Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,223,595 |
C→T |
A730V (GCC→GTC) |
metH → |
B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,223,595 | 0 | C | T | 99.4%
| 601.9
/ NA
| 178 | A730V (GCC→GTC) | metH | B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (102/75); minor base G (1/0); total (103/75) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 191 total aligned reads displayed.
GGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGCCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCAC > NC_000913/4223504‑4223683
|
gCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCt > 1:1510462/1‑93 (MQ=255)
gCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCt > 1:4263477/1‑93 (MQ=255)
cATGAATGTGGTGGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTa < 2:1481950/93‑1 (MQ=255)
aTGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTAc > 2:1645923/1‑93 (MQ=255)
aTGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTAc > 1:1701752/1‑93 (MQ=255)
aTGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTAc > 1:445068/1‑93 (MQ=255)
tGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTAcc > 1:4292376/1‑93 (MQ=255)
tGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTAcc > 2:768049/1‑93 (MQ=255)
gAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCt > 2:1665529/1‑93 (MQ=255)
aaTGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTc > 1:3735732/1‑93 (MQ=255)
aaTGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTc > 1:1380160/1‑93 (MQ=255)
aTGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCg > 1:3357410/1‑93 (MQ=255)
tgtgGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGa < 2:3095352/93‑1 (MQ=255)
ggTCGGTGACCTGCTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGTGCGCGTCATGAAACAGGCGGGGGTCTACCTCGAAcc > 2:10370/1‑93 (MQ=255)
gTCGGCGACCTGTTTGGCGAAGGGAAAATGTTTCTGCCACAGGTGGTCAAATAGGCGCGCGTCATGAAACAGGCGGGGGTCTACCTCGAACCg > 2:1301322/1‑93 (MQ=255)
gTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCg > 2:3578665/1‑93 (MQ=255)
cGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGtt < 2:3261651/93‑1 (MQ=255)
cGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGtt > 1:715243/1‑93 (MQ=255)
cGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCAACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGtt > 2:3594156/1‑93 (MQ=255)
gtgACGTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTa < 1:3419474/91‑1 (MQ=255)
gCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTa < 2:3837001/93‑1 (MQ=255)
gCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTa < 1:1459545/93‑1 (MQ=255)
gACCGGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTAtt < 1:3919116/93‑1 (MQ=255)
aCCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTg < 2:3140369/93‑1 (MQ=255)
cTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGaa > 2:1082416/1‑93 (MQ=255)
cTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGaa < 2:2466206/93‑1 (MQ=255)
tGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAg > 1:4394077/1‑93 (MQ=255)
tGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAg > 2:2302554/1‑93 (MQ=255)
tGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAg > 2:3341998/1‑93 (MQ=255)
gTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGc > 1:998995/1‑93 (MQ=255)
gTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGCCGGTGGTCTACCTCGAACCGTTTATTGAAGc > 1:1647626/1‑93 (MQ=255)
tttGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGcc > 1:2791627/1‑93 (MQ=255)
ttgggCGAAGGGAAAATGTCCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGcc < 2:722244/90‑1 (MQ=255)
ttGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCa < 1:835115/93‑1 (MQ=255)
gcaaaGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCa < 2:2283059/90‑1 (MQ=255)
gaggggAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGTGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCaaa < 1:4633867/90‑1 (MQ=255)
gaggggAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCaaa < 2:3373131/90‑1 (MQ=255)
gAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCaaa < 2:2436362/93‑1 (MQ=255)
aGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAaga < 1:2616338/93‑1 (MQ=255)
aGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAaga < 2:1621997/93‑1 (MQ=255)
aGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAaga > 2:4345576/1‑93 (MQ=255)
aGGGAAAAGGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAaga < 2:1879385/93‑1 (MQ=255)
gggAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAagag > 1:291092/1‑93 (MQ=255)
gggAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAagag > 1:1773826/1‑93 (MQ=255)
ggAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGc > 1:1873395/1‑93 (MQ=255)
ggAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGc > 1:1581294/1‑93 (MQ=255)
gAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCa > 2:1711865/1‑93 (MQ=255)
aaaaTTTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAg < 1:4552749/93‑1 (MQ=255)
aaaaTGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAg < 1:2470808/93‑1 (MQ=255)
aaaaTGTCCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAg < 1:4059074/93‑1 (MQ=255)
aaTGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAggg > 2:678972/1‑93 (MQ=255)
aaTGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAggg < 1:878445/93‑1 (MQ=255)
aTGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGc > 2:1127109/1‑93 (MQ=255)
ttCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCaaa > 2:2555835/1‑93 (MQ=255)
cTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAAcc > 2:2831737/1‑93 (MQ=255)
gCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCaa < 1:1038643/93‑1 (MQ=255)
ccACAGGGGGTCAAATCGGCGCGCGTCATGAAACAGGCGGGGGTCTACCTCGAACCGGTTATTGAAGCCAGCAAAGCGCAGCGCAAAACCAAc > 2:2591209/1‑93 (MQ=255)
cacaGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACg > 1:921988/1‑93 (MQ=255)
cacaGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACg > 1:2205813/1‑93 (MQ=255)
acaGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACgg > 1:1235041/1‑93 (MQ=255)
caGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGc > 1:3835710/1‑93 (MQ=255)
caGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGc < 1:3224535/93‑1 (MQ=255)
aGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCa > 1:2092558/1‑93 (MQ=255)
aGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCa > 1:2189386/1‑93 (MQ=255)
aGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCa > 1:1712950/1‑93 (MQ=255)
ggtggtCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCaa < 1:3296333/93‑1 (MQ=255)
ggtggtCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCaa < 2:3433035/93‑1 (MQ=255)
gtggtCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAg > 1:242869/1‑93 (MQ=255)
ggtCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGAt < 2:2595895/93‑1 (MQ=255)
gtCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATg < 1:293117/93‑1 (MQ=255)
gtCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATg > 2:1679306/1‑93 (MQ=255)
gtCAAATCGGCGCGCGTCATGAAACAGGCGGTGGGCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATg > 2:408483/1‑93 (MQ=255)
aaaTCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTg < 1:1140712/93‑1 (MQ=255)
aaTCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGa < 2:1795540/93‑1 (MQ=255)
aaTCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGa < 2:1271129/93‑1 (MQ=255)
aaTCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGa > 1:303156/1‑93 (MQ=255)
aTCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGAt < 1:2359351/93‑1 (MQ=255)
aTCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGAt < 1:3828706/93‑1 (MQ=255)
tCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATc < 1:3113491/93‑1 (MQ=255)
gcgcgcGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGcc < 2:468096/93‑1 (MQ=255)
tCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGa < 1:3080813/93‑1 (MQ=255)
tCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGa < 1:950156/93‑1 (MQ=255)
cATGAAGCAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGCGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGaa < 1:634703/93‑1 (MQ=255)
cATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGaa < 2:1671094/93‑1 (MQ=255)
cATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGaa < 2:4323877/93‑1 (MQ=255)
cATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGaa < 1:790750/93‑1 (MQ=255)
cATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGaa < 1:4481058/93‑1 (MQ=255)
aTGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAg > 1:2020833/1‑93 (MQ=255)
tGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAgg < 1:4996/93‑1 (MQ=255)
tGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAgg < 1:1827678/93‑1 (MQ=255)
gAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGCAggg > 2:2677622/1‑93 (MQ=255)
aaCAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCg > 2:4218780/1‑93 (MQ=255)
aCAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGa > 1:3555134/1‑93 (MQ=255)
cAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGag > 1:1316242/1‑92 (MQ=255)
aGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACg > 1:1090582/1‑93 (MQ=255)
ggCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGt > 1:3768074/1‑93 (MQ=255)
gCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTc > 1:1911518/1‑93 (MQ=255)
ggtggtCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCa < 1:165933/93‑1 (MQ=255)
ggtggtCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCa < 2:896913/93‑1 (MQ=255)
gTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCACCGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCAc < 2:3539731/93‑1 (MQ=255)
|
GGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGCCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCAC > NC_000913/4223504‑4223683
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGCCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACGACAT > NC_000913/4223502‑4223688
|
ACGGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGT < SRR4302535.1569486/94‑1 (MQ=60)
CGGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTC < SRR4302535.1820878/94‑1 (MQ=60)
GGCATGAATGTGGTCGGCTTTCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCT < SRR4302535.3072449/94‑1 (MQ=60)
GGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCT > SRR4302535.4292673/1‑94 (MQ=60)
GGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCT < SRR4302535.332259/94‑1 (MQ=60)
GGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCT > SRR4302535.1521345/1‑94 (MQ=60)
GGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCT > SRR4302535.436578/1‑94 (MQ=60)
CATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTAC > SRR4302535.1714055/1‑94 (MQ=60)
CATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTAC > SRR4302535.448183/1‑94 (MQ=60)
ATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACC > SRR4302535.4321752/1‑94 (MQ=60)
GAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTC > SRR4302535.3761587/1‑94 (MQ=60)
GAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTC > SRR4302535.1390003/1‑94 (MQ=60)
GAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTC > SRR4302535.2389586/1‑94 (MQ=60)
GAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGGGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTC > SRR4302535.3303175/1‑94 (MQ=60)
AATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCG > SRR4302535.3380785/1‑94 (MQ=60)
AATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCG > SRR4302535.2956895/1‑94 (MQ=60)
AATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCG > SRR4302535.221624/1‑94 (MQ=60)
GTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTCCCTCGAAC > SRR4302535.4224727/1‑94 (MQ=60)
TGGTCGGCGACCTGTGTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACC < SRR4302535.2083484/94‑1 (MQ=60)
GTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGT < SRR4302535.1981077/94‑1 (MQ=60)
TCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTT > SRR4302535.720263/1‑94 (MQ=60)
GGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTA > SRR4302535.4489792/1‑94 (MQ=60)
GTGACGTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTAT < SRR4302535.3443260/94‑1 (MQ=60)
GCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTAT < SRR4302535.1470001/94‑1 (MQ=60)
CGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATT > SRR4302535.3853728/1‑94 (MQ=60)
GACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTG > SRR4302535.157224/1‑94 (MQ=60)
GACCGGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTG < SRR4302535.3945920/94‑1 (MQ=60)
ACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTAATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGA > SRR4302535.1748689/1‑94 (MQ=60)
CCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAA > SRR4302535.1904636/1‑94 (MQ=60)
CTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAG > SRR4302535.4424144/1‑94 (MQ=60)
CTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAG < SRR4302535.1411417/94‑1 (MQ=60)
CTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAG > SRR4302535.1249062/1‑94 (MQ=60)
CTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAG > SRR4302535.358701/1‑94 (MQ=60)
TGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGC > SRR4302535.1006081/1‑94 (MQ=60)
TGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGCCGGTGGTCTACCTCGAACCGTTTATTGAAGC > SRR4302535.1659536/1‑94 (MQ=60)
GTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCC > SRR4302535.2811493/1‑94 (MQ=60)
TTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAG > SRR4302535.3783710/1‑94 (MQ=60)
TTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAG < SRR4302535.840972/94‑1 (MQ=60)
GGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCA > SRR4302535.3319709/1‑94 (MQ=60)
GGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCA < SRR4302535.835382/94‑1 (MQ=60)
GCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAA < SRR4302535.4605382/94‑1 (MQ=60)
GAGGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGTGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAG < SRR4302535.4665300/94‑1 (MQ=60)
GAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAG < SRR4302535.4046788/94‑1 (MQ=60)
AGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAG > SRR4302535.2171290/1‑94 (MQ=60)
AGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAG > SRR4302535.1786678/1‑94 (MQ=60)
AGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAG > SRR4302535.293130/1‑94 (MQ=60)
AGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAG < SRR4302535.2635097/94‑1 (MQ=60)
GGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGC > SRR4302535.1886895/1‑94 (MQ=60)
GGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGC > SRR4302535.1592708/1‑94 (MQ=60)
GGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGC < SRR4302535.693668/94‑1 (MQ=60)
GAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAG > SRR4302535.3906208/1‑94 (MQ=60)
AAAATTTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGG < SRR4302535.4583859/94‑1 (MQ=60)
AAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGG < SRR4302535.2488622/94‑1 (MQ=60)
AAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGG < SRR4302535.905654/94‑1 (MQ=60)
AAAATGTCCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGG < SRR4302535.4086856/94‑1 (MQ=60)
AGATGTTCCTGCCACAGGTGGTCAAGTCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGG < SRR4302535.3120368/94‑1 (MQ=60)
AATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGC < SRR4302535.884664/94‑1 (MQ=60)
attgtactgacgCAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTCGTCTACCTCGCACCGTTTATTGAAGCCAGCAAAGAGCAGGGCA < SRR4302535.2755209/82‑1 (MQ=60)
ATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCA < SRR4302535.1000410/94‑1 (MQ=60)
TGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAA > SRR4302535.3525163/1‑94 (MQ=60)
GTTCCTGCCACAGGAGGTCAAATCGGCGCGCGCCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGCGCAGGGCAAA > SRR4302535.163487/1‑94 (MQ=60)
TCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAAC > SRR4302535.2502978/1‑94 (MQ=60)
CCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACC > SRR4302535.4677341/1‑94 (MQ=60)
CTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCA > SRR4302535.2836382/1‑94 (MQ=60)
CTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCA < SRR4302535.182693/94‑1 (MQ=60)
GCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAAC < SRR4302535.1046016/94‑1 (MQ=60)
GCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAAC > SRR4302535.625554/1‑94 (MQ=60)
CCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACG > SRR4302535.928524/1‑94 (MQ=60)
CCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACG > SRR4302535.2221523/1‑94 (MQ=60)
CACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGG > SRR4302535.3170907/1‑94 (MQ=60)
CACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGG > SRR4302535.3855760/1‑94 (MQ=60)
CACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGG > SRR4302535.1243866/1‑94 (MQ=60)
ACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGC > SRR4302535.3862160/1‑94 (MQ=60)
CAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCA < SRR4302535.3246888/94‑1 (MQ=60)
CAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCA > SRR4302535.2107635/1‑94 (MQ=60)
CAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCA > SRR4302535.2204976/1‑94 (MQ=60)
CAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCA > SRR4302535.1725333/1‑94 (MQ=60)
GGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAG > SRR4302535.1138626/1‑94 (MQ=60)
GGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAG < SRR4302535.3319251/94‑1 (MQ=60)
GGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAG > SRR4302535.244531/1‑94 (MQ=60)
TGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGAT > SRR4302535.121749/1‑94 (MQ=60)
GTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGG < SRR4302535.295166/94‑1 (MQ=60)
GTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGG < SRR4302535.4544754/94‑1 (MQ=60)
AAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGA < SRR4302535.1148840/94‑1 (MQ=60)
AAATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGA > SRR4302535.305263/1‑94 (MQ=60)
ATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATC < SRR4302535.3855114/94‑1 (MQ=60)
ATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATC < SRR4302535.853972/94‑1 (MQ=60)
ATCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATC < SRR4302535.2376284/94‑1 (MQ=60)
TCGGCGCGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCG < SRR4302535.3135165/94‑1 (MQ=60)
CGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCG > SRR4302535.2285296/1‑94 (MQ=60)
CGCGTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCG > SRR4302535.2675989/1‑94 (MQ=60)
GTCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGA > SRR4302535.1363006/1‑94 (MQ=60)
TCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAA < SRR4302535.956884/94‑1 (MQ=60)
TCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAA < SRR4302535.3102291/94‑1 (MQ=60)
TCATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAA < SRR4302535.3059181/94‑1 (MQ=60)
CATGAAGCAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGCGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAG < SRR4302535.639124/94‑1 (MQ=60)
CATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAG < SRR4302535.4511816/94‑1 (MQ=60)
CATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAG < SRR4302535.1475241/94‑1 (MQ=60)
CATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAG > SRR4302535.2035401/1‑94 (MQ=60)
CATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAG < SRR4302535.796300/94‑1 (MQ=60)
ATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGG < SRR4302535.4312184/94‑1 (MQ=60)
ATGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGG > SRR4302535.788899/1‑94 (MQ=60)
TGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGG < SRR4302535.5041/94‑1 (MQ=60)
TGAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGG < SRR4302535.1840876/94‑1 (MQ=60)
GAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGC < SRR4302535.1670465/94‑1 (MQ=60)
GAAACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGC < SRR4302535.1879355/94‑1 (MQ=60)
AACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGA > SRR4302535.3579795/1‑94 (MQ=60)
ACAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGAG > SRR4302535.1325643/1‑94 (MQ=60)
CAGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACG > SRR4302535.1098354/1‑94 (MQ=60)
AGGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGT > SRR4302535.3794088/1‑94 (MQ=60)
GGCGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTC > SRR4302535.1925293/1‑94 (MQ=60)
CGGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCA > SRR4302535.2938596/1‑94 (MQ=60)
GGTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCAC < SRR4302535.167089/94‑1 (MQ=60)
GTGGTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACG < SRR4302535.1691479/94‑1 (MQ=60)
GTCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACGACA < SRR4302535.1818311/94‑1 (MQ=60)
TCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACGACAT < SRR4302535.1746663/94‑1 (MQ=60)
TCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACGACAT < SRR4302535.2487767/94‑1 (MQ=60)
TCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACGACAT < SRR4302535.1534969/94‑1 (MQ=60)
TCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACGACAC > SRR4302535.3422113/1‑94 (MQ=60)
|
ACGGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGCCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACGACAT > NC_000913/4223502‑4223688
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
