Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,225,050	A→G	E1215G (GAG→GGG)	metH →	B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,225,050	0	A	G	99.4%	1036.1 / ‑5.4	329	E1215G (GAG→GGG)	metH	B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase
Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (173/154); total (174/155)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 337 total aligned reads displayed.

CGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGT  >  NC_000913/4224960‑4225139

cGGACAGCAAGTATTACGTTGAGGCACAACTCCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGgc                                                                                         <  1:2467142/93‑1 (MQ=255)

 ggACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGgcg                                                                                        >  1:3488751/1‑93 (MQ=255)

   aCAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgct                                                                                      >  1:4346677/1‑93 (MQ=255)

   aCAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgct                                                                                      >  1:7705057/1‑93 (MQ=255)

    cAGCAAGTCCTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgctg                                                                                     <  1:36758/93‑1 (MQ=255)

    cAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgctg                                                                                     >  1:2133825/1‑93 (MQ=255)

    cAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgctg                                                                                     >  2:2081959/1‑93 (MQ=255)

      gCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgctggc                                                                                   >  1:836142/1‑93 (MQ=255)

       cAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgctggct                                                                                  >  1:7479128/1‑93 (MQ=255)

        aaGTACTACGCTGTAGCACAAATTCGGCGCGATCAGGTTAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgctggctg                                                                                 <  2:3870303/93‑1 (MQ=255)

         aGTTCTACGGTGTAGAACAAATTCGGCGGAAGCAGGTAGAAAATTAGCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGctggctgg                                                                                <  1:535007/93‑1 (MQ=255)

           tactacGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCa                                                                              >  1:7283650/1‑93 (MQ=255)

           tactacGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCa                                                                              >  2:5678353/1‑93 (MQ=255)

            gctacGCTGAAGCAAAAATCCAGCGCGACGGGGTTGAAGATTCCGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCAc                                                                             <  2:317954/92‑1 (MQ=255)

            actacGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCAc                                                                             >  2:1426111/1‑93 (MQ=255)

              tacGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCg                                                                           >  1:7731164/1‑93 (MQ=255)

               acGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGa                                                                          >  2:4762158/1‑93 (MQ=255)

                  cTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATc                                                                       >  1:6942229/1‑93 (MQ=255)

                  cTGTAGCACAAATCCAGCGCGATCAGGTGAAAGATTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATc                                                                       <  1:100449/93‑1 (MQ=255)

                   tGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCt                                                                      <  2:1626811/93‑1 (MQ=255)

                   tGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCt                                                                      <  2:2342523/93‑1 (MQ=255)

                    gTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTg                                                                     >  1:7887706/1‑93 (MQ=255)

                     tAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTgg                                                                    <  2:3352083/93‑1 (MQ=255)

                       gCAAAAATTCAGCGCGATCAGGTTGAAGTTTACGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTgggg                                                                  <  1:6338046/93‑1 (MQ=255)

                        caaaaaTCCAGCGCGATCAGGTTGAAGATTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGt                                                                 <  2:6589410/90‑1 (MQ=255)

                        caaaaaTCCAGCGCGATCAGGTGAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGt                                                                 <  2:4507375/90‑1 (MQ=255)

                         acaAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTa                                                                <  1:2731128/93‑1 (MQ=255)

                         acaAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTa                                                                >  1:6510009/1‑93 (MQ=255)

                         acaAATTCAGCGCGATCAGGTTAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTa                                                                <  1:41504/93‑1 (MQ=255)

                         aaaaaTTCAGCGCGATCAGTTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTa                                                                <  1:2757289/91‑1 (MQ=255)

                         aaaaaTTCAGCGCGATCAGGTTGAAGATTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTa                                                                <  2:5945339/91‑1 (MQ=255)

                          aaaaTTCGGCGCAATCAGTTTGAAGATGATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTAt                                                               <  2:4148072/92‑1 (MQ=255)

                            aaTTCAGCGCGGTCAGGTTGAAAATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGa                                                             <  1:411725/93‑1 (MQ=255)

                            aaTTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGa                                                             >  1:3044916/1‑93 (MQ=255)

                              ttCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAcg                                                           >  1:5776513/1‑93 (MQ=255)

                               tCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAcgc                                                          >  2:1399070/1‑93 (MQ=255)

                               tCAGCGCGATCAGGTGGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAcgc                                                          <  1:2341877/93‑1 (MQ=255)

                                  gcgcGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGa                                                       >  2:2663703/1‑93 (MQ=255)

                                  gcgcGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGa                                                       >  2:7109152/1‑93 (MQ=255)

                                     ggATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTg                                                    <  2:6852829/92‑1 (MQ=255)

                                     cgATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGCATCTGGGGTATGACGCGGAGTg                                                    >  2:1193467/1‑93 (MQ=255)

                                       aTCGGGTTGAAGTTTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAt                                                  <  1:1575391/93‑1 (MQ=255)

                                       aTCAGTTTGAAGATTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAt                                                  <  1:7427691/93‑1 (MQ=255)

                                       aTCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGGATGACGCGGACTGAt                                                  >  2:4251695/1‑93 (MQ=255)

                                         gaGGTTGAAGTTTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTc                                                <  1:7764639/92‑1 (MQ=255)

                                         cAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTc                                                >  1:4548714/1‑93 (MQ=255)

                                          aGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTca                                               >  1:7145163/1‑93 (MQ=255)

                                            gTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTccca                                             >  2:1678825/1‑93 (MQ=255)

                                            gTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCGGGCACCGAATCTGGGGCATGACGCGGACTGATTcaca                                             >  1:876811/1‑93 (MQ=255)

                                              tGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACaaa                                           <  2:3588713/93‑1 (MQ=255)

                                               gAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAAt                                          >  2:4093933/1‑93 (MQ=255)

                                                aaGATTCTCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATc                                         <  1:3939184/93‑1 (MQ=255)

                                                  gATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTg                                       >  2:274989/1‑93 (MQ=255)

                                                  gATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTg                                       <  2:6866606/93‑1 (MQ=255)

                                                  atttATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTg                                       <  1:5734008/91‑1 (MQ=255)

                                                   aTTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGt                                      >  2:5612769/1‑93 (MQ=255)

                                                   aTTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGt                                      <  2:3097935/93‑1 (MQ=255)

                                                    ttATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTc                                     >  2:5378136/1‑93 (MQ=255)

                                                     tATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCa                                    >  1:5566789/1‑93 (MQ=255)

                                                     gaaacccGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATACACAAATCTGTCa                                    <  2:6987659/89‑1 (MQ=255)

                                                       tGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACt                                  >  2:1834561/1‑93 (MQ=255)

                                                         cccGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACttt                                <  1:1960768/93‑1 (MQ=255)

                                                           cgccgTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTc                              >  2:5848349/1‑93 (MQ=255)

                                                            gccgTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTcc                             >  1:1251364/1‑93 (MQ=255)

                                                               gTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTa                          <  1:2534037/93‑1 (MQ=255)

                                                                tAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTac                         >  1:6843718/1‑93 (MQ=255)

                                                                tAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGGATGACGCGGACAGATTCACAAATCTGTCACTTTTCCTTac                         >  2:2416295/1‑93 (MQ=255)

                                                                 aaaGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTaca                        >  1:1177570/1‑93 (MQ=255)

                                                                 aaaGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTaca                        >  2:6070862/1‑93 (MQ=255)

                                                                 aaaGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTaca                        <  1:3845077/93‑1 (MQ=255)

                                                                 aaaGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTaca                        >  1:6249544/1‑93 (MQ=255)

                                                                  aaGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTacaa                       <  2:5030362/93‑1 (MQ=255)

                                                                  aaGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTacaa                       <  2:5189729/93‑1 (MQ=255)

                                                                   aGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTacaac                      <  2:61311/93‑1 (MQ=255)

                                                                     gTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAcaacaa                    >  2:101867/1‑93 (MQ=255)

                                                                      tATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaa                   >  1:7217004/1‑93 (MQ=255)

                                                                      tATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaa                   <  1:5148794/93‑1 (MQ=255)

                                                                      tATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaa                   >  2:527540/1‑93 (MQ=255)

                                                                       aTGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaac                  >  1:7849219/1‑93 (MQ=255)

                                                                        tGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaaca                 <  2:7705056/93‑1 (MQ=255)

                                                                        tGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaaca                 <  2:4346676/93‑1 (MQ=255)

                                                                         gAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAg                <  2:2529710/93‑1 (MQ=255)

                                                                         gAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAg                <  2:6805046/93‑1 (MQ=255)

                                                                           gCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAggg              >  1:6189701/1‑93 (MQ=255)

                                                                              ttACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGgcgc           >  2:3797622/1‑93 (MQ=255)

                                                                              ttACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGgcgc           >  2:5063180/1‑93 (MQ=255)

                                                                              ttACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGgcgc           <  2:7211466/93‑1 (MQ=255)

                                                                              ttACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGgcgc           >  1:2236219/1‑93 (MQ=255)

                                                                              ttACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGgcgc           >  1:3292336/1‑93 (MQ=255)

                                                                              ttACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGgcgc           <  2:225846/93‑1 (MQ=255)

                                                                                  cGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCaa       <  1:2848780/93‑1 (MQ=255)

                                                                                   gAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAAt      <  1:1400414/93‑1 (MQ=255)

                                                                                     aGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGa    <  1:7392655/93‑1 (MQ=255)

                                                                                     aGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGa    <  1:4665659/93‑1 (MQ=255)

                                                                                     aGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGa    >  1:4840643/1‑93 (MQ=255)

                                                                                     aGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGa    >  2:4818418/1‑93 (MQ=255)

                                                                                      gTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACATCAAACAGGGCGCTCAATGAg   <  2:7497273/93‑1 (MQ=255)

                                                                                      gTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAg   >  2:4023016/1‑93 (MQ=255)

                                                                                      gTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAg   <  1:4954451/93‑1 (MQ=255)

                                                                                       ttGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAgc  <  2:7118433/93‑2 (MQ=255)

CGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGT  >  NC_000913/4224960‑4225139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCC  >  NC_000913/4224957‑4225143

CCCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGG                                                                                               <  SRR4302543.3660049/94‑1 (MQ=60)

ACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGTTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGG                                                                                               <  SRR4302543.7915223/94‑1 (MQ=60)

ACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGG                                                                                               >  SRR4302543.3574995/1‑94 (MQ=60)

ACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGG                                                                                               >  SRR4302543.2423782/1‑94 (MQ=60)

ACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGG                                                                                               >  SRR4302543.1362087/1‑94 (MQ=60)

 CCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGG                                                                                              <  SRR4302543.650698/94‑1 (MQ=60)

 CCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTAGGCCCGCCGTAAAGGTATGAGCGTTACAGAAGTTGGG                                                                                              <  SRR4302543.341810/94‑1 (MQ=60)

 CCCGGACAGAAAGTACTACGCTGTAGCAAAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGG                                                                                              <  SRR4302543.2405159/94‑1 (MQ=60)

  CGGGACAGCAATTACTACGCTGTAGCAAAAATTCAGCGCGATCAGTTTAAAGTTTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGC                                                                                             <  SRR4302543.7273339/94‑1 (MQ=60)

   CGGACAGCAAGTATTACGTTGAGGCACAACTCCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCG                                                                                            <  SRR4302543.2489407/94‑1 (MQ=60)

   CGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCG                                                                                            >  SRR4302543.3519980/1‑94 (MQ=60)

   CGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCG                                                                                            <  SRR4302543.2468345/94‑1 (MQ=60)

   CGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCG                                                                                            <  SRR4302543.4730673/94‑1 (MQ=60)

   CGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCG                                                                                            >  SRR4302543.866982/1‑94 (MQ=60)

    GGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGC                                                                                           >  SRR4302543.6151764/1‑94 (MQ=60)

     GACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCT                                                                                          <  SRR4302543.7255493/94‑1 (MQ=60)

     GACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCT                                                                                          >  SRR4302543.264164/1‑94 (MQ=60)

     GACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCT                                                                                          >  SRR4302543.4386084/1‑94 (MQ=60)

     GACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCT                                                                                          >  SRR4302543.56331/1‑94 (MQ=60)

     GACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCT                                                                                          >  SRR4302543.2979320/1‑94 (MQ=60)

     GACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCT                                                                                          >  SRR4302543.3012764/1‑94 (MQ=60)

     GACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCT                                                                                          >  SRR4302543.7777956/1‑94 (MQ=60)

     GACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCT                                                                                          >  SRR4302543.646282/1‑94 (MQ=60)

      aaggtaagtactagcCTGTAGCACAAATTCGTCGGGATCAGGTTGAAGATTAGTCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTG                                                                                         <  SRR4302543.1121938/79‑1 (MQ=60)

      ACAGCAAGTACTACGCTGTAGCACAATTTCAGCGCGATCAGTTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTG                                                                                         <  SRR4302543.1046447/94‑1 (MQ=60)

      ACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTG                                                                                         <  SRR4302543.7370344/94‑1 (MQ=60)

      ACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTG                                                                                         >  SRR4302543.2152925/1‑94 (MQ=60)

       CAGCAAGTCCTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGG                                                                                        <  SRR4302543.37094/94‑1 (MQ=60)

       CAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGG                                                                                        >  SRR4302543.5594747/1‑94 (MQ=60)

       CAGAAAGTCCTCCGCTGTAGCACAAATTCAGCGCGATCAGTTGGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGG                                                                                        <  SRR4302543.3112507/94‑1 (MQ=60)

       AAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGG                                                                                        <  SRR4302543.6262446/94‑1 (MQ=60)

        agcaagtgccaggctgtccgacaagtgcagggagagaAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGC                                                                                       <  SRR4302543.1276245/57‑1 (MQ=60)

        AGCAAGTACTAGGCTGTAGCACAAATTCGGCGCAGTCAGTTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGC                                                                                       <  SRR4302543.1085725/94‑1 (MQ=60)

        AGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGC                                                                                       >  SRR4302543.7819498/1‑94 (MQ=60)

        AGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGC                                                                                       >  SRR4302543.843523/1‑94 (MQ=60)

        AGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGC                                                                                       >  SRR4302543.6914335/1‑94 (MQ=60)

         GCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCT                                                                                      >  SRR4302543.7550724/1‑94 (MQ=60)

          CAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTG                                                                                     >  SRR4302543.4101798/1‑94 (MQ=60)

           AAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGG                                                                                    <  SRR4302543.7949876/94‑1 (MQ=60)

           AAGTACTACGCTGTAGCAAAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGG                                                                                    <  SRR4302543.254453/94‑1 (MQ=60)

            agttctacggtgtagaacaaattcggcggaagcaggtagaaaattagcCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGC                                                                                   <  SRR4302543.539961/46‑1 (MQ=60)

            AGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGC                                                                                   >  SRR4302543.6479597/1‑94 (MQ=60)

            AGTACAACGCTGTAGCACAAATGCAGCGCGATCAGGTCGAAGATTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGC                                                                                   <  SRR4302543.5414073/94‑1 (MQ=60)

             GTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCA                                                                                  >  SRR4302543.7353980/1‑94 (MQ=60)

             GTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCA                                                                                  >  SRR4302543.7483701/1‑94 (MQ=60)

             GTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTGGAAGATTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCA                                                                                  <  SRR4302543.745738/94‑1 (MQ=60)

             ATACTACGCTGTAGCCCAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCA                                                                                  <  SRR4302543.4983783/94‑1 (MQ=60)

              TACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCAC                                                                                 >  SRR4302543.7733761/1‑94 (MQ=60)

               CCTACGCTGTAGCACAAATTAAGCGCGATAAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACC                                                                                <  SRR4302543.7295478/94‑1 (MQ=60)

                CTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCG                                                                               >  SRR4302543.7804228/1‑94 (MQ=60)

                 TACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGA                                                                              <  SRR4302543.5820652/94‑1 (MQ=60)

                    GCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATC                                                                           >  SRR4302543.7007536/1‑94 (MQ=60)

                     cggtggccaaaattaaccgcgatcagttggaagatattcCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGGTGGCACCGAATCT                                                                          <  SRR4302543.3670758/55‑1 (MQ=60)

                     CTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCT                                                                          <  SRR4302543.1197306/94‑1 (MQ=60)

                     CTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCT                                                                          >  SRR4302543.7751983/1‑94 (MQ=60)

                     CTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCT                                                                          >  SRR4302543.7796943/1‑94 (MQ=60)

                     CTGTAGCACAAATTCAGCGCGATCAGGTGGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCT                                                                          <  SRR4302543.6249108/94‑1 (MQ=60)

                     CTGTAGCACAAATCCAGCGCGATCAGGTGAAAGATTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCT                                                                          <  SRR4302543.101383/94‑1 (MQ=60)

                      TGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTG                                                                         >  SRR4302543.7961905/1‑94 (MQ=60)

                      TCTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTG                                                                         <  SRR4302543.2022659/94‑1 (MQ=60)

                       GTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGCCTGG‑ACCGAATCGGGG                                                                       >  SRR4302543.1958516/1‑94 (MQ=60)

                         AGCACAAATGCGGCGCGATCGGGTGGAAGTGTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGG                                                                      <  SRR4302543.3928372/94‑1 (MQ=60)

                          GCAAAAATTCAGCGCGATCAGGTTGAAGTTTACGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGT                                                                     <  SRR4302543.6397644/94‑1 (MQ=60)

                          ACACAAATTCGGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGT                                                                     <  SRR4302543.6397642/94‑1 (MQ=60)

                           CACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTA                                                                    >  SRR4302543.6571332/1‑94 (MQ=60)

                            ACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTAT                                                                   <  SRR4302543.2755985/94‑1 (MQ=60)

                            ACAAATTCAGCGCGATCAGGTTAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTAT                                                                   <  SRR4302543.41884/94‑1 (MQ=60)

                            AAAAATTCAGCGCGATCAGTTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTAT                                                                   <  SRR4302543.2782369/94‑1 (MQ=60)

                              aaattcgcggcaatgaggtagaagatatTGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGA                                                                 <  SRR4302543.5126213/66‑1 (MQ=60)

                              AAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGA                                                                 >  SRR4302543.7973376/1‑94 (MQ=60)

                              AAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGA                                                                 >  SRR4302543.3072371/1‑94 (MQ=60)

                              AAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGA                                                                 >  SRR4302543.1246937/1‑94 (MQ=60)

                               aatcgagcgaGATCAGTTTGAAGTTTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAC                                                                <  SRR4302543.1769726/84‑1 (MQ=60)

                               AATTCAGCGCGGTCAGGTTGAAAATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAC                                                                <  SRR4302543.415534/94‑1 (MQ=60)

                               AATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAC                                                                >  SRR4302543.4966934/1‑94 (MQ=60)

                               AATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAC                                                                <  SRR4302543.4312689/94‑1 (MQ=60)

                                ATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACG                                                               >  SRR4302543.5829094/1‑94 (MQ=60)

                                ATTCAGCGCGATAAGGTGGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACG                                                               <  SRR4302543.5320286/94‑1 (MQ=60)

                                  TCCGCGCGGTAAGGTTAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCG                                                             <  SRR4302543.5925694/94‑1 (MQ=60)

                                  TCAGCGCGATCAGTTGAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCG                                                             <  SRR4302543.3890913/94‑1 (MQ=60)

                                  TCAGCGCGATCAGGTGGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCG                                                             <  SRR4302543.2363121/94‑1 (MQ=60)

                                  TCAGCGAGATCAGGTTAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCG                                                             <  SRR4302543.3288225/94‑1 (MQ=60)

                                      CGTGATCAGGTTGAACATTGCGCCCGCCGTAAATGTATGAGCGTTACCGAAGTTGGTCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACT                                                         <  SRR4302543.2507375/94‑1 (MQ=60)

                                      CGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACT                                                         >  SRR4302543.3579378/1‑94 (MQ=60)

                                      CGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACT                                                         >  SRR4302543.3579379/1‑94 (MQ=60)

                                       GCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTG                                                        >  SRR4302543.4050187/1‑94 (MQ=60)

                                       GCGATCAAGTTGAAGAATAAGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGTCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTG                                                        <  SRR4302543.7879579/94‑1 (MQ=60)

                                        CGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGA                                                       >  SRR4302543.903412/1‑94 (MQ=60)

                                         gatggGGTTGAATATTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAT                                                      <  SRR4302543.132830/89‑1 (MQ=60)

                                         GATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAT                                                      >  SRR4302543.2642498/1‑94 (MQ=60)

                                         GATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAT                                                      >  SRR4302543.791788/1‑94 (MQ=60)

                                         GATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAT                                                      >  SRR4302543.1840278/1‑94 (MQ=60)

                                         GATCAGGTTGAAGATTATGCCCGCCGTAAAGGGATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAT                                                      >  SRR4302543.2398983/1‑94 (MQ=60)

                                          ATCGGGTTGAAGTTTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATT                                                     <  SRR4302543.1589450/94‑1 (MQ=60)

                                          ATCAGTTTGAAGATTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATT                                                     <  SRR4302543.7498910/94‑1 (MQ=60)

                                           TCGGGTGGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTC                                                    <  SRR4302543.2099666/94‑1 (MQ=60)

                                           TCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTC                                                    >  SRR4302543.4590141/1‑94 (MQ=60)

                                            GAGGTTGAAGTTTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCA                                                   <  SRR4302543.7837910/94‑1 (MQ=60)

                                            CAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCA                                                   >  SRR4302543.7214603/1‑94 (MQ=60)

                                             AGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCAC                                                  >  SRR4302543.7833959/1‑94 (MQ=60)

                                             AGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCAC                                                  >  SRR4302543.2713581/1‑94 (MQ=60)

                                             AGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCAC                                                  >  SRR4302543.7926535/1‑94 (MQ=60)

                                              GGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACA                                                 >  SRR4302543.1265810/1‑94 (MQ=60)

                                              GGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCGGGCACCGAATCTGGGGCATGACGCGGACTGATTCACA                                                 >  SRR4302543.884606/1‑94 (MQ=60)

                                                 TGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAAT                                              >  SRR4302543.3878289/1‑94 (MQ=60)

                                                 TGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAAT                                              <  SRR4302543.7573109/94‑1 (MQ=60)

                                                 TGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAAT                                              >  SRR4302543.2480268/1‑94 (MQ=60)

                                                 TGAAGATTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAAT                                              <  SRR4302543.4507918/94‑1 (MQ=60)

                                                  GAAGATTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATC                                             <  SRR4302543.4666836/94‑1 (MQ=60)

                                                   AATATTCTGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCT                                            <  SRR4302543.5743607/94‑1 (MQ=60)

                                                   AAGATTCTCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCT                                            <  SRR4302543.3974006/94‑1 (MQ=60)

                                                    AGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTG                                           >  SRR4302543.7017322/1‑94 (MQ=60)

                                                     atttatcCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGT                                          <  SRR4302543.5786321/87‑1 (MQ=60)

                                                     GTTTAGGCCCGCCGTAAAGATATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGT                                          <  SRR4302543.865052/94‑1 (MQ=60)

                                                     GATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGT                                          >  SRR4302543.4319330/1‑94 (MQ=60)

                                                      ATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTC                                         >  SRR4302543.2323487/1‑94 (MQ=60)

                                                      ATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTC                                         <  SRR4302543.5232674/94‑1 (MQ=60)

                                                      ATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTA                                         >  SRR4302543.6628709/1‑94 (MQ=60)

                                                       TTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCA                                        >  SRR4302543.5617436/1‑94 (MQ=60)

                                                       TTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCA                                        >  SRR4302543.3705697/1‑94 (MQ=60)

                                                       TTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCA                                        <  SRR4302543.6691088/94‑1 (MQ=60)

                                                        TATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCAC                                       >  SRR4302543.47079/1‑94 (MQ=60)

                                                         ATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGACTCACAAATCTGTCACT                                      >  SRR4302543.7548265/1‑94 (MQ=60)

                                                          TGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTT                                     >  SRR4302543.5807164/1‑94 (MQ=60)

                                                            CCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTT                                   <  SRR4302543.1978355/94‑1 (MQ=60)

                                                              CGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCC                                 >  SRR4302543.1262584/1‑94 (MQ=60)

                                                               GCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCT                                <  SRR4302543.923911/94‑1 (MQ=60)

                                                               GCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCT                                <  SRR4302543.1452286/94‑1 (MQ=60)

                                                                CCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT                               <  SRR4302543.7537082/94‑1 (MQ=60)

                                                                CCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT                               >  SRR4302543.4722488/1‑94 (MQ=60)

                                                                 CGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTA                              >  SRR4302543.827442/1‑94 (MQ=60)

                                                                 CGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTA                              <  SRR4302543.7802853/94‑1 (MQ=60)

                                                                  GTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCCCCGCATCTAGGGGATGCCGCGGACTGATTCCCAAATCTGcaccttttccttaa                             >  SRR4302543.4598864/1‑80 (MQ=51)

                                                                  GTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAC                             >  SRR4302543.1411738/1‑94 (MQ=60)

                                                                  GTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAC                             <  SRR4302543.8000846/94‑1 (MQ=60)

                                                                  GTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAC                             <  SRR4302543.2557120/94‑1 (MQ=60)

                                                                  GTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAC                             >  SRR4302543.7812176/1‑94 (MQ=60)

                                                                  GTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAC                             >  SRR4302543.6908302/1‑94 (MQ=60)

                                                                  GTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAC                             >  SRR4302543.7285350/1‑94 (MQ=60)

                                                                  GTAAAGATATGAGCGTTACCTAAGTTGGGCGATGGCTGGTACTGAATCGGTGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAC                             <  SRR4302543.6772605/94‑1 (MQ=60)

                                                                   TAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACA                            >  SRR4302543.6308498/1‑94 (MQ=60)

                                                                   TAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACA                            >  SRR4302543.1188231/1‑94 (MQ=60)

                                                                   TAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACA                            <  SRR4302543.6606310/94‑1 (MQ=60)

                                                                    AAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAA                           <  SRR4302543.3879034/94‑1 (MQ=60)

                                                                    AAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAA                           >  SRR4302543.1533620/1‑94 (MQ=60)

                                                                      AGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACA                         <  SRR4302543.3867704/94‑1 (MQ=60)

                                                                      AGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACA                         >  SRR4302543.3930408/1‑94 (MQ=60)

                                                                       GGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGCATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAA                        >  SRR4302543.6281377/1‑94 (MQ=60)

                                                                        GTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACACATCTGTCACTTTTCCTTACAACGAA                       >  SRR4302543.7286957/1‑94 (MQ=60)

                                                                        GTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAA                       >  SRR4302543.7286955/1‑94 (MQ=60)

                                                                        GTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAA                       <  SRR4302543.2797598/94‑1 (MQ=60)

                                                                         TATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAAC                      >  SRR4302543.7923189/1‑94 (MQ=60)

                                                                         TATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAAC                      >  SRR4302543.7396699/1‑94 (MQ=60)

                                                                         TATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAAC                      <  SRR4302543.5195335/94‑1 (MQ=60)

                                                                         TATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAAC                      <  SRR4302543.4155694/94‑1 (MQ=60)

                                                                         TATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAAC                      <  SRR4302543.4155692/94‑1 (MQ=60)

                                                                          ATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACA                     >  SRR4302543.3378668/1‑94 (MQ=60)

                                                                          ATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACA                     <  SRR4302543.1999467/94‑1 (MQ=60)

                                                                          ATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACA                     >  SRR4302543.5779875/1‑94 (MQ=60)

                                                                          ATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACA                     <  SRR4302543.2983912/94‑1 (MQ=60)

                                                                            GAGCGTTTCCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGG                   <  SRR4302543.2200141/94‑1 (MQ=60)

                                                                            GAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGG                   <  SRR4302543.6953716/94‑1 (MQ=60)

                                                                            GAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGG                   <  SRR4302543.4406121/94‑1 (MQ=60)

                                                                             AGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGG                  >  SRR4302543.6248182/1‑94 (MQ=60)

                                                                              GCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGC                 <  SRR4302543.2766987/94‑1 (MQ=60)

                                                                                GTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGTGCGC               >  SRR4302543.7067679/1‑94 (MQ=60)

                                                                                GTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGC               >  SRR4302543.3322045/1‑94 (MQ=60)

                                                                                GTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGC               >  SRR4302543.2256453/1‑94 (MQ=60)

                                                                                GTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGC               >  SRR4302543.4326277/1‑94 (MQ=60)

                                                                                 TTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCT              <  SRR4302543.7479698/94‑1 (MQ=60)

                                                                                  TACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTC             >  SRR4302543.511638/1‑94 (MQ=60)

                                                                                    CCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAA           >  SRR4302543.2783418/1‑94 (MQ=60)

                                                                                    CCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAA           >  SRR4302543.2312414/1‑94 (MQ=60)

                                                                                     CGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAAT          <  SRR4302543.2874788/94‑1 (MQ=60)

                                                                                      GAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATG         <  SRR4302543.1413052/94‑1 (MQ=60)

                                                                                      GAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATG         <  SRR4302543.4814162/94‑1 (MQ=60)

                                                                                      GAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATG         <  SRR4302543.5054662/94‑1 (MQ=60)

                                                                                       AAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGA        >  SRR4302543.4884785/1‑94 (MQ=60)

                                                                                        AGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAG       <  SRR4302543.7463661/94‑1 (MQ=60)

                                                                                        AGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAG       <  SRR4302543.4708181/94‑1 (MQ=60)

                                                                                        AGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGCGCGCTCAATGAG       >  SRR4302543.6349663/1‑94 (MQ=60)

                                                                                         GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGC      >  SRR4302543.2780753/1‑94 (MQ=60)

                                                                                         GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGC      <  SRR4302543.5224673/94‑1 (MQ=60)

                                                                                         GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGC      >  SRR4302543.3348754/1‑94 (MQ=60)

                                                                                         GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGC      <  SRR4302543.4999566/94‑1 (MQ=60)

                                                                                          TTGGGCGCTGGGTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCG     <  SRR4302543.216194/94‑1 (MQ=60)

                                                                                          TTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCG     <  SRR4302543.7203464/94‑1 (MQ=60)

                                                                                             GGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCC  <  SRR4302543.618678/94‑1 (MQ=60)

ACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCC  >  NC_000913/4224957‑4225143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`