Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,261,198 |
T→C |
T205A (ACC→GCC) |
qor ← |
quinone oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,261,198 | 0 | T | C | 100.0%
| 633.3
/ NA
| 199 | T205A (ACC→GCC) | qor | quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (102/97); total (102/97) |
Only 100 of 209 total aligned reads displayed.
TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG > NC_000913/4261108‑4261287
|
tAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAt < 1:3575508/93‑1 (MQ=255)
aaGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtc > 2:472796/1‑93 (MQ=255)
aaGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtc < 2:1090666/93‑1 (MQ=255)
aGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtct < 1:77718/93‑1 (MQ=255)
aGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtct < 1:876914/93‑1 (MQ=255)
gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtctc < 2:1145734/93‑1 (MQ=255)
gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtctc > 2:791095/1‑93 (MQ=255)
gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGAtctc < 1:2060803/93‑1 (MQ=255)
gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCttt > 1:3945860/1‑93 (MQ=255)
gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCttt < 2:2467656/93‑1 (MQ=255)
gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCttt < 2:4105119/93‑1 (MQ=255)
cggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtttt < 2:2421131/93‑1 (MQ=255)
cggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtttt > 1:2743446/1‑93 (MQ=255)
cggcgTTGCAGGCAATACAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCtttt < 1:4254342/93‑1 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAc < 2:207897/93‑1 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAc < 1:1400078/93‑1 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAc > 2:3170226/1‑93 (MQ=255)
tGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGc < 1:3341327/93‑1 (MQ=255)
tGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGc < 1:2458949/93‑1 (MQ=255)
ggCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACTGCTCGa > 1:3478338/1‑93 (MQ=255)
ggCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGa < 1:2609327/93‑1 (MQ=255)
ggCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGa > 1:3463922/1‑93 (MQ=255)
gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAc < 2:222471/93‑1 (MQ=255)
gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAc > 1:1322658/1‑93 (MQ=255)
gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAc < 1:249926/93‑1 (MQ=255)
gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAc < 1:4462095/93‑1 (MQ=255)
gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAc > 1:2241759/1‑93 (MQ=255)
tCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGa < 1:1645845/93‑1 (MQ=255)
ccAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGAt < 1:3168900/93‑1 (MQ=255)
cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATc < 1:3024215/93‑1 (MQ=255)
cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATc < 2:4158429/93‑1 (MQ=255)
cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATc > 2:2584676/1‑93 (MQ=255)
gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCct < 2:1424212/93‑1 (MQ=255)
gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCct > 1:658464/1‑93 (MQ=255)
gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCct < 2:3729352/93‑1 (MQ=255)
cGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCctc < 2:3275005/93‑1 (MQ=255)
gACCGTCCCCAGCTGTCTCTGCCCACGGAATCGTACACCACGCGCGCTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCctct < 1:4199791/93‑1 (MQ=255)
caCCGTCCCCAGGTGACTCTGCCCACGGAATAGTACACCACGCGCACTTTCTTCCCGCCGGCGATCTCTTTTAAACGCTCGACCAGATCctct < 2:2866436/92‑1 (MQ=255)
aCCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCtt > 1:1952020/1‑93 (MQ=255)
cGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCa < 2:692643/93‑1 (MQ=255)
gtccccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCAc < 1:1048836/90‑1 (MQ=255)
cccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAt < 2:4431018/93‑1 (MQ=255)
cccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAt < 2:156057/93‑1 (MQ=255)
ccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATa > 2:3775980/1‑93 (MQ=255)
ccAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATa > 1:535027/1‑93 (MQ=255)
cAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAg > 2:1476399/1‑93 (MQ=255)
cAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAg > 2:1910412/1‑93 (MQ=255)
ggTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGtt > 2:836185/1‑93 (MQ=255)
ggTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGtt > 1:1558668/1‑93 (MQ=255)
ggTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGtt > 2:2132092/1‑93 (MQ=255)
ggTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGtt > 1:369611/1‑93 (MQ=255)
tgtCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaa > 2:917891/1‑93 (MQ=255)
gtCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaat < 2:1610021/93‑1 (MQ=255)
gtCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaat < 1:1185351/93‑1 (MQ=255)
gtCTCTCCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaat < 2:1828564/93‑1 (MQ=255)
tctcTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaata < 1:2165886/93‑1 (MQ=255)
tctcTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaata < 2:1030129/93‑1 (MQ=255)
tctcTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTtaata > 2:600607/1‑93 (MQ=255)
tctGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAc < 2:1274365/93‑1 (MQ=255)
tctGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGATAATAAc > 2:4199235/1‑93 (MQ=255)
ctGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAGCGCTCGACCAGATCCTCTTCACGATAGTTAATAAcc < 2:1958100/93‑1 (MQ=255)
ctGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAcc > 2:961453/1‑93 (MQ=255)
ctGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAcc < 2:636812/93‑1 (MQ=255)
ctGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAcc < 1:3136140/93‑1 (MQ=255)
tGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCt > 1:2411693/1‑93 (MQ=255)
gCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTg < 2:1376744/93‑1 (MQ=255)
cccACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGc > 1:3084286/1‑93 (MQ=255)
cACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCa < 1:4099190/93‑1 (MQ=255)
cGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAcg > 1:4074875/1‑93 (MQ=255)
cGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAcg > 1:725195/1‑93 (MQ=255)
gAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAcgcg > 2:2485502/1‑93 (MQ=255)
aTCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGcc > 1:2760274/1‑93 (MQ=255)
aTCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGcc > 2:3519206/1‑93 (MQ=255)
tCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGccc > 2:573950/1‑93 (MQ=255)
cGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCg > 2:3094376/1‑93 (MQ=255)
caccacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCttt < 2:2728266/93‑1 (MQ=255)
caccacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCttt < 1:1695167/93‑1 (MQ=255)
ccacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTa < 2:1222480/93‑1 (MQ=255)
ccacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTa > 2:2801581/1‑93 (MQ=255)
ccacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTa < 2:3596046/93‑1 (MQ=255)
cacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAg > 1:2887357/1‑93 (MQ=255)
cacGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAg > 1:2112281/1‑93 (MQ=255)
acGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAgc < 1:3630196/93‑1 (MQ=255)
acGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAgc > 1:3870999/1‑93 (MQ=255)
cgcgCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAgcg < 2:4243040/93‑1 (MQ=255)
cgcgCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAgcg < 2:2970790/93‑1 (MQ=255)
gcACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAgcgcgc > 2:3705908/1‑93 (MQ=255)
ccTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGctc < 1:4353992/92‑1 (MQ=255)
cTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGctct > 1:918701/1‑93 (MQ=255)
cTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATACTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGctct > 1:3309642/1‑93 (MQ=255)
tttCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTg > 2:2850866/1‑93 (MQ=255)
ttCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTgc < 2:4513832/93‑1 (MQ=255)
ttCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTgc < 1:514237/93‑1 (MQ=255)
cTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTgcgc < 2:1007493/93‑1 (MQ=255)
ttACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCt > 2:2517121/1‑93 (MQ=255)
aCCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGAttt > 2:2261969/1‑93 (MQ=255)
ccgccgGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCtttt > 2:2032231/1‑93 (MQ=255)
ccgGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTgc > 1:283617/1‑93 (MQ=255)
ccgGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTgc > 1:454868/1‑93 (MQ=255)
cgGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTgcg > 2:1866763/1‑93 (MQ=255)
|
TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCG > NC_000913/4261108‑4261287
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCGCG > NC_000913/4261107‑4261289
|
ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGA > SRR4302535.4206108/1‑94 (MQ=60)
ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGA > SRR4302535.4023613/1‑94 (MQ=60)
TAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATC < SRR4302535.1295227/94‑1 (MQ=60)
TAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATC < SRR4302535.3600295/94‑1 (MQ=60)
AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC > SRR4302535.3625622/1‑94 (MQ=60)
AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC < SRR4302535.78273/94‑1 (MQ=60)
AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTC < SRR4302535.883123/94‑1 (MQ=60)
GCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCT < SRR4302535.2075654/94‑1 (MQ=60)
GCCGCGGCGTTGCAGGCAAGCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCT < SRR4302535.1707139/94‑1 (MQ=60)
CCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTT < SRR4302535.3656735/94‑1 (MQ=60)
CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTT > SRR4302535.3972806/1‑94 (MQ=60)
GCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTT > SRR4302535.2762999/1‑94 (MQ=60)
CGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACACCGCGCACTTTTTTACCGCGGGCGCTCTCTTTTA > SRR4302535.923399/1‑94 (MQ=60)
CGGCGTTGCAGGCAATACAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTA < SRR4302535.4283489/94‑1 (MQ=60)
GCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAAC < SRR4302535.2327253/94‑1 (MQ=60)
GCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACCTTCTTACCGCCGGCGATCTCTTTTAAC > SRR4302535.2063978/1‑94 (MQ=60)
CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACC < SRR4302535.1410074/94‑1 (MQ=60)
CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACC < SRR4302535.4385529/94‑1 (MQ=60)
GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCG < SRR4302535.1576818/94‑1 (MQ=60)
TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCT < SRR4302535.2476682/94‑1 (MQ=60)
TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCT < SRR4302535.3364606/94‑1 (MQ=60)
GAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCG < SRR4302535.1431208/94‑1 (MQ=60)
CAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCG < SRR4302535.4105010/94‑1 (MQ=60)
AGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACTGCTCGA > SRR4302535.3502507/1‑94 (MQ=60)
AGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGA > SRR4302535.3487998/1‑94 (MQ=60)
GGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAC < SRR4302535.2628050/94‑1 (MQ=60)
GGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAC > SRR4302535.2257707/1‑94 (MQ=60)
GGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGAC > SRR4302535.1332099/1‑94 (MQ=60)
GCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACC < SRR4302535.4492698/94‑1 (MQ=60)
GCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACC < SRR4302535.3463822/94‑1 (MQ=60)
GCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACC < SRR4302535.251646/94‑1 (MQ=60)
CAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCA > SRR4302535.2617145/1‑94 (MQ=60)
CAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCA > SRR4302535.3902581/1‑94 (MQ=60)
AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAT > SRR4302535.2835655/1‑94 (MQ=60)
ATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGA > SRR4302535.705446/1‑94 (MQ=60)
TCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGAT < SRR4302535.1657737/94‑1 (MQ=60)
CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATC < SRR4302535.3190851/94‑1 (MQ=60)
CAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCC < SRR4302535.3045387/94‑1 (MQ=60)
CAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCC < SRR4302535.3790901/94‑1 (MQ=60)
AGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCT > SRR4302535.663062/1‑94 (MQ=60)
AGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCT > SRR4302535.4114205/1‑94 (MQ=60)
GCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTC < SRR4302535.3037994/94‑1 (MQ=60)
GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTT > SRR4302535.1966068/1‑94 (MQ=60)
GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTT > SRR4302535.2716402/1‑94 (MQ=60)
GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTT > SRR4302535.491175/1‑94 (MQ=60)
GACCGTCCCCAGCTGTCTCTGCCCACGGAATCGTACACCACGCGCGCTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTT < SRR4302535.4228529/94‑1 (MQ=60)
ACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTC > SRR4302535.807401/1‑94 (MQ=60)
GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG < SRR4302535.1056296/94‑1 (MQ=60)
GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG > SRR4302535.189994/1‑94 (MQ=60)
CCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT < SRR4302535.2160297/94‑1 (MQ=60)
CCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATA > SRR4302535.812058/1‑94 (MQ=60)
CCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATA > SRR4302535.538767/1‑94 (MQ=60)
CCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAG < SRR4302535.3181268/94‑1 (MQ=60)
CCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAG > SRR4302535.3184859/1‑94 (MQ=60)
CCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAG > SRR4302535.2415375/1‑94 (MQ=60)
CAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCACTCGACCAGATCCTCTTCACGATAGT > SRR4302535.285888/1‑94 (MQ=60)
AGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTT > SRR4302535.372163/1‑94 (MQ=60)
AGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTT > SRR4302535.1569908/1‑94 (MQ=60)
AGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTT < SRR4302535.4267124/94‑1 (MQ=60)
TGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAAT < SRR4302535.4309900/94‑1 (MQ=60)
TGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAAT > SRR4302535.3222238/1‑94 (MQ=60)
GTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATA < SRR4302535.1193820/94‑1 (MQ=60)
TCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAA < SRR4302535.2181414/94‑1 (MQ=60)
CTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAC > SRR4302535.752986/1‑94 (MQ=60)
CTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAAC > SRR4302535.990664/1‑94 (MQ=60)
CTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCT < SRR4302535.1362656/94‑1 (MQ=60)
CTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCT > SRR4302535.2429053/1‑94 (MQ=60)
CTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCT < SRR4302535.3517096/94‑1 (MQ=60)
CTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCT < SRR4302535.211131/94‑1 (MQ=60)
CTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCT < SRR4302535.3157967/94‑1 (MQ=60)
GCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGC > SRR4302535.3105777/1‑94 (MQ=60)
CCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTTACGTTAGTTAATAACCTCCC > SRR4302535.3122183/1‑94 (MQ=60)
CACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCAC < SRR4302535.4127256/94‑1 (MQ=60)
ACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACG > SRR4302535.730285/1‑94 (MQ=60)
ACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACG > SRR4302535.4102756/1‑94 (MQ=60)
CGGAATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGC > SRR4302535.530191/1‑94 (MQ=60)
AATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCC > SRR4302535.2779943/1‑94 (MQ=60)
ATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCC < SRR4302535.3105407/94‑1 (MQ=60)
ATCGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCC < SRR4302535.2446837/94‑1 (MQ=60)
CGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGC < SRR4302535.277696/94‑1 (MQ=60)
CACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTT < SRR4302535.1707420/94‑1 (MQ=60)
ACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTA > SRR4302535.4529844/1‑94 (MQ=60)
CCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAG > SRR4302535.2127528/1‑94 (MQ=60)
CCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAG > SRR4302535.2907787/1‑94 (MQ=60)
CACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGC > SRR4302535.3897601/1‑94 (MQ=60)
CACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGC < SRR4302535.587945/94‑1 (MQ=60)
ACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCG > SRR4302535.3343425/1‑94 (MQ=60)
ACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCG < SRR4302535.3655357/94‑1 (MQ=60)
CGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGC > SRR4302535.2222371/1‑94 (MQ=60)
GCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCG < SRR4302535.3502229/94‑1 (MQ=60)
CCTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCT < SRR4302535.4383791/94‑1 (MQ=60)
ACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCT > SRR4302535.925217/1‑94 (MQ=60)
ACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATACTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCT > SRR4302535.3332671/1‑94 (MQ=60)
TTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCG < SRR4302535.517831/94‑1 (MQ=60)
TACCGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTT > SRR4302535.2496399/1‑94 (MQ=60)
CGCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTG < SRR4302535.117819/94‑1 (MQ=60)
GCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGC > SRR4302535.458053/1‑94 (MQ=60)
GCCGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGC > SRR4302535.285594/1‑94 (MQ=60)
CGGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCGC > SRR4302535.1840219/1‑94 (MQ=60)
GGCGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCGCG < SRR4302535.3590132/94‑1 (MQ=60)
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ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGATAGTTAATAACCTGCCACGCGCCCGCTTTTAGCGCGCTCTGCGCTTTTTGCGCG > NC_000913/4261107‑4261289
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
