Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,261,143 |
T→C |
E223G (GAA→GGA) |
qor ← |
quinone oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,261,143 | 0 | T | C | 100.0%
| 671.0
/ NA
| 217 | E223G (GAA→GGA) | qor | quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/108); total (109/108) |
Only 100 of 229 total aligned reads displayed.
TGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCA > NC_000913/4261051‑4261232
|
tgaGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGtt > 1:1716822/1‑93 (MQ=255)
agaATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTccc < 1:2234743/93‑1 (MQ=255)
gaATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTcccc > 1:602046/1‑93 (MQ=255)
gaATGCCTAAGTGCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTcccc < 1:2305817/93‑1 (MQ=255)
aaTGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCa < 1:4207853/93‑1 (MQ=255)
aTGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAg > 1:3101282/1‑93 (MQ=255)
aTGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAg < 2:4463872/93‑1 (MQ=255)
tGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAgg < 2:190391/93‑1 (MQ=255)
tGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAgg > 2:2827248/1‑93 (MQ=255)
tGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAgg > 1:408467/1‑93 (MQ=255)
gCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGgt < 2:3296509/93‑1 (MQ=255)
gCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGgt < 2:2598850/93‑1 (MQ=255)
cTAAGTTCACACCGGTAACCGCGCCTGATGAGGTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCACgtgt > 2:4064155/1‑93 (MQ=255)
tAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtc > 2:1558293/1‑93 (MQ=255)
tAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtc < 2:4153545/93‑1 (MQ=255)
aaGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtct > 2:1786804/1‑93 (MQ=255)
tCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGc < 2:1253771/93‑1 (MQ=255)
cacaCCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGcc < 1:205923/93‑1 (MQ=255)
acacCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGccc > 2:2040581/1‑93 (MQ=255)
acacCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGccc > 2:2280726/1‑93 (MQ=255)
cacCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCa > 2:1708776/1‑93 (MQ=255)
cccGGTACCCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCAc < 2:2560876/92‑1 (MQ=255)
acCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCAc > 1:1296378/1‑93 (MQ=255)
cGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACgg > 1:662146/1‑93 (MQ=255)
ggTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGa > 1:2966248/1‑93 (MQ=255)
ggTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGa > 2:1279003/1‑93 (MQ=255)
aaCCGCACCTGATGTGTTGCCACAACTCACCCTTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATc < 1:4341033/93‑1 (MQ=255)
aaCCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATc > 1:3237369/1‑93 (MQ=255)
aCCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCg > 1:1007493/1‑93 (MQ=255)
gCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTac < 1:2682718/93‑1 (MQ=255)
cACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTaca < 1:4184526/93‑1 (MQ=255)
cACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTaca < 2:2945628/93‑1 (MQ=255)
cACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTaca < 2:4347051/93‑1 (MQ=255)
ccTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacc > 2:2771018/1‑93 (MQ=255)
tgatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcaccac > 2:1874712/1‑93 (MQ=255)
gatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcg > 2:3512169/1‑93 (MQ=255)
gatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcg > 2:2116544/1‑93 (MQ=255)
atgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcgc < 1:4104113/93‑1 (MQ=255)
tgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcgcg > 1:4656766/1‑93 (MQ=255)
gaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCCCgcgc > 1:1536125/1‑93 (MQ=255)
gaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACgcgc > 2:4644544/1‑93 (MQ=255)
gaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACgcgc > 2:4622747/1‑93 (MQ=255)
gaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACgcgc > 1:2819810/1‑93 (MQ=255)
gaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACgcgc < 2:4273410/93‑1 (MQ=255)
gTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGGGTCTCTGCCCACGGAATCGTACACCACGCGCAc > 1:3808189/1‑93 (MQ=255)
ttGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACt > 1:94416/1‑93 (MQ=255)
tGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACtt < 1:2160004/93‑1 (MQ=255)
gCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACttt > 2:270739/1‑93 (MQ=255)
gCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACttt < 2:538783/93‑1 (MQ=255)
cAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGTAATCGTACACCACGCGCACTTTCt < 1:4540371/93‑1 (MQ=255)
aaaaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCtt < 1:3348023/93‑1 (MQ=255)
aaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAc > 1:1503734/1‑93 (MQ=255)
aaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAc < 2:2205011/93‑1 (MQ=255)
tGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAccgc > 2:116124/1‑93 (MQ=255)
aCCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAccgccg > 2:1037472/1‑93 (MQ=255)
ccATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCgg > 2:3029145/1‑93 (MQ=255)
ttAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGa > 2:3712336/1‑93 (MQ=255)
tAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAt < 1:1286060/93‑1 (MQ=255)
tAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAt < 1:3575508/93‑1 (MQ=255)
aaGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtc < 2:827501/93‑1 (MQ=255)
aGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtct < 1:77718/93‑1 (MQ=255)
aGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtct < 1:876914/93‑1 (MQ=255)
gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtctc < 2:1145734/93‑1 (MQ=255)
gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtctc > 1:3600637/1‑93 (MQ=255)
ccGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATctct < 1:3631561/93‑1 (MQ=255)
cgcgGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtt < 2:870083/93‑1 (MQ=255)
gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCttt < 2:2467656/93‑1 (MQ=255)
gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCttt > 1:3945860/1‑93 (MQ=255)
cggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtttt > 1:2743446/1‑93 (MQ=255)
cggcgTTGCAGGCAATACAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtttt < 1:4254342/93‑1 (MQ=255)
gcgTTGCAGGCAATCCAGCGACCTTCCCCAGGTGACTCTGCCCACGGAATCGTCCACCACGCTCACTTTCTTGCCGCCGGCGATCTCTTTTaa < 2:789271/93‑1 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAc < 2:207897/93‑1 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAc < 1:1400078/93‑1 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAc > 2:3170226/1‑93 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAc < 1:4355714/93‑1 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACCTTCTTACCGCCGGCGATCTCTTTTAAc > 1:2049223/1‑93 (MQ=255)
gTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAcc > 2:585672/1‑93 (MQ=255)
cAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTc < 1:4077112/93‑1 (MQ=255)
ggCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGa > 1:3463922/1‑93 (MQ=255)
gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAc < 1:4462095/93‑1 (MQ=255)
gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAc < 1:249926/93‑1 (MQ=255)
cAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAcc < 2:4160818/93‑1 (MQ=255)
aaTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCa > 1:2598484/1‑93 (MQ=255)
aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAg > 2:1421651/1‑93 (MQ=255)
tCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGa < 1:1645845/93‑1 (MQ=255)
ccAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGAt < 1:3168900/93‑1 (MQ=255)
cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATc < 1:3764896/93‑1 (MQ=255)
cgCGACCATCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATcc < 2:1606462/92‑1 (MQ=255)
aGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATca > 2:2423991/1‑92 (MQ=255)
gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCct < 1:3016858/93‑1 (MQ=255)
gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCct > 2:4008703/1‑93 (MQ=255)
gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCct < 2:3729352/93‑1 (MQ=255)
gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCct > 2:1111457/1‑93 (MQ=255)
gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCct < 2:1424212/93‑1 (MQ=255)
gACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCctct < 2:3461043/93‑1 (MQ=255)
aCCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCtt > 1:1952020/1‑93 (MQ=255)
aCCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCtt > 2:3119601/1‑93 (MQ=255)
cGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCa < 2:692643/93‑1 (MQ=255)
cGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCa > 2:1483213/1‑93 (MQ=255)
cGTCCCCAGGTGGCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCa < 2:2378591/93‑1 (MQ=255)
|
TGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCA > NC_000913/4261051‑4261232
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT > NC_000913/4261050‑4261236
|
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTT > SRR4302535.1729244/1‑94 (MQ=60)
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTC < SRR4302535.1404630/94‑1 (MQ=60)
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTC > SRR4302535.2452364/1‑94 (MQ=60)
TGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCC > SRR4302535.3528979/1‑94 (MQ=60)
GAGAATGCCTAAGTTCACACCGGTAAGCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCC < SRR4302535.1968219/94‑1 (MQ=60)
GAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCC < SRR4302535.3784251/94‑1 (MQ=60)
AGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCC < SRR4302535.2250640/94‑1 (MQ=60)
AGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCC > SRR4302535.606256/1‑94 (MQ=60)
GAATGCCTAAGTGCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCA < SRR4302535.2322310/94‑1 (MQ=60)
AATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAG > SRR4302535.3122871/1‑94 (MQ=60)
AATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAG < SRR4302535.3049470/94‑1 (MQ=60)
AATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAG < SRR4302535.4236648/94‑1 (MQ=60)
ATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGG > SRR4302535.1523723/1‑94 (MQ=60)
ATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGG > SRR4302535.411332/1‑94 (MQ=60)
TGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGT > SRR4302535.4650593/1‑94 (MQ=60)
TCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTG < SRR4302535.2790041/94‑1 (MQ=60)
CCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGT > SRR4302535.1701840/1‑94 (MQ=60)
AGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCT < SRR4302535.98324/94‑1 (MQ=60)
CACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCC < SRR4302535.207336/94‑1 (MQ=60)
CACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCC > SRR4302535.4255467/1‑94 (MQ=60)
CACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCAC > SRR4302535.1305625/1‑94 (MQ=60)
CACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCAC < SRR4302535.759940/94‑1 (MQ=60)
CCCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACG < SRR4302535.4648765/94‑1 (MQ=60)
CCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGG > SRR4302535.2888939/1‑94 (MQ=60)
CCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGG > SRR4302535.666766/1‑94 (MQ=60)
CGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGA > SRR4302535.2987059/1‑94 (MQ=60)
CGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGA > SRR4302535.3619103/1‑94 (MQ=60)
TAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATC < SRR4302535.176299/94‑1 (MQ=60)
TAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATC > SRR4302535.3259843/1‑94 (MQ=60)
TAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATC < SRR4302535.3390058/94‑1 (MQ=60)
AACCGCACCTGATGTGTTGCCACAACTCACCCTTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCG < SRR4302535.4370725/94‑1 (MQ=60)
AACCGCACCTGATGAGTTGCCATAGCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCG < SRR4302535.3483547/94‑1 (MQ=60)
AACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCG > SRR4302535.1014652/1‑94 (MQ=60)
AACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCG < SRR4302535.4329852/94‑1 (MQ=60)
ACAGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGT > SRR4302535.1296280/1‑94 (MQ=60)
CGCACCTGATGAGTTGCCAAAANTGNCCATTAAGCCGCGGCGTTGNAGGCANTCNAGCGACCGNCCCCAGNNNTNTCTGCNCNCGNANNNGNAC > SRR4302535.861471/1‑94 (MQ=60)
CGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAC < SRR4302535.216109/94‑1 (MQ=60)
GCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACA < SRR4302535.2701906/94‑1 (MQ=60)
CACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACAC < SRR4302535.4213156/94‑1 (MQ=60)
CCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCA > SRR4302535.2064951/1‑94 (MQ=60)
CCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCA > SRR4302535.4544786/1‑94 (MQ=60)
CTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAC < SRR4302535.377148/94‑1 (MQ=60)
CTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAC < SRR4302535.2522583/94‑1 (MQ=60)
TGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACG > SRR4302535.1175140/1‑94 (MQ=60)
TGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACG > SRR4302535.2992470/1‑94 (MQ=60)
ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG < SRR4302535.4132209/94‑1 (MQ=60)
ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG > SRR4302535.4688276/1‑94 (MQ=60)
ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG > SRR4302535.1484382/1‑94 (MQ=60)
ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG < SRR4302535.447796/94‑1 (MQ=60)
TGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCCCGCGC > SRR4302535.1547192/1‑94 (MQ=60)
TGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGC > SRR4302535.2839837/1‑94 (MQ=60)
AGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCAC < SRR4302535.4328154/94‑1 (MQ=60)
AGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGGGTCTCTGCCCACGGAATCGTACACCACGCGCAC > SRR4302535.3834458/1‑94 (MQ=60)
GTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACT < SRR4302535.4384603/94‑1 (MQ=60)
GTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACT > SRR4302535.95090/1‑94 (MQ=60)
GTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACT < SRR4302535.2020109/94‑1 (MQ=60)
TGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTT > SRR4302535.4168234/1‑94 (MQ=60)
TGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTT < SRR4302535.2175516/94‑1 (MQ=60)
GCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGCCTCTGCCCACGGAATCGTACACCACGCGCACTTTC > SRR4302535.407042/1‑94 (MQ=60)
CCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCT < SRR4302535.2205775/94‑1 (MQ=60)
CAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGTAATCGTACACCACGCGCACTTTCTT < SRR4302535.4571425/94‑1 (MQ=60)
CAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTT < SRR4302535.3825133/94‑1 (MQ=60)
AAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTA < SRR4302535.3371346/94‑1 (MQ=60)
AAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAC > SRR4302535.3648456/1‑94 (MQ=60)
AAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAC > SRR4302535.3648457/1‑94 (MQ=60)
AAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAC > SRR4302535.1514551/1‑94 (MQ=60)
AACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACC < SRR4302535.3140247/94‑1 (MQ=60)
CTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGC > SRR4302535.411220/1‑94 (MQ=60)
TGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCC < SRR4302535.3238734/94‑1 (MQ=60)
ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGA > SRR4302535.4023613/1‑94 (MQ=60)
ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGA > SRR4302535.4206108/1‑94 (MQ=60)
TAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATC < SRR4302535.3600295/94‑1 (MQ=60)
TAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATC < SRR4302535.1295227/94‑1 (MQ=60)
AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC > SRR4302535.3625622/1‑94 (MQ=60)
AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC < SRR4302535.78273/94‑1 (MQ=60)
AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC < SRR4302535.883123/94‑1 (MQ=60)
GCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCT < SRR4302535.2075654/94‑1 (MQ=60)
GCCGCGGCGTTGCAGGCAAGCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCT < SRR4302535.1707139/94‑1 (MQ=60)
CCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTT < SRR4302535.3656735/94‑1 (MQ=60)
CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTT > SRR4302535.3972806/1‑94 (MQ=60)
GCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTT > SRR4302535.2762999/1‑94 (MQ=60)
CGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACACCGCGCACTTTTTTACCGCGGGCGCTCTCTTTTA > SRR4302535.923399/1‑94 (MQ=60)
CGGCGTTGCAGGCAATACAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTA < SRR4302535.4283489/94‑1 (MQ=60)
GCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAC < SRR4302535.2327253/94‑1 (MQ=60)
GCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACCTTCTTACCGCCGGCGATCTCTTTTAAC > SRR4302535.2063978/1‑94 (MQ=60)
CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACC < SRR4302535.1410074/94‑1 (MQ=60)
CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACC < SRR4302535.4385529/94‑1 (MQ=60)
GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCG < SRR4302535.1576818/94‑1 (MQ=60)
TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCT < SRR4302535.3364606/94‑1 (MQ=60)
TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCT < SRR4302535.2476682/94‑1 (MQ=60)
GAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCG < SRR4302535.1431208/94‑1 (MQ=60)
CAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCG < SRR4302535.4105010/94‑1 (MQ=60)
AGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACTGCTCGA > SRR4302535.3502507/1‑94 (MQ=60)
AGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGA > SRR4302535.3487998/1‑94 (MQ=60)
GGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAC > SRR4302535.2257707/1‑94 (MQ=60)
GGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAC < SRR4302535.2628050/94‑1 (MQ=60)
GGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAC > SRR4302535.1332099/1‑94 (MQ=60)
GCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACC < SRR4302535.3463822/94‑1 (MQ=60)
GCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACC < SRR4302535.4492698/94‑1 (MQ=60)
GCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACC < SRR4302535.251646/94‑1 (MQ=60)
CAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCA > SRR4302535.3902581/1‑94 (MQ=60)
CAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCA > SRR4302535.2617145/1‑94 (MQ=60)
AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAT > SRR4302535.2835655/1‑94 (MQ=60)
ATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGA > SRR4302535.705446/1‑94 (MQ=60)
TCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGAT < SRR4302535.1657737/94‑1 (MQ=60)
CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATC < SRR4302535.3190851/94‑1 (MQ=60)
CAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCC < SRR4302535.3045387/94‑1 (MQ=60)
CAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCC < SRR4302535.3790901/94‑1 (MQ=60)
AGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCT > SRR4302535.4114205/1‑94 (MQ=60)
AGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCT > SRR4302535.663062/1‑94 (MQ=60)
GCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTC < SRR4302535.3037994/94‑1 (MQ=60)
GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTT > SRR4302535.491175/1‑94 (MQ=60)
GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTT > SRR4302535.2716402/1‑94 (MQ=60)
GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTT > SRR4302535.1966068/1‑94 (MQ=60)
GACCGTCCCCAGCTGTCTCTGCCCACGGAATCGTACACCACGCGCGCTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTT < SRR4302535.4228529/94‑1 (MQ=60)
ACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTC > SRR4302535.807401/1‑94 (MQ=60)
GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG > SRR4302535.189994/1‑94 (MQ=60)
GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG < SRR4302535.1056296/94‑1 (MQ=60)
CCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT < SRR4302535.2160297/94‑1 (MQ=60)
|
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT > NC_000913/4261050‑4261236
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
