Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,211,571 A→G R44R (CGT→CGC yjaB ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,211,5710AG99.7% 1113.5 / ‑6.1 359R44R (CGT→CGCyjaBhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (183/175);  total (183/176)
Fisher's exact test for biased strand distribution p-value = 4.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 423 total aligned reads displayed.

ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC  >  NC_000913/4211481‑4211660
                                                                                          |                                                                                         
aTCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCTGCAGGAAGgagcg                                                                                         >  2:6096882/1‑93 (MQ=255)
aTCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcg                                                                                         >  1:2715345/1‑93 (MQ=255)
aTCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcg                                                                                         >  1:1752164/1‑93 (MQ=255)
 tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga                                                                                        >  2:6425038/1‑93 (MQ=255)
 tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga                                                                                        >  2:6720274/1‑93 (MQ=255)
 tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga                                                                                        >  2:1291996/1‑93 (MQ=255)
 tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga                                                                                        <  2:1835717/93‑1 (MQ=255)
 accATATGCTGCCTACTAAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga                                                                                        <  1:6324722/92‑1 (MQ=255)
   cATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaac                                                                                      >  1:7782791/1‑93 (MQ=255)
   cATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaac                                                                                      <  2:3326468/93‑1 (MQ=255)
   cATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaac                                                                                      <  2:901643/93‑1 (MQ=255)
   cATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCAACCCACAACGGCGCTTCCGGCAGGAAGgagcgaac                                                                                      <  1:2227055/93‑1 (MQ=255)
     tatGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTa                                                                                    >  2:4203326/1‑93 (MQ=255)
     tatGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTa                                                                                    >  1:3377990/1‑93 (MQ=255)
      atGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAg                                                                                   <  1:7292589/93‑1 (MQ=255)
       tgctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAgg                                                                                  <  2:1465682/93‑1 (MQ=255)
       tgctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAgg                                                                                  >  2:4534189/1‑93 (MQ=255)
       tgctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAgg                                                                                  <  2:489314/93‑1 (MQ=255)
       tgctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAgg                                                                                  >  2:5577617/1‑93 (MQ=255)
       tgctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAgg                                                                                  >  2:3044380/1‑93 (MQ=255)
        gctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGt                                                                                 <  2:6501893/93‑1 (MQ=255)
          tgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcc                                                                               >  1:6201195/1‑93 (MQ=255)
              cACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCa                                                                           >  1:4377740/1‑93 (MQ=255)
               aCTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAg                                                                          >  2:435118/1‑93 (MQ=255)
               aCTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAg                                                                          >  2:586955/1‑93 (MQ=255)
                cTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGc                                                                         >  1:2900129/1‑93 (MQ=255)
                cTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGc                                                                         <  2:1194265/93‑1 (MQ=255)
                 ttAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCt                                                                        >  1:3868804/1‑93 (MQ=255)
                 ttAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCt                                                                        >  1:7485376/1‑93 (MQ=255)
                 ttAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGACCTACAGCt                                                                        >  1:4686863/1‑93 (MQ=255)
                  tAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTc                                                                       <  2:7366523/93‑1 (MQ=255)
                  tAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTc                                                                       >  1:6681867/1‑93 (MQ=255)
                   aGCAAAATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGATTCCGGCAGGAAGGAGCGAACTAGGTCCTTCAGCTCg                                                                      >  2:6324230/1‑93 (MQ=255)
                     cAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGt                                                                    <  1:5370851/93‑1 (MQ=255)
                      aaCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTc                                                                   >  1:20252/1‑93 (MQ=255)
                      aaCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTc                                                                   <  1:655962/93‑1 (MQ=255)
                      aaCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTACTCCAGCTCGGTc                                                                   >  2:7208528/1‑93 (MQ=255)
                       aCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTcc                                                                  >  1:485599/1‑93 (MQ=255)
                       aCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCTCCAGCTCGGTTCg                                                                 >  2:1314657/1‑93 (MQ=255)
                          tAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAt                                                               >  1:7122914/1‑93 (MQ=255)
                            aaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAc                                                             >  1:6603828/1‑93 (MQ=255)
                            aaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAc                                                             >  1:6902803/1‑93 (MQ=255)
                                 aaCCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctgc                                                        <  1:3552927/93‑1 (MQ=255)
                                      gCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATa                                                   >  2:7581102/1‑93 (MQ=255)
                                      gCTCATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATa                                                   <  1:5228006/93‑1 (MQ=255)
                                        tGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGa                                                 >  1:1523336/1‑93 (MQ=255)
                                         gATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaa                                                >  1:3414318/1‑93 (MQ=255)
                                          aTCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaaa                                               >  1:7908755/1‑93 (MQ=255)
                                           acccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaaaa                                              <  1:6817233/92‑1 (MQ=255)
                                            cccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAt                                             >  2:5020967/1‑93 (MQ=255)
                                            cccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAt                                             <  1:6313469/93‑1 (MQ=255)
                                               gCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGt                                          >  2:5400071/1‑93 (MQ=255)
                                                 tCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGa                                        >  1:793649/1‑93 (MQ=255)
                                                 tCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGa                                        <  2:7191177/93‑1 (MQ=255)
                                                 tCATAAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGa                                        <  2:7113854/93‑1 (MQ=255)
                                                  cATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAg                                       <  1:461234/93‑1 (MQ=255)
                                                  cATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAg                                       <  2:3388924/93‑1 (MQ=255)
                                                   aTTAACCGCGACCCACAACGGCGCTTCCGGCAGTAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGt                                      <  1:5544264/93‑1 (MQ=255)
                                                    ttACCCGCGGCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTg                                     <  2:3226537/93‑1 (MQ=255)
                                                     tAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTgg                                    <  1:1404156/93‑1 (MQ=255)
                                                       aCCGCGTCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCa                                  <  1:3216098/93‑1 (MQ=255)
                                                       aCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCa                                  <  2:3798943/93‑1 (MQ=255)
                                                       aCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCa                                  <  1:976342/93‑1 (MQ=255)
                                                       aCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCa                                  >  1:4550706/1‑93 (MQ=255)
                                                       aCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCa                                  >  1:557883/1‑93 (MQ=255)
                                                         cgcgACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATc                                <  2:2005478/93‑1 (MQ=255)
                                                          gcgACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCg                               >  1:2570090/1‑93 (MQ=255)
                                                          gcgACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCg                               >  2:6021901/1‑93 (MQ=255)
                                                            gACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGAc                             <  2:7655845/93‑1 (MQ=255)
                                                             aCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACa                            <  2:7846898/93‑1 (MQ=255)
                                                             aCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACa                            >  2:2120713/1‑93 (MQ=255)
                                                             aCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACa                            >  2:158623/1‑93 (MQ=255)
                                                              cccACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAg                           <  2:258667/93‑1 (MQ=255)
                                                               ccACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGa                          >  1:3985288/1‑93 (MQ=255)
                                                                 acaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAc                        >  1:3332295/1‑93 (MQ=255)
                                                                   aaCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGa                      <  1:1584034/93‑1 (MQ=255)
                                                                   aaCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGa                      <  1:4141421/93‑1 (MQ=255)
                                                                   aaCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGa                      <  2:6243722/93‑1 (MQ=255)
                                                                    aCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGac                     >  2:3889371/1‑93 (MQ=255)
                                                                     cGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAAGacc                    >  1:6015275/1‑92 (MQ=255)
                                                                     cGGCGCGTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAGCGACAGAACGaca                    <  2:476678/93‑1 (MQ=255)
                                                                      ggCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGacac                   <  1:7566617/93‑1 (MQ=255)
                                                                       gcgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAcc                  >  2:3530384/1‑93 (MQ=255)
                                                                       gcgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAcc                  >  2:6593843/1‑93 (MQ=255)
                                                                        cgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCa                 >  2:1054935/1‑93 (MQ=255)
                                                                        cgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCa                 >  1:2808096/1‑93 (MQ=255)
                                                                          cTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCaaa               <  2:2074407/93‑1 (MQ=255)
                                                                           ttCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAt              >  1:2401725/1‑93 (MQ=255)
                                                                              cGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGc           >  1:1212395/1‑93 (MQ=255)
                                                                                gCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCaa         >  2:5117780/1‑93 (MQ=255)
                                                                                gCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCaa         <  1:640227/93‑1 (MQ=255)
                                                                                 cAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAAc        <  1:5811090/93‑1 (MQ=255)
                                                                                   ggaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATCCTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGa      <  2:4414910/93‑1 (MQ=255)
                                                                                   ggaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGa      >  2:5686131/1‑93 (MQ=255)
                                                                                   ggaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGa      <  1:1025978/93‑1 (MQ=255)
                                                                                    gaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAg     >  2:6213847/1‑93 (MQ=255)
                                                                                     aaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGt    <  1:3038366/93‑1 (MQ=255)
                                                                                     aaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGt    <  2:2761292/93‑1 (MQ=255)
                                                                                      aggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGtt   >  1:5436864/1‑93 (MQ=255)
                                                                                       ggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTtc  >  2:6936912/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC  >  NC_000913/4211481‑4211660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 226 total aligned reads displayed.
CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTC  >  NC_000913/4211478‑4211663
                                                                                             |                                                                                            
CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAG                                                                                              >  SRR4302543.65744/1‑94 (MQ=60)
CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAG                                                                                              <  SRR4302543.7578591/94‑1 (MQ=60)
 GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC                                                                                             <  SRR4302543.5968496/94‑1 (MQ=60)
 GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC                                                                                             <  SRR4302543.2194028/94‑1 (MQ=60)
 GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC                                                                                             >  SRR4302543.4824712/1‑94 (MQ=60)
  CATCCATATGCTGCCCACTTAGCAACATAACTCCAACCGGCTGATACCGATCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG                                                                                            >  SRR4302543.5417917/1‑94 (MQ=60)
  CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG                                                                                            <  SRR4302543.1998762/94‑1 (MQ=60)
  CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG                                                                                            >  SRR4302543.1767816/1‑94 (MQ=60)
  CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG                                                                                            >  SRR4302543.5417916/1‑94 (MQ=60)
  CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG                                                                                            >  SRR4302543.2740019/1‑94 (MQ=60)
   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                           >  SRR4302543.1493151/1‑94 (MQ=60)
   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                           <  SRR4302543.7889112/94‑1 (MQ=60)
   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                           >  SRR4302543.5593220/1‑94 (MQ=60)
   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                           >  SRR4302543.3266779/1‑94 (MQ=60)
    TCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAA                                                                                          >  SRR4302543.2764622/1‑94 (MQ=60)
    TCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAA                                                                                          <  SRR4302543.6157170/94‑1 (MQ=60)
    ACCATATGCTGCCTACTAAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAA                                                                                          <  SRR4302543.6384203/94‑1 (MQ=60)
     CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC                                                                                         >  SRR4302543.4524854/1‑94 (MQ=60)
     CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC                                                                                         >  SRR4302543.7856171/1‑94 (MQ=60)
     CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC                                                                                         >  SRR4302543.6365688/1‑94 (MQ=60)
      CATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACT                                                                                        <  SRR4302543.5447189/94‑1 (MQ=60)
      CATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACT                                                                                        <  SRR4302543.5447190/94‑1 (MQ=60)
      CATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACT                                                                                        >  SRR4302543.3832227/1‑94 (MQ=60)
      CATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACT                                                                                        <  SRR4302543.3209748/94‑1 (MQ=60)
      CATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACT                                                                                        >  SRR4302543.7487377/1‑94 (MQ=60)
      CATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCAACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACT                                                                                        <  SRR4302543.2247164/94‑1 (MQ=60)
       ATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTA                                                                                       >  SRR4302543.3408310/1‑94 (MQ=60)
        tatgctactcacgaAGCAACATAAATCCAACCGGCTGTTACCGCTTATTATCCGCGACCCACAGCGGCGCTTCCGGCAGGAAGGAGCGAACTAG                                                                                      <  SRR4302543.6428341/80‑1 (MQ=60)
        TATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAG                                                                                      <  SRR4302543.8002337/94‑1 (MQ=60)
        TATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAG                                                                                      <  SRR4302543.3438252/94‑1 (MQ=60)
        TATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAG                                                                                      <  SRR4302543.3438251/94‑1 (MQ=60)
         ATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGG                                                                                     >  SRR4302543.2565863/1‑94 (MQ=60)
         ATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGG                                                                                     <  SRR4302543.4181735/94‑1 (MQ=60)
         ATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGG                                                                                     <  SRR4302543.7741195/94‑1 (MQ=60)
         ATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGG                                                                                     <  SRR4302543.7362966/94‑1 (MQ=60)
          TGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGT                                                                                    <  SRR4302543.6107665/94‑1 (MQ=60)
          TGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGT                                                                                    <  SRR4302543.373060/94‑1 (MQ=60)
           GCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTC                                                                                   >  SRR4302543.4706589/1‑94 (MQ=60)
           GCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCACGCTCATTAACCGCGACCCACAACGGCGCTTACGGAAGGAAGGAGCGAACTAGATC                                                                                   >  SRR4302543.7563452/1‑94 (MQ=60)
            CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC                                                                                  >  SRR4302543.5409717/1‑94 (MQ=60)
            CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC                                                                                  >  SRR4302543.5499519/1‑94 (MQ=60)
            CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC                                                                                  >  SRR4302543.6259764/1‑94 (MQ=60)
            CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC                                                                                  <  SRR4302543.5617528/94‑1 (MQ=60)
             TGCCGACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCAGCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCT                                                                                 <  SRR4302543.2344206/94‑1 (MQ=60)
             CGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCT                                                                                 <  SRR4302543.2831167/94‑1 (MQ=60)
             CGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCT                                                                                 <  SRR4302543.2831168/94‑1 (MQ=60)
              GCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTC                                                                                <  SRR4302543.189737/94‑1 (MQ=60)
               CCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCC                                                                               <  SRR4302543.488889/94‑1 (MQ=60)
                CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA                                                                              <  SRR4302543.8004385/94‑1 (MQ=60)
                CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA                                                                              <  SRR4302543.1875064/94‑1 (MQ=60)
                CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA                                                                              >  SRR4302543.4417416/1‑94 (MQ=60)
                CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA                                                                              >  SRR4302543.7618237/1‑94 (MQ=60)
                CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA                                                                              <  SRR4302543.2563175/94‑1 (MQ=60)
                CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA                                                                              <  SRR4302543.1582674/94‑1 (MQ=60)
                CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA                                                                              >  SRR4302543.6315520/1‑94 (MQ=60)
                 CACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGGGCGAACTAGGTCCTCCAG                                                                             <  SRR4302543.901959/94‑1 (MQ=60)
                 CACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAG                                                                             >  SRR4302543.1728954/1‑94 (MQ=60)
                  ACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGC                                                                            >  SRR4302543.2926496/1‑94 (MQ=60)
                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCacgct                                                                           >  SRR4302543.3902967/1‑89 (MQ=60)
                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                           >  SRR4302543.7557008/1‑94 (MQ=60)
                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                           >  SRR4302543.4500121/1‑94 (MQ=60)
                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                           >  SRR4302543.6730795/1‑94 (MQ=60)
                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                           <  SRR4302543.2236131/94‑1 (MQ=60)
                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                           <  SRR4302543.84732/94‑1 (MQ=60)
                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                           >  SRR4302543.3902968/1‑94 (MQ=60)
                    TTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTC                                                                          <  SRR4302543.514541/94‑1 (MQ=60)
                    TTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTC                                                                          >  SRR4302543.6744946/1‑94 (MQ=60)
                      AGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGG                                                                        >  SRR4302543.7648092/1‑94 (MQ=60)
                        CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTC                                                                      >  SRR4302543.607141/1‑94 (MQ=60)
                        CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTC                                                                      <  SRR4302543.5419479/94‑1 (MQ=60)
                        CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTC                                                                      >  SRR4302543.1064948/1‑94 (MQ=60)
                        CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTC                                                                      >  SRR4302543.20440/1‑94 (MQ=60)
                        CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTC                                                                      <  SRR4302543.6378978/94‑1 (MQ=60)
                        CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAACTCGGTC                                                                      >  SRR4302543.689907/1‑94 (MQ=60)
                        CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCACTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTC                                                                      >  SRR4302543.2095005/1‑94 (MQ=60)
                         AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC                                                                     >  SRR4302543.6835484/1‑94 (MQ=60)
                         AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC                                                                     <  SRR4302543.661973/94‑1 (MQ=60)
                         AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC                                                                     <  SRR4302543.6699401/94‑1 (MQ=60)
                         AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC                                                                     >  SRR4302543.490091/1‑94 (MQ=60)
                         AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCACCTCGGTCC                                                                     >  SRR4302543.6380538/1‑94 (MQ=60)
                          ACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCG                                                                    >  SRR4302543.2400604/1‑94 (MQ=60)
                           CATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGA                                                                   >  SRR4302543.4505515/1‑94 (MQ=60)
                           CATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGA                                                                   >  SRR4302543.3531073/1‑94 (MQ=60)
                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                  >  SRR4302543.7192108/1‑94 (MQ=60)
                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                  <  SRR4302543.6909496/94‑1 (MQ=60)
                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                  >  SRR4302543.7192109/1‑94 (MQ=60)
                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                  >  SRR4302543.7233027/1‑94 (MQ=60)
                             TACATCCATCCGGCTGATCACGCTTATTAACCGCGACCATCAACGGCGCATCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATA                                                                 <  SRR4302543.3396360/94‑1 (MQ=60)
                              AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAC                                                                >  SRR4302543.6967667/1‑94 (MQ=60)
                              AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAC                                                                <  SRR4302543.4727557/94‑1 (MQ=60)
                              AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAC                                                                <  SRR4302543.5062428/94‑1 (MQ=60)
                              AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAC                                                                >  SRR4302543.6666063/1‑94 (MQ=60)
                              AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGCACTCCAGCTCGGTCCGATCC                                                                >  SRR4302543.6666064/1‑94 (MQ=60)
                               AATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACT                                                               >  SRR4302543.2718870/1‑94 (MQ=60)
                                ATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTCGGTCCTCCAGCTCGGTCCGATAttt                                                              >  SRR4302543.5625162/1‑91 (MQ=60)
                                ATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTC                                                              >  SRR4302543.6434706/1‑94 (MQ=60)
                                ATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTC                                                              >  SRR4302543.7352254/1‑94 (MQ=60)
                                 TCCAACCGGCTGATCCCGCTCATTACCCGCGCCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCT                                                             <  SRR4302543.7276613/94‑1 (MQ=60)
                                 TCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCT                                                             <  SRR4302543.3188023/94‑1 (MQ=60)
                                  CCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTG                                                            >  SRR4302543.1137949/1‑94 (MQ=60)
                                   CAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGC                                                           >  SRR4302543.6061048/1‑94 (MQ=60)
                                    AACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCT                                                          >  SRR4302543.3297086/1‑94 (MQ=60)
                                    AACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCT                                                          <  SRR4302543.3584433/94‑1 (MQ=60)
                                    AACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCT                                                          >  SRR4302543.7914710/1‑94 (MQ=60)
                                     ACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTG                                                         >  SRR4302543.5620937/1‑94 (MQ=60)
                                      CCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGA                                                        <  SRR4302543.6545120/94‑1 (MQ=60)
                                       CGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAT                                                       <  SRR4302543.1005590/94‑1 (MQ=60)
                                        GGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATA                                                      <  SRR4302543.489007/94‑1 (MQ=60)
                                        GGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATA                                                      <  SRR4302543.4357263/94‑1 (MQ=60)
                                         GCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGGCCTCCAGCTCGGTCCGATACTCTGCTGATAG                                                     >  SRR4302543.6374103/1‑94 (MQ=60)
                                         GCTCATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAG                                                     <  SRR4302543.5275087/94‑1 (MQ=60)
                                          CTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGA                                                    >  SRR4302543.5772191/1‑94 (MQ=60)
                                          CTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGA                                                    >  SRR4302543.1607911/1‑94 (MQ=60)
                                          CTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGA                                                    >  SRR4302543.1537010/1‑94 (MQ=60)
                                           TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA                                                   >  SRR4302543.3444884/1‑94 (MQ=60)
                                           TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA                                                   >  SRR4302543.7751612/1‑94 (MQ=60)
                                           TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA                                                   >  SRR4302543.1579493/1‑94 (MQ=60)
                                           TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA                                                   >  SRR4302543.5555438/1‑94 (MQ=60)
                                            GATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAA                                                  <  SRR4302543.3442435/94‑1 (MQ=60)
                                            GATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAA                                                  >  SRR4302543.2919549/1‑94 (MQ=60)
                                            GATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAA                                                  >  SRR4302543.5620286/1‑94 (MQ=60)
                                            GATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAA                                                  >  SRR4302543.4152146/1‑94 (MQ=60)
                                            GATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAA                                                  >  SRR4302543.5446169/1‑94 (MQ=60)
                                             ATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAA                                                 <  SRR4302543.4727145/94‑1 (MQ=60)
                                             ATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAA                                                 <  SRR4302543.8000051/94‑1 (MQ=60)
                                             ATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAA                                                 >  SRR4302543.3967364/1‑94 (MQ=60)
                                              TCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT                                                <  SRR4302543.4134356/94‑1 (MQ=60)
                                              TCCCGCTCAGTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT                                                <  SRR4302543.6881590/94‑1 (MQ=60)
                                              ACCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT                                                <  SRR4302543.6881591/94‑1 (MQ=60)
                                               CCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC                                               <  SRR4302543.5717103/94‑1 (MQ=60)
                                               CCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC                                               <  SRR4302543.6372846/94‑1 (MQ=60)
                                               CCCGCTCATTAACCGCGACCCACAACGGCGCCTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC                                               <  SRR4302543.6724439/94‑1 (MQ=60)
                                               ACCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC                                               >  SRR4302543.7510187/1‑94 (MQ=60)
                                                 CGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGT                                             >  SRR4302543.4150806/1‑94 (MQ=60)
                                                   CTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGA                                           <  SRR4302543.3123843/94‑1 (MQ=60)
                                                   CTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGA                                           >  SRR4302543.5969960/1‑94 (MQ=60)
                                                   CTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGA                                           >  SRR4302543.800625/1‑94 (MQ=60)
                                                    TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG                                          <  SRR4302543.5018933/94‑1 (MQ=60)
                                                    TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG                                          >  SRR4302543.305835/1‑94 (MQ=60)
                                                    CCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG                                          <  SRR4302543.1705830/94‑1 (MQ=60)
                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                         <  SRR4302543.465527/94‑1 (MQ=60)
                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                         <  SRR4302543.427847/94‑1 (MQ=60)
                                                      ATTACCCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTG                                        <  SRR4302543.6586049/94‑1 (MQ=60)
                                                      ATTAACCGCGACCCACAACGGCGCTTCCGGCAGTAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTG                                        <  SRR4302543.5594680/94‑1 (MQ=60)
                                                      ATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTG                                        >  SRR4302543.2896603/1‑94 (MQ=60)
                                                      ATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTG                                        >  SRR4302543.7885533/1‑94 (MQ=60)
                                                       TTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGG                                       <  SRR4302543.3381801/94‑1 (MQ=60)
                                                        TAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGC                                      <  SRR4302543.1416832/94‑1 (MQ=60)
                                                        TAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGC                                      <  SRR4302543.1233202/94‑1 (MQ=60)
                                                          ACCGCGTCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAT                                    <  SRR4302543.3245149/94‑1 (MQ=60)
                                                          ACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAT                                    >  SRR4302543.7010089/1‑94 (MQ=60)
                                                          ACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAT                                    >  SRR4302543.2645384/1‑94 (MQ=60)
                                                           CCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATC                                   <  SRR4302543.802091/94‑1 (MQ=60)
                                                           CCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATC                                   <  SRR4302543.1529844/94‑1 (MQ=60)
                                                            CGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCG                                  >  SRR4302543.2593540/1‑94 (MQ=60)
                                                              CGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGAC                                <  SRR4302543.6485584/94‑1 (MQ=60)
                                                              CGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGAC                                <  SRR4302543.4010951/94‑1 (MQ=60)
                                                                CCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAG                              <  SRR4302543.3254748/94‑1 (MQ=60)
                                                                 CCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGA                             >  SRR4302543.4020657/1‑94 (MQ=60)
                                                                   CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC                           >  SRR4302543.3362334/1‑94 (MQ=60)
                                                                   CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC                           >  SRR4302543.7204499/1‑94 (MQ=60)
                                                                   CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC                           <  SRR4302543.4603540/94‑1 (MQ=60)
                                                                   CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC                           <  SRR4302543.3480025/94‑1 (MQ=60)
                                                                     CAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAACAGTGAGTGGCATCGACAGAACGA                         >  SRR4302543.3479989/1‑94 (MQ=60)
                                                                      AACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGAC                        <  SRR4302543.5814185/94‑1 (MQ=60)
                                                                      AACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGAC                        <  SRR4302543.7596735/94‑1 (MQ=60)
                                                                      AACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGAC                        >  SRR4302543.2931795/1‑94 (MQ=60)
                                                                      AACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGAC                        <  SRR4302543.4178820/94‑1 (MQ=60)
                                                                       ACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAagacc                       >  SRR4302543.6070889/1‑89 (MQ=60)
                                                                        CGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAC                      >  SRR4302543.6910417/1‑94 (MQ=60)
                                                                        CGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAC                      >  SRR4302543.7919178/1‑94 (MQ=60)
                                                                         GGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACC                     <  SRR4302543.2172186/94‑1 (MQ=60)
                                                                         GGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACC                     <  SRR4302543.7638619/94‑1 (MQ=60)
                                                                          GCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCA                    >  SRR4302543.2833800/1‑94 (MQ=60)
                                                                            GCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCCAA                  >  SRR4302543.2560312/1‑94 (MQ=60)
                                                                            GCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAA                  >  SRR4302543.1375006/1‑94 (MQ=60)
                                                                             CTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAT                 >  SRR4302543.4601010/1‑94 (MQ=60)
                                                                             CTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAT                 >  SRR4302543.2423440/1‑94 (MQ=60)
                                                                             CTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAT                 <  SRR4302543.1538744/94‑1 (MQ=60)
                                                                              TTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATC                >  SRR4302543.3726333/1‑94 (MQ=60)
                                                                                CCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGC              >  SRR4302543.1223299/1‑94 (MQ=60)
                                                                                 CGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCA             <  SRR4302543.1155466/94‑1 (MQ=60)
                                                                                  GGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAA            >  SRR4302543.6300959/1‑94 (MQ=60)
                                                                                  GGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAA            <  SRR4302543.6661840/94‑1 (MQ=60)
                                                                                   GCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAAC           >  SRR4302543.1464508/1‑94 (MQ=60)
                                                                                   GCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAAC           <  SRR4302543.162349/94‑1 (MQ=60)
                                                                                   GCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAAC           <  SRR4302543.646067/94‑1 (MQ=60)
                                                                                    CAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACG          <  SRR4302543.6658381/94‑1 (MQ=60)
                                                                                    CAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACG          <  SRR4302543.5863939/94‑1 (MQ=60)
                                                                                     AGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGA         >  SRR4302543.4622805/1‑94 (MQ=60)
                                                                                     AGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGA         >  SRR4302543.6405761/1‑94 (MQ=60)
                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG        <  SRR4302543.4892632/94‑1 (MQ=60)
                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG        <  SRR4302543.1035067/94‑1 (MQ=60)
                                                                                       GAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGT       <  SRR4302543.2969749/94‑1 (MQ=60)
                                                                                        AAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTT      <  SRR4302543.2427134/94‑1 (MQ=60)
                                                                                        AAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTT      <  SRR4302543.3065779/94‑1 (MQ=60)
                                                                                           GAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCT   <  SRR4302543.5788652/94‑1 (MQ=60)
                                                                                           GAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCT   <  SRR4302543.1637411/94‑1 (MQ=60)
                                                                                            AGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTC  >  SRR4302543.4485246/1‑94 (MQ=60)
                                                                                            AGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTC  >  SRR4302543.4485247/1‑94 (MQ=60)
                                                                                             |                                                                                            
CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTC  >  NC_000913/4211478‑4211663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: