Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,300,903 A→G G262G (GGT→GGC yjcR ← putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,300,9030AG99.7% 1223.5 / NA 386G262G (GGT→GGCyjcRputative membrane protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (168/217);  total (169/217)
Fisher's exact test for biased strand distribution p-value = 4.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 398 total aligned reads displayed.

GTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTACCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCAT  >  NC_000913/4300813‑4300992
                                                                                          |                                                                                         
gTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGcc                                                                                         <  1:1097798/93‑1 (MQ=255)
gTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGcc                                                                                         >  1:4584743/1‑93 (MQ=255)
 tCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCt                                                                                        <  1:3383432/93‑1 (MQ=255)
    tCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAg                                                                                     >  1:4884166/1‑93 (MQ=255)
     ccGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGc                                                                                    <  1:5698763/93‑1 (MQ=255)
      cGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCg                                                                                   >  2:1835528/1‑93 (MQ=255)
        gTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGaa                                                                                 <  2:769691/93‑1 (MQ=255)
        gTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGaa                                                                                 >  1:5458273/1‑93 (MQ=255)
          aGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAata                                                                               <  2:20324/93‑1 (MQ=255)
           gCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAatat                                                                              <  1:1702584/93‑1 (MQ=255)
             aCGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATAttt                                                                            >  1:5146038/1‑93 (MQ=255)
                ccGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTc                                                                         <  2:713653/93‑1 (MQ=255)
                 cGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCa                                                                        <  2:3316873/93‑1 (MQ=255)
                 cGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCa                                                                        <  2:3972647/93‑1 (MQ=255)
                 cGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCa                                                                        <  1:7419895/93‑1 (MQ=255)
                  gTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAg                                                                       >  1:7163959/1‑93 (MQ=255)
                   tAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGa                                                                      >  2:7909985/1‑93 (MQ=255)
                   tAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGa                                                                      <  1:2083774/93‑1 (MQ=255)
                    aGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGAt                                                                     >  1:2786107/1‑93 (MQ=255)
                    aGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGAt                                                                     <  1:7378850/93‑1 (MQ=255)
                      ccAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCg                                                                   <  1:4156451/93‑1 (MQ=255)
                        aaTCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGt                                                                 >  1:7688689/1‑93 (MQ=255)
                         aTCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGtt                                                                <  2:33675/93‑1 (MQ=255)
                         aTCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGtt                                                                >  2:658051/1‑93 (MQ=255)
                          tCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGttt                                                               <  2:1375651/93‑1 (MQ=255)
                          tCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGttt                                                               <  2:3756256/93‑1 (MQ=255)
                          tCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGttt                                                               <  1:7823352/93‑1 (MQ=255)
                          tCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGttt                                                               <  1:6507540/93‑1 (MQ=255)
                             aaTCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTcgc                                                            <  1:462975/93‑1 (MQ=255)
                             aaTCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTcgc                                                            >  2:4447436/1‑93 (MQ=255)
                              aTCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTcgcg                                                           <  1:5627336/93‑1 (MQ=255)
                               tCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCgg                                                          >  1:3248979/1‑93 (MQ=255)
                                ccACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGa                                                         >  1:1275317/1‑93 (MQ=255)
                                  aCTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAg                                                       >  2:5070620/1‑93 (MQ=255)
                                  aCTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAg                                                       <  2:221665/93‑1 (MQ=255)
                                  aCTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAg                                                       >  2:5831105/1‑93 (MQ=255)
                                   cTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGt                                                      <  1:6656183/93‑1 (MQ=255)
                                   cTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGt                                                      >  2:2907951/1‑93 (MQ=255)
                                    tttACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGtt                                                     >  1:2518603/1‑93 (MQ=255)
                                    tttACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGtt                                                     >  1:2154042/1‑93 (MQ=255)
                                     ttACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTg                                                    <  2:7227819/93‑1 (MQ=255)
                                      tACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTgg                                                   <  1:1968886/93‑1 (MQ=255)
                                      tACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTgg                                                   <  2:144882/93‑1 (MQ=255)
                                       aCCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGc                                                  <  2:1099968/93‑1 (MQ=255)
                                        cccTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCg                                                 >  1:6363827/1‑93 (MQ=255)
                                         ccTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGa                                                >  2:3444104/1‑93 (MQ=255)
                                         ccTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGa                                                <  1:4769664/93‑1 (MQ=255)
                                         ccTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGa                                                <  2:5919284/93‑1 (MQ=255)
                                          cTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGGTGGCGAt                                               >  1:1879585/1‑93 (MQ=255)
                                           tCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATc                                              <  2:3083744/93‑1 (MQ=255)
                                            cGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATca                                             <  1:5847628/93‑1 (MQ=255)
                                            cGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATca                                             <  1:1214569/93‑1 (MQ=255)
                                             gAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATcac                                            >  2:4578879/1‑93 (MQ=255)
                                             gAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATcac                                            >  2:6348886/1‑93 (MQ=255)
                                             gAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGCAAGTTGGCGATcac                                            >  2:5698424/1‑93 (MQ=255)
                                             gAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGGTTCGCGGAAGTTGGCGATcac                                            >  2:3220155/1‑93 (MQ=255)
                                              aaGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATcaca                                           <  1:3622912/93‑1 (MQ=255)
                                              aaGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATcaca                                           <  1:7472741/93‑1 (MQ=255)
                                                agTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATa                                         <  1:2974895/92‑1 (MQ=255)
                                                 gTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATAc                                        >  2:325758/1‑93 (MQ=255)
                                                    ttGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAg                                     <  1:368126/93‑1 (MQ=255)
                                                    ttGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAg                                     <  1:2706774/93‑1 (MQ=255)
                                                    ttGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAg                                     <  2:5369636/93‑1 (MQ=255)
                                                     tGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGt                                    <  2:5202834/93‑1 (MQ=255)
                                                     tGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGt                                    <  1:7677722/93‑1 (MQ=255)
                                                     tGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGt                                    <  1:2304859/93‑1 (MQ=255)
                                                     tGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGt                                    <  1:4293249/93‑1 (MQ=255)
                                                      gCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGCATATTTTTCAGATCGGTTTTGCGGAAGTTGGCGATCACATACCAGTg                                   >  1:7121974/1‑93 (MQ=255)
                                                      gCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTg                                   <  2:5777853/93‑1 (MQ=255)
                                                       gcGCTGTCACTCATGAGGCGAATCGTTGCGGGGGTGCCTGAGCGAATATTTTTCAGATCGTTTTCGCGGAAGTTGGCGATCACATACCAGTGa                                  <  1:2445059/92‑1 (MQ=255)
                                                       ccGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGa                                  <  2:3643448/93‑1 (MQ=255)
                                                       ccGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGa                                  <  2:555683/93‑1 (MQ=255)
                                                       ccGCTGTCACTCATCAGGAGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGa                                  <  1:6907971/93‑1 (MQ=255)
                                                          cTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGa                               <  2:6099827/93‑1 (MQ=255)
                                                           tGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAg                              <  1:390448/93‑1 (MQ=255)
                                                           tGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAg                              >  1:4748816/1‑93 (MQ=255)
                                                            gTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAgt                             <  1:4089861/93‑1 (MQ=255)
                                                             tCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAgtg                            <  1:1562990/93‑1 (MQ=255)
                                                              cACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAgtgt                           >  1:3734603/1‑93 (MQ=255)
                                                               aCTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTc                          >  1:87807/1‑93 (MQ=255)
                                                               aCTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTc                          <  2:75868/93‑1 (MQ=255)
                                                               aCTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTc                          <  2:436922/93‑1 (MQ=255)
                                                                cTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATCCCAGTTACGAGTGTcc                         >  2:6439434/1‑92 (MQ=255)
                                                                 ccatcaGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGa                        <  1:1392715/92‑1 (MQ=255)
                                                                  catcaGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGAt                       <  2:4015506/93‑1 (MQ=255)
                                                                   atcaGGCGAATCGTTGCGGGTGGCCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGGGTCGAtt                      <  2:6818003/93‑1 (MQ=255)
                                                                      aGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAgg                   <  2:4712942/93‑1 (MQ=255)
                                                                      aGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAgg                   >  2:6670551/1‑93 (MQ=255)
                                                                       ggCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAggg                  <  2:7444359/93‑1 (MQ=255)
                                                                           aaTCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTaaa              <  1:1510108/93‑1 (MQ=255)
                                                                            aTCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTaaaa             >  1:4372216/1‑93 (MQ=255)
                                                                             tCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTaaaaa            <  1:454587/93‑1 (MQ=255)
                                                                             tCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTaaaaa            >  1:6128619/1‑93 (MQ=255)
                                                                               gTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATa          <  1:1007391/93‑1 (MQ=255)
                                                                                ttGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAg         >  2:905258/1‑93 (MQ=255)
                                                                                     ggTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGgcgc    >  1:5558115/1‑93 (MQ=255)
                                                                                      gtgtGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCa   <  2:6937240/93‑1 (MQ=255)
                                                                                      gtgtGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCa   <  2:4896828/93‑1 (MQ=255)
                                                                                       tgtgCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCAt  >  1:80719/1‑93 (MQ=255)
                                                                                       tgtgCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCAt  <  2:1263487/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTACCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCAT  >  NC_000913/4300813‑4300992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 229 total aligned reads displayed.
GCCGTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTACCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATGGCA  >  NC_000913/4300810‑4300996
                                                                                             |                                                                                             
GCCGTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTG                                                                                               <  SRR4302543.2697008/94‑1 (MQ=60)
  CGTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCC                                                                                             >  SRR4302543.4626396/1‑94 (MQ=60)
   GTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCT                                                                                            <  SRR4302543.1107682/94‑1 (MQ=60)
   GTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCT                                                                                            <  SRR4302543.1822796/94‑1 (MQ=60)
   GTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCT                                                                                            >  SRR4302543.5672741/1‑94 (MQ=60)
   GTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCT                                                                                            <  SRR4302543.3683943/94‑1 (MQ=60)
   GTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCT                                                                                            <  SRR4302543.3296852/94‑1 (MQ=60)
   GTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCT                                                                                            <  SRR4302543.1290391/94‑1 (MQ=60)
    TCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTG                                                                                           <  SRR4302543.1548621/94‑1 (MQ=60)
    TCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTG                                                                                           <  SRR4302543.3413777/94‑1 (MQ=60)
      ATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAG                                                                                         >  SRR4302543.4059218/1‑94 (MQ=60)
      ATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAG                                                                                         >  SRR4302543.4928694/1‑94 (MQ=60)
      ATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAG                                                                                         <  SRR4302543.4792137/94‑1 (MQ=60)
       TCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGC                                                                                        <  SRR4302543.814687/94‑1 (MQ=60)
        CCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCG                                                                                       >  SRR4302543.6465214/1‑94 (MQ=60)
        CCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCG                                                                                       <  SRR4302543.5750745/94‑1 (MQ=60)
        CCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCG                                                                                       <  SRR4302543.1253563/94‑1 (MQ=60)
        CCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCG                                                                                       <  SRR4302543.7456701/94‑1 (MQ=60)
          GGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAA                                                                                     >  SRR4302543.5507750/1‑94 (MQ=60)
            TAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATA                                                                                   >  SRR4302543.765078/1‑94 (MQ=60)
              GCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATT                                                                                 <  SRR4302543.1717840/94‑1 (MQ=60)
               CACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTT                                                                                >  SRR4302543.2535178/1‑94 (MQ=60)
               CACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTT                                                                                >  SRR4302543.5192555/1‑94 (MQ=60)
               CACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTT                                                                                <  SRR4302543.5383640/94‑1 (MQ=60)
                ACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTT                                                                               <  SRR4302543.2754736/94‑1 (MQ=60)
                ACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTT                                                                               <  SRR4302543.3242936/94‑1 (MQ=60)
                ACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTT                                                                               <  SRR4302543.7054810/94‑1 (MQ=60)
                   CCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCA                                                                            >  SRR4302543.1667520/1‑94 (MQ=60)
                   CCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCA                                                                            <  SRR4302543.4347290/94‑1 (MQ=60)
                   CCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCA                                                                            <  SRR4302543.1901961/94‑1 (MQ=60)
                    CGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAG                                                                           >  SRR4302543.6853654/1‑94 (MQ=60)
                    CGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAG                                                                           <  SRR4302543.7491067/94‑1 (MQ=60)
                    CGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAG                                                                           >  SRR4302543.7233549/1‑94 (MQ=60)
                    CGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAG                                                                           >  SRR4302543.3562794/1‑94 (MQ=60)
                      TAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGAT                                                                         >  SRR4302543.2811524/1‑94 (MQ=60)
                      TAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGAT                                                                         <  SRR4302543.2102379/94‑1 (MQ=60)
                       AGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATC                                                                        >  SRR4302543.4811640/1‑94 (MQ=60)
                       AGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATC                                                                        <  SRR4302543.7449776/94‑1 (MQ=60)
                       AGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATC                                                                        >  SRR4302543.4134697/1‑94 (MQ=60)
                       AGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATC                                                                        >  SRR4302543.7542983/1‑94 (MQ=60)
                       AGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATC                                                                        <  SRR4302543.580625/94‑1 (MQ=60)
                        GCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCG                                                                       <  SRR4302543.2601026/94‑1 (MQ=60)
                        GCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCG                                                                       <  SRR4302543.2786176/94‑1 (MQ=60)
                        GCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCG                                                                       >  SRR4302543.2307732/1‑94 (MQ=60)
                        GCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCG                                                                       <  SRR4302543.843584/94‑1 (MQ=60)
                        GCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCG                                                                       <  SRR4302543.6237760/94‑1 (MQ=60)
                        GCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCG                                                                       <  SRR4302543.584674/94‑1 (MQ=60)
                         CCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGG                                                                      <  SRR4302543.4194038/94‑1 (MQ=60)
                          CAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGT                                                                     >  SRR4302543.7761494/1‑94 (MQ=60)
                          CAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGT                                                                     >  SRR4302543.6918940/1‑94 (MQ=60)
                          CAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGT                                                                     <  SRR4302543.438082/94‑1 (MQ=60)
                          CAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGT                                                                     >  SRR4302543.7223323/1‑94 (MQ=60)
                          CAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGT                                                                     <  SRR4302543.7824174/94‑1 (MQ=60)
                          CAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGT                                                                     >  SRR4302543.369577/1‑94 (MQ=60)
                          CAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGT                                                                     >  SRR4302543.4133906/1‑94 (MQ=60)
                           AATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTT                                                                    <  SRR4302543.1197895/94‑1 (MQ=60)
                           AATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTT                                                                    <  SRR4302543.2511373/94‑1 (MQ=60)
                           AATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTT                                                                    <  SRR4302543.4847493/94‑1 (MQ=60)
                            ATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTT                                                                   <  SRR4302543.4368580/94‑1 (MQ=60)
                            ATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTT                                                                   >  SRR4302543.3321218/1‑94 (MQ=60)
                            ATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTT                                                                   <  SRR4302543.2537018/94‑1 (MQ=60)
                            ATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTT                                                                   <  SRR4302543.4867325/94‑1 (MQ=60)
                             TCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTC                                                                  <  SRR4302543.6568842/94‑1 (MQ=60)
                             TCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTC                                                                  <  SRR4302543.7897047/94‑1 (MQ=60)
                               GAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGC                                                                >  SRR4302543.5733853/1‑94 (MQ=60)
                               GAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCAACAGGCGAATCGTTGCGGGTGGGCCTGGGCGAATATTTTTCAGATCGGTTTCGC                                                                >  SRR4302543.4827606/1‑94 (MQ=60)
                                AATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCG                                                               <  SRR4302543.2077289/94‑1 (MQ=60)
                                AATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCG                                                               >  SRR4302543.1430666/1‑94 (MQ=60)
                                AATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCG                                                               >  SRR4302543.4452790/1‑94 (MQ=60)
                                AATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCG                                                               <  SRR4302543.467279/94‑1 (MQ=60)
                                AATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAAAGGTGGGGGGGGTGCGTGAGCGAATATATTTCAGATCGGTTTCGCG                                                               >  SRR4302543.1430665/1‑94 (MQ=60)
                                 ATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGG                                                              <  SRR4302543.5678614/94‑1 (MQ=60)
                                  TCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGA                                                             >  SRR4302543.1286697/1‑94 (MQ=60)
                                   CCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAA                                                            <  SRR4302543.3870919/94‑1 (MQ=60)
                                     ACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGT                                                          >  SRR4302543.4111146/1‑94 (MQ=60)
                                     ACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGT                                                          <  SRR4302543.3676081/94‑1 (MQ=60)
                                      CTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTT                                                         >  SRR4302543.2173332/1‑94 (MQ=60)
                                      CTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTT                                                         <  SRR4302543.6719027/94‑1 (MQ=60)
                                      CTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTT                                                         <  SRR4302543.4612461/94‑1 (MQ=60)
                                      CTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTT                                                         >  SRR4302543.2541487/1‑94 (MQ=60)
                                        TTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGG                                                       >  SRR4302543.4041649/1‑94 (MQ=60)
                                         TACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGC                                                      <  SRR4302543.1986531/94‑1 (MQ=60)
                                          ACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCG                                                     >  SRR4302543.6423668/1‑94 (MQ=60)
                                          ACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCG                                                     >  SRR4302543.2694628/1‑94 (MQ=60)
                                           CCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGA                                                    >  SRR4302543.5901133/1‑94 (MQ=60)
                                           CCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGA                                                    >  SRR4302543.7460134/1‑94 (MQ=60)
                                           CCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGA                                                    <  SRR4302543.749845/94‑1 (MQ=60)
                                            CCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGAT                                                   <  SRR4302543.4813258/94‑1 (MQ=60)
                                            CCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGAT                                                   <  SRR4302543.4751168/94‑1 (MQ=60)
                                            CCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGGTGGCGAT                                                   >  SRR4302543.1896476/1‑94 (MQ=60)
                                             CTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATC                                                  >  SRR4302543.1058770/1‑94 (MQ=60)
                                             CTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATC                                                  >  SRR4302543.5614563/1‑94 (MQ=60)
                                              TCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCA                                                 >  SRR4302543.7760325/1‑94 (MQ=60)
                                               CGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCAC                                                >  SRR4302543.5377920/1‑94 (MQ=60)
                                               CGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCAC                                                <  SRR4302543.4602387/94‑1 (MQ=60)
                                               CGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCAC                                                <  SRR4302543.5900837/94‑1 (MQ=60)
                                               CGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCAC                                                <  SRR4302543.1225482/94‑1 (MQ=60)
                                                GAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACA                                               <  SRR4302543.7247204/94‑1 (MQ=60)
                                                 AAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACAT                                              <  SRR4302543.7544298/94‑1 (MQ=60)
                                                 AAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACAT                                              <  SRR4302543.4226029/94‑1 (MQ=60)
                                                 AAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACAT                                              >  SRR4302543.4305871/1‑94 (MQ=60)
                                                   AGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATAC                                            <  SRR4302543.3001910/94‑1 (MQ=60)
                                                    GTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTAGCGGAAGTTGGCGATCACATACC                                           >  SRR4302543.4997130/1‑94 (MQ=60)
                                                      TTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAG                                         <  SRR4302543.7458036/94‑1 (MQ=60)
                                                      TTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAG                                         >  SRR4302543.442201/1‑94 (MQ=60)
                                                      TTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAG                                         <  SRR4302543.4616716/94‑1 (MQ=60)
                                                       TTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGT                                        <  SRR4302543.371524/94‑1 (MQ=60)
                                                       TTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGT                                        <  SRR4302543.2731339/94‑1 (MQ=60)
                                                       TTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGT                                        <  SRR4302543.2083865/94‑1 (MQ=60)
                                                       TTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGT                                        <  SRR4302543.7753537/94‑1 (MQ=60)
                                                        TGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGCATATTTTTCAGATCGGTTTTGCGGAAGTTGGCGATCACATACCAGTG                                       >  SRR4302543.7191163/1‑94 (MQ=60)
                                                        TGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTG                                       <  SRR4302543.2325854/94‑1 (MQ=60)
                                                        TGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTG                                       <  SRR4302543.7750455/94‑1 (MQ=60)
                                                        TGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTG                                       >  SRR4302543.189581/1‑94 (MQ=60)
                                                        TGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTG                                       >  SRR4302543.2293094/1‑94 (MQ=60)
                                                        TGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTG                                       >  SRR4302543.8657/1‑94 (MQ=60)
                                                        TGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTG                                       <  SRR4302543.4332280/94‑1 (MQ=60)
                                                        TGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTG                                       >  SRR4302543.7191164/1‑94 (MQ=60)
                                                         GCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGC                                      >  SRR4302543.3794323/1‑94 (MQ=60)
                                                         GCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGA                                      >  SRR4302543.5536337/1‑94 (MQ=60)
                                                          GCGCTGTCACTCATGAGGCGAATCGTTGCGGGGGTGCCTGAGCGAATATTTTTCAGATCGTTTTCGCGGAAGTTGGCGATCACATACCAGTGAC                                     <  SRR4302543.2467096/94‑1 (MQ=60)
                                                          CCGCTGTCACTCATCAGGAGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGAC                                     <  SRR4302543.6972887/94‑1 (MQ=60)
                                                           CGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACG                                    <  SRR4302543.3032372/94‑1 (MQ=60)
                                                            GCTGTCACTCATCAGGCGAATCTTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGG                                   >  SRR4302543.1412390/1‑94 (MQ=60)
                                                            GCTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGA                                   >  SRR4302543.5157492/1‑94 (MQ=60)
                                                             CTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAG                                  <  SRR4302543.185176/94‑1 (MQ=60)
                                                             CTGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAG                                  >  SRR4302543.4792221/1‑94 (MQ=60)
                                                              TGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGT                                 <  SRR4302543.394052/94‑1 (MQ=60)
                                                              TGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGT                                 <  SRR4302543.7667591/94‑1 (MQ=60)
                                                              TGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGT                                 >  SRR4302543.3453169/1‑94 (MQ=60)
                                                              TGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGT                                 <  SRR4302543.7667592/94‑1 (MQ=60)
                                                              TGTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGT                                 <  SRR4302543.7924811/94‑1 (MQ=60)
                                                               GTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTG                                <  SRR4302543.1082886/94‑1 (MQ=60)
                                                               GTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTG                                >  SRR4302543.1638509/1‑94 (MQ=60)
                                                               GTCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTG                                >  SRR4302543.7225447/1‑94 (MQ=60)
                                                                TCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGT                               <  SRR4302543.3539942/94‑1 (MQ=60)
                                                                TCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGT                               >  SRR4302543.3767452/1‑94 (MQ=60)
                                                                TCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGT                               >  SRR4302543.480175/1‑94 (MQ=60)
                                                                TCACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGT                               <  SRR4302543.1576949/94‑1 (MQ=60)
                                                                 CACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTC                              >  SRR4302543.88620/1‑94 (MQ=60)
                                                                  ACTCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCG                             <  SRR4302543.6130362/94‑1 (MQ=60)
                                                                    TCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGAT                           >  SRR4302543.2381181/1‑94 (MQ=60)
                                                                    TCATCAGGCGAATCGTTGCGGGGGTGCCTGAGCGAATATTTTTCAGATCGGCTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGGCGAT                           >  SRR4302543.1667975/1‑94 (MQ=60)
                                                                    CCATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGAT                           <  SRR4302543.1405256/94‑1 (MQ=60)
                                                                     CATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATT                          <  SRR4302543.4139363/94‑1 (MQ=60)
                                                                     CATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATT                          >  SRR4302543.6426739/1‑94 (MQ=60)
                                                                     CATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATT                          <  SRR4302543.2655043/94‑1 (MQ=60)
                                                                     CATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATT                          <  SRR4302543.2796315/94‑1 (MQ=60)
                                                                      ATCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTA                         <  SRR4302543.3736808/94‑1 (MQ=60)
                                                                       TCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAG                        <  SRR4302543.1137784/94‑1 (MQ=60)
                                                                       TCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAG                        <  SRR4302543.5405473/94‑1 (MQ=60)
                                                                       TCAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAG                        <  SRR4302543.3408609/94‑1 (MQ=60)
                                                                        CAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGG                       >  SRR4302543.1548554/1‑94 (MQ=60)
                                                                        CAGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTAACGAGTGTCGATTAGG                       >  SRR4302543.1241092/1‑94 (MQ=60)
                                                                         AGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTTAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGG                      >  SRR4302543.4258127/1‑94 (MQ=60)
                                                                         AGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGG                      <  SRR4302543.2122551/94‑1 (MQ=60)
                                                                         AGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGG                      <  SRR4302543.2122552/94‑1 (MQ=60)
                                                                         AGGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGG                      >  SRR4302543.2369438/1‑94 (MQ=60)
                                                                          TGCGAAGCGTTGCGGGTGTGCCTGAGCGAATATTTGTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGT                     <  SRR4302543.2839104/94‑1 (MQ=60)
                                                                          GTCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGT                     <  SRR4302543.5685405/94‑1 (MQ=60)
                                                                          GGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGT                     <  SRR4302543.6581121/94‑1 (MQ=60)
                                                                          GGCGAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGT                     <  SRR4302543.6158317/94‑1 (MQ=60)
                                                                             GAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAA                  <  SRR4302543.4646566/94‑1 (MQ=60)
                                                                             GAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAA                  >  SRR4302543.3760093/1‑94 (MQ=60)
                                                                             GAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAA                  <  SRR4302543.6740505/94‑1 (MQ=60)
                                                                             GAATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAA                  <  SRR4302543.2113530/94‑1 (MQ=60)
                                                                              AATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAA                 <  SRR4302543.5576098/94‑1 (MQ=60)
                                                                              AATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAA                 >  SRR4302543.5698380/1‑94 (MQ=60)
                                                                              AATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAA                 >  SRR4302543.4411813/1‑94 (MQ=60)
                                                                              AATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAA                 <  SRR4302543.1523668/94‑1 (MQ=60)
                                                                               ATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTGGGGTAAAAA                >  SRR4302543.6186671/1‑94 (MQ=60)
                                                                               ATCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAA                >  SRR4302543.6186670/1‑94 (MQ=60)
                                                                                TCGTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAAT               <  SRR4302543.458820/94‑1 (MQ=60)
                                                                                  GTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAG             >  SRR4302543.7391345/1‑94 (MQ=60)
                                                                                  GTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAG             <  SRR4302543.475734/94‑1 (MQ=60)
                                                                                  GTTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAG             <  SRR4302543.1016302/94‑1 (MQ=60)
                                                                                   TTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGG            <  SRR4302543.1443517/94‑1 (MQ=60)
                                                                                   TTGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGG            <  SRR4302543.5579967/94‑1 (MQ=60)
                                                                                    TGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGG           <  SRR4302543.7949366/94‑1 (MQ=60)
                                                                                    TGCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGG           <  SRR4302543.894564/94‑1 (MQ=60)
                                                                                     GCGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGC          >  SRR4302543.1529245/1‑94 (MQ=60)
                                                                                      CGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCG         <  SRR4302543.6518488/94‑1 (MQ=60)
                                                                                      CGGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCG         >  SRR4302543.1293010/1‑94 (MQ=60)
                                                                                       GGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGC        >  SRR4302543.5608663/1‑94 (MQ=60)
                                                                                       GGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGC        <  SRR4302543.1915110/94‑1 (MQ=60)
                                                                                       GGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGC        >  SRR4302543.3890064/1‑94 (MQ=60)
                                                                                       GGGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGC        >  SRR4302543.3138775/1‑94 (MQ=60)
                                                                                        GGTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCA       >  SRR4302543.2850884/1‑94 (MQ=60)
                                                                                         GTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCAT      <  SRR4302543.6980892/94‑1 (MQ=60)
                                                                                         GTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCAT      <  SRR4302543.7819047/94‑1 (MQ=60)
                                                                                         GTGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCAT      >  SRR4302543.81464/1‑94 (MQ=60)
                                                                                          TGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATG     <  SRR4302543.6696038/94‑1 (MQ=60)
                                                                                          TGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATG     <  SRR4302543.1240811/94‑1 (MQ=60)
                                                                                          TGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATG     <  SRR4302543.4631717/94‑1 (MQ=60)
                                                                                          TGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATG     >  SRR4302543.4795923/1‑94 (MQ=60)
                                                                                          TGTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATG     <  SRR4302543.490562/94‑1 (MQ=60)
                                                                                           GTGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATGG    <  SRR4302543.1046810/94‑1 (MQ=60)
                                                                                            TGCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTTGGGTAAAAATAGGGCGCATGGC   >  SRR4302543.2314542/1‑94 (MQ=60)
                                                                                             GCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATGGCA  >  SRR4302543.2360156/1‑94 (MQ=60)
                                                                                             GCCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATGGCA  >  SRR4302543.5000351/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCCGTCATCCGGTAGCACGCCGTAGCCAATCGAATCCACTTTACCCTCGAAGGTTTTGCCGCTGTCACTCATCAGGCGAATCGTTGCGGGTGTACCTGAGCGAATATTTTTCAGATCGGTTTCGCGGAAGTTGGCGATCACATACCAGTGACGAGTGTCGATTAGGGTAAAAATAGGGCGCATGGCA  >  NC_000913/4300810‑4300996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: