Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,261,198 T→C T205A (ACC→GCC)  qor ← quinone oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,261,1980TC99.4% 1081.3 / ‑3.9 348T205A (ACC→GCC) qorquinone oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (193/153);  total (194/154)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.27e-01

Only 100 of 356 total aligned reads displayed.

TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG  >  NC_000913/4261108‑4261287
                                                                                          |                                                                                         
ttAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGa                                                                                         >  1:3616173/1‑93 (MQ=255)
 tAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAt                                                                                        <  1:5938555/93‑1 (MQ=255)
  aaGCCGCGGCGTTGCAGGCAATCCAGCGTCCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtc                                                                                       <  1:3352156/93‑1 (MQ=255)
    gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtctc                                                                                     >  1:2741240/1‑93 (MQ=255)
    gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtctc                                                                                     >  1:1044358/1‑93 (MQ=255)
    gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtctc                                                                                     <  2:6175492/93‑1 (MQ=255)
      cgcgGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtt                                                                                   <  2:1286981/93‑1 (MQ=255)
      cgcgGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtt                                                                                   >  2:7287101/1‑93 (MQ=255)
       gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTTCCGCCGGCGATCTCttt                                                                                  <  2:2149361/93‑1 (MQ=255)
       gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCttt                                                                                  <  1:4383739/93‑1 (MQ=255)
       gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCttt                                                                                  >  1:7168842/1‑93 (MQ=255)
        cggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtttt                                                                                 <  2:1728113/93‑1 (MQ=255)
        cggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtttt                                                                                 <  1:6698257/93‑1 (MQ=255)
         ggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTa                                                                                <  2:4157648/93‑1 (MQ=255)
         ggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTa                                                                                >  1:3013792/1‑93 (MQ=255)
          gcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTaa                                                                               >  1:3557820/1‑93 (MQ=255)
           cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAc                                                                              <  2:3060165/93‑1 (MQ=255)
             ttGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCg                                                                            >  2:657871/1‑93 (MQ=255)
             ttGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCg                                                                            >  2:6978528/1‑93 (MQ=255)
                 aGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCg                                                                        >  1:924865/1‑93 (MQ=255)
                   gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAc                                                                      <  1:5382130/93‑1 (MQ=255)
                     aaTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCa                                                                    >  1:2149835/1‑93 (MQ=255)
                     aaTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCa                                                                    <  1:1332195/93‑1 (MQ=255)
                      aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAg                                                                   >  2:2859264/1‑93 (MQ=255)
                      aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAg                                                                   >  2:4490964/1‑93 (MQ=255)
                       tCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGa                                                                  >  2:4688419/1‑93 (MQ=255)
                       tCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGa                                                                  >  1:1129755/1‑93 (MQ=255)
                        ccAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGAt                                                                 <  2:5882373/93‑1 (MQ=255)
                         cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATc                                                                >  2:3276006/1‑93 (MQ=255)
                         cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATc                                                                >  1:5221374/1‑93 (MQ=255)
                           gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCct                                                              >  2:4840010/1‑93 (MQ=255)
                              aCCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCtt                                                           >  2:2395595/1‑93 (MQ=255)
                               ccGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTc                                                          >  2:141276/1‑93 (MQ=255)
                                cGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCa                                                         <  2:1816423/93‑1 (MQ=255)
                                 gtccccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCAc                                                        >  1:2331605/4‑93 (MQ=255)
                                  tccccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACg                                                       >  1:1285426/3‑93 (MQ=255)
                                  tccccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACg                                                       >  1:7580904/3‑93 (MQ=255)
                                   ccccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGa                                                      >  2:6007415/2‑93 (MQ=255)
                                   ccccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGa                                                      >  1:6244122/2‑93 (MQ=255)
                                     ccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATa                                                    >  1:287237/1‑93 (MQ=255)
                                     ccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATa                                                    >  2:5016240/1‑93 (MQ=255)
                                      cAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAg                                                   <  2:3208679/93‑1 (MQ=255)
                                      cAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAg                                                   >  2:4550466/1‑93 (MQ=255)
                                      cAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAg                                                   >  1:2061716/1‑93 (MQ=255)
                                      cAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAg                                                   >  2:2458244/1‑93 (MQ=255)
                                       aGGTGTCTCTGCCCACTGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACTAGATCCTCTTCACGATAGt                                                  >  2:7017019/1‑93 (MQ=255)
                                       aGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGt                                                  <  1:1980333/93‑1 (MQ=255)
                                        ggTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGtt                                                 >  1:1755718/1‑93 (MQ=255)
                                          tgtCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaa                                               >  1:457220/1‑93 (MQ=255)
                                          tgtCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaa                                               <  1:3875283/93‑1 (MQ=255)
                                           gtCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGTCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaat                                              <  2:5297476/93‑1 (MQ=255)
                                           gtCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaat                                              <  1:3500314/93‑1 (MQ=255)
                                            tctcTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaata                                             <  1:7403713/93‑1 (MQ=255)
                                            tctcTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaata                                             <  2:5621733/93‑1 (MQ=255)
                                             gtctGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaataa                                            <  1:248369/92‑1 (MQ=255)
                                              tctGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAc                                           <  1:4430167/93‑1 (MQ=255)
                                                tGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCt                                         <  1:6780015/93‑1 (MQ=255)
                                                tGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCt                                         <  1:4827045/93‑1 (MQ=255)
                                                 gCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTg                                        <  1:6084686/93‑1 (MQ=255)
                                                   ccACGGAATCGTACACCACGCGCACTTGCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGcc                                      >  1:816507/1‑93 (MQ=255)
                                                    cACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAATCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCa                                     >  2:4032381/1‑93 (MQ=255)
                                                     aCGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAc                                    >  1:5348323/1‑93 (MQ=255)
                                                      cGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAcg                                   <  1:382633/93‑1 (MQ=255)
                                                       ggAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAcgc                                  >  1:3673248/1‑93 (MQ=255)
                                                        gAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAcgcg                                 >  1:646752/1‑93 (MQ=255)
                                                        gAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAcgcg                                 >  1:3453035/1‑93 (MQ=255)
                                                        gAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAcgcg                                 >  1:3285605/1‑93 (MQ=255)
                                                         aaTCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACgcgc                                <  2:1805180/93‑1 (MQ=255)
                                                         aaTCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACgcgc                                >  2:1171580/1‑93 (MQ=255)
                                                         aaTCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACgcgc                                >  2:4376842/1‑93 (MQ=255)
                                                           tCGTACACCCCGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTGGACCAGATCCTCTTCGCGATCGTTAATACACTGCCACGCGccg                              >  1:6954356/1‑92 (MQ=255)
                                                           tCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGccc                              <  1:5731203/93‑1 (MQ=255)
                                                           tCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGccc                              >  1:166805/1‑93 (MQ=255)
                                                             gTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGc                            >  2:3031669/1‑93 (MQ=255)
                                                              tACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCt                           >  1:4632662/1‑93 (MQ=255)
                                                              tACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCt                           >  2:2269227/1‑93 (MQ=255)
                                                                ctccacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCttt                         <  2:922997/91‑1 (MQ=255)
                                                                 accacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCtttt                        >  2:1531448/1‑93 (MQ=255)
                                                                   cacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAg                      >  1:6347175/1‑93 (MQ=255)
                                                                    acGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAgc                     >  2:514662/1‑93 (MQ=255)
                                                                       cgcACTTTCTTCCCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAgcgcg                  <  1:1565415/93‑1 (MQ=255)
                                                                       cgcACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAgcgcg                  >  1:7007150/1‑93 (MQ=255)
                                                                       cgcACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCGGCCACGCGCCCGCTTTTAgcgcg                  >  2:4298114/1‑93 (MQ=255)
                                                                        gcACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAgcgcgc                 >  2:3486424/1‑93 (MQ=255)
                                                                         cACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGct                >  1:2670782/1‑93 (MQ=255)
                                                                         cACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGct                <  2:7481886/93‑1 (MQ=255)
                                                                          aCTTTCTTACCGCCGGCGATCTCTTTTAGCCGCTCGACCAGACCCTCTGCACGATAGTTAAGAACCTGCCACGCGCCCGCTTTTAGCGCGctc               <  2:688772/93‑1 (MQ=255)
                                                                          aCTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGctc               >  1:261266/1‑93 (MQ=255)
                                                                          aCTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGctc               >  2:5495394/1‑93 (MQ=255)
                                                                           cTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGctct              >  1:7836461/1‑93 (MQ=255)
                                                                           cTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGctct              <  2:3532222/93‑1 (MQ=255)
                                                                            tttCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTg             >  1:2475673/1‑93 (MQ=255)
                                                                            tttCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTg             >  2:780223/1‑93 (MQ=255)
                                                                            tttCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTg             <  2:3685727/93‑1 (MQ=255)
                                                                                ttACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCt         >  1:4994918/1‑93 (MQ=255)
                                                                                  aCCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCttt       >  2:2001092/1‑93 (MQ=255)
                                                                                  aCCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCttt       >  2:2228931/1‑93 (MQ=255)
                                                                                   ccgccgGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCtttt      <  1:6167949/93‑1 (MQ=255)
                                                                                    cgccgGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCttttt     >  2:6102500/1‑93 (MQ=255)
                                                                                       cgGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTgcg  >  1:4919191/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG  >  NC_000913/4261108‑4261287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG  >  NC_000913/4261105‑4261287
                                                                                             |                                                                                         
CCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGC                                                                                           >  SRR4302543.5704065/1‑94 (MQ=60)
CCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGC                                                                                           >  SRR4302543.5706063/1‑94 (MQ=60)
 CATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCG                                                                                          <  SRR4302543.1747289/94‑1 (MQ=60)
 CATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCG                                                                                          >  SRR4302543.6084112/1‑94 (MQ=60)
  ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGA                                                                                         >  SRR4302543.648750/1‑94 (MQ=60)
  ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGA                                                                                         >  SRR4302543.3648053/1‑94 (MQ=60)
  ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGA                                                                                         >  SRR4302543.6185930/1‑94 (MQ=60)
  ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGA                                                                                         >  SRR4302543.2259145/1‑94 (MQ=60)
    TAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATC                                                                                       <  SRR4302543.5992890/94‑1 (MQ=60)
     AAGCCGCGGCGTTGCAGGCAATCCAGCGTCCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCT                                                                                      <  SRR4302543.3382333/94‑1 (MQ=60)
     AAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCT                                                                                      <  SRR4302543.7037241/94‑1 (MQ=60)
      AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC                                                                                     >  SRR4302543.2398126/1‑94 (MQ=60)
      AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC                                                                                     >  SRR4302543.1798114/1‑94 (MQ=60)
      AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC                                                                                     >  SRR4302543.2766172/1‑94 (MQ=60)
      AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC                                                                                     >  SRR4302543.1053673/1‑94 (MQ=60)
      AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC                                                                                     >  SRR4302543.3421010/1‑94 (MQ=60)
       GCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCT                                                                                    <  SRR4302543.3799536/94‑1 (MQ=60)
        CCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTT                                                                                   <  SRR4302543.5125146/94‑1 (MQ=60)
         CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTT                                                                                  <  SRR4302543.5428240/94‑1 (MQ=60)
         CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTT                                                                                  >  SRR4302543.7273574/1‑94 (MQ=60)
         CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTT                                                                                  >  SRR4302543.7238461/1‑94 (MQ=60)
          GCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTT                                                                                 <  SRR4302543.3563709/94‑1 (MQ=60)
          GCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTT                                                                                 <  SRR4302543.4423481/94‑1 (MQ=60)
          GCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTT                                                                                 <  SRR4302543.3563710/94‑1 (MQ=60)
           CGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTA                                                                                <  SRR4302543.6761471/94‑1 (MQ=60)
           CGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTA                                                                                >  SRR4302543.3041067/1‑94 (MQ=60)
           CGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTA                                                                                <  SRR4302543.250013/94‑1 (MQ=60)
           CGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTA                                                                                <  SRR4302543.313067/94‑1 (MQ=60)
           CGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTA                                                                                <  SRR4302543.250012/94‑1 (MQ=60)
            GGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAA                                                                               >  SRR4302543.2832160/1‑94 (MQ=60)
            GGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAA                                                                               >  SRR4302543.3589338/1‑94 (MQ=60)
              CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTCCCGCCGGCGATCTCTTTTAACC                                                                             <  SRR4302543.1327055/94‑1 (MQ=60)
              CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACC                                                                             <  SRR4302543.4890118/94‑1 (MQ=60)
              CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACC                                                                             <  SRR4302543.4649001/94‑1 (MQ=60)
              CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACC                                                                             <  SRR4302543.1327054/94‑1 (MQ=60)
               GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCG                                                                            >  SRR4302543.7385592/1‑94 (MQ=60)
               GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCG                                                                            <  SRR4302543.3655524/94‑1 (MQ=60)
               GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCG                                                                            >  SRR4302543.7969675/1‑94 (MQ=60)
               GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCACACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCG                                                                            <  SRR4302543.3000124/94‑1 (MQ=60)
                TTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGC                                                                           >  SRR4302543.5526503/1‑94 (MQ=60)
                 TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCT                                                                          <  SRR4302543.6353111/94‑1 (MQ=60)
                 TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCT                                                                          >  SRR4302543.6805744/1‑94 (MQ=60)
                 TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCT                                                                          <  SRR4302543.4682425/94‑1 (MQ=60)
                 TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCT                                                                          <  SRR4302543.6910683/94‑1 (MQ=60)
                   CAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCG                                                                        >  SRR4302543.932955/1‑94 (MQ=60)
                   CAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCG                                                                        <  SRR4302543.3972840/94‑1 (MQ=60)
                    AGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGC                                                                       >  SRR4302543.360226/1‑94 (MQ=60)
                    AGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGA                                                                       >  SRR4302543.3648335/1‑94 (MQ=60)
                      GCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACC                                                                     <  SRR4302543.5430971/94‑1 (MQ=60)
                       CAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCA                                                                    >  SRR4302543.2169087/1‑94 (MQ=60)
                        AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAG                                                                   <  SRR4302543.1344066/94‑1 (MQ=60)
                        AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAG                                                                   <  SRR4302543.3437349/94‑1 (MQ=60)
                        AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAG                                                                   <  SRR4302543.1409902/94‑1 (MQ=60)
                        AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAG                                                                   <  SRR4302543.6106489/94‑1 (MQ=60)
                        AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAG                                                                   >  SRR4302543.3525305/1‑94 (MQ=60)
                         ATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGA                                                                  >  SRR4302543.1140007/1‑94 (MQ=60)
                         ATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGA                                                                  <  SRR4302543.1105694/94‑1 (MQ=60)
                          TCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGAT                                                                 <  SRR4302543.4698996/94‑1 (MQ=60)
                          TCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGAT                                                                 >  SRR4302543.3598418/1‑94 (MQ=60)
                           CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATC                                                                >  SRR4302543.5268398/1‑94 (MQ=60)
                           CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATC                                                                <  SRR4302543.308622/94‑1 (MQ=60)
                              GCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTC                                                             <  SRR4302543.2073380/94‑1 (MQ=60)
                               CGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCT                                                            <  SRR4302543.2052200/94‑1 (MQ=60)
                                GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTT                                                           >  SRR4302543.4734798/1‑94 (MQ=60)
                                GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTC                                                           >  SRR4302543.623336/1‑94 (MQ=60)
                                GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCAATCTCTTTTAACCGCTCGACCAGATCCTCTT                                                           <  SRR4302543.2524677/94‑1 (MQ=60)
                                  CCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCA                                                         <  SRR4302543.4581109/94‑1 (MQ=60)
                                   CGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCAC                                                        >  SRR4302543.1257588/1‑94 (MQ=60)
                                   CGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCAC                                                        >  SRR4302543.2352769/1‑94 (MQ=60)
                                    GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG                                                       >  SRR4302543.1296887/1‑94 (MQ=60)
                                    GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG                                                       <  SRR4302543.945726/94‑1 (MQ=60)
                                    GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG                                                       >  SRR4302543.5406222/1‑94 (MQ=60)
                                    GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG                                                       >  SRR4302543.7652972/1‑94 (MQ=60)
                                     TCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGA                                                      >  SRR4302543.6303027/1‑94 (MQ=60)
                                      CCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT                                                     >  SRR4302543.7535841/1‑94 (MQ=60)
                                      CCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT                                                     >  SRR4302543.999998/1‑94 (MQ=60)
                                      CCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT                                                     >  SRR4302543.4269877/1‑94 (MQ=60)
                                       cccaggtggcccctCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATA                                                    <  SRR4302543.5854348/80‑1 (MQ=60)
                                       CCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATA                                                    >  SRR4302543.289796/1‑94 (MQ=60)
                                       CCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATA                                                    >  SRR4302543.2631158/1‑94 (MQ=60)
                                       CCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATA                                                    <  SRR4302543.6507635/94‑1 (MQ=60)
                                       CCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATA                                                    <  SRR4302543.5854346/94‑1 (MQ=60)
                                        CCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAG                                                   <  SRR4302543.4001166/94‑1 (MQ=60)
                                        CCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAG                                                   >  SRR4302543.6763911/1‑94 (MQ=60)
                                        CCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAG                                                   >  SRR4302543.214452/1‑94 (MQ=60)
                                        CCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAG                                                   <  SRR4302543.2349782/94‑1 (MQ=60)
                                        CCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAG                                                   >  SRR4302543.2080155/1‑94 (MQ=60)
                                        CCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAG                                                   >  SRR4302543.6190430/1‑94 (MQ=60)
                                         CAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCCGATCCTCTTCACGATAGT                                                  >  SRR4302543.3379905/1‑94 (MQ=60)
                                          AGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTT                                                 <  SRR4302543.4997212/94‑1 (MQ=60)
                                          AGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTT                                                 <  SRR4302543.1998081/94‑1 (MQ=60)
                                          AGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTT                                                 >  SRR4302543.1771400/1‑94 (MQ=60)
                                           GGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTA                                                >  SRR4302543.4607719/1‑94 (MQ=60)
                                            GTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAA                                               >  SRR4302543.461472/1‑94 (MQ=60)
                                            GTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAA                                               >  SRR4302543.4637533/1‑94 (MQ=60)
                                            GTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAA                                               >  SRR4302543.2860984/1‑94 (MQ=60)
                                             TGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAAT                                              <  SRR4302543.6445809/94‑1 (MQ=60)
                                             TGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAAT                                              <  SRR4302543.3909497/94‑1 (MQ=60)
                                             TGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAAT                                              >  SRR4302543.5042401/1‑94 (MQ=60)
                                             TGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAAT                                              <  SRR4302543.4972322/94‑1 (MQ=60)
                                              GTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATA                                             <  SRR4302543.3531617/94‑1 (MQ=60)
                                              GTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATA                                             >  SRR4302543.6279519/1‑94 (MQ=60)
                                              GTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATA                                             >  SRR4302543.1591946/1‑94 (MQ=60)
                                               TTTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAA                                            <  SRR4302543.2673793/94‑1 (MQ=60)
                                               TCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAA                                            <  SRR4302543.2733926/94‑1 (MQ=60)
                                               TCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAA                                            <  SRR4302543.7474776/94‑1 (MQ=60)
                                               TCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAA                                            >  SRR4302543.1210596/1‑94 (MQ=60)
                                                GTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAC                                           <  SRR4302543.250530/94‑1 (MQ=60)
                                                CTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAC                                           >  SRR4302543.3904513/1‑94 (MQ=60)
                                                CTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAC                                           >  SRR4302543.3904512/1‑94 (MQ=60)
                                                CTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATACTCTTCACGATAGTTAATAAC                                           >  SRR4302543.5521929/1‑94 (MQ=60)
                                                CTCTCCCCACGGACCCGTACACCNCGCGCACTTTCTTACCGCCGGCGATCTCTTCTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAC                                           <  SRR4302543.3665979/94‑1 (MQ=60)
                                                 TCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACC                                          <  SRR4302543.2413313/94‑1 (MQ=60)
                                                 TCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACC                                          <  SRR4302543.7911294/94‑1 (MQ=60)
                                                 TCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACC                                          <  SRR4302543.5804869/94‑1 (MQ=60)
                                                 TCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACC                                          <  SRR4302543.4470298/94‑1 (MQ=60)
                                                  CTGCCCCCGGAATCGTACGCCACGCGCGCTTTCTTCCCGCCGGCGATCTCTTTTACCCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCT                                         <  SRR4302543.375921/94‑1 (MQ=60)
                                                  CTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCT                                         >  SRR4302543.6315122/1‑94 (MQ=60)
                                                  CTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCT                                         >  SRR4302543.834187/1‑94 (MQ=60)
                                                  CTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCT                                         <  SRR4302543.2099909/94‑1 (MQ=60)
                                                   TGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTG                                        <  SRR4302543.4871092/94‑1 (MQ=60)
                                                   TGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTG                                        <  SRR4302543.6844041/94‑1 (MQ=60)
                                                    GCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGC                                       <  SRR4302543.7120187/94‑1 (MQ=60)
                                                    GCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGC                                       <  SRR4302543.6142351/94‑1 (MQ=60)
                                                     CCCACGGAATCGTACACCACGCGCACTTGCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCC                                      >  SRR4302543.823692/1‑94 (MQ=60)
                                                      CCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCA                                     >  SRR4302543.3550245/1‑94 (MQ=60)
                                                      CCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCA                                     >  SRR4302543.3324492/1‑94 (MQ=60)
                                                       CACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAC                                    <  SRR4302543.7592232/94‑1 (MQ=60)
                                                       CACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAC                                    <  SRR4302543.213403/94‑1 (MQ=60)
                                                       CACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAC                                    >  SRR4302543.5396722/1‑94 (MQ=60)
                                                       CACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAC                                    >  SRR4302543.7857754/1‑94 (MQ=60)
                                                       CACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAC                                    <  SRR4302543.912672/94‑1 (MQ=60)
                                                        caGGAATCGTACCCCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACG                                   <  SRR4302543.1691940/92‑1 (MQ=60)
                                                        ACGGAATCGTACCCCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACG                                   <  SRR4302543.1448221/94‑1 (MQ=60)
                                                         CGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGC                                  <  SRR4302543.386167/94‑1 (MQ=60)
                                                         CGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGC                                  >  SRR4302543.3705498/1‑94 (MQ=60)
                                                          cgcaatcgacaaccccccccccttccTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCG                                 <  SRR4302543.1346311/68‑1 (MQ=60)
                                                          GGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCG                                 >  SRR4302543.3315261/1‑94 (MQ=60)
                                                          GGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCG                                 >  SRR4302543.652665/1‑94 (MQ=60)
                                                          GGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCG                                 >  SRR4302543.3483958/1‑94 (MQ=60)
                                                            AATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCC                               >  SRR4302543.4465989/1‑94 (MQ=60)
                                                             ATCGTACACCCCGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTGGACCAGATCCTCTTCGCGATCGTTAATACACTGCCACGCGCCG                              >  SRR4302543.7019777/1‑94 (MQ=60)
                                                             ATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCC                              >  SRR4302543.7020014/1‑94 (MQ=60)
                                                             ATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCC                              >  SRR4302543.168243/1‑94 (MQ=60)
                                                             ATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCC                              >  SRR4302543.3473397/1‑94 (MQ=60)
                                                             ATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCC                              >  SRR4302543.3242552/1‑94 (MQ=60)
                                                             ATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCC                              >  SRR4302543.2699738/1‑94 (MQ=60)
                                                              TCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCG                             <  SRR4302543.5783496/94‑1 (MQ=60)
                                                               CGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACAATAGTTAATAACCTGCCACGCGCCCGC                            >  SRR4302543.197659/1‑94 (MQ=60)
                                                                GTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCT                           >  SRR4302543.3808280/1‑94 (MQ=60)
                                                                GTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCT                           >  SRR4302543.4674773/1‑94 (MQ=60)
                                                                 TACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTCATAACCTGCCAGGCGCGCGCTT                          >  SRR4302543.2677395/1‑94 (MQ=60)
                                                                  ACACCACGCGCACTTTCTTCCCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTT                         <  SRR4302543.5397496/94‑1 (MQ=60)
                                                                     CCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAGCCTGCCACGCGCCCGCTTTTAG                      <  SRR4302543.1725630/94‑1 (MQ=60)
                                                                     CCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAG                      >  SRR4302543.6406853/1‑94 (MQ=60)
                                                                      CACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGC                     >  SRR4302543.3727040/1‑94 (MQ=60)
                                                                      CACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGC                     <  SRR4302543.109134/94‑1 (MQ=60)
                                                                       CCGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCG                    <  SRR4302543.6146720/94‑1 (MQ=60)
                                                                       CCGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCG                    <  SRR4302543.6932404/94‑1 (MQ=60)
                                                                       ACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCG                    >  SRR4302543.6719867/1‑94 (MQ=60)
                                                                       ACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCG                    <  SRR4302543.6841748/94‑1 (MQ=60)
                                                                         GCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCG                  >  SRR4302543.7073828/1‑94 (MQ=60)
                                                                          CGCACTTTCTTCCCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGC                 <  SRR4302543.1579396/94‑1 (MQ=60)
                                                                           GCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCT                >  SRR4302543.1289407/1‑94 (MQ=60)
                                                                           GCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCT                >  SRR4302543.2694997/1‑94 (MQ=60)
                                                                            CACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTC               >  SRR4302543.263553/1‑94 (MQ=60)
                                                                            CACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTC               >  SRR4302543.493319/1‑94 (MQ=60)
                                                                             ACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCT              >  SRR4302543.7910224/1‑94 (MQ=60)
                                                                             ACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCT              >  SRR4302543.4487362/1‑94 (MQ=60)
                                                                             ACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCT              >  SRR4302543.7225611/1‑94 (MQ=60)
                                                                             ACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCT              >  SRR4302543.351554/1‑94 (MQ=60)
                                                                             ACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCT              >  SRR4302543.7368749/1‑94 (MQ=60)
                                                                              CTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTG             >  SRR4302543.2498058/1‑94 (MQ=60)
                                                                              CTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTG             <  SRR4302543.260353/94‑1 (MQ=60)
                                                                              CTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTG             >  SRR4302543.6305823/1‑94 (MQ=60)
                                                                              CTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTG             >  SRR4302543.7025883/1‑94 (MQ=60)
                                                                              CTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTG             <  SRR4302543.6611757/94‑1 (MQ=60)
                                                                              CTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTG             <  SRR4302543.3017474/94‑1 (MQ=60)
                                                                               TTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGC            >  SRR4302543.1668506/1‑94 (MQ=60)
                                                                               TTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGC            <  SRR4302543.7618825/94‑1 (MQ=60)
                                                                                TTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCG           >  SRR4302543.2960620/1‑94 (MQ=60)
                                                                                TTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCG           >  SRR4302543.176417/1‑94 (MQ=60)
                                                                                TTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCG           >  SRR4302543.1382092/1‑94 (MQ=60)
                                                                                TTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACAAGATCCTCTTCACGATAGTTAATATCCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCG           >  SRR4302543.7709397/1‑94 (MQ=60)
                                                                                 TCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGC          >  SRR4302543.2737874/1‑94 (MQ=60)
                                                                                  CTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCT         >  SRR4302543.7944394/1‑94 (MQ=60)
                                                                                  CTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCT         >  SRR4302543.6092262/1‑94 (MQ=60)
                                                                                  CTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCT         >  SRR4302543.5040386/1‑94 (MQ=60)
                                                                                  CTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCT         <  SRR4302543.2000579/94‑1 (MQ=60)
                                                                                      CCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTT     <  SRR4302543.5187319/94‑1 (MQ=60)
                                                                                      CCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTT     <  SRR4302543.6226307/94‑1 (MQ=60)
                                                                                        GCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGC   <  SRR4302543.5322901/94‑1 (MQ=60)
                                                                                        GCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGC   <  SRR4302543.5010296/94‑1 (MQ=60)
                                                                                         CCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG  >  SRR4302543.5359772/1‑94 (MQ=60)
                                                                                         CCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG  >  SRR4302543.2481310/1‑94 (MQ=60)
                                                                                         CCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG  >  SRR4302543.4448212/1‑94 (MQ=60)
                                                                                         CCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG  >  SRR4302543.4964011/1‑94 (MQ=60)
                                                                                             |                                                                                         
CCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG  >  NC_000913/4261105‑4261287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑