Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,213,360 |
A→G |
M102V (ATG→GTG) |
aceB → |
malate synthase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,213,360 | 0 | A | G | 100.0%
| 619.6
/ NA
| 198 | M102V (ATG→GTG) | aceB | malate synthase A |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (78/120); total (78/120) |
Only 100 of 209 total aligned reads displayed.
CCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGATGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGAC > NC_000913/4213271‑4213449
|
cATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAggtggt < 2:2276571/93‑1 (MQ=255)
cATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAggtggt > 2:4153592/1‑93 (MQ=255)
cATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTggg > 1:2312227/1‑92 (MQ=255)
aTTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGgtggtg > 2:919164/1‑93 (MQ=255)
aTTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGgtggtg > 1:911807/1‑93 (MQ=255)
aTTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTgggg > 2:545928/1‑91 (MQ=255)
aTTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGCCCCGTTCGAGCGCAAGGAGGTg > 1:1537439/1‑93 (MQ=255)
tCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGAt < 1:4111283/93‑1 (MQ=255)
cgcgATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATc < 1:758917/93‑1 (MQ=255)
cgcgATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATc < 2:3499133/93‑1 (MQ=255)
gcgATGCTGATTGGAAAAGTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCa < 1:1570897/93‑1 (MQ=255)
cgATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCaa < 2:4018369/93‑1 (MQ=255)
cgATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCaa < 2:2059518/93‑1 (MQ=255)
cgATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCaa < 1:3368180/93‑1 (MQ=255)
cgATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGACGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCaa < 2:2005491/93‑1 (MQ=255)
gATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAc > 1:659412/1‑93 (MQ=255)
gATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAc > 2:4267511/1‑93 (MQ=255)
aTGCTGATTGGAAAATTCGTGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAcg > 2:2886119/1‑93 (MQ=255)
aTGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAcg > 1:2501319/1‑93 (MQ=255)
aTGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAcg < 1:4653839/93‑1 (MQ=255)
tGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAcgc > 2:3433699/1‑93 (MQ=255)
tGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAcgc > 2:1467337/1‑93 (MQ=255)
tGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAcgc > 2:1024020/1‑93 (MQ=255)
tGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAcgc > 1:3815985/1‑93 (MQ=255)
tGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCt > 1:3324715/1‑93 (MQ=255)
gATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTc > 1:466122/1‑93 (MQ=255)
gATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTc < 2:302958/93‑1 (MQ=255)
gATTGGAAAATTCGCGGGATTCCTGCGGACCTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTc > 2:3309127/1‑93 (MQ=255)
aTTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCa > 1:4643147/1‑93 (MQ=255)
ttGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCaa < 1:3899506/93‑1 (MQ=255)
ttGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCaa < 2:426346/93‑1 (MQ=255)
tGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAAc < 1:4464515/93‑1 (MQ=255)
tGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAAc < 1:3137779/93‑1 (MQ=255)
aaaTTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCa < 1:3117654/93‑1 (MQ=255)
aaTTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAGGCGCTCAACGCCaa > 1:3238252/1‑93 (MQ=255)
aaTTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCaa < 2:228140/93‑1 (MQ=255)
aaTTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGCGGTGATCAACGCGCTCAACGCCaa > 1:3851730/1‑93 (MQ=255)
cgcgGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAAtgtg < 1:113379/93‑1 (MQ=255)
cgGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGaa < 2:562614/93‑1 (MQ=255)
gggATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGaaa < 2:3232320/93‑1 (MQ=255)
ggATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAg > 2:1818079/1‑93 (MQ=255)
ggATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAg < 1:3760169/93‑1 (MQ=255)
gATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGt < 1:1015150/93‑1 (MQ=255)
aTTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTc > 2:3495519/1‑93 (MQ=255)
aTTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTc > 1:2901764/1‑93 (MQ=255)
aTTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTc < 1:2162742/93‑1 (MQ=255)
ttCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCt > 1:1973161/1‑93 (MQ=255)
ttCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCt < 1:1495114/93‑1 (MQ=255)
ccTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCttt < 2:2583289/93‑1 (MQ=255)
ccTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCttt < 2:1121687/93‑1 (MQ=255)
cTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTa > 2:229335/1‑93 (MQ=255)
cTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTa < 2:1506897/93‑1 (MQ=255)
tGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGaaa > 1:96463/1‑85 (MQ=255)
tGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTAt < 1:4188783/93‑1 (MQ=255)
tGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTAt < 2:2198285/93‑1 (MQ=255)
gCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATg < 1:1048915/93‑1 (MQ=255)
gCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATg > 1:60343/1‑93 (MQ=255)
gCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATg > 1:1246612/1‑93 (MQ=255)
ggACTTAGAAGACCGCCGCGTAGAGATAACTTGCCCGGTAGATCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGc > 1:4687418/1‑93 (MQ=255)
gACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGcc < 1:1761269/93‑1 (MQ=255)
gACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGcc > 1:3090798/1‑93 (MQ=255)
ttAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGAt > 2:606785/1‑93 (MQ=255)
gaagaCCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTc > 1:3888499/1‑93 (MQ=255)
agaCCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGa > 1:1725996/1‑93 (MQ=255)
gaCCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGaa < 2:3993080/93‑1 (MQ=255)
gaCCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGaa < 2:70722/93‑1 (MQ=255)
aCCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAg < 2:2417289/93‑1 (MQ=255)
aCCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAg < 1:829774/93‑1 (MQ=255)
ccgccgCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGa < 2:3576578/93‑1 (MQ=255)
gccgcGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGAtt < 2:3589387/93‑1 (MQ=255)
gccgcGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGAtt < 1:522899/93‑1 (MQ=255)
gccgcGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGAtt > 1:4309346/1‑93 (MQ=255)
ccgcGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTc < 1:4615293/93‑1 (MQ=255)
cgcgTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCa < 2:1259108/93‑1 (MQ=255)
gcgTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCAc < 1:2431726/93‑1 (MQ=255)
gTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTg < 2:1792538/93‑1 (MQ=255)
gagaTAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCa > 1:3486118/1‑93 (MQ=255)
gagaTAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCa < 2:2753147/93‑1 (MQ=255)
gagaTAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCa < 2:3892364/93‑1 (MQ=255)
agaTAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCAc < 2:659412/93‑1 (MQ=255)
gaTAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCAcc > 2:2506185/1‑93 (MQ=255)
gaTAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCAcc < 2:3649609/93‑1 (MQ=255)
aTAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCa < 2:4617903/93‑1 (MQ=255)
aaCTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGa < 1:2549212/93‑1 (MQ=255)
aCTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGAc < 2:1676389/93‑1 (MQ=255)
aCTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGAc < 2:3322163/93‑1 (MQ=255)
tGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTg < 2:3772091/93‑1 (MQ=255)
cccGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGaa > 2:3130989/1‑93 (MQ=255)
gTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACaaa > 2:3045818/1‑93 (MQ=255)
tAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAg > 1:264886/1‑93 (MQ=255)
agagCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGt < 2:2929189/93‑1 (MQ=255)
gagCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTg > 2:4550041/1‑93 (MQ=255)
agCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGa < 1:878926/93‑1 (MQ=255)
gcgcAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGAt < 2:1354368/93‑1 (MQ=255)
gcgcAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGAt < 2:2361029/93‑1 (MQ=255)
gcgcAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGAt < 1:1649108/93‑1 (MQ=255)
gcAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGAGTCACTTGCACCAGACTGGGACAAAGTGATCg > 2:2659860/1‑93 (MQ=255)
aaGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGAc > 2:1373372/1‑93 (MQ=255)
aaGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGAc > 1:2967132/1‑93 (MQ=255)
aaGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGAc < 2:1038984/93‑1 (MQ=255)
|
CCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGATGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGAC > NC_000913/4213271‑4213449
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTCCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGATGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACGGG > NC_000913/4213268‑4213452
|
CTTCCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGT < SRR4302535.2119194/94‑1 (MQ=60)
CTTCCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGT > SRR4302535.4166580/1‑94 (MQ=60)
TTCCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTG < SRR4302535.4324855/94‑1 (MQ=60)
TTCCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTG < SRR4302535.983573/94‑1 (MQ=60)
CCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGT < SRR4302535.2328044/94‑1 (MQ=60)
CCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGT > SRR4302535.4344632/1‑94 (MQ=60)
ctgcgactatgtaaataaaaaaagccgggggatccccgcgcACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTG < SRR4302535.647487/53‑1 (MQ=60)
CATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTG > SRR4302535.2502797/1‑94 (MQ=60)
CATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTG > SRR4302535.918290/1‑94 (MQ=60)
CATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGCCCCGTTCGAGCGCAAGGAGGTG > SRR4302535.1548518/1‑94 (MQ=60)
CATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACAGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTG > SRR4302535.3487710/1‑94 (MQ=60)
TTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGAT < SRR4302535.134771/94‑1 (MQ=60)
TCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATC < SRR4302535.4139425/94‑1 (MQ=60)
TCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATC < SRR4302535.2585248/94‑1 (MQ=60)
CGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCA < SRR4302535.641825/94‑1 (MQ=60)
CGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCA < SRR4302535.764263/94‑1 (MQ=60)
GCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAA > SRR4302535.4244625/1‑94 (MQ=60)
GCGATGCTGATTGGAAAAGTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAA < SRR4302535.1582238/94‑1 (MQ=60)
CGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAC > SRR4302535.1004808/1‑94 (MQ=60)
CGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAC < SRR4302535.3391616/94‑1 (MQ=60)
CGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAC > SRR4302535.664011/1‑94 (MQ=60)
CGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAC < SRR4302535.735650/94‑1 (MQ=60)
GATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACG > SRR4302535.1748777/1‑94 (MQ=60)
GATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACG > SRR4302535.2519358/1‑94 (MQ=60)
GATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACG < SRR4302535.4471125/94‑1 (MQ=60)
ATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGC > SRR4302535.4686474/1‑94 (MQ=60)
ATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGC < SRR4302535.4685346/94‑1 (MQ=60)
ATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGC > SRR4302535.3842312/1‑94 (MQ=60)
CTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCT > SRR4302535.3347850/1‑94 (MQ=60)
TGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTC < SRR4302535.822789/94‑1 (MQ=60)
TGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTC > SRR4302535.469385/1‑94 (MQ=60)
GATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCA > SRR4302535.4674617/1‑94 (MQ=60)
TTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAAC < SRR4302535.3926219/94‑1 (MQ=60)
TGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACG < SRR4302535.4495136/94‑1 (MQ=60)
TGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACG < SRR4302535.3671452/94‑1 (MQ=60)
TGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACG < SRR4302535.3159615/94‑1 (MQ=60)
AAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAAGGCGCTCAACGCCAA > SRR4302535.3260734/1‑94 (MQ=60)
AAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAA < SRR4302535.3139358/94‑1 (MQ=60)
AAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGCGGTGATCAACGCGCTCAACGCCAA > SRR4302535.3878233/1‑94 (MQ=60)
AATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAAT > SRR4302535.1599356/1‑94 (MQ=60)
CGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGA > SRR4302535.4655459/1‑94 (MQ=60)
CGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGA < SRR4302535.114172/94‑1 (MQ=60)
CGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGA > SRR4302535.3073472/1‑94 (MQ=60)
GGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGT > SRR4302535.3918824/1‑94 (MQ=60)
GGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGT < SRR4302535.3786157/94‑1 (MQ=60)
GGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGT > SRR4302535.329731/1‑94 (MQ=60)
GATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTC < SRR4302535.1022369/94‑1 (MQ=60)
GATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTC > SRR4302535.2922275/1‑94 (MQ=60)
ATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCT > SRR4302535.1987371/1‑94 (MQ=60)
ATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCT < SRR4302535.2178260/94‑1 (MQ=60)
ATGCCTGCGGACTTAGAAGACCGCCGCGTAGAGATATCTGGCCCGGTAGAGCGCAAGGTCGTGATCAACGCGCTCAACGCCAATGTTAAAGTCT < SRR4302535.3116172/94‑1 (MQ=60)
TTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTT < SRR4302535.1505863/94‑1 (MQ=60)
TCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTT > SRR4302535.125226/1‑94 (MQ=60)
TCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTT < SRR4302535.4546867/94‑1 (MQ=60)
CCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTA > SRR4302535.1580791/1‑94 (MQ=60)
CTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGaccacgc > SRR4302535.97145/1‑87 (MQ=60)
TGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATG > SRR4302535.1255506/1‑94 (MQ=60)
TGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATG < SRR4302535.4217454/94‑1 (MQ=60)
TGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATG > SRR4302535.60790/1‑94 (MQ=60)
GCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGG < SRR4302535.1056376/94‑1 (MQ=60)
CGGACTTAGAAGACCGCCGCGTAGAGATAACTTGCCCGGTAGATCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGC > SRR4302535.4719246/1‑94 (MQ=60)
GGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCC > SRR4302535.3112323/1‑94 (MQ=60)
GGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCC < SRR4302535.178998/94‑1 (MQ=60)
GGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGAC < SRR4302535.864042/94‑1 (MQ=60)
GACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCG < SRR4302535.1774024/94‑1 (MQ=60)
GACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCG < SRR4302535.1033221/94‑1 (MQ=60)
CTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGAT < SRR4302535.1681621/94‑1 (MQ=60)
TTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATT < SRR4302535.475622/94‑1 (MQ=60)
TTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATT < SRR4302535.868428/94‑1 (MQ=60)
TAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTT < SRR4302535.4211081/94‑1 (MQ=60)
TAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTT < SRR4302535.593751/94‑1 (MQ=60)
AGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTC > SRR4302535.3915167/1‑94 (MQ=60)
GAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCG < SRR4302535.4712387/94‑1 (MQ=60)
AAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGA > SRR4302535.1738476/1‑94 (MQ=60)
GACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAG > SRR4302535.2561168/1‑94 (MQ=60)
ACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGA < SRR4302535.835587/94‑1 (MQ=60)
CCGCCGCGTAGAGATAGCTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGAT < SRR4302535.2154667/94‑1 (MQ=60)
CGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATT > SRR4302535.4338827/1‑94 (MQ=60)
CGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATT < SRR4302535.4682635/94‑1 (MQ=60)
GCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTC < SRR4302535.526557/94‑1 (MQ=60)
CCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCA < SRR4302535.4646657/94‑1 (MQ=60)
CGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCAC > SRR4302535.1545749/1‑94 (MQ=60)
GCGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACT < SRR4302535.2449247/94‑1 (MQ=60)
CGTAGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTG < SRR4302535.3144195/94‑1 (MQ=60)
AGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCA > SRR4302535.3510320/1‑94 (MQ=60)
AGAGATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCA > SRR4302535.218987/1‑94 (MQ=60)
ATAACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAG > SRR4302535.939666/1‑94 (MQ=60)
AACTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGAC < SRR4302535.2567557/94‑1 (MQ=60)
CTGGCCCGGTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTG < SRR4302535.3863115/94‑1 (MQ=60)
GTAGAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAG > SRR4302535.266725/1‑94 (MQ=60)
GAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGA < SRR4302535.2432084/94‑1 (MQ=60)
GAGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGA < SRR4302535.4046364/94‑1 (MQ=60)
AGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGAT < SRR4302535.2987807/94‑1 (MQ=60)
AGCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGAT < SRR4302535.885151/94‑1 (MQ=60)
GCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATC < SRR4302535.1661037/94‑1 (MQ=60)
GCGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATC < SRR4302535.3297783/94‑1 (MQ=60)
CGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCG < SRR4302535.3884402/94‑1 (MQ=60)
CGCAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCG < SRR4302535.3349217/94‑1 (MQ=60)
CAAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGAC > SRR4302535.2987951/1‑94 (MQ=60)
AAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACG < SRR4302535.901463/94‑1 (MQ=60)
AAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACG > SRR4302535.25276/1‑94 (MQ=60)
AAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACG > SRR4302535.865124/1‑94 (MQ=60)
AAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACG > SRR4302535.4012098/1‑94 (MQ=60)
AAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACG < SRR4302535.2888309/94‑1 (MQ=60)
AAGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACG < SRR4302535.3220472/94‑1 (MQ=60)
AGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACGG < SRR4302535.1763946/94‑1 (MQ=60)
AGGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACGG < SRR4302535.2915738/94‑1 (MQ=60)
GGTGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACGGG < SRR4302535.2996725/94‑1 (MQ=60)
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CTTCCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGATGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACGGG > NC_000913/4213268‑4213452
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
