Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,211,571 |
A→G |
R44R (CGT→CGC) |
yjaB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,211,571 | 0 | A | G | 100.0%
| 667.7
/ NA
| 212 | R44R (CGT→CGC) | yjaB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (106/106); total (106/106) |
Only 100 of 253 total aligned reads displayed.
ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC > NC_000913/4211481‑4211660
|
aTCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcg > 2:2144584/1‑93 (MQ=255)
aTCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcg > 2:2834593/1‑93 (MQ=255)
tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga > 1:172791/1‑93 (MQ=255)
tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga > 1:3652630/1‑93 (MQ=255)
ccATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaa < 2:693858/93‑1 (MQ=255)
ccATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaa < 2:3693012/93‑1 (MQ=255)
cATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaac < 2:1322600/93‑1 (MQ=255)
atGCTTCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAg < 2:760181/93‑1 (MQ=255)
tgctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAgg > 1:4100257/1‑93 (MQ=255)
gctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGt > 2:2757269/1‑93 (MQ=255)
tgcCCACTTAGCAACATAAATCCACCCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcc < 2:4540309/93‑1 (MQ=255)
tgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcc > 1:3773280/1‑93 (MQ=255)
tgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcc < 2:1251229/93‑1 (MQ=255)
cccACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcctc > 2:2700846/1‑93 (MQ=255)
ccACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcctcc < 1:27045/93‑1 (MQ=255)
cACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCa > 1:4232339/1‑93 (MQ=255)
cACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCa < 1:4165228/93‑1 (MQ=255)
cACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCa < 1:1041453/93‑1 (MQ=255)
cACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGCCCTCCa > 1:480357/1‑93 (MQ=255)
cTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGc > 2:3549335/1‑93 (MQ=255)
cTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGc > 2:3787960/1‑93 (MQ=255)
ttAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCt > 2:2516123/1‑93 (MQ=255)
gCAACATAAATCAAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCgg < 1:797995/93‑1 (MQ=255)
cAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCggg > 2:3057819/1‑92 (MQ=255)
cAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGt < 2:4309315/93‑1 (MQ=255)
aCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTcc < 1:3328693/93‑1 (MQ=255)
aCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTcc > 1:1161104/1‑93 (MQ=255)
aCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTcc > 2:4006011/1‑93 (MQ=255)
cATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCg > 2:3587370/1‑93 (MQ=255)
cATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCg > 2:1785101/1‑93 (MQ=255)
tAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAt > 2:2956195/1‑93 (MQ=255)
aaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAc < 2:2667681/93‑1 (MQ=255)
aTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAct > 1:3586934/1‑93 (MQ=255)
tCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATActc < 1:1973109/93‑1 (MQ=255)
tCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATActc < 2:2577200/93‑1 (MQ=255)
ccAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATActct < 2:3855570/93‑1 (MQ=255)
cAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctg > 1:1436079/1‑93 (MQ=255)
cAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctg > 1:3539356/1‑93 (MQ=255)
aaCCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctgc < 2:4426787/93‑1 (MQ=255)
ccGGCTGATCCCGCTCATTAACCGCGACCCACAGCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctgctg < 1:1083213/93‑1 (MQ=255)
gCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATa < 1:3437291/93‑1 (MQ=255)
tGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTTATAGa > 1:948739/1‑93 (MQ=255)
tGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGa < 2:3124333/93‑1 (MQ=255)
tGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGa > 2:1849371/1‑93 (MQ=255)
tGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGa < 1:1199918/93‑1 (MQ=255)
aTCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTGGGTCCGATACTCTGGTGATAGaga > 2:1161582/1‑91 (MQ=255)
tCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaaaa < 2:4240871/93‑1 (MQ=255)
acccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaaaa < 1:1364490/92‑1 (MQ=255)
cccGCTCATTACCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAt < 2:1030612/93‑1 (MQ=255)
cccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAt > 2:135454/1‑93 (MQ=255)
ccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATc > 2:3840880/1‑93 (MQ=255)
cGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCg < 2:3337586/93‑1 (MQ=255)
cATTACCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAg < 2:1053916/93‑1 (MQ=255)
cATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAg < 1:3309934/93‑1 (MQ=255)
aTTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGt > 2:4678232/1‑93 (MQ=255)
ttAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTg < 2:4053801/93‑1 (MQ=255)
aCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCa > 1:2957294/1‑93 (MQ=255)
ccGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAt > 2:1444316/1‑93 (MQ=255)
ccGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAt < 1:1522595/93‑1 (MQ=255)
ccGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAt < 2:4112279/93‑1 (MQ=255)
cgcgACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATc > 1:4177225/1‑93 (MQ=255)
cccACAACGGCGCTTCCGGCAGCAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAg > 2:3169808/1‑93 (MQ=255)
cacaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGaa < 2:3243758/93‑1 (MQ=255)
cacaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGaa < 2:517772/93‑1 (MQ=255)
cacaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGaa > 1:464776/1‑93 (MQ=255)
ccaACGGCGCTTCGGGCAGGAAGGAGCGAACTAGGTCCTCGAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGTCATCGACAGAAc < 2:1730351/92‑1 (MQ=255)
ccaACGGCGCTTCCGACAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAc < 1:1738365/92‑1 (MQ=255)
acaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAc > 1:2138766/1‑93 (MQ=255)
acaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAc < 1:2333083/93‑1 (MQ=255)
caACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACg > 2:4069597/1‑93 (MQ=255)
aCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGac > 1:2244110/1‑93 (MQ=255)
gcgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAcc > 2:2820411/1‑93 (MQ=255)
gcgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAcc > 1:2013120/1‑93 (MQ=255)
cTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCaaa > 2:894998/1‑93 (MQ=255)
cTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCaaa > 2:2038740/1‑93 (MQ=255)
ttCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGCACGACACCAAAt > 1:4133699/1‑93 (MQ=255)
ttCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAt > 2:420111/1‑93 (MQ=255)
ttCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAt > 1:2385043/1‑93 (MQ=255)
ttCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAt < 1:866796/93‑1 (MQ=255)
tCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATc < 2:3765064/93‑1 (MQ=255)
cGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGc < 1:1865787/93‑1 (MQ=255)
cGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGc < 1:614556/93‑1 (MQ=255)
cGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGc > 1:4582043/1‑93 (MQ=255)
ggCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCa > 1:3133267/1‑93 (MQ=255)
gCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCaa < 2:2357846/93‑1 (MQ=255)
cAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAAc < 1:2790881/93‑1 (MQ=255)
cAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAAc < 2:2426818/93‑1 (MQ=255)
aggaaggaGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACg > 2:3715919/1‑93 (MQ=255)
aggaaggaGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACg > 2:2026734/1‑93 (MQ=255)
ggaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGa > 1:4665210/1‑93 (MQ=255)
ggaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGa > 2:661244/1‑93 (MQ=255)
gaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAg < 1:3885817/93‑1 (MQ=255)
gaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAg > 2:74774/1‑93 (MQ=255)
gaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAg < 1:3187684/93‑1 (MQ=255)
aaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGt < 2:2101631/93‑1 (MQ=255)
aaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGt < 2:1877602/93‑1 (MQ=255)
aaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGt < 1:3562418/93‑1 (MQ=255)
aggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGtt > 1:4480423/1‑93 (MQ=255)
aggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGtt > 2:1102671/1‑93 (MQ=255)
ggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTtc < 1:3960628/93‑1 (MQ=255)
|
ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC > NC_000913/4211481‑4211660
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTCC > NC_000913/4211479‑4211664
|
GCATCCATATGCTGCGCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC < SRR4302535.2318811/94‑1 (MQ=60)
GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC < SRR4302535.3496147/94‑1 (MQ=60)
GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC > SRR4302535.2679150/1‑94 (MQ=60)
CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG < SRR4302535.4422401/94‑1 (MQ=60)
CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG > SRR4302535.3771196/1‑94 (MQ=60)
CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG < SRR4302535.4098902/94‑1 (MQ=60)
ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA > SRR4302535.173987/1‑94 (MQ=60)
ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA > SRR4302535.4708936/1‑94 (MQ=60)
ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA > SRR4302535.3677922/1‑94 (MQ=60)
CATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACA > SRR4302535.3655265/1‑94 (MQ=60)
TATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAG < SRR4302535.2745412/94‑1 (MQ=60)
ATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGG > SRR4302535.4128330/1‑94 (MQ=60)
ATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGG < SRR4302535.2056725/94‑1 (MQ=60)
GCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTC > SRR4302535.4658391/1‑94 (MQ=60)
CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC < SRR4302535.1838210/94‑1 (MQ=60)
CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC > SRR4302535.3799306/1‑94 (MQ=60)
CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC < SRR4302535.2285089/94‑1 (MQ=60)
TCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTACCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTC < SRR4302535.420401/94‑1 (MQ=60)
CCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCC < SRR4302535.853265/94‑1 (MQ=60)
CCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCC > SRR4302535.933951/1‑94 (MQ=60)
CCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCC > SRR4302535.1133041/1‑94 (MQ=60)
CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA > SRR4302535.4261304/1‑94 (MQ=60)
CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA < SRR4302535.27257/94‑1 (MQ=60)
CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGCCCTCCA > SRR4302535.483725/1‑94 (MQ=60)
CACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAG < SRR4302535.1048838/94‑1 (MQ=60)
CACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAG < SRR4302535.4193749/94‑1 (MQ=60)
CACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAG < SRR4302535.2000523/94‑1 (MQ=60)
GCAACATAAATCAAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGT < SRR4302535.803596/94‑1 (MQ=60)
CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGCAGGAGCGAACTAGGTCCTCCAGCTCGGTC > SRR4302535.2997691/1‑94 (MQ=60)
AACATAAATCCAACCGGCTGATTCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC > SRR4302535.2457746/1‑94 (MQ=60)
AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC > SRR4302535.1169404/1‑94 (MQ=60)
AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC < SRR4302535.642538/94‑1 (MQ=60)
AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC > SRR4302535.3556048/1‑94 (MQ=60)
ACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCG < SRR4302535.3351850/94‑1 (MQ=60)
ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT > SRR4302535.3581377/1‑94 (MQ=60)
AATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACT > SRR4302535.3611813/1‑94 (MQ=60)
ATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTC > SRR4302535.4711537/1‑94 (MQ=60)
ATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTC > SRR4302535.4206366/1‑94 (MQ=60)
TCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCT < SRR4302535.2196992/94‑1 (MQ=60)
TCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCT < SRR4302535.2049336/94‑1 (MQ=60)
TCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCT < SRR4302535.1987319/94‑1 (MQ=60)
CCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTG > SRR4302535.3563928/1‑94 (MQ=60)
CCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTG > SRR4302535.1446341/1‑94 (MQ=60)
CAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGC > SRR4302535.4026297/1‑94 (MQ=60)
AACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCT > SRR4302535.4410657/1‑94 (MQ=60)
AACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCT > SRR4302535.408071/1‑94 (MQ=60)
ACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTG < SRR4302535.1114786/94‑1 (MQ=60)
CCGGCTGATCCCGCTCATTAACCGCGACCCACAGCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGA < SRR4302535.1090914/94‑1 (MQ=60)
CCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGA > SRR4302535.4190163/1‑94 (MQ=60)
CGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAT < SRR4302535.389970/94‑1 (MQ=60)
CGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAT > SRR4302535.3309033/1‑94 (MQ=60)
GGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATA < SRR4302535.3013970/94‑1 (MQ=60)
GGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATA > SRR4302535.3363281/1‑94 (MQ=60)
GCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAG < SRR4302535.3461201/94‑1 (MQ=60)
GCTGACCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAG < SRR4302535.3429066/94‑1 (MQ=60)
CTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTTATAGA > SRR4302535.955460/1‑94 (MQ=60)
CTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGA < SRR4302535.366721/94‑1 (MQ=60)
TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA < SRR4302535.1208516/94‑1 (MQ=60)
TCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT < SRR4302535.1747544/94‑1 (MQ=60)
ACCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT < SRR4302535.1374248/94‑1 (MQ=60)
CCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC < SRR4302535.2382139/94‑1 (MQ=60)
CCGCTCATTACCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCG < SRR4302535.4176919/94‑1 (MQ=60)
CCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCG < SRR4302535.92058/94‑1 (MQ=60)
cctcactagCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCAAACTAGGTCCCCCACCTCGTTCCGATACTCTGCTGATAGAAAATCGTG < SRR4302535.4647864/85‑1 (MQ=60)
CTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATCCTCTGCTGATAGAAAATCGTGA < SRR4302535.4680047/94‑1 (MQ=60)
TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGCAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG < SRR4302535.1928901/94‑1 (MQ=60)
CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT < SRR4302535.3332965/94‑1 (MQ=60)
TTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGG < SRR4302535.694525/94‑1 (MQ=60)
TAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGC < SRR4302535.325797/94‑1 (MQ=60)
TAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGC < SRR4302535.4443329/94‑1 (MQ=60)
AACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCA > SRR4302535.2978062/1‑94 (MQ=60)
ACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAT < SRR4302535.145170/94‑1 (MQ=60)
ACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAT < SRR4302535.3509317/94‑1 (MQ=60)
ACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAT < SRR4302535.4200662/94‑1 (MQ=60)
CCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATC < SRR4302535.561696/94‑1 (MQ=60)
CCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATC < SRR4302535.1533559/94‑1 (MQ=60)
CCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATC > SRR4302535.4205821/1‑94 (MQ=60)
GCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGA < SRR4302535.120467/94‑1 (MQ=60)
CGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGAC < SRR4302535.3856025/94‑1 (MQ=60)
GACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACA < SRR4302535.3588912/94‑1 (MQ=60)
ACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAG > SRR4302535.1214590/1‑94 (MQ=60)
ACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAG > SRR4302535.4607871/1‑94 (MQ=60)
ACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAG > SRR4302535.358136/1‑94 (MQ=60)
CCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAA > SRR4302535.1065554/1‑94 (MQ=60)
CCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAA > SRR4302535.468025/1‑94 (MQ=60)
CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC > SRR4302535.3205854/1‑94 (MQ=60)
CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC > SRR4302535.2154168/1‑94 (MQ=60)
CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC < SRR4302535.1713350/94‑1 (MQ=60)
CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC > SRR4302535.398569/1‑94 (MQ=60)
CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC < SRR4302535.2809846/94‑1 (MQ=60)
CCAACGGCGCTTCCGACAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACG < SRR4302535.1750930/94‑1 (MQ=60)
ACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACG < SRR4302535.2349777/94‑1 (MQ=60)
ACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACG < SRR4302535.151246/94‑1 (MQ=60)
ACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACG > SRR4302535.230930/1‑94 (MQ=60)
ACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACG > SRR4302535.3335522/1‑94 (MQ=60)
AACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGAC > SRR4302535.2260066/1‑94 (MQ=60)
GGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACC > SRR4302535.2027622/1‑94 (MQ=60)
CTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGCACGACACCAAAT > SRR4302535.4161995/1‑94 (MQ=60)
CTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAT > SRR4302535.2402177/1‑94 (MQ=60)
TTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATC < SRR4302535.872927/94‑1 (MQ=60)
TTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATC < SRR4302535.1984535/94‑1 (MQ=60)
TCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCG < SRR4302535.1743699/94‑1 (MQ=60)
CCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGC > SRR4302535.4613247/1‑94 (MQ=60)
CGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCA < SRR4302535.618830/94‑1 (MQ=60)
CGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCA > SRR4302535.3155083/1‑94 (MQ=60)
CGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCA < SRR4302535.1879234/94‑1 (MQ=60)
GGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAA > SRR4302535.4150781/1‑94 (MQ=60)
CAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACG < SRR4302535.2810742/94‑1 (MQ=60)
AGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGA > SRR4302535.4696749/1‑94 (MQ=60)
GAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGT < SRR4302535.3209729/94‑1 (MQ=60)
GAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGT < SRR4302535.3912471/94‑1 (MQ=60)
GAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGT < SRR4302535.2825078/94‑1 (MQ=60)
AAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTT > SRR4302535.4511178/1‑94 (MQ=60)
AAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTT < SRR4302535.3587118/94‑1 (MQ=60)
AGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC < SRR4302535.2470388/94‑1 (MQ=60)
AGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC < SRR4302535.1316199/94‑1 (MQ=60)
GGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCC < SRR4302535.3987676/94‑1 (MQ=60)
GGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCC < SRR4302535.1396606/94‑1 (MQ=60)
GAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCT < SRR4302535.3901013/94‑1 (MQ=60)
GAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCT < SRR4302535.393469/94‑1 (MQ=60)
AGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTC < SRR4302535.3609251/94‑1 (MQ=60)
GCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTCC > SRR4302535.828533/1‑94 (MQ=60)
|
GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTCC > NC_000913/4211479‑4211664
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
