:549625/1‑93 (MQ=255)
gggAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttt > 2:4027059/1‑93 (MQ=255)
gggAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttt > 1:4552999/1‑93 (MQ=255)
gAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttttt < 2:1546656/93‑1 (MQ=255)
ggCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGc > 1:2879923/1‑93 (MQ=255)
cgccACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgtt > 2:4529692/1‑93 (MQ=255)
cgccACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgtt < 2:2481135/93‑1 (MQ=255)
gccACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttg > 2:1626436/1‑93 (MQ=255)
gccACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttg > 1:3840263/1‑93 (MQ=255)
gccACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttg > 2:1074206/1‑93 (MQ=255)
cacccaccAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttggt < 2:2683124/93‑1 (MQ=255)
cacccaccAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttggt < 1:314411/93‑1 (MQ=255)
cacccaccAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttggt < 2:2847317/93‑1 (MQ=255)
acccaccAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttggtt < 1:3870805/93‑1 (MQ=255)
acccaccAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttggtt > 1:2157828/1‑93 (MQ=255)
cccaccAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttggttg < 2:3373435/93‑1 (MQ=255)
aGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTcc > 2:3499802/1‑93 (MQ=255)
ggATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCt > 2:4456690/1‑93 (MQ=255)
ggATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCt > 2:633431/1‑93 (MQ=255)
gATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTc < 2:3576169/93‑1 (MQ=255)
gATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTc > 1:4601222/1‑93 (MQ=255)
tGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaa < 2:926238/93‑1 (MQ=255)
gAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaata > 1:4121741/1‑93 (MQ=255)
aaaTAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaataa > 1:3950360/1‑93 (MQ=255)
aaTAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaataat < 2:3688403/93‑1 (MQ=255)
aGCGGGTATTTACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCaa < 2:1956251/93‑1 (MQ=255)
aGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCaa < 1:1906689/93‑1 (MQ=255)
ggCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGc > 1:4440331/1‑93 (MQ=255)
aTTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAAc < 2:2834663/93‑1 (MQ=255)
aTTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAAc > 2:1200367/1‑93 (MQ=255)
ttGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAAcc < 1:1617960/93‑1 (MQ=255)
ttGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAAcc > 2:1738873/1‑93 (MQ=255)
ttGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAAcc < 1:450057/93‑1 (MQ=255)
ttGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAAcc > 2:4108919/1‑93 (MQ=255)
tGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCg > 1:2848859/1‑93 (MQ=255)
gACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGt > 1:37271/1‑93 (MQ=255)
aCATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGtt > 2:3614311/1‑93 (MQ=255)
cATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGttt > 1:1217929/1‑93 (MQ=255)
aTTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGtttt > 2:2379160/1‑93 (MQ=255)
aTTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGtttt < 1:1536299/93‑1 (MQ=255)
aTTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGtttt > 2:1381913/1‑93 (MQ=255)
aTTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGtttt < 2:1002959/93‑1 (MQ=255)
aTTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGtttt > 2:3927246/1‑93 (MQ=255)
aTTTATAACGTGACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGtttt < 2:2953047/93‑1 (MQ=255)
tttATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGttttt > 2:2115300/1‑93 (MQ=255)
tttATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGttttt > 1:4526665/1‑93 (MQ=255)
tttATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGttttt < 2:1902080/93‑1 (MQ=255)
tttATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGttttt > 2:1474413/1‑93 (MQ=255)
tttATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGgtttt > 1:4235741/1‑93 (MQ=255)
ttATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTc < 2:3046954/93‑1 (MQ=255)
ttATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTc < 1:364424/93‑1 (MQ=255)
taACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCAtt < 2:811136/93‑1 (MQ=255)
taACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCAtt < 2:1874104/93‑1 (MQ=255)
taACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCAtt < 1:2496593/93‑1 (MQ=255)
aaCGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTg < 1:1011743/93‑1 (MQ=255)
aCGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGa < 1:1094770/93‑1 (MQ=255)
aCGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGa < 2:4180379/93‑1 (MQ=255)
cGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAg < 2:4161269/93‑1 (MQ=255)
gTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAgt < 2:3764769/93‑1 (MQ=255)
ttACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGATTTTCATTGAgtg > 1:684131/1‑93 (MQ=255)
tACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAgtgt > 1:2750638/1‑93 (MQ=255)
tACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAgtgt < 2:4288416/93‑1 (MQ=255)
|
TTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTA > NC_000913/4061867‑4062047
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAGAAT > NC_000913/4061872‑4062054
|
CATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT > SRR4302535.1692119/1‑94 (MQ=60)
CATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT > SRR4302535.1668937/1‑94 (MQ=60)
CATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT > SRR4302535.3597066/1‑94 (MQ=60)
CATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT < SRR4302535.4621215/94‑1 (MQ=60)
ATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑T > SRR4302535.1228507/1‑94 (MQ=60)
TAATAAGTCCATTTTTTTAACGTAGGGGGGCCGCCACCCACCAGGATGGAAATAGGGGCTATTGACCTTTATAACGTTACGGAAG‑CCGTTTT‑‑TT > SRR4302535.976418/1‑94 (MQ=60)
TAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TT < SRR4302535.2171517/94‑1 (MQ=60)
TAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TT > SRR4302535.2741082/1‑94 (MQ=60)
TAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TT > SRR4302535.2894014/1‑94 (MQ=60)
TAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TT > SRR4302535.893998/1‑94 (MQ=60)
TAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TT < SRR4302535.3319841/94‑1 (MQ=60)
TAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCCATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TT > SRR4302535.2014503/1‑94 (MQ=60)
AATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTC > SRR4302535.619950/1‑94 (MQ=60)
ATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCT < SRR4302535.2501796/94‑1 (MQ=60)
TAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTT < SRR4302535.1706287/94‑1 (MQ=60)
TAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTT > SRR4302535.1899607/1‑94 (MQ=60)
AGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGCAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCT > SRR4302535.2468150/1‑94 (MQ=60)
AGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCT > SRR4302535.2666966/1‑94 (MQ=60)
AGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCT > SRR4302535.4687413/1‑94 (MQ=60)
AGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCT > SRR4302535.2332635/1‑94 (MQ=60)
AGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCT < SRR4302535.2478162/94‑1 (MQ=60)
AGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCT < SRR4302535.2555729/94‑1 (MQ=60)
AGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCT < SRR4302535.3531915/94‑1 (MQ=60)
AGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCT > SRR4302535.3158950/1‑94 (MQ=60)
AGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCT < SRR4302535.3195458/94‑1 (MQ=60)
GTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCGGTTTTTCTTCTT > SRR4302535.2498791/1‑94 (MQ=60)
TCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGT < SRR4302535.3719272/94‑1 (MQ=60)
CCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTC > SRR4302535.3309481/1‑94 (MQ=60)
CATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCG > SRR4302535.1066746/1‑94 (MQ=60)
TTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCC > SRR4302535.3846853/1‑94 (MQ=60)
TTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCA > SRR4302535.1993435/1‑94 (MQ=60)
TTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCA > SRR4302535.429952/1‑94 (MQ=60)
TTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCA < SRR4302535.3165008/94‑1 (MQ=60)
TTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCAT > SRR4302535.2957473/1‑94 (MQ=60)
TTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCAT > SRR4302535.1624632/1‑94 (MQ=60)
TTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATC < SRR4302535.301066/94‑1 (MQ=60)
TTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATC > SRR4302535.2416262/1‑94 (MQ=60)
TTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCT > SRR4302535.2866132/1‑94 (MQ=60)
TTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCT < SRR4302535.2039770/94‑1 (MQ=60)
TTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCT > SRR4302535.3767632/1‑94 (MQ=60)
AAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCT > SRR4302535.2253381/1‑94 (MQ=60)
AAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCT < SRR4302535.928631/94‑1 (MQ=60)
AAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCT < SRR4302535.3721337/94‑1 (MQ=60)
AAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCT > SRR4302535.3724198/1‑94 (MQ=60)
AAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCT < SRR4302535.1867602/94‑1 (MQ=60)
AAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCT < SRR4302535.2010918/94‑1 (MQ=60)
AAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCT < SRR4302535.1295224/94‑1 (MQ=60)
AACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTT > SRR4302535.1668193/1‑94 (MQ=60)
AACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTT < SRR4302535.2488565/94‑1 (MQ=60)
ACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTT > SRR4302535.2139336/1‑94 (MQ=60)
CGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTA < SRR4302535.2266677/94‑1 (MQ=60)
CGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTA < SRR4302535.497125/94‑1 (MQ=60)
CGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTA > SRR4302535.373505/1‑94 (MQ=60)
TAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATT > SRR4302535.4258928/1‑94 (MQ=60)
TAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATT < SRR4302535.3166455/94‑1 (MQ=60)
TAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATT > SRR4302535.1898596/1‑94 (MQ=60)
AGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTT < SRR4302535.2592621/94‑1 (MQ=60)
AGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTT > SRR4302535.4584109/1‑94 (MQ=60)
AGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTT > SRR4302535.553469/1‑94 (MQ=60)
AGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTT < SRR4302535.1335389/94‑1 (MQ=60)
AGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTT > SRR4302535.566670/1‑94 (MQ=60)
AGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTT > SRR4302535.1162505/1‑94 (MQ=60)
GAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTG < SRR4302535.2390589/94‑1 (MQ=60)
AGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGC > SRR4302535.2900313/1‑94 (MQ=60)
GGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCG < SRR4302535.4476269/94‑1 (MQ=60)
GCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGT < SRR4302535.1814308/94‑1 (MQ=60)
CGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTG < SRR4302535.4111078/94‑1 (MQ=60)
CGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTG > SRR4302535.3866727/1‑94 (MQ=60)
GCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGG > SRR4302535.3478557/1‑94 (MQ=60)
CCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGT > SRR4302535.3055804/1‑94 (MQ=60)
CACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTT < SRR4302535.316585/94‑1 (MQ=60)
CACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTT > SRR4302535.2173336/1‑94 (MQ=60)
ACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTG < SRR4302535.3897406/94‑1 (MQ=60)
CCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGA < SRR4302535.4583935/94‑1 (MQ=60)
ACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTT > SRR4302535.605616/1‑94 (MQ=60)
CAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCC < SRR4302535.2501921/94‑1 (MQ=60)
GGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTC > SRR4302535.4632513/1‑94 (MQ=60)
GATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCA < SRR4302535.454721/94‑1 (MQ=60)
ATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAA > SRR4302535.1266460/1‑94 (MQ=60)
ATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAA > SRR4302535.3669881/1‑94 (MQ=60)
TGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAAT > SRR4302535.2006651/1‑94 (MQ=60)
TGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAAT < SRR4302535.2838137/94‑1 (MQ=60)
GGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATA > SRR4302535.4149946/1‑94 (MQ=60)
GAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAA > SRR4302535.4173645/1‑94 (MQ=60)
GAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAA > SRR4302535.3977331/1‑94 (MQ=60)
AAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAAT > SRR4302535.4594448/1‑94 (MQ=60)
AAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAAT > SRR4302535.4551454/1‑94 (MQ=60)
AATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATC < SRR4302535.2656841/94‑1 (MQ=60)
ATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCA > SRR4302535.3879684/1‑94 (MQ=60)
ATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCA > SRR4302535.4281812/1‑94 (MQ=60)
ATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCA > SRR4302535.3259450/1‑94 (MQ=60)
AGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAAT > SRR4302535.4495622/1‑94 (MQ=60)
AGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAAT < SRR4302535.1920413/94‑1 (MQ=60)
AGCGGCTATTGACAGTTATAACGTTAC‑GAAATCCGTTTT‑‑TTCTTCTGGCGCCATCTCTTTATTTTTTCGTTGGTTGATTTCCTCAATAATCAAT < SRR4302535.3022390/94‑1 (MQ=60)
GCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATG < SRR4302535.749071/94‑1 (MQ=60)
CGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGC > SRR4302535.4470768/1‑94 (MQ=60)
CGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGC > SRR4302535.2308438/1‑94 (MQ=60)
CGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCCGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGC > SRR4302535.2881554/1‑94 (MQ=60)
GCTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAA > SRR4302535.4453986/1‑94 (MQ=60)
CTATTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAA > SRR4302535.3171813/1‑94 (MQ=60)
TTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCG < SRR4302535.133354/94‑1 (MQ=60)
TTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCG < SRR4302535.453210/94‑1 (MQ=60)
TTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCG < SRR4302535.1629613/94‑1 (MQ=60)
TTGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCG > SRR4302535.2869047/1‑94 (MQ=60)
TGACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGT > SRR4302535.37558/1‑94 (MQ=60)
GACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTT > SRR4302535.4037956/1‑94 (MQ=60)
GACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTT > SRR4302535.2524007/1‑94 (MQ=60)
ACATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTT > SRR4302535.1226667/1‑94 (MQ=60)
ATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTT > SRR4302535.4557672/1‑94 (MQ=60)
ATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTT < SRR4302535.1547366/94‑1 (MQ=60)
ATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTT < SRR4302535.3396941/94‑1 (MQ=60)
ATTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGGTTTT > SRR4302535.4264730/1‑94 (MQ=60)
TTTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTC > SRR4302535.2610529/1‑94 (MQ=60)
TTATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCA < SRR4302535.366932/94‑1 (MQ=60)
TATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCAT > SRR4302535.638986/1‑94 (MQ=60)
ATAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATT > SRR4302535.1002659/1‑94 (MQ=60)
TAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTG < SRR4302535.2514604/94‑1 (MQ=60)
TAACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTG < SRR4302535.2087697/94‑1 (MQ=60)
AACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCCTCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGG > SRR4302535.4380078/1‑94 (MQ=60)
AACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGA < SRR4302535.1018932/94‑1 (MQ=60)
ACGTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAG < SRR4302535.1102562/94‑1 (MQ=60)
GTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTG > SRR4302535.3940732/1‑94 (MQ=60)
GTTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGATTTTCATTGAGTG > SRR4302535.688919/1‑94 (MQ=60)
TTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGT > SRR4302535.2770246/1‑94 (MQ=60)
TTACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGT > SRR4302535.2326393/1‑94 (MQ=60)
TACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTG < SRR4302535.1187354/94‑1 (MQ=60)
TACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTG < SRR4302535.243507/94‑1 (MQ=60)
TACGGAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTG < SRR4302535.3950119/94‑1 (MQ=60)
GAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAA > SRR4302535.2539917/1‑94 (MQ=60)
GAAG‑CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAA > SRR4302535.1853752/1‑94 (MQ=60)
agCCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAG > SRR4302535.1860729/3‑94 (MQ=60)
agCCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAG > SRR4302535.146031/3‑94 (MQ=60)
GCCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTATAAGA > SRR4302535.833828/1‑94 (MQ=60)
GCCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAGA < SRR4302535.3338417/94‑1 (MQ=60)
CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAGAA > SRR4302535.2854416/1‑94 (MQ=60)
CCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAGAA < SRR4302535.841715/94‑1 (MQ=60)
CGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAGAAT > SRR4302535.2335111/1‑94 (MQ=60)
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CATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCCGTTTT‑‑TTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAGAAT > NC_000913/4061872‑4062054
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
