Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,298,670 |
A→G |
L616S (TTG→TCG) |
yjcQ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,298,670 | 0 | A | G | 100.0%
| 579.5
/ NA
| 186 | L616S (TTG→TCG) | yjcQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (78/108); total (78/108) |
Only 100 of 201 total aligned reads displayed.
CAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATT > NC_000913/4298580‑4298759
|
cagACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCgg < 1:3163713/93‑1 (MQ=255)
agACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGGGGTGCAGGCTGGCGAGCggg > 1:1799203/1‑93 (MQ=255)
gACGTGAATGTTGACGATTCATCATTGCGTGGCTCCTTGTGGCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTACTGTCTGGCGAGCgggg > 2:4547176/1‑92 (MQ=255)
gACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGc > 2:1457395/1‑93 (MQ=255)
gTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGAGaa > 1:2922418/1‑93 (MQ=255)
gTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGGTAATGCCGGGTCTGTCCAGTCTGGCGAGCGGGCGaa > 2:1334872/1‑93 (MQ=255)
tGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGaaa < 1:1742690/93‑1 (MQ=255)
tGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGaaa > 1:3005991/1‑93 (MQ=255)
gAAAGTTGACGATTGATCATTTCGTGCCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGaaaa < 1:1831943/93‑1 (MQ=255)
gAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGaaaa < 2:1964939/93‑1 (MQ=255)
aaGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGc < 1:2415828/93‑1 (MQ=255)
gTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTg > 2:2958429/1‑93 (MQ=255)
ttGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTTCAGTCTGGCGAGCGGGCGAAAAGCTgg > 2:268675/1‑93 (MQ=255)
ttGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTgg > 1:1688375/1‑93 (MQ=255)
tGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGc < 1:490950/93‑1 (MQ=255)
gACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCa > 1:2172987/1‑93 (MQ=255)
gACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCa < 1:198992/93‑1 (MQ=255)
aCGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGGAAAGCTGGCAg > 2:4363451/1‑93 (MQ=255)
aCGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAg > 1:911120/1‑93 (MQ=255)
cGATTGATCATTGCGTGGGTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCCGGGCTGTCCAGCCTGGCGCGGGGGCGAAAAGCTTGCTGa > 2:254431/1‑93 (MQ=255)
cGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGa < 2:824864/93‑1 (MQ=255)
cGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGa < 2:2781861/93‑1 (MQ=255)
cGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGa < 2:4599422/93‑1 (MQ=255)
aTTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACg > 2:4281377/1‑93 (MQ=255)
ttGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGACAAGCTGGCAGACgg > 2:3186072/1‑92 (MQ=255)
ttGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgt < 1:637007/93‑1 (MQ=255)
ttGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgt < 2:136564/93‑1 (MQ=255)
ttGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgt < 1:1606212/93‑1 (MQ=255)
tGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgtg < 1:2088267/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACgtgt < 2:2570485/93‑1 (MQ=255)
tCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTg > 1:4123890/1‑93 (MQ=255)
cATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGc > 2:2010184/1‑93 (MQ=255)
cATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGc < 1:1264511/93‑1 (MQ=255)
aTTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCt > 2:2112292/1‑93 (MQ=255)
gCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCt < 2:4132508/93‑1 (MQ=255)
gCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCt < 2:193582/93‑1 (MQ=255)
cGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTg < 1:4496521/93‑1 (MQ=255)
cGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTg < 1:3095064/93‑1 (MQ=255)
gTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGt < 2:4639296/93‑1 (MQ=255)
tGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGtt < 1:4290077/93‑1 (MQ=255)
ggCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGttt > 1:2652633/1‑93 (MQ=255)
ggCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGttt < 1:692193/93‑1 (MQ=255)
cTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTta < 1:2408489/93‑1 (MQ=255)
tCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaa > 2:1509870/1‑93 (MQ=255)
tCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaa > 2:382081/1‑93 (MQ=255)
tCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaa > 2:1252226/1‑93 (MQ=255)
ccTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTttat > 2:2818916/1‑93 (MQ=255)
cTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGGAGACGTGTTGCTCCTGTTTttata > 2:938141/1‑93 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCTGGGGCTGTCCAGGCTGGCGAGCGGGCTAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaataa < 1:365363/93‑1 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGGGCGGGGGAAAAGCTCGCACGCGTGCTGCTCCTGGTTtaataa > 2:3027897/1‑93 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaataa < 2:1214878/93‑1 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaataa > 1:1930408/1‑93 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaataa < 2:1816370/93‑1 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTtaataa > 2:4613466/1‑93 (MQ=255)
tgtgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAg < 1:2912328/93‑1 (MQ=255)
gtgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAgg > 2:2890973/1‑93 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAggg > 2:4039381/1‑92 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGt < 1:1000384/93‑1 (MQ=255)
ccTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTgg < 1:162732/93‑1 (MQ=255)
ccTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTgg < 2:61956/93‑1 (MQ=255)
tGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGc < 2:967191/93‑1 (MQ=255)
gTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCa > 2:2744928/1‑93 (MQ=255)
ccGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGa < 1:3445804/93‑1 (MQ=255)
cGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAt < 1:2247886/93‑1 (MQ=255)
cGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAt < 2:1634794/93‑1 (MQ=255)
gTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATg > 2:3688714/1‑93 (MQ=255)
gTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATg > 2:1097250/1‑93 (MQ=255)
tGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATgg > 1:173361/1‑93 (MQ=255)
tGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGAGGGCAGGACgg > 1:4620357/1‑93 (MQ=255)
ggcgggcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGc > 1:2553581/1‑93 (MQ=255)
gcgggcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGcc < 2:3970697/93‑1 (MQ=255)
gcgggcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGcc > 2:490596/1‑93 (MQ=255)
ggcgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTga < 1:3263844/93‑1 (MQ=255)
cgTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgaga < 1:3571776/93‑1 (MQ=255)
gTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGTCCTGagag > 1:4202086/1‑93 (MQ=255)
gTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGagag > 2:1169384/1‑93 (MQ=255)
gTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGagag > 2:518166/1‑93 (MQ=255)
gTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGagag < 2:3433716/93‑1 (MQ=255)
gTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGagag < 2:1830864/93‑1 (MQ=255)
ttAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGTTGGGCAGGATGGCCTGAGAgg < 2:1046383/93‑1 (MQ=255)
ttAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAgg > 2:143122/1‑93 (MQ=255)
tAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGc > 2:2231278/1‑93 (MQ=255)
tAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGc < 1:3631424/93‑1 (MQ=255)
aaTGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCg > 1:3703232/1‑93 (MQ=255)
tGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCggg > 1:377852/1‑93 (MQ=255)
gCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGgt < 1:4062469/93‑1 (MQ=255)
ggggCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGtc < 1:251454/93‑1 (MQ=255)
gggCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGtct < 1:3348610/93‑1 (MQ=255)
ggCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGtctc < 1:3421003/93‑1 (MQ=255)
cgTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGCCCTGAGAGGCCGGTGTCTCTTc < 2:3526791/92‑1 (MQ=255)
gTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTCttga > 2:3911572/1‑91 (MQ=255)
tCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGCGTCTCTTcca > 2:3034898/1‑91 (MQ=255)
cAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTGTCTTCTAGc > 1:2615372/1‑93 (MQ=255)
cAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGc < 1:1077771/93‑1 (MQ=255)
aGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCg > 2:3197889/1‑93 (MQ=255)
gTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGt > 1:4567224/1‑93 (MQ=255)
gTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTTTCCTCCAACGt > 2:11429/1‑93 (MQ=255)
tCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGtt < 1:67670/93‑1 (MQ=255)
tCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGtt < 2:727370/93‑1 (MQ=255)
tCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGtt < 2:2441293/93‑1 (MQ=255)
|
CAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATT > NC_000913/4298580‑4298759
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTT > NC_000913/4298577‑4298760
|
CAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCG < SRR4302535.2326072/94‑1 (MQ=60)
CAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCG < SRR4302535.2480211/94‑1 (MQ=60)
CAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGGGGTGCAGGCTGGCGAGCGGG > SRR4302535.1812212/1‑94 (MQ=60)
CAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGG < SRR4302535.3185652/94‑1 (MQ=60)
CGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGAGAA > SRR4302535.2943029/1‑94 (MQ=60)
GTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAA > SRR4302535.3027054/1‑94 (MQ=60)
TGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAA < SRR4302535.1755290/94‑1 (MQ=60)
GAAAGTTGACGATTGATCATTTCGTGCCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAG < SRR4302535.1845160/94‑1 (MQ=60)
AAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCT < SRR4302535.2433219/94‑1 (MQ=60)
AAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCT < SRR4302535.1750196/94‑1 (MQ=60)
AGGTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTG < SRR4302535.2933914/94‑1 (MQ=60)
GTTGACGATTGATTATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGG < SRR4302535.208997/94‑1 (MQ=60)
GTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGG < SRR4302535.3126905/94‑1 (MQ=60)
GTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGG > SRR4302535.1700598/1‑94 (MQ=60)
TGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCA > SRR4302535.2188532/1‑94 (MQ=60)
TGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCA < SRR4302535.494393/94‑1 (MQ=60)
GACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTACTGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAG < SRR4302535.2539873/94‑1 (MQ=60)
GACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAG < SRR4302535.200356/94‑1 (MQ=60)
GACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAG > SRR4302535.917598/1‑94 (MQ=60)
GACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAG > SRR4302535.3572249/1‑94 (MQ=60)
GACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAG < SRR4302535.4389792/94‑1 (MQ=60)
GACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAG < SRR4302535.4678303/94‑1 (MQ=60)
GACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAG < SRR4302535.72370/94‑1 (MQ=60)
CGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGAC < SRR4302535.1030586/94‑1 (MQ=60)
CGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGAC > SRR4302535.1440033/1‑94 (MQ=60)
ATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGT < SRR4302535.2638653/94‑1 (MQ=60)
TTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTG < SRR4302535.1617802/94‑1 (MQ=60)
TTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTG < SRR4302535.641450/94‑1 (MQ=60)
TGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGGCGGGGCTGTCCAGTATGGCGAGCGGGCGAAAAGCTGGCAGACGTGT > SRR4302535.2991072/1‑94 (MQ=60)
TGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGT < SRR4302535.2103314/94‑1 (MQ=60)
ATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTG > SRR4302535.4152109/1‑94 (MQ=60)
ATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTG < SRR4302535.2607282/94‑1 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCT > SRR4302535.1115481/1‑94 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCT < SRR4302535.1273557/94‑1 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCT > SRR4302535.1974905/1‑94 (MQ=60)
TGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCT < SRR4302535.2762845/94‑1 (MQ=60)
CGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGT < SRR4302535.4527391/94‑1 (MQ=60)
CGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGT < SRR4302535.3116616/94‑1 (MQ=60)
GTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTT < SRR4302535.4534994/94‑1 (MQ=60)
TGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTT < SRR4302535.4319418/94‑1 (MQ=60)
TGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTT > SRR4302535.2671636/1‑94 (MQ=60)
GGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT < SRR4302535.697044/94‑1 (MQ=60)
GCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTA < SRR4302535.3625661/94‑1 (MQ=60)
GCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTA > SRR4302535.4229378/1‑94 (MQ=60)
GCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTA > SRR4302535.1917996/1‑94 (MQ=60)
CTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAA < SRR4302535.2425829/94‑1 (MQ=60)
CTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAA > SRR4302535.4281819/1‑94 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAA > SRR4302535.1944320/1‑94 (MQ=60)
TTGTGCCTGTTCCGTGGCGGGCGTTAATGCTGGGGCTGTCCAGGCTGGCGAGCGGGCTAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAG < SRR4302535.367875/94‑1 (MQ=60)
TGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGACAAGCTGGCAGACGTGGTGCGCCTGCTTTAATAAGG > SRR4302535.1547010/1‑94 (MQ=60)
TGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGG < SRR4302535.2932902/94‑1 (MQ=60)
GTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGT < SRR4302535.2188488/94‑1 (MQ=60)
GTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGG > SRR4302535.329710/1‑94 (MQ=60)
TGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTG < SRR4302535.1007495/94‑1 (MQ=60)
TGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTG > SRR4302535.3669588/1‑94 (MQ=60)
TGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTG < SRR4302535.1737636/94‑1 (MQ=60)
CCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGG > SRR4302535.2214453/1‑94 (MQ=60)
CCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGG < SRR4302535.163870/94‑1 (MQ=60)
TGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGGCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGGGGGCG > SRR4302535.1812480/1‑94 (MQ=60)
GTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAG > SRR4302535.1638127/1‑94 (MQ=60)
TTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGG < SRR4302535.2337574/94‑1 (MQ=60)
CCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAT < SRR4302535.3469761/94‑1 (MQ=60)
CCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAG > SRR4302535.251654/1‑94 (MQ=60)
CGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATG < SRR4302535.2263889/94‑1 (MQ=60)
GTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGG > SRR4302535.174559/1‑94 (MQ=60)
GTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGAGGGCAGGACGG > SRR4302535.4651751/1‑94 (MQ=60)
TGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGC > SRR4302535.2571966/1‑94 (MQ=60)
CGGGCGTTATTGCGGGGGCTGTCCAGTCGGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTG < SRR4302535.4136827/94‑1 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG < SRR4302535.3286512/94‑1 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG < SRR4302535.642925/94‑1 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGTCCTGAGAG > SRR4302535.4230835/1‑94 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG < SRR4302535.3596543/94‑1 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG > SRR4302535.60338/1‑94 (MQ=60)
GTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGG < SRR4302535.3727031/94‑1 (MQ=60)
GTTAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGG > SRR4302535.690577/1‑94 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG < SRR4302535.3656598/94‑1 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG < SRR4302535.2432375/94‑1 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG > SRR4302535.3728876/1‑94 (MQ=60)
ATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGG > SRR4302535.380471/1‑94 (MQ=60)
ATGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGG < SRR4302535.3428298/94‑1 (MQ=60)
TGCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGT < SRR4302535.3050900/94‑1 (MQ=60)
GCCGGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTG < SRR4302535.4090274/94‑1 (MQ=60)
GGGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCT < SRR4302535.253185/94‑1 (MQ=60)
GGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGgggctt > SRR4302535.2619443/1‑88 (MQ=60)
GGGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTC < SRR4302535.3371937/94‑1 (MQ=60)
GGCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCT < SRR4302535.3444796/94‑1 (MQ=60)
GCTGTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTGTCTT > SRR4302535.1005316/1‑94 (MQ=60)
GTCCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAA < SRR4302535.1794214/94‑1 (MQ=60)
CCAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTGTCTTCTAGC > SRR4302535.2634128/1‑94 (MQ=60)
CAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCG < SRR4302535.1085439/94‑1 (MQ=60)
CAGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCG > SRR4302535.3800508/1‑94 (MQ=60)
AGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGT > SRR4302535.4598377/1‑94 (MQ=60)
AGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGT < SRR4302535.3224742/94‑1 (MQ=60)
AGTCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCGT > SRR4302535.1678208/1‑94 (MQ=60)
TCTGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTA < SRR4302535.68174/94‑1 (MQ=60)
TGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATT < SRR4302535.3893895/94‑1 (MQ=60)
TGGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATT < SRR4302535.3463517/94‑1 (MQ=60)
GGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTT < SRR4302535.464645/94‑1 (MQ=60)
GGCGAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTCTTCAAGCGTTATTT > SRR4302535.4238994/1‑94 (MQ=60)
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CAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTT > NC_000913/4298577‑4298760
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
